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At least 1,549 records · Page 86Linked to original sources

Assessment of water-quality data from Long Lake National Wildlife Refuge, North Dakota--2008 through 2012

ong Lake National Wildlife Refuge, located in south-central North Dakota, is an important habitat for numerous migratory birds and waterfowl, including several threatened or endangered species. The refuge is distinguished by Long Lake, which is approximately 65 square kilometers and consists of four primary water management units. Water levels in the Long Lake units are maintained by low-level dikes and water-control structures, which after construction during the 1930s increased the water-storage capacity of Long Lake and reduced the frequency and volume of flushing flows downstream. The altered water regime, along with the negative precipitation:evaporation ratio of the region, may be contributing to the accumulation of water-borne chemical constituents such as salts, trace metals, and other constituents, which at certain threshold concentrations may impair aquatic plant, invertebrate, and bird communities of the refuge. The refuge’s comprehensive conservation planning process identified the need for water-quality monitoring to assess current (2013) conditions, establish comparative baselines, evaluate changes over time (trends), and support adaptive management of the wetland units. In 2008, the U.S. Geological Survey, U.S. Fish and Wildlife Service, and North Dakota Department of Health began a water-quality monitoring program at Long Lake National Wildlife Refuge to address these needs. Biweekly water-quality samples were collected for ions, trace metals, and nutrients; and in situ sensors and data loggers were installed for the continuous measurement of specific conductance and water depth. Long Lake was characterized primarily by sodium, bicarbonate, and sulfate ions. Overall results for total alkalinity and hardness were 580 and 329 milligrams per liter, respectively; thus, Long Lake is considered alkaline and classified as very hard. The mean pH and sodium adsorption ratio for Long Lake were 8.8 and 10, respectively. Total dissolved solids concentrations averaged approximately 1,750 milligrams per liter, and ranged from 117 to 39,700 milligrams per liter. Twelve of the 14 trace metals detected in the water samples had established North Dakota water-quality standards for aquatic life, and only aluminum and copper consistently exceeded these criteria. Aluminum is considered harmful to aquatic biota in acidic (pH less than 5.5) systems and most of the copper standard exceedances were collected from highly concentrated waters because of evaporation and seasonally low water levels. Concentrations for various forms of nitrogen and phosphorus generally were similar to reported regional values. Specific conductance of Long Lake varied seasonally and annually both within and among management units, with values ranging from less than 500 to nearly 40,000 microsiemens per centimeter at 25 degrees Celsius. Long Lake was characterized by consistent seasonal patterns of increasing specific conductance from spring (March and April) to fall (September and October), with levels stabilizing through the end of the sampling season (November). These seasonal patterns in specific conductance were associated with decreasing water levels throughout the summer due primarily to evaporation and continuous water releases through the Unit 1 outlet structure, which resulted in the concentration of salts. Specific conductance of each unit, along with water levels, also varied among years. Overall, specific conductance levels were greatest during the drier year of 2008 when water levels were low. Specific conductance levels were lowest during the spring of 2009 following above-average volumes of fresh water from snowmelt runoff. Comparisons of specific conductance among sample sites that were spatially distributed within each management unit suggested that spatial variability within units was low except for areas associated with local inflows. Data collected during this study revealed consistent seasonal patterns and low within-unit spatial variability of specific conductance. Based on these data results, future sample collection efforts may be reduced, as well as the number of sample locations, to limit sampling costs. Water-quality samples collected monthly or seasonally during the growing season (spring, summer, and fall) from a single representative location within each water-management unit should provide sufficient data to assess seasonal changes in water-quality over time and provide information for Long Lake management decisions.

North Dakota↗

Monitoring recharge in areas of seasonally frozen ground in the Columbia Plateau and Snake River Plain, Idaho, Oregon, and Washington

