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A global database of soil microbial phospholipid fatty acids and enzyme activities

Soil microbes drive ecosystem function and play a critical role in how ecosystems respond to global change. Research surrounding soil microbial communities has rapidly increased in recent decades, and substantial data relating to phospholipid fatty acids (PLFAs) and potential enzyme activity have been collected and analysed. However, studies have mostly been restricted to local and regional scales, and their accuracy and usefulness are limited by the extent of accessible data. Here we aim to improve data availability by collating a global database of soil PLFA and potential enzyme activity measurements from 12,258 georeferenced samples located across all continents, 5.1% of which have not previously been published. The database contains data relating to 113 PLFAs and 26 enzyme activities, and includes metadata such as sampling date, sample depth, and soil pH, total carbon, and total nitrogen. This database will help researchers in conducting both global- and local-scale studies to better understand soil microbial biomass and function.

Scientific Data

A deep dive into subduction zones and the Japan Trench

Deep beneath the ocean, giant slabs of rock slide beneath one another in areas called subduction zones. These powerful movements shape the planet by building mountains, creating fiery volcanoes, and even causing huge earthquakes. Scientists study subduction zones to understand why these natural events happen and where and how they might occur so we can be better prepared. One important subduction zone is the Japan Trench, where a big earthquake happened in 2011. To learn more about subduction zones, scientists go on ocean drilling expeditions. They sail on research ships, drill into the seafloor, and collect rock samples. These samples help scientists understand what happened in the past and how subduction zones work. In turn, this information helps communities better understand and prepare for future earthquakes.

Frontiers for Young Minds

PFAS sampling activities in the U.S. Geological Survey national networks

Per- and polyfluoroalkyl substances (PFAS), frequently called “forever chemicals,” are used for a wide variety of industrial purposes and are often found in common household and industrial items such as firefighting foams, non-stick cookware, and water-resistant materials. The contamination of water, air, and soil by PFAS is a national and global issue due to their widespread occurrence in multiple applications and resistance to biodegradation and other traditional treatment processes. Research indicates that many PFAS can be emitted to the atmosphere and transported and deposited long distances from the source. The U.S. Geological Survey (USGS) Water Resources Mission Area received funding to implement a national-scale sampling effort to assess PFAS occurrence. To follow agency directives, the National Water Quality Network (NWQN) added PFAS sample monitoring for both surface water and groundwater, and also added PFAS monitoring to selected sites in the National Atmospheric Deposition Program (NADP).

General Information Product

Permafrost–wildfire interactions: active layer thickness estimates for paired burned and unburned sites in northern high latitudes

As the northern high-latitude permafrost zone experiences accelerated warming, permafrost has become vulnerable to widespread thaw. Simultaneously, wildfire activity across northern boreal forest and Arctic/subarctic tundra regions impacts permafrost stability through the combustion of insulating organic matter, vegetation, and post-fire changes in albedo. Efforts to synthesis the impacts of wildfire on permafrost are limited and are typically reliant on antecedent pre-fire conditions. To address this, we created the FireALT dataset by soliciting data contributions that included thaw depth measurements, site conditions, and fire event details with paired measurements at environmentally comparable burned and unburned sites. The solicitation resulted in 52 466 thaw depth measurements from 18 contributors across North America and Russia. Because thaw depths were taken at various times throughout the thawing season, we also estimated end-of-season active layer thickness (ALT) for each measurement using a modified version of the Stefan equation. Here, we describe our methods for collecting and quality-checking the data, estimating ALT, the data structure, strengths and limitations, and future research opportunities. The final dataset includes 48 669 ALT estimates with 32 attributes across 9446 plots and 157 burned–unburned pairs spanning Canada, Russia, and the United States. The data span fire events from 1900 to 2022 with measurements collected from 2001 to 2023. The time since fire ranges from 0 to 114 years. The FireALT dataset addresses a key challenge: the ability to assess impacts of wildfire on ALT when measurements are taken at various times throughout the thaw season depending on the time of field campaigns (typically June through August) by estimating ALT at the end-of-season maximum. This dataset can be used to address understudied research areas, particularly algorithm development, calibration, and validation for evolving process-based models as well as extrapolating across space and time, which could elucidate permafrost–wildfire interactions under accelerated warming across the high-northern-latitude permafrost zone. The FireALT dataset is available through the Arctic Data Center ( https://doi.org/10.18739/A2RN3092P , Talucci et al., 2024).

