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At least 1,603 records · Page 89Linked to original sources
USGS2005

Hydrogeology and trichloroethene contamination in the sea-level aquifer beneath the Logistics Center, Fort Lewis, Washington

The U.S. Army disposed of waste trichloroethene (TCE) and other materials in the East Gate Disposal Yard near the Logistics Center on Fort Lewis, Washington, from the 1940s to the early 1970s. As a result, ground water contaminated with primarily TCE extends more than 3 miles downgradient from the East Gate Disposal Yard. The site is underlain by a complex and heterogeneous sequence of glacial and non-glacial deposits that have been broadly categorized into an upper and a lower aquifer (the latter referred to as the sea-level aquifer). TCE contamination was detected in both aquifers. This report describes an investigation by the U.S. Geological Survey (USGS) of the source, migration, and attenuation of TCE in the sea-level aquifer. A refined conceptual model for ground-water flow and contaminant migration into and through the sea-level aquifer was developed in large part from interpretation of environmental tracer data. The tracers used included stable isotopes of oxygen (18O), hydrogen (2H), and carbon (13C); the radioactive hydrogen isotope tritium (3H); common ions and redox-related analytes; chlorofluorocarbons; and sulfur hexafluoride. Tracer and TCE concentrations were determined for samples collected by the USGS from 37 wells and two surface-water sites in American Lake during 1999-2000. Ground-water levels were measured by the USGS in more than 40 wells during 2000-01, and were combined with measurements by the U.S. Army and others to create potentiometric-surface maps. Localized ground-water flow features were identified that are of particular relevance to the migration of TCE in the study area. A ridge of ground water beneath American Lake diverts the flow of TCE-contaminated ground water in the sea-level aquifer to the west around the southern end of the lake. Tracer data provided clear evidence that American Lake is a significant source of recharge to the sea-level aquifer that has created that ridge of ground water. High ground-water altitudes at locations north and northeast of the Logistics Center combined with the ridge beneath American Lake prevent TCE contaminated water beneath the Logistics Center from migrating toward municipal water-supply wells northeast of the site. The 1999-2000 TCE concentrations measured by the USGS at older wells screened in the sea-level aquifer were similar to those measured since 1995, but the known downgradient extent of the TCE contamination expanded nearly 2 miles after the Army installed and sampled new wells during 2003-04. Concentrations of TCE in the sea-level aquifer were consistently highest in the upper part of the aquifer throughout the plume, although TCE has spread throughout much of the thickness of the aquifer in the downgradient portions of the plume. Environmental tracer data indicated that the primary pathway for contaminant migration into the sea-level aquifer is through the previously identified confining unit window, an area where the predominately fine-grained confining unit is relatively coarse grained and more permeable. Other less substantial pathways for contaminant migration also were identified near the East Gate Disposal Yard and the I-5 pump-and-treat facilities. Those areas are near active pumping wells and ground-water reintroduction facilities, but there is no evidence that the contaminant migration was caused or enhanced by those activities. Within the sea-level aquifer, TCE concentrations continue to migrate westward in the flow field strongly influenced by ground-water recharge from American Lake. Historical data are not available to definitively determine if the 5-?g/L leading edge of the current TCE plume is stable or if it is still moving downgradient. However, an evaluation of the available data combined with TCE traveltime estimates indicates that the peak TCE concentrations in the sea-level aquifer may have not yet reached the wells near the currently defined leading edge of the plume. Hypothetically, the 5-?g/L leading edge

Scientific Investigations Report↗
USGS2005

Generalized water-level contours, September-October 2000 and March-April 2001, and long-term water-level changes, at the U.S. Air Force Plant 42 and vicinity, Palmdale, California

Historically, the U.S. Air Force Plant 42 has relied on ground water as the primary source of water owing, in large part, to the scarcity of surface water in the region. Groundwater withdrawal for municipal, industrial, and agricultural use has affected ground-water levels at U.S. Air Force Plant 42, and vicinity. A study to document changes in groundwater gradients and to present historical water-level data was completed by the U.S. Geological Survey in cooperation with the U.S. Air Force. This report presents historical water-level data, hydrographs, and generalized seasonal water-level and water-level contours for September?October 2000 and March?April 2001. The collection and interpretation of ground-water data helps local water districts, military bases, and private citizens gain a better understanding of the ground-water flow systems, and consequently water availability. During September?October 2000 and March?April 2001 the U.S. Geological Survey and other agencies made a total of 102 water-level measurements, 46 during September?October 2000 and 56 during March?April 2001. These data document recent conditions and, when compared with historical data, document changes in ground-water levels. Two water-level contour maps were drawn: the first depicts water-level conditions for September?October 2000 map and the second depicts water-level conditions for March?April 2001 map. In general, the water-level contour maps show water-level depressions formed as result of ground-water withdrawal. One hundred sixteen long-term hydrographs, using water-level data from 1915 through 2000, were constructed to show water-level trends in the area. The hydrographs indicate that water-level decline occurred throughout the study area, with the greatest declines south of U.S. Air Force Plant 42.