Seasonally frozen ground occurs over approximately one‑third of the contiguous United States, causing increased winter runoff. Frozen ground generally rejects potential groundwater recharge. Nearly all recharge from precipitation in semi-arid regions such as the Columbia Plateau and the Snake River Plain in Idaho, Oregon, and Washington, occurs between October and March, when precipitation is most abundant and seasonally frozen ground is commonplace. The temporal and spatial distribution of frozen ground is expected to change as the climate warms. It is difficult to predict the distribution of frozen ground, however, because of the complex ways ground freezes and the way that snow cover thermally insulates soil, by keeping it frozen longer than it would be if it was not snow covered or, more commonly, keeping the soil thawed during freezing weather. A combination of satellite remote sensing and ground truth measurements was used with some success to investigate seasonally frozen ground at local to regional scales. The frozen-ground/snow-cover algorithm from the National Snow and Ice Data Center, combined with the 21-year record of passive microwave observations from the Special Sensor Microwave Imager onboard a Defense Meteorological Satellite Program satellite, provided a unique time series of frozen ground. Periodically repeating this methodology and analyzing for trends can be a means to monitor possible regional changes to frozen ground that could occur with a warming climate. The Precipitation-Runoff Modeling System watershed model constructed for the upper Crab Creek Basin in the Columbia Plateau and Reynolds Creek basin on the eastern side of the Snake River Plain simulated recharge and frozen ground for several future climate scenarios. Frozen ground was simulated with the Continuous Frozen Ground Index, which is influenced by air temperature and snow cover. Model simulation results showed a decreased occurrence of frozen ground that coincided with increased temperatures in the future climate scenarios. Snow cover decreased in the future climate scenarios coincident with the temperature increases. Although annual precipitation was greater in future climate scenarios, thereby increasing the amount of water available for recharge over current (baseline) simulations, actual evapotranspiration also increased and reduced the amount of water available for recharge over baseline simulations. The upper Crab Creek model shows no significant trend in the rates of recharge in future scenarios. In these scenarios, annual precipitation is greater than the baseline averages, offsetting the effects of greater evapotranspiration in future scenarios. In the Reynolds Creek Basin simulations, precipitation was held constant in future scenarios and recharge was reduced by 1.0 percent for simulations representing average conditions in 2040 and reduced by 4.3 percent for simulations representing average conditions in 2080. The focus of the results of future scenarios for the Reynolds Creek Basin was the spatial components of selected hydrologic variables for this 92 square mile mountainous basin with 3,600 feet of relief. Simulation results from the watershed model using the Continuous Frozen Ground Index provided a relative measure of change in frozen ground, but could not identify the within-soil processes that allow or reject available water to recharge aquifers. The model provided a means to estimate what might occur in the future under prescribed climate scenarios, but more detailed energy-balance models of frozen-ground hydrology are needed to accurately simulate recharge under seasonally frozen ground and provide a better understanding of how changes in climate may alter infiltration.

Idaho;Oregon;Washington↗

High-resolution topography and geomorphology of select archeological sites in Glen Canyon National Recreation Area, Arizona

Along the Colorado River corridor between Glen Canyon Dam and Lees Ferry, Arizona, located some 25 km downstream from the dam, archaeological sites dating from 8,000 years before present through the modern era are located within and on top of fluvial and alluvial terraces of the prehistorically undammed river. These terraces are known to have undergone significant erosion and retreat since emplacement of Glen Canyon Dam in 1963. Land managers and policy makers associated with managing the flow of the Colorado River are interested in understanding how the operations of Glen Canyon Dam have affected the archeological sites associated with these terraces and how dam-controlled flows currently interact with other landscape-shaping processes. In 2012, the U.S. Geological Survey initiated a research project in Glen Canyon to study the types and causes of erosion of the terraces. This report provides the first step towards this understanding by presenting comparative analyses on several types of high-resolution topographic data (airborne lidar, terrestrial lidar, and airborne photogrammetry) that can be used in the future to document and analyze changes to terrace-based archaeological sites. Herein, we present topographic and geomorphologic data of four archaeological sites within a 14 km segment of Glen Canyon using each of the three data sources. In addition to comparing each method’s suitability for adequately representing the topography of the sites, we also analyze the data within each site’s context and describe the geomorphological processes responsible for erosion. Our results show that each method has its own strengths and weaknesses, and that terrestrial and airborne lidar are essentially interchangeable for many important topographic characterization and monitoring purposes. However, whereas terrestrial lidar provides enhanced capacity for feature recognition and gully morphology delineation, airborne methods (whether by way of laser or optical sensors) are better suited for reach- and regional-scale mapping. Our site-specific geomorphic analyses of the four archeological sites indicate that their current topographical conditions are a result of different and sometimes competing erosional agents, including bedrock- and terrace-based overland flow, fluvial-induced terrace bank collapse, and alluvial-fan-generated debris flows. Although the influences of anthropogenic-induced erosion from dam operations are not specifically analyzed in this report, we do identify geomorphic settings where dam operations are either more or less likely to affect archeological site stability. This information can be used to assist with future monitoring efforts of these sites and identification of similar conditions for other archeological sites along the Colorado River corridor in Glen Canyon.