Arctic

Aftershock forecasting

Aftershocks can compound the impacts of a major earthquake, disrupting recovery efforts and potentially further damaging weakened buildings and infrastructure. Forecasts of the probability of aftershocks can therefore aid decision-making during earthquake response and recovery. Several countries issue authoritative aftershock forecasts. Most aftershock forecasts are based on simple statistical models that were first developed in the 1980s and remain the best available models. We review these statistical models, and the wide-ranging research to advance aftershock forecasting through better statistical, physical, and machine learning methods. Physics-based forecasts based on mainshock stress changes can sometimes match the statistical models in testing, but don’t yet outperform them. Physical models are also hampered by unsolved problems such as the mechanics of dynamic triggering and the influence of background conditions. Initial work on machine learning forecasts shows promise, and new machine learning earthquake catalogs provide an opportunity to advance all types of aftershock forecasts.

Annual Review of Earth and Planetary Sciences

Declining groundwater storage expected to amplify mountain streamflow reductions in a warmer world

Groundwater interactions with mountain streams are often simplified in model projections, potentially leading to inaccurate estimates of streamflow response to climate change. Here, using a high-resolution, integrated hydrological model extending 400 m into the subsurface, we find groundwater an important and stable source of historical streamflow in a mountainous watershed of the Colorado River. In a warmer climate, increased forest water use is predicted to reduce groundwater recharge resulting in groundwater storage loss. Losses are expected to be most severe during dry years and cannot recover to historical levels even during simulated wet periods. Groundwater depletion substantially reduces annual streamflow with intermittent conditions predicted when precipitation is low. Expanding results across the region suggests groundwater declines will be highest in the Colorado Headwater and Gunnison basins. Our research highlights the tight coupling of vegetation and groundwater dynamics and that excluding explicit groundwater response to warming may underestimate future reductions in mountain streamflow.

Nature Water

Seamless Geologic Map Database for the Intermountain West, United States: A foundational dataset for mineral systems analysis

The Intermountain West has a complex geologic history, resulting in the formation of a diverse array of mineral deposits. Effective mineral exploration requires understanding the spatial and temporal relationships among geologic processes and events, a key focus of the mineral systems approach to exploration. This paper presents the Intermountain West Seamless Geologic Map Database, a unified dataset designed to support mineral exploration. Integrating geologic provinces, structural settings, and hydrothermal alteration, the database leverages the Seamless Integrated Geologic Mapping (SIGMa) extension to the USGS Geologic Map Schema (GeMS) to standardize geologic data from varied sources. SIGMa's hierarchical stratigraphic organization and feature-level metadata enhance data interoperability and reusability, enabling seamless query, analysis, and visualization of lithology, structural features, mineral deposits, geochronology, hydrothermal alteration. volcanic activity, and By providing a regionally consistent and dynamically evolving geologic map, this database provides a foundational framework for mineral exploration and geologic research. It also allows for an efficient workflow that expedites the publication of integrated geologic map databases.

Conference Paper

Airborne geophysical efforts for critical mineral systems mapping in the southern Midcontinent, USA

The increasing global demand for critical minerals to support energy and technological advancement has accelerated exploration and research efforts for these essential resources. Since 2019, the United States Geological Survey (USGS) Earth Mapping Resources Initiative (EMRI) has worked to modernize geologic mapping of the Nation to better understand its critical mineral resources. To further this initiative, the USGS has flown a series of high-resolution airborne magnetic and radiometric surveys over large areas of the southern Midcontinent. The surveys cover known critical mineral deposits and areas with the potential to host additional critical minerals based on the presence of one or more overlapping mineral systems. One aspect of EMRI emphasizes close collaboration between the USGS and the Association of American State Geologists, as well as other government and industry partners to leverage geophysical, geological, and geochemical expertise on both regional and local scales. The EMRI high-resolution airborne survey data provide new insights into the geophysical framework of the southern Midcontinent and its critical mineral endowment. Additionally, discoveries made from the data have directed new studies for critical mineral exploration.

southern Midcontinent

Colored shaded-relief bathymetry and acoustic backscatter of Lake Sammamish, Washington