Scientific Investigations Report↗
USGS2005

Stratabound copper-silver deposits of the Mesoproterozoic Revett Formation, Montana and Idaho, with a section on databases and spatial-data files for the geology and mineral deposits of the Revett Formation

The western Montana copper belt in western Montana and northern Idaho contains several large stratabound copper-silver deposits in fine- to medium-grained quartzite beds of the Revett Formation of the Mesoproterozoic (1,470-1,401 Ma) Belt Supergroup. Production from the deposits at the Troy Mine and lesser production from the Snowstorm Mine has yielded 222,237 tons Cu and 1,657.4 tons Ag. Estimates of undeveloped resources, mostly from the world-class Rock Creek-Montanore deposits, as well as lesser amounts at the Troy Mine, total more than 2.9 million tons Cu and 2,600 tons Ag in 406 million tons of ore.The Rock Creek-Montanore and Troy deposits, which are currently the most significant undeveloped resources identified in the copper belt, are also among the largest stratabound copper-silver deposits in North America and contain about 15 percent of the copper in such deposits in North America. Worldwide, stratabound copper-silver deposits contain 23 percent of all copper resources and are the second-most important global source of the metal after porphyry copper deposits.The Revett Formation, which consists of subequal amounts of argillite, siltite, and quartzite, is informally divided into lower, middle, and upper members on the basis of the proportions of the dominant rock types. The unit thickness increases from north to south, from 1,700 ft near the Troy Mine, 55 mi north of Wallace, Idaho, to more than 5,300 ft at Wallace, Idaho, in the Coeur d'Alene Trough south of the Osburn Fault, a major right-lateral strike-slip fault.Mineral deposits in the Revett Formation occur mostly in the A-D beds of the lower member and in the middle quartzite of the upper member. The deposits are concentrated along a preore pyrite/hematite interface in relatively coarse grained, thick quartzite beds that acted as paleoaquifers for ore fluids. The deposits are characterized by mineral zones (alteration-mineral assemblages) that are a useful guide to the locations of mineral deposits. In particular, the gradational zone between the chalcopyrite-ankerite and pyrite-calcite zones is the site of most mineral deposits. Detailed information on the geology and mineral deposits of the Revett Formation is presented in the accompanying files that include (1) a tab-delimited text file providing details of the geologic and mineral-resource data for 57 Revett-subtype stratabound copper-silver deposits, occurrences, and prospects; (2) the stratigraphic records of 40 diamond-drill cores and 86 measured sections, totaling 150,752 ft of true thickness, which are provided in Excel spreadsheet and Adobe Portable Document Format files; and (3) spatial geologic data consisting of geologic maps of the Revett Formation, the subsurface locations of resources in Revett-subtype stratabound copper-silver deposits based on diamond-drill-core data, and the locations of diamond-drill holes and measured sections. The spatial data are contained in Arc/Info interchange files. Spatial information derived from these data includes the locations of mineral zones, a digital database showing untested exploration areas, and a digital database of permissive tracts for undiscovered mineral deposits.

Idaho, Montana↗
USGS2006

County-level estimates of nutrient inputs to the land surface of the conterminous United States, 1982-2001

Nutrient input data for fertilizer use, livestock manure, and atmospheric deposition from various sources were estimated and allocated to counties in the conterminous United States for the years 1982 through 2001. These nationally consistent nutrient input data are needed by the National Water-Quality Assessment Program for investigations of stream- and ground-water quality. For nitrogen, the largest source was farm fertilizer; for phosphorus, the largest sources were farm fertilizer and livestock manure. Nutrient inputs from fertilizer use in nonfarm areas, while locally important, were an order of magnitude smaller than inputs from other sources. Nutrient inputs from all sources increased between 1987 and 1997, but the relative proportions of nutrients from each source were constant. Farm-fertilizer inputs were highest in the upper Midwest, along eastern coastal areas, and in irrigated areas of the West. Nonfarm-fertilizer use was similar in major metropolitan areas throughout the Nation, but was more extensive in the more populated Eastern and Central States and in California. Areas of greater manure inputs were located throughout the South-central and Southeastern States and in scattered areas of the West. Nitrogen deposition from the atmosphere generally increased from west to east and is related to the location of major sources and the effects of precipitation and prevailing winds. These nutrient-loading data at the county level are expected to be the fundamental basis for national and regional assessments of water quality for the National Water-Quality Assessment Program and other large-scale programs.