Arizona↗

Hydrogeologic framework and groundwater/surface-water interactions of the South Fork Nooksack River Basin, northwestern Washington

A hydrogeologic framework of the South Fork (SF) Nooksack River Basin in northwestern Washington was developed and hydrologic data were collected to characterize the groundwater-flow system and its interaction with surface‑water features. In addition to domestic, agricultural, and commercial uses of groundwater within the SF Nooksack River Basin, groundwater has the potential to provide ecological benefits by maintaining late-summer streamflows and buffering stream temperatures. Cold-water refugia, created and maintained in part by groundwater, have been identified by water-resource managers as key elements to restore the health and viability of threatened salmonids in the SF Nooksack River. The SF Nooksack River drains a 183-square mile area of the North Cascades and the Puget Lowland underlain by unconsolidated glacial and alluvial sediments deposited over older sedimentary, metamorphic, and igneous bedrock. The primary aquifer that interacts with the SF Nooksack River was mapped within unconsolidated glacial outwash and alluvial sediment. The lower extent of this unit is bounded by bedrock and fine-grained, poorly sorted unconsolidated glaciomarine and glaciolacustrine sediments. In places, these deposits overlie and confine an aquifer within older glacial sediments. The extent and thickness of the hydrogeologic units were assembled from mapped geologic units and lithostratigraphic logs of field-inventoried wells. Generalized groundwater-flow directions within the surficial aquifer were interpreted from groundwater levels measured in August 2012; and groundwater seepage gains and losses to the SF Nooksack River were calculated from synoptic streamflow measurements made in the SF Nooksack River and its tributaries in September 2012. A subset of the field-inventoried wells was measured at a monthly interval to determine seasonal fluctuations in groundwater levels during water year 2013. Taken together, these data provide the foundation for a future groundwater-flow model of the SF Nooksack River Basin that may be used to investigate the potential effects of future climate change, land use, and groundwater pumping on water resources in the study area. Site-specific hydrologic data, including time series of longitudinal temperature profiles measured with a fiber-optic distributed temperature sensor and continuous monitoring of stream stage and water levels measured in wells in adjacent wetlands and aquifers, also were measured to characterize the interaction among the SF Nooksack River, surficial aquifers, and riparian wetlands.

Washington↗

Towards automating measurements and predictions of Escherichia coli concentrations in the Cuyahoga River, Cuyahoga Valley National Park, Ohio, 2012–14

Nowcasts are systems that can provide estimates of the current bacterial water-quality conditions based on predictive models using easily-measured, explanatory variables; nowcasts can provide the public with the information to make informed decisions on the risk associated with recreational activities in natural water bodies. Previous studies on the Cuyahoga River within Cuyahoga Valley National Park (CVNP) have found that predictive models can be used to provide accurate assessments of the recreational water quality. However, in order to run the previously developed nowcasts for CVNP, manual collection and processing of samples is required on a daily basis to acquire the required explanatory variable data (laboratory-measured turbidity). The U.S. Geological Survey and the National Park Service collaborated to develop a more automated approach to provide more timely results to park visitors regarding the recreational water quality of the river. In May 2012, an in-stream water-quality sensor was installed by the U.S. Geological Survey at Jaite, Ohio (a site centrally located in CVNP on the Cuyahoga River), to provide near-real-time measurements of turbidity and water temperature. To transition from methods used during previous studies at CVNP, a relation between laboratory- and in-stream measured turbidity was developed after the recreational season of 2012. During the recreational seasons of 2012 through 2014, discrete water samples were collected and processed to determine Escherichia coli ( E. coli ) concentrations at Jaite and one site upstream of Jaite (Lock 29) within CVNP. Predictive models, using in-stream turbidity measurements, were developed for the recreational seasons of 2013 and 2014 to estimate recreational water quality in regards to Ohio’s single-sample water-quality standard for primary-contact recreation. A computer program was developed to manage the nowcasts by running the predictive models and posting the results to a publicly accessible Web site daily by 9 a.m. The nowcasts were able to correctly predict E. coli concentrations above or below the water-quality standard at Jaite for 79 percent of the samples compared with the measured concentrations. In comparison, the persistence model (using the previous day’s sample concentration) correctly predicted concentrations above or below the water-quality standard in only 68 percent of the samples. To determine if the Jaite nowcast could be used for the stretch of the river between Lock 29 and Jaite, the model predictions for Jaite were compared with the measured concentrations at Lock 29. The Jaite nowcast provided correct responses for 77 percent of the Lock 29 samples, which was a greater percentage than the percentage of correct responses (58 percent) from the persistence model at Lock 29.