Evidence of strong earthquakes (such as underwater landslides and associated deposits) may be recorded within the lacustrine sediments of Pacific Northwest lakes. The floor of Lake Sammamish, Wash., an approximately 11 kilometer (6.8 mile) long, 2 kilometer (1.2 mile) wide, and 35 meter (114.8 feet) deep lake located in a populated region just east of Seattle, was mapped by the U.S. Geological Survey in November of 2021 to search for evidence of past earthquakes. Mapping was conducted using a SWATHplus-M 234-kHz interferometric side-scan sonar system was pole-mounted on the U.S. Geological Survey research vessel Parke Snavely, and the system collected full-coverage bathymetric and acoustic backscatter data, which were processed to 2-meter spatial resolution. Two maps were created, a colored shaded-relief bathymetric map showing lake floor morphology (sheet 1), and an acoustic-backscatter map showing backscatter intensities (sheet 2). The results may then be utilized together to investigate past earthquake activity.

Washington

Guidelines for producing integrated 210Pb and 14C age-models

Accurate reconstructions of past environmental changes are crucial in paleoecological research and require reliable chronologies of sedimentary archives. Establishing robust age-models and obtaining the most appropriate proxies for analysis is a complex scientific endeavor, requiring extensive resources and collaboration among specialists, including radiochronologists. Radiometric dating methods, such as 210 Pb and radiocarbon ( 14 C), are frequently employed to establish chronologies in aquatic sedimentary deposits and peat bogs. In this study, we review key aspects of sampling, analysis, and the principles underlying 210 Pb and 14 C age-models, focusing on methods for developing robust joint chronologies for paleoenvironmental research. Drawing largely from the authors' experiences and group discussions during and after a scientific workshop in 2022, we discuss important considerations for site selection, sampling strategies, and radiometric dating to construct integrated 210 Pb and 14 C age-models. Using expert consensus, this group – called Paleostats – aims to provide a set of best practices for other geochronologists with this methods paper. Among our conclusions, we emphasize the importance of accounting for site-specific factors such as prior information on sedimentation rates to establish appropriate sampling and analytical strategies. The use of appropriate coring devices can minimize disturbance to sediments and ensure the core surface remains intact and preserved until sectioning. Where excess 210 Pb is expected, sectioning at intervals of ≤1 cm provides an adequate sampling resolution for 210 Pb dating. Exceptions are possible, allowing for ~2–3 cm sections in areas with confirmed high sedimentation rates (e.g., > 1 cm yr −1 ). Recovering deeper core sections for 14 C dating with sufficient overlap allows for accounting errors in depth estimates made in the field. Special attention is advised during time intervals where validation proxies, such as the human-made radionuclides 137 Cs or post-bomb 14 C, are expected, and to determine the depth of secular equilibrium between 210 Pb and 226 Ra. Radiocarbon analyses are commonly performed by accelerator mass spectrometry, and age models are constructed mainly using Bayesian statistics with Markov Chain Monte Carlo techniques (e.g., Bacon ). A Bayesian approach ( Plum ) is now available for producing 210 Pb age-models, which infers the 210 Pb ex flux, eliminates the need for selecting an equilibrium depth, and allows dating cores with incomplete 210 Pb ex inventory. Plum offers improved chronologies by integrating raw 210 Pb and 14 C data, and these age-models can be enriched with other dating methodologies, such as identifying tephras and other well-recorded historical events. Harmonized reporting would contribute to making radiometric age-models reproducible, which would benefit from an international effort. Using 210 Pb and 14 C to produce integrated age-models may yield better insights into the interplay between natural and recent anthropogenic forcings on ecosystems. This can enhance our understanding of environmental processes and their impacts on climate change, ultimately supporting science-based assessments and decisions.