conterminous United States↗
USGS2012

Evaluation of the relation between evapotranspiration and normalized difference vegetation index for downscaling the simplified surface energy balance model

The Simplified Surface Energy Balance (SSEB) model uses satellite imagery to estimate actual evapotranspiration (ET a ) at 1-kilometer resolution. SSEB ET a is useful for estimating irrigation water use; however, resolution limitations restrict its use to regional scale applications. The U.S. Geological Survey investigated the downscaling potential of SSEB ET a from 1 kilometer to 250 meters by correlating ET a with the Normalized Difference Vegetation Index (NDVI) from the Moderate Resolution Imaging Spectroradiometer instrument (MODIS). Correlations were studied in three arid to semiarid irrigated landscapes of the Western United States (Escalante Valley near Enterprise, Utah; Palo Verde Valley near Blythe, California; and part of the Columbia Plateau near Quincy, Washington) during several periods from 2002 to 2008. Irrigation season ET a -NDVI correlations were lower than expected, ranging from R 2 of 0.20 to 0.61 because of an eastward 2–3 kilometer shift in ET a data. The shift is due to a similar shift identified in the land-surface temperature (LST) data from the MODIS Terra satellite, which is used in the SSEB model. Further study is needed to delineate the Terra LST shift, its effect on SSEB ET a , and the relation between ET a and NDVI.

Scientific Investigations Report↗
USGS2020

Hydrogeologic characterization of the Hualapai Plateau on the western Hualapai Indian Reservation, northwestern Arizona

This study was developed to assess if groundwater from the western Hualapai Plateau could be used to supply developments in the Grand Canyon West area of the Hualapai Indian Reservation and to collect hydrogeologic data for future use in a numerical groundwater model for the reservation. Ground-based geophysical surveys; existing well, spring, and other hydrogeologic information from previous studies; and new well and spring data collected for this study were used to provide a better understanding of the hydrogeology of the western Hualapai Plateau. Surface geophysical data provided information on the depth and geologic structure of lower Paleozoic rock units and Proterozoic crystalline and metamorphic rocks that underlie the western Hualapai Plateau. The surface geophysical data and discharge information from springs were used to select a site to drill and develop the U.S. Geological Survey Hualapai Test Well. The Hualapai Test Well was drilled to understand the geophysical properties of geologic formations at depth. These data were used to verify the results of surface geophysical data and to evaluate if sufficient water was present in the Hualapai Test Well for potential groundwater development. The Hualapai Test Well was drilled to a depth of 2,468 feet and bottomed in Proterozoic granite. Water was expected in the lower part of the Muav Limestone, but water was not observed until the Tapeats Sandstone at a depth of 2,400 feet. The Tapeats Sandstone was determined to be confined with a hydrostatic head of over 900 feet. A 48-hour pumping test was conducted to determine aquifer properties. Low specific capacity indicated that although groundwater is present in the Tapeats Sandstone, well yields are likely to be small. A water-quality sample indicated the sample had a calcium, magnesium-bicarbonate water type with a total dissolved-solids concentration of 371 milligrams per liter. Alpha radioactivity of the sample, 18.3 picocuries per liter, exceeded the U.S. Environmental Protection Agency maximum contaminant level of 15 picocuries per liter for drinking water. Concentrations of iron and manganese in the water sample also exceeded the U.S. Environmental Protection Agency secondary maximum contaminant levels for drinking water. An inventory of wells and springs provided insight into the occurrence of groundwater on the western Hualapai Plateau. Data from 56 springs on and adjacent to the western Hualapai Plateau were compiled for this study, and new data were collected at 31 springs. Discharge from springs visited for this study ranged from dry to about 345 gallons per minute. The temporal data from springs, where repeat measurements were available, indicated that spring flow is highly variable and likely related to seasonal and annual precipitation. Water levels from 36 wells on and adjacent to the western Hualapai Plateau were compiled for this study, and new water levels were collected at 5 wells. The spring and well data in conjunction with the Hualapai Test Well results indicated that on the western Hualapai Plateau, bedrock aquifers have limited discrete flow paths that make extensive groundwater development unlikely.