Ohio↗

Flood-inundation maps for Grand River, Red Cedar River, and Sycamore Creek near Lansing, Michigan

Digital flood-inundation maps for a total of 19.7 miles of the Grand River, the Red Cedar River, and Sycamore Creek were created by the U.S. Geological Survey (USGS) in cooperation with the City of Lansing, Michigan, and the U.S. Army Corps of Engineers. The flood-inundation maps, which can be accessed through the USGS Flood Inundation Mapping Science Web site at http://water.usgs.gov/osw/flood_inundation/ , show estimates of the areal extent and depth of flooding corresponding to selected water levels (stages) at three USGS streamgages: Grand River at Lansing, MI (04113000), Red Cedar River at East Lansing, MI (04112500), and Sycamore Creek at Holt Road near Holt, MI (04112850). Near-real-time stages at these streamgages can be obtained on the Internet from the USGS National Water Information System at http://waterdata.usgs.gov/ or the National Weather Service (NWS) Advanced Hydrologic Prediction Service at http:/water.weather.gov/ahps/ , which also forecasts flood hydrographs at all of these sites. Each set of flood profiles was computed by means of a one-dimensional step-backwater model. Each model was calibrated to the current stage-discharge relation at each streamgage and to water levels determined with stage sensors (pressure transducers) temporarily deployed along each stream reach. The hydraulic model was used to compute a set of water-surface profiles for flood stages from nearly Action Stage to above Major Flood stage, as reported by the National Weather Service. The computed water-surface profiles were then used in combination with a Geographic Information System digital elevation model derived from light detection and ranging (lidar) data to delineate the approximate areas flooded at each water level. These maps, used in conjunction with real-time USGS streamgage data and NWS forecasting, provide critical information to emergency management personnel and the public. This information is used to plan flood response actions, such as evacuations and road closures, as well as aid in postflood recovery efforts.

Michigan↗

Water Quality, Cyanobacteria, and Environmental Factors and Their Relations to Microcystin Concentrations for Use in Predictive Models at Ohio Lake Erie and Inland Lake Recreational Sites, 2013-14