Earth-Science Reviews

Extracting data from maps: Lessons learned from the artificial intelligence for critical mineral assessment competition

The U.S. Geological Survey (USGS), Defense Advanced Projects Research Agency (DARPA), NASA Jet Propulsion Laboratory (JPL), and MITRE ran a 12-week machine learning competition aimed at accelerating development of AI tools for critical mineral assessments. The Artificial Intelligence for Critical Mineral Assessment Competition solicited innovative solutions for two challenges: 1) automated georeferencing of historical maps, and 2) automated feature extraction from historical maps. Competitors used a new dataset of historical map images to train, validate, and evaluate their models. Automated georeferencing pipelines attained a median root-mean square error of 1.1 km. Prompt-based extraction (i.e., with user input) of polygons, polylines, and points from geologic maps yielded median F1-scores of 0.77, 0.56, 0.35, respectively. Geologic maps pose numerous challenges for AI workflows because they vary significantly. However, despite its short duration, the competition yielded promising results that have since spurred further innovation in this area and led to the development of new AI tools to semi-automate key, time-consuming parts of the assessment workflow.

Applied Computing and Geosciences

Introduction to the special section on improving measurements of earthquake source parameters

Earthquake source parameters such as magnitude, seismic moment, source dimension, stress drop, and radiated energy are fundamental to understanding earthquake physics, and are also key ingredients in earthquake ground‐motion modeling, rupture simulation, and statistical seismology. However, the uncertainties in these parameters estimated from the radiated seismic wavefield are large due to variability in approaches, including site and attenuation characterizations, and so estimates for an individual earthquake made by different studies can vary greatly. Estimating spectral source parameters remains a popular topic, due to a combination of their intrinsic importance and their apparent ease of measurement, but also a controversial one, due to many sources of variability and large uncertainty. The available methods coupled with necessary parameter choices and assumptions in the analysis make it challenging for researchers to apply methods or understand the reliability in results or reported source parameters. This Special Section on Improving Measurements of Earthquake Source Parameters showcasing comparisons between methods and studies seeks to alleviate some of these difficulties to help the community identify the important components and trade‐offs of decomposing recorded seismograms into their source, path, and site components.

Bulletin of the Seismological Society of America

Sedimentary exhalative (sedex) zinc-lead-silver deposit model

This report draws on previous syntheses and basic research studies of sedimentary exhalative (sedex) deposits to arrive at the defining criteria, both descriptive and genetic, for sedex-type deposits. Studies of the tectonic, sedimentary, and fluid evolution of modern and ancient sedimentary basins have also been used to select defining criteria. The focus here is on the geologic characteristics of sedex deposit-hosting basins that contain greater than 10 million metric tons of zinc and lead. The enormous size of sedex deposits strongly suggests that basin-scale geologic processes are involved in their formation. It follows that mass balance constraints of basinal processes can provide a conceptual underpinning for the evaluation of potential ore-forming mechanisms and the identification of geologic indicators for ore potential in specific sedimentary basins. Empirical data and a genetic understanding of the physicochemical, geologic, and mass balance conditions required for each of these elements are used to establish a hierarchy of quantifiable geologic criteria that can be used in U.S. Geological Survey national assessments. In addition, this report also provides a comprehensive evaluation of environmental considerations associated with the mining of sedex deposits.

Scientific Investigations Report

The SCEC/USGS community stress drop validation study using the 2019 Ridgecrest earthquake sequence

We introduce a community stress drop validation study using the 2019 Ridgecrest, California, earthquake sequence, in which researchers are invited to use a common dataset to independently estimate comparable measurements using a variety of methods. Stress drop is the change in average shear stress on a fault during earthquake rupture, and as such is a key parameter in many ground motion, rupture simulation, and source physics problems in earthquake science. Spectral stress drop is commonly estimated by fitting the shape of the radiated energy spectrum, yet estimates for an individual earthquake made by different studies can vary hugely. In this community study, sponsored jointly by the U. S. Geological Survey and Southern/Statewide California Earthquake Center, we seek to understand the sources of variability and uncertainty in earthquake stress drop through quantitative comparison of submitted stress drops. The publicly available dataset consists of nearly 13,000 earthquakes of M1 to 7 from two weeks of the 2019 Ridgecrest sequence recorded on stations within 1-degree. As a community study, findings are shared through workshops and meetings and all are invited to join at any time, at any interest level.