Arizona↗
USGS2020

Quality of pesticide data for groundwater analyzed for the National Water-Quality Assessment Project, 2013–18

The National Water-Quality Assessment (NAWQA) Project of the U.S. Geological Survey (USGS) submitted nearly 1,900 samples collected from groundwater sites across the United States in 2013–18 for analysis of 225 pesticide compounds (pesticides and pesticide degradates, hereafter referred to as “pesticides”) by USGS National Water Quality Laboratory schedule 2437 (S2437). For the associated NAWQA study of pesticide occurrence and concentration in groundwater, and for other studies using pesticide results determined by S2437, it is necessary to assess the ability of reported results to meet data-quality requirements that will allow study objectives to be achieved. This assessment of the quality of S2437 results reported in 2013–18 examined data from field and laboratory quality-control samples, along with third-party performance assessment samples, to estimate bias and variability and to identify their potential sources, with an emphasis on implications for the interpretation of pesticide data for groundwater. Results indicate that measurements produced by the S2437 method for most pesticides have bias and variability that would be considered acceptable for many interpretative studies, which could therefore use the results without qualification or censoring. However, the reported data for a subset of pesticides have the potential for unacceptable contamination bias, high or low recovery bias, or high variability as a consequence of method performance and (or) nonlaboratory factors that could preclude their use for certain common objectives or could necessitate adjustment or qualification to meet those objectives. Based on data for laboratory blanks, censoring of some detections for a subset of pesticides reported by the laboratory in environmental samples might be necessary or desirable to avoid an unacceptably high likelihood of a false-positive result caused by laboratory contamination. The 90-percent upper confidence limit for the 95th percentile of laboratory blank concentration equals or exceeds the minimum reported groundwater concentration in at least 1 water year for 28 pesticides. During at least 1 water year, this upper confidence limit exceeds the maximum laboratory detection limit for 17 pesticides and exceeds the maximum laboratory reporting limit for 3 pesticides (ametryn, atrazine, and diazinon). The level of contamination indicated by this upper confidence limit should not substantially affect the suitability of reported environmental concentrations for any compound for comparison with corresponding human-health benchmarks. Despite being subjected to the same laboratory processes as laboratory blanks, field blanks indicated little evidence of contamination bias. This observation could largely be the consequence of data-reporting practices, which utilize detections in laboratory blanks to censor results in associated field samples (including blanks and environmental samples) when relative concentrations indicate that a result could have a substantial contribution from laboratory contamination. Laboratory censoring appears likely to reduce the risk of false-positive results in environmental samples below the level that laboratory blank results alone would imply. Whereas data available for third-party blind blank samples analyzed in 2018 indicate that only propoxur had any false-positive results, data for pesticides that were not spiked into blind spike samples analyzed in 2013–18 indicate that the false-positive rates for 31 pesticides exceeded 1 percent when considering only detections reported at concentrations greater than the maximum detection limit. Although about half of these pesticides lack substantial supporting evidence of contamination bias based on laboratory blank or field blank detections, indicating that spiking issues or degradation of parent compounds within the spiked samples might be a contributing factor to some false-positive results, these results indicate the need to closely examine detections reported for some pesticides in environmental samples analyzed during a similar period for possible contributions from contamination bias. Data for blind spike samples that were spiked at concentrations above the maximum reporting limit indicate that false-negative rates for eight pesticides exceed 10 percent; substantial low bias could affect results reported for these pesticides in environmental samples analyzed during a similar period. Data for laboratory reagent spikes, which measure recovery of pesticides in blank water, show little evidence for unacceptable recovery bias for S2437 pesticides. However, field matrix spikes, which measure recovery of pesticides in environmental matrices, indicate that degradation and (or) matrix effects could result in moderate to substantial low bias for groundwater results for several pesticides. Low bias could cause some reported concentrations to be categorized as being below a benchmark when the actual concentration in groundwater is greater than the benchmark. Occurrence and concentrations in groundwater could be substantially underrepresented for six pesticides with benchmarks (1H-1,2,4-triazole, asulam, bifenthrin, cis-permethrin, fenbutatin oxide, and naled) that have median recoveries between zero and 50 percent in field matrix spikes. Two compounds (didealkylatrazine and 2-hydroxy-6-ethylamino-4-amino-s-triazine) have median recoveries near or greater than 150 percent in field matrix spikes, indicating a substantial high bias. Plots of data for all spike types show clear changes in the typical recovery with time for some pesticides, which would require further examination for evaluation of temporal trends in environmental concentrations. Data for laboratory reagent spikes indicate that nearly all S2437 pesticides have acceptable variability resulting from random measurement error. Only two compounds (fenbutatin oxide and naled) have F-pseudosigma values greater than 30 percent for recovery, which implies the potential for relatively high variability in reported concentrations and could affect comparison of concentrations to benchmarks and determination of whether concentrations for samples collected at separate locations or times are truly different with a specified level of confidence. Data for third-party blind spike samples show relatively high variability for a greater number of pesticides, although these results likely reflect the influence of degradation and (or) differences in the magnitude and variability of concentrations used for blind spikes relative to laboratory reagent spikes. Detailed analysis of variability using field replicate data is possible for only 12 pesticides on S2437; low variability in analyte detection and concentration is indicated for most of these pesticides in groundwater.