Harmful cyanobacterial &ldquo;algal&rdquo; blooms (cyanoHABs) and associated toxins, such as microcystin, are a major water-quality issue for Lake Erie and inland lakes in Ohio. Predicting when and where a bloom may occur is important to protect the public that uses and consumes a water resource; however, predictions are complicated and likely site specific because of the many factors affecting toxin production. Monitoring for a variety of environmental and water-quality factors, for concentrations of cyanobacteria by molecular methods, and for algal pigments such as chlorophyll and phycocyanin by using optical sensors may provide data that can be used to predict the occurrence of cyanoHABs. To test these monitoring approaches, water-quality samples were collected at Ohio recreational sites during May&ndash;November in 2013 and 2014. In 2013, samples were collected monthly at eight sites at eight lakes to facilitate an initial assessment and select sites for more intensive sampling during 2014. In 2014, samples were collected approximately weekly at five sites at three lakes. Physical water-quality parameters were measured at the time of sampling. Composite samples were preserved and analyzed for dissolved and total nutrients, toxins, phytoplankton abundance and biovolume, and cyanobacterial genes by molecular methods. Molecular assays were done to enumerate (1) general cyanobacteria, (2) general Microcystis and Dolichospermum ( Anabaena ), (3) mcyE genes for Microcystis , Dolichospermum ( Anabaena ), and Planktothrix targeting deoxyribonucleic acid (DNA), and (4) mcyE transcripts for Microcystis , Dolichospermum ( Anabaena ), and Planktothrix targeting ribonucleic acid (RNA).The DNA assays for the mcyE gene provide data on cyanobacteria that have the potential to produce microcystin, whereas the RNA assays provide data on cyanobacteria that are actively transcribing the toxin gene. Environmental data were obtained from available online sources. Quality-control (QC) samples were collected and analyzed for all constituents to characterize bias and variability; however, QC data for molecular assays were examined in more detail than for the other constituents. The QC data for molecular assays suggested that sampling variability and qPCR variability were small in comparison with the combined variability associated with sample filtering, extraction and purification, and the matrix itself. A total of 46 water-quality samples were collected during 2013 at 8 beach sites&mdash;Buck Creek, Buckeye Crystal, Deer Creek, Harsha Main, Maumee Bay State Park (MBSP) Inland (negative control site), MBSP Lake Erie, Port Clinton, and Sandusky Bay. Microcystin was detected in 67&ndash;100 percent of samples at all sites except for MBSP Inland, where microcystin was detected in only 20 percent of samples. Microcystin concentrations ranged from <0.10 to 48 micrograms per liter (&micro;/L), with the widest range found at MBSP Lake Erie and the highest concentrations found at Buckeye Crystal. Saxitoxin was detected in five samples, and cylindrospermopsin was not detected in any samples. A total of 65 water-quality samples were collected during 2014 at 5 sites on 3 lakes&mdash;Buckeye Fairfield and Onion Island, Harsha Main and Campers, and MBSP Lake Erie beach. Four of the sites were bathing beaches and one site, Onion Island, was an offshore boater swim area. Concentrations of microcystin ranged from <0.10 to 240 &micro;/L and, as in 2013, the widest range was found at MBSP Lake Erie. At Buckeye Lake, microcystin concentrations were consistently high (greater than 20 &micro;/L), ranging from 23 to 81 &micro;/L. At Harsha Main and Campers, microcystin concentrations ranged from <0.10 to 15 &micro;/L. Saxitoxin was detected in four samples collected at MBSP Lake Erie. Throughout the 2014 season, the cyanobacterial community, as determined by molecular and microscopy methods, and the dominance associated with the highest microcystin concentrations were unique to individual lakes. At Buckeye Lake, Planktothrix dominated the cyanobacterial community throughout the season and Planktothrix DNA and RNA were found in 100 percent of samples; Microcystis mcyE DNA was found in low concentrations. At Harsha Lake, Dolichospermum and Microcystis were a substantial percentage of the community from late May through August, and the highest microcystin concentrations occurred in June and July. At MBSP Lake Erie, Microcystis generally dominated from mid-July through early November, and the highest microcystin concentrations occurred in August. Spearman&rsquo;s correlation coefficient (rho) was computed to determine the relations between environmental and water-quality factors and microcystin concentrations at four sites&mdash;Buckeye Fairfield, Buckeye Onion Island, Harsha Main, and MBSP Lake Erie. Factors were evaluated for use as potential independent variables in two types of predictive models&mdash;daily and long-term models. Easily or continuously measured water-quality factors and available environmental data are used for daily predictions that do not require a site visit. Data from factors used in daily predictions and results from samples collected and analyzed in a laboratory are used for long-term predictions (a few days to several weeks). A few statistically significant correlations (p &le; 0.05) between microcystin concentrations and factors for both daily and long-term predictions were found at Buckeye Onion Island, and many were found at Harsha Main and MBSP Lake Erie. There were only a few statistically significant factors for daily predictions at Buckeye Fairfield, likely because of the lack of variability in microcystin concentrations. Among factors for daily predictions, phycocyanin had the highest Spearman&rsquo;s correlation to microcystin concentrations (rho = 0.79 to 0.93) at all sites except for Buckeye Fairfield. Turbidity, pH, algae category, and Secchi depth were significantly correlated to microcystin concentrations at Harsha Main and MBSP Lake Erie. Algae categories were observational categories from 0 (none) to 4 (extreme). Several discharge variables (Maumee River at Waterville, river mouth is approximately 3.5 miles from the beach) at MBSP Lake Erie were promising environmental factors for daily predictions. In addition to discrete water-quality measurements recorded at Harsha Main at the time of sampling, many manipulated measurements (factors derived from mathematical manipulation of time-series data) available from a nearby continuous monitor were strongly correlated to microcystin concentrations; the highest correlation was found for the relation between microcystin concentrations and the antecedent 7-day average phycocyanin (rho = 0.98). For long-term predictions, the most highly correlated molecular assays were Planktothrix mcyE DNA at Buckeye Onion Island and Microcystis mcyE DNA at Harsha Main and MBSP Lake Erie. Concentrations of several nutrient constituents were significantly correlated to microcystin concentrations including total nitrogen at Buckeye Onion Island, ammonia and nitrate plus nitrite (both negatively correlated) at Harsha Main and MBSP Lake Erie, and total phosphorus at MBSP Lake Erie. The results of this study showed that water-quality and environmental variables are promising for use in site-specific daily or long-term predictive models. In order to develop more accurate models to predict toxin concentrations at freshwater lake sites, data need to be collected more frequently and for consecutive days in future studies.