Seismica

Groundwater spatial variability within an atoll island: Assessing shallow aquifer heterogeneity with geophysical and physicochemical measurements

This study examines the spatial variability of shallow groundwater on Dhigelaabadhoo Island using electromagnetic induction surveys, groundwater monitoring, and sediment analyses. The research reveals how variations in island morphology—such as differences in elevation, reef flat width, and sediment composition—affect the spatial distribution of groundwater lenses and the overall aquifer dynamics. Saltwater intrusion is especially pronounced in low elevated areas, with narrow reef flat plate and areas where higher hydraulic conductivity—driven by the presence of coarser sediments—is observed, whereas regions characterized by finer sediments, higher elevation, and wider reef flat plates tend to support more symmetric and less saline groundwater lenses. The geophysical investigations reveal that tidal oscillations alter groundwater movement by markedly changing water levels and conductivity, thereby underscoring the critical need to account for temporal dynamics in atoll coastal aquifer systems and the importance of integrating tidal dynamics into the aquifer zone. The findings highlight the significant role of intrinsic morphological and external hydrodynamic factors in shaping groundwater distribution on atoll islands, offering critical insights for sustainable freshwater resource management.

Dhigelaabadhoo Island

Quantitative risk of earthquake disruption to global copper and rhenium supply

Earthquakes have the potential to substantially affect mining operations, potentially leading to supply chain disruptions and adversely affecting the global economy. This study explores the quantification of earthquake risk to copper and rhenium commodity supply by examining the spatial concentration of high earthquake hazard areas and the commodity-specific mining, smelting, and refining operations across the globe. Because many of the largest facilities are concentrated geographically near the highly seismic regions of South America, East Asia, and the Pacific, there is a potential for cascading effects on the entire supply chain. The analysis indicates that the expected annual disruption of global production is 0.3–1.1 percent for copper mines, 1.8–4.0 percent for smelters, and 1.5–3.3 percent for refineries. Expected annual disruption of global rhenium production capacity is 0.32–1.32 percent. The research highlights that the potential lost revenue from earthquake disruptions is from $315 million to $1.29 billion for copper mining, $1.92 billion to $4.33 billion for copper smelting, $2.06 billion to $4.52 billion for copper refining, and $337,000 to $1.40 million for rhenium production capacity.

Open-File Report

Mitigating climate change by abating coal mine methane: A critical review of status and opportunities

Methane has a short atmospheric lifetime compared to carbon dioxide (CO 2 ), ∼decade versus ∼centuries, but it has a much higher global warming potential (GWP), highlighting how reducing methane emissions can slow the rate of climate change. When considering the contribution of greenhouse gas (GHG) emissions to current global warming (2010–2019) relative to the industrial revolution (1850–1900) levels, methane contributes 0.5 °C or ∼ a third of the total. The most recent post-2023 global estimates of methane emissions by bottom-up (BU) and top-down (TD) approaches for the coal mining sector are in the range of ∼41 ± 3 Tg yr −1 and 33 ± 5 Tg yr −1 , respectively. This divergence, notwithstanding overlapping confidence intervals, is a result of differences between applied TD global inversion models and BU emission inventories. Further research can help to better refine emissions from the various contributing coal mine methane (CMM) emissions sources. The coal mining sector accounts for over 10 % of global anthropogenic methane emissions. The contribution of CMM emissions to the global budget have increased since 2000, although upward and downward regional trends have been observed.

International Journal of Coal Geology

A synthesis engine for constructing geologic maps of the United States

The geologic history of the United States is cataloged in thousands of geologic maps produced during many decades. However, the disparate nature of these individual maps makes it challenging to assess resources, research geologic histories, or characterize natural hazards holistically across the Nation. The U.S. House of Representatives 2020 appropriations bill for the U.S. Department of the Interior (H.R. 116-100) requires the U.S. Geological Survey to “bring together detailed national and continental-resolution [two-dimensional] and [three-dimensional] information produced throughout the Survey and by [F]ederal and [S]tate partners.” In response to this directive, this report presents a compilation and synthesis of geologic maps across the United States in the form of a relational database. The synthesis database includes thematic maps that synthesize the Nation’s geology, and retains the original input maps as well as linkages to standardized vocabularies to aid the discoverability of geologic information. Specifically, the synthesis database is targeted toward producing four National-resolution maps for the conterminous United States: Quaternary geology, the geology at the Earth’s surface, pre-Quaternary geology, and Precambrian geology. In addition, the synthesis database includes the infrastructure necessary to expand to additional resolutions in the future.

conterminous United States