Scientific Investigations Report↗
USGS2021

Historical hydrologic and geomorphic conditions on the Black River and selected tributaries, Arkansas and Missouri

The Black River flows through southeast Missouri and northeast Arkansas to its confluence with the White River in Arkansas. The U.S. Army Corps of Engineers operates Clearwater Dam on the Black River and a series of dams in the White River Basin primarily for flood control. In this study, the hydrology and geomorphology of the Black River are examined through an analysis of annual mean and peak discharges at streamgages, a specific stage analysis of stage and discharge at streamgages, and an examination of bathymetric data and aerial imagery. Five streamgages on the Black River were analyzed, in addition to four streamgages on Black River tributaries and one streamgage on the White River, located just downstream from the Black River confluence. The analyses indicated that regulation of discharges at the flood-control dams caused a decrease in the magnitude and variability of the peak discharges at several of the analyzed gages on the Black and White Rivers. Conversely, peak discharges on the Black River have been increasing since water year 2000, though this is not matched by an increase in peak discharges on the White River for the same time period. The specific stage analyses and the available morphologic data generally did not indicate pronounced changes in stage-discharge relations at streamgages on the Black River, with the exception of the gages nearest to Clearwater Dam.

Arkansas, Missouri↗
USGS2023

Status and trends of total nitrogen and total phosphorus concentrations, loads, and yields in streams of Mississippi, water years 2008–18

To assess the status and trends of conditions of surface waters throughout Mississippi, the U.S. Geological Survey, in cooperation with the Mississippi Department of Environmental Quality (MDEQ), summarized concentrations and estimated loads, yields, trends, and spatial and temporal patterns of total nitrogen (TN) and total phosphorus (TP) at 20 stream sites in MDEQ’s ambient water-quality monitoring network and 2 stream sites in the U.S. Geological Survey’s National Water-Quality Assessment Project’s monitoring network. Comparison of streamflow at the time of water-quality sample collection to flow-duration curves for each site showed that samples were relatively evenly spread over a wide range of flows, indicating that load estimations were representative of a wide range of flows. Relation of streamflow to concentrations of TN and TP varied among sites and land use. Sites with high agriculture land use in the drainage basin tended to have a positive correlation between streamflow and concentration, suggesting influence of event-driven nonpoint-source runoff. Sites near urban (developed) areas tended to have a negative correlation between streamflow and concentration, suggesting chronic point-source influences during low-flow conditions. Sites with high forest land use and lower agriculture and urban (developed) land use showed little to no association between streamflow and concentration. Seasonal distributions of concentrations of TN and TP also corresponded closely with variations in land use. Sites near urban (developed) land had the highest concentrations in late summer and fall, sites with a high percentage of agricultural land had the highest concentrations in the spring, and sites that were primarily forested or with little developed land did not exhibit substantial changes in concentration across seasons. Eight sites had statistical likelihoods for upward trends of TN loads, and seven sites had statistical likelihoods for downward trends. Trends in TN loads at six sites were considered “about as likely as not,” meaning that a site has an equal chance of having an upward or downward trend. Trend results of mean annual flow-normalized loads of TP for the period of analysis (2008–18) showed that 16 sites had upward trends, 3 sites had downward trends, and 2 sites were considered “about as likely as not.” Results from our study were compared to results from existing regional models to assess accuracy of predictions at a local scale. Comparisons of yields predicted from 2012 regional-scale SPAtially Referenced Regressions on Watershed attributes (SPARROW) to results from this study showed the 2012 SPARROW-predicted estimates varied in consistency with results from this study. The 2012 SPARROW-prediction model underestimated TN yields, more often and by a slightly larger degree, more than it overestimated TN yields. The 2012 SPARROW-predicted model tended to underestimate yields at study sites with higher yields. All four sites in the predominantly agricultural area of northwest Mississippi, locally known as the Mississippi Delta, were underestimated by 2012 SPARROW. For TP, yield comparisons at sites with lower yields were consistent, yields at sites with midrange yields tended to be overestimated by SPARROW, and yields at sites with high yields tended to be underestimated by SPARROW. TP yields at four sites in the Mississippi Delta were underestimated by the 2012 SPARROW-predicted model. Results of select sites from our study were also compared to other published load estimates from an earlier time period to evaluate possible trends. Comparison of TN yields at four sites and TP yields at three sites from the study-derived estimates to estimates made from data spanning 1993–2004 showed decreasing TN yields at all four sites and decreasing TP yields at two of three sites, with increasing yields of TP at the Yazoo River lower site. Also, a third comparison of the TN and TP yields of the Yazoo River lower site of this study to estimates made from data spanning 1996–97 showed decreasing TN yields but similar TP yields. This suggests that TN yields may have decreased over the last 20–30 years, but TP yields remain constant or are increasing.