Ohio↗

Spatial and temporal variation of stream chemistry associated with contrasting geology and land-use patterns in the Chesapeake Bay watershed—Summary of results from Smith Creek, Virginia; Upper Chester River, Maryland; Conewago Creek, Pennsylvania; and Difficult Run, Virginia, 2010–2013

Despite widespread and ongoing implementation of conservation practices throughout the Chesapeake Bay watershed, water quality continues to be degraded by excess sediment and nutrient inputs. While the Chesapeake Bay Program has developed and maintains a large-scale and long-term monitoring network to detect improvements in water quality throughout the watershed, fewer resources have been allocated for monitoring smaller watersheds, even though water-quality improvements that may result from the implementation of conservation practices are likely to be first detected at smaller watershed scales. In 2010, the U.S. Geological Survey partnered with the U.S. Environmental Protection Agency and the U.S. Department of Agriculture to initiate water-quality monitoring in four selected small watersheds that were targeted for increased implementation of conservation practices. Smith Creek watershed is an agricultural watershed in the Shenandoah Valley of Virginia that is dominated by cattle and poultry production, and the Upper Chester River watershed is an agricultural watershed on the Eastern Shore of Maryland that is dominated by row-cropping activities. The Conewago Creek watershed is an agricultural watershed in southeastern Pennsylvania that is characterized by mixed agricultural activities. The fourth watershed, Difficult Run, is a suburban watershed in northern Virginia that is dominated by medium density residential development. The objective of this study was to investigate spatial and temporal variations in water chemistry and suspended sediment in these four relatively small watersheds that represent a range of land-use patterns and underlying geology to (1) characterize current water-quality conditions in these watersheds, and (2) identify the dominant sources, sinks, and transport processes in each watershed. The general study design involved two components. The first included intensive routine water-quality monitoring at an existing streamgage within each study area (including continuous water-quality monitoring as well as discrete water-quality sampling) to develop a detailed understanding of the temporal and hydrologic variability in stream chemistry and sediment transport in each watershed. The second component involved extensive water-quality monitoring at various sites throughout each watershed to develop a detailed understanding of spatial patterns. Both components were used to improve understanding of sources and transport processes affecting stream chemistry, including nutrients and suspended sediments, and their implications for detecting long-term trends related to best management practices. This report summarizes the results of monitoring that was performed from April 2010 through September 2013. Individual Small Watershed Summaries Summaries for each of the four small watersheds are presented below. Each watershed has a more descriptive and detailed section in the report, but these summaries may be particularly useful for some watershed managers and stakeholders desiring slightly less technical detail. Smith Creek Smith Creek is a 105.39-mi 2 watershed within the Shenandoah Valley that drains to the North Fork Shenandoah River. The long-term Smith Creek base-flow index is 72.3 percent, indicating that on average, approximately 72 percent of Smith Creek flow was base flow, which suggests that Smith Creek streamflow is dominated by groundwater discharge rather than stormwater runoff. A series of cluster and principal components analyses demonstrated that the majority of the variability in Smith Creek water quality could be attributed to hydrologic and seasonal variability. Statistically significant positive correlations with flow were observed for turbidity, suspended sediments, total nitrogen, ammonium, orthophosphate, iron, total phosphorus, and the ratio of calcium to magnesium. Statistically significant inverse correlations with flow were observed for specific conductance, magnesium, δ 15 N of nitrate, pH, bicarbonate, calcium, and δ 18 O of nitrate. Of particular note, flow and nitrate were not statistically significantly correlated, likely because of the relatively complex concentration-discharge relationship observed in continuous and discrete datasets. Statistically significant seasonal patterns were observed for numerous water-quality constituents: water temperature, turbidity, orthophosphate, total phosphorus, suspended-sediment concentration, and silica were higher during the warm season, but pH, dissolved oxygen, and sulfate were higher during the cool season. Surrogate regression models were developed to compute sediment and nutrient loads in Smith Creek using the continuous water-quality monitors. The mean Smith Creek in-stream sediment load was approximately 6,900 tons per year, with nearly 90 percent of the sediment load over the 3-year study period contributed during the eight largest storm events during that period. The Smith Creek total phosphorus load was approximately 21,000 pounds of phosphorus per year, with the majority of the load contributed during stormflow periods, although a substantial phosphorus load still occurs during base-flow conditions. The Smith Creek total nitrogen load was approximately 400,000 pounds per year, with total nitrogen accumulation less dominated by stormflow contributions (as was the case for sediment and total phosphorus) and strongly affected by base-flow export of nitrogen from the basin. Extensive water-quality monitoring throughout the Smith Creek watershed revealed how the complex geology and hydrology interacted to result in variable water chemistry. During relatively dry and low base-flow periods, much of the discharge in Smith Creek was contributed by a single dominant spring—Lacey Spring. During wetter base-flow periods, the flows in Smith Creek were largely generated by a mixture of headwater springs and forested mountain tributaries with very different geochemical composition. The headwater springs generally issued from limestone bedrock and were characterized as having relatively high nitrate, specific conductance, calcium, and magnesium, as well as relatively low concentrations of phosphorus, ammonium, iron, and manganese. The undeveloped, high-gradient, forested mountain sites were generally characterized by low ionic strength waters with low nutrient concentrations. Nitrate isotope data from the limestone springs generally were consistent with manure-derived nitrogen sources (such as cattle and poultry), although the possibility of other mixed sources cannot be excluded. Nitrate isotope data from the undeveloped, high-gradient forested mountain sites were more consistent with nitrogen from undisturbed soils, atmospheric deposition, or nitrogen fixation. Regardless of the nitrogen source, oxygen isotope data indicate that the nitrate was largely a result of nitrification. Land-use data indicate that manure sources of nitrogen dominated watershed nitrogen inputs. Phosphorus sources were less well studied. The presence of a single point-source discharge near the town of New Market contributed the majority of the phosphorus to Smith Creek under base-flow conditions, but nonpoint sources of phosphorus dominated the loading to Smith Creek during stormflow periods. Implementation of conservation practices increased in the Smith Creek watershed during the study period, and even though a broad range of practice types was implemented, the most common practices included stream fencing (for cattle exclusion), the development of nutrient management plans, conservation crop rotation, and the planting of cover crops. While the implementation of these conservation practices is encouraging, results indicate small increases in nitrate concentrations at the streamgage over the last 29 years, concurrent with small decreases in nitrate fluxes. It will likely be years before the cumulative effect of these practices can be detected in the Smith Creek water quality, and the magnitude of the effect of these conservation practices detected in Smith Creek will depend largely on whether nutrient loading (of manure and commercial fertilizer) is reduced over time. Upper Chester River The Upper Chester River watershed includes the 36-square-mile (mi 2 ) watershed area around several nontidal tributaries that drain into the tidal Chester River. The streamgage is on Chesterville Branch, the largest nontidal tributary (approximately 6.12 mi 2 ) and is the site for continuous water-quality monitoring for this project. The base-flow index at Chesterville Branch is about 72 percent and indicates that, as in most of the Coastal Plain, groundwater is the greatest contributor to streamflow. As such, more than 90 percent of the nitrogen in the stream is in the form of nitrate from groundwater. Continuous and discrete data collected at Chesterville Branch show the effects of streamflow and season on water quality. Significantly positive correlations with flow were observed for ammonium, dissolved and total phosphorus, sediment, and turbidity as runoff carried these constituents from the land surface into Chesterville Branch. Other constituents that increased significantly with flow include potassium, sulfate, iron, and manganese, which are likely contributed from near-stream areas and ponds with high organic-matter content. Total nitrogen, pH, and specific conductance, along with chemical constituents associated with groundwater inputs including nitrate, calcium, ratio of calcium to magnesium, silica, bicarbonate, and sodium, were negatively correlated with flow because concentrations of these constituents were diluted by runoff. Seasonal differences in water chemistry, which are most likely related to increased biologic effects on the uptake and release of chemicals in the stream and near-stream areas, also were observed. Water temperature, orthophosphate, δ 15 N of nitrate, bicarbonate, sodium, and the ratio of sodium to chloride were higher during the warm season, and dissolved oxygen, total nitrogen, nitrate, magnesium, sulfate, and manganese were higher during the cool season. Surrogate-regression models developed by using continuous water-quality data showed that the annual sediment load for the 2013 water year was about 2,600 tons, with more than 90 percent of this sediment contributed during two storms. The total phosphorus load in 2013 was about 13,000 pounds with more than 90 percent contributed during the same two storms as sediment. The load of total nitrogen, 140,000 pounds, accumulated steadily throughout the 2013 water year as nitrate in groundwater continuously discharged into the stream. The same two large storms that contributed 90 percent of the suspended-sediment and total phosphorus load only contributed about 20 percent of the annual total nitrogen load. Extensive water-quality monitoring of stream base flow throughout the Upper Chester River watershed identified how differences in land use and hydrogeology affected water chemistry. In parts of the watershed with well-drained soil and thick sandy aquifer sediments, concentrations of nitrate and other chemicals associated with fertilizer and lime application increased in streams as agricultural land use increased. More than 90 percent of the nitrogen in streams from these areas was in the form of nitrate, and concentrations ranged from about 5 milligrams per liter (mg/L) to 8 mg/L as nitrogen in the two largest tributaries. Stream nitrate concentrations were about 1 mg/L as nitrogen where soils were more poorly drained, the surficial aquifer sediments were thinner, and forests and wetlands were more widespread than agriculture. Nitrate isotope data were consistent with inorganic fertilizers ± atmospheric deposition and N 2 fixation as sources of nitrogen, and with nitrification as the dominant nitrate-forming process. Nitrate reduction was indicated by elevated δ 15 N and δ 18 O values in some samples from streams draining watersheds with poorly drained soils. An analysis of land-use data and SPARROW modeling input data attributed almost 90 percent of the nitrogen sources in the Upper Chester River watershed to inorganic fertilizer and fixation of atmospheric nitrogen by legumes, which is in agreement with the isotopic characteristics of nitrate in this watershed. Local sources of manure are limited in this area. Total phosphorus concentrations during base flow ranged from below detection to about 0.2 mg/L. Stream phosphorus concentrations during base flow were generally lower than those measured during storms because most phosphorus transport likely occurs as phosphorus attached to sediment particles during runoff. Because manure is not widely used in this area, the major source of phosphorus is likely fertilizer. The implementation of conservation practices in the Upper Chester River watershed increased substantially during the study period, with a total implementation of 1,194 U.S. Department of Agriculture-compliant practices. The most frequently used practices were oriented towards nutrient and sediment control, including cover crops, nutrient management planning, conservation crop rotation, conservation tillage, and irrigation management. The current Chesapeake Bay model for this area predicts that implementation of best management practices should result in a 13-percent decrease in overall delivery of nitrogen to the Upper Chester River. Because most nitrogen travels through the groundwater system for years to decades before being discharged to streams, the time period of monitoring was not sufficient to see the effects of these practices on water quality. The magnitude of the effect that may eventually be detected will depend on the degree to which nitrate leaching into the groundwater system is reduced over time. Loadings of phosphorus and sediment are primarily transported during large runoff events and are difficult to control and analyze for trends because of their timing and episodic nature. Conewago Creek Conewago Creek has two primary monitoring locations—one near the middle of the 47-mi 2 watershed and the other near the outlet just upstream of the Susquehanna River. The base-flow index was 47.3 percent for 2012–2013, indicating that on average, approximately 53 percent of the streamflow in Conewago Creek exited the watershed as surface flow, which suggests that the stormwater runoff was somewhat greater than groundwater discharge (base flow). A series of cluster and principal components analyses demonstrated that the majority of the variability in the Conewago Creek water quality could be attributed to hydrologic and seasonal variability. Statistically significant positive correlations with flow were observed at both monitoring sites for ammonium, total phosphorus, orthophosphate, iron, and manganese; additionally, at the upstream monitoring station, total nitrogen demonstrated a statistically significant positive correlation with flow. Statistically significant inverse correlations with flow were observed at both sites for water temperature, specific conductance (at the downstream site only), sulfate, chloride, calcium, and magnesium. Statistically significant seasonal patterns were observed for several water-quality constituents. Water temperature, phosphorus (upstream site only), and orthophosphate were higher during the warm season, and nitrate and total nitrogen (upstream site only) were higher during the cool season. Surrogate regression models were developed to compute sediment and nutrient load in Conewago Creek by using the continuous water-quality monitors and water-quality samples. Conewago Creek sediment load was approximately 9,900 tons in 2012 and approximately 18,900 tons in 2013, with nearly 80 percent of the sediment load in 2013 contributed by the three largest storm events. Annual total nitrogen loads could not be estimated due to poor model performance. The addition of continued monitoring or a continuously recording nitrate