Mississippi↗
USGS2024

Three-dimensional geologic framework model of the Rio San Jose groundwater basin and adjacent areas, New Mexico

As part of a U.S. Geological Survey study in cooperation with the Bureau of Reclamation and the Pueblo of Acoma, New Mexico, and the Pueblo of Laguna, New Mexico, a digital three-dimensional geologic framework model was constructed for the Rio San Jose and its surface-water drainage basin in west-central New Mexico. This three-dimensional model defines the altitude, thickness, and extent of 18 geologic units for use in a regional numerical hydrologic model. The model included an undifferentiated Proterozoic basement layer, 13 consolidated Paleozoic and Mesozoic rock units, and 4 Cenozoic units. Model input data were compiled from published cross sections, well data, structure contour maps, selected geophysical data, and data derived from geologic maps and structural features in the study area. These data were used to construct faulted surfaces that represent the upper and lower subsurface geologic unit boundaries. The digital three-dimensional geologic framework model combines faults, the altitude of the tops of each geologic unit, and boundary lines depicting the subsurface extent of each geologic unit. The digital three-dimensional geologic model described in this report and the corresponding data release represents the generalized geometry of the subsurface geologic units; it reproduces with reasonable accuracy the input geologic data and is consistent with previously published subsurface conceptualizations of the region. The geologic framework model is at a scale and resolution appropriate for use as the foundation for a numerical hydrologic model of the study area.

New Mexico↗
USGS2024

Case definitions for wildlife diseases

Welcome to the first manual of “Case Definitions for Wildlife Diseases,” a “living” electronic publication. The plan is to add and update this manual’s case definitions periodically as warranted; thus, this manual will never be completed, and readers should download the latest versions of specific chapters (that is, definitions) when available. Constructive suggestions from readers are welcome and will help guide adjustments as this project progresses. The purpose of this manual is to provide case definitions for selected diseases of importance to wildlife in Canada and the United States. Case definitions provide standard sets of criteria for classifying the degree of certainty of a particular diagnosis and help improve surveillance data quality and comparability. Better data and standardization allow for improved data sharing, which increases geographic and species surveillance coverage and permits more robust analyses. The definitions included in this manual have been developed by veterinary pathologists, epidemiologists, and wildlife biologists primarily from the U.S. Geological Survey National Wildlife Health Center (NWHC) and Canadian Wildlife Health Cooperative (CWHC). Pathologists from each organization reviewed and finalized the definitions. Each case definition has been peer reviewed by two scientific experts before publication. This manual begins with the case definition template. This generic template includes four sections: “Individual, Place, and Time Criteria for Diagnosis and Testing,” “Field Criteria for Diagnosis,” “Laboratory Criteria for Diagnosis,” and “Epidemiological Linkage Criteria for Diagnosis” and can be used to guide development of new case definitions. Information in each section is then combined to provide an overall case classification. Disease diagnoses are classified as “Confirmed,” “Presumptive,” or “Suspected;” and evidence of a pathogen or toxin is classified as “Exposed” or “Present/Detected.” Each subsequent chapter is then a case definition for a specific disease of wildlife, and infectious and non-infectious diseases are included.

Techniques and Methods↗
USGS1997

A science-based, watershed strategy to support effective remediation of abandoned mine lands

A U.S. Geological Survey Abandoned Mine Lands Initiative will develop a strategy for gathering and communicating the scientific information needed to formulate effective and cost-efficient remediation of abandoned mine lands. A watershed approach will identify, characterize, and remediate contaminated sites that have the most profound effect on water and ecosystem quality within a watershed. The Initiative will be conducted during 1997 through 2001 in two pilot watersheds, the Upper Animas River watershed in Colorado and the Boulder River watershed in Montana. Initiative efforts are being coordinated with the U.S. Forest Service, Bureau of Land Management, National Park Service, and other stakeholders which are using the resulting scientific information to design and implement remediation activities. The Initiative has the following eight objective-oriented components: estimate background (pre-mining) conditions; define baseline (current) conditions; identify target sites (major contaminant sources); characterize target sites and processes affecting contaminant dispersal; characterize ecosystem health and controlling processes at target sites; develop remediation goals and monitoring network; provide an integrated, quality-assured and accessible data network; and document lessons learned for future applications of the watershed approach.

Colorado;Montana↗
USGS1999

U.S. Geological Survey middle Rio Grande basin study; proceedings of the third annual workshop, Albuquerque, New Mexico, February 24-25, 1999

Approximately 40 percent (about 600,000 people) of the total population of New Mexico lives within the Middle Rio Grande Basin, which includes the City of Albuquerque. Ongoing analyses of the central portion of the Middle Rio Grande Basin by the U.S. Geological Survey (USGS) in cooperation with the City of Albuquerque and other agencies have shown that ground water in the basin is not as readily accessible as earlier studies indicated. A more complete characterization of the ground-water resources of the entire Middle Rio Grande Basin is hampered by a scarcity of data in the northern and southern areas of the basin. The USGS Middle Rio Grande Basin study is a 5-year effort by the USGS and other agencies to improve the understanding of the hydrology, geology, and land-surface characteristics of the Middle Rio Grande Basin. The primary objective of this study is to improve the understanding of the water resources of the basin. Of particular interest is to determine the extent of hydrologic connection between the Rio Grande and the Santa Fe Group aquifer. Additionally, ground-water quality affects the availability of water supplies in the basin. Improving the existing USGS-constructed ground-water flow model of the Middle Rio Grande Basin will integrate all the various tasks that improve our knowledge of the various components of the Middle Rio Grande water budget. Part of this improvement will be accompanied by extended knowledge of the aquifer system beyond the Albuquerque area into the northern and southern reaches of the basin. Other improvements will be based on understanding gained through process-oriented research and improved geologic characterization of the deposits. The USGS and cooperating agencies will study the hydrology, geology, and land-surface characteristics of the basin to provide the scientific information needed for water-resources management and for managers to plan for water supplies needed for a growing population. To facilitate exchange of information among the scientists working on the Middle Rio Grande Basin study, yearly technical meetings have been held for each of the first 3 years of the anticipated 5-year study. These meetings provide an opportunity to present research results and plan new field efforts. This report documents the results of research presented at the third annual technical workshop held in Albuquerque, New Mexico, February 24-25, 1999. The report is organized into this introduction and five chapters that focus on Middle Rio Grande Basin study investigations in progress in the Middle Rio Grande Basin. The first chapter describes geographic data and analysis efforts in the basin. The second chapter details work being done on the hydrogeologic and geologic framework of the basin. The third chapter describes studies on ground-water recharge in the basin. The fourth chapter provides details on the research on the ground-water flow system in the basin, including modeling efforts. The fifth chapter is devoted to an overview of New Mexico District Cooperative Program studies in the basin. The information in this report presents preliminary results of an evolving study. As the study progresses and individual projects publish their results in more detail, the USGS hopes to expand the scientific basis needed for management decisions regarding the Middle Rio Grande Basin.

Open-File Report↗
USGS1997

Perceptions of species abundance, distribution, and diversity: Lessons from four decades of sampling on a government-managed reserve

We examined data relative to species abundance, distribution, and diversity patterns of reptiles and amphibians to determine how perceptions change over time and with level of sampling effort. Location data were compiled on more than one million individual captures or observations of 98 species during a 44-year study period on the US Department of Energy’s (DOE) Savannah River Site National Environmental Research Park (SRS-NERP) in South Carolina. We suggest that perceptions of herpetofaunal species diversity are strongly dependent on level of effort and that land management decisions based on short-term data bases for some faunal groups could result in serious errors in environmental management. We provide evidence that acquiring information on biodiversity distribution patterns is compatible with multiyear spatially extensive research programs and also provide a perspective of what might be achieved if long-term, coordinated research efforts were instituted nationwide. To conduct biotic surveys on government-managed lands, we recommend revisions in the methods used by government agencies to acquire and report biodiversity data. We suggest that government and industry employees engaged in biodiversity survey efforts develop proficiency in field identification for one or more major taxonomic groups and be encouraged to measure the status of populations quantitatively with consistent and reliable methodologies. We also suggest that widespread academic cooperation in the dissemination of information on regional patterns of biodiversity could result by establishment of a peer-reviewed, scientifically rigorous journal concerned with status and trends of the biota of the United States.

Environmental Management↗
USGS2021

Improving the usability of Galileo and Voyager images of Jupiter’s moon, Europa

NASA's Voyager 1, Voyager 2, and Galileo spacecraft acquired hundreds of images of Jupiter's moon Europa. These images provide the only moderate- to high-resolution views of the moon's surface and are therefore a critical resource for scientific analysis and future mission planning. Unfortunately, uncertain knowledge of the spacecraft's position and pointing during image acquisition resulted in significant errors in the location of the images on the surface. The result is that adjacent images are poorly aligned, with some images displaced by more than 100 km from their correct location. These errors severely degrade the usability of the Voyager and Galileo imaging data sets. To improve the usability of these data sets, we used the U.S. Geological Survey Integrated Software for Imagers and Spectrometers to build a nearly global image tie-point network with more than 50,000 tie points and 135,000 image measurements on 481 Galileo and 221 Voyager images. A global least-squares bundle adjustment of our final Europa tie-point network calculated latitude, longitude, and radius values for each point by minimizing residuals globally, and resulted in root mean square (RMS) uncertainties of 246.6 m, 307.0 m, and 70.5 m in latitude, longitude, and radius, respectively. The total RMS uncertainty was 0.32 pixels. This work enables direct use of nearly the entire Galileo and Voyager image data sets for Europa. We are providing the community with updated NASA Navigation and Ancillary Information Facility Spacecraft, Planet, Instrument, C-matrix (pointing), and Events kernels, mosaics of Galileo images acquired during each observation sequence, and individual processed and projected level 2 images.

Earth and Space Science↗
USGS2019

Modeling spatially and temporally complex range dynamics when detection is imperfect

Species distributions are determined by the interaction of multiple biotic and abiotic factors, which produces complex spatial and temporal patterns of occurrence. As habitats and climate change due to anthropogenic activities, there is a need to develop species distribution models that can quantify these complex range dynamics. In this paper, we develop a dynamic occupancy model that uses a spatial generalized additive model to estimate non-linear spatial variation in occupancy not accounted for by environmental covariates. The model is flexible and can accommodate data from a range of sampling designs that provide information about both occupancy and detection probability. Output from the model can be used to create distribution maps and to estimate indices of temporal range dynamics. We demonstrate the utility of this approach by modeling long-term range dynamics of 10 eastern North American birds using data from the North American Breeding Bird Survey. We anticipate this framework will be particularly useful for modeling species’ distributions over large spatial scales and for quantifying range dynamics over long temporal scales.

Scientific Reports↗
USGS2020

Mechanics of near-field deformation during co- and post-seismic shallow fault slip

Poor knowledge of how faults slip and distribute deformation in the shallow crust hinders efforts to mitigate hazards where faults increasingly intersect with the expanding global population at Earth’s surface. Here we analyze two study sites along the 2014 M 6.0 South Napa, California, earthquake rupture, each dominated by either co- or post-seismic shallow fault slip. We combine mobile laser scanning (MLS), active-source seismic tomography, and finite element modeling to investigate how deformation rate and mechanical properties of the shallow crust affect fault behavior. Despite four orders-of-magnitude difference in the rupture velocities, MLS-derived shear strain fields are remarkably similar at the two sites and suggest deceleration of the co-seismic rupture near Earth’s surface. Constrained by the MLS and seismic data, finite element models indicate shallow faulting is more sensitive to lithologic layering and plastic yielding than to the presence of fault compliant zones (i.e., regions surrounding faults with reduced stiffness). Although both elastic and elastoplastic models can reproduce the observed surface displacement fields within the uncertainty of MLS data, elastoplastic models likely provide the most reliable representations of subsurface fault behavior, as they produce geologically reasonable stress states and are consistent with field, geodetic, and seismological observations.

California↗
USGS2016

Contaminants in urban waters—Science capabilities of the U.S. Geological Survey

Streams and estuaries with urban watersheds commonly exhibit increased streamflow and decreased base flow; diminished stream-channel stability; excessive amounts of contaminants such as pesticides, metals, industrial and municipal waste, and combustion products; and alterations to biotic community structure. Collectively, these detrimental effects have been termed the “urban-stream syndrome.” Water-resource managers seek to lessen the effects on receiving water bodies of new urban development and remediate the effects in areas of existing urbanization. Similarly, the scientific community has produced extensive research on these topics, with researchers from the U.S. Geological Survey (USGS) leading many studies of urban streams and the processes responsible for the urban-stream syndrome. Increasingly, USGS studies are evaluating the effects of management and restoration activities to better understand how urban waters respond to the implementation of management practices. The USGS has expertise in collecting and interpreting data for many physical, chemical, and ecological processes in urban waters and, thus, provides holistic assessments to inform managers of urban water resources.

Fact Sheet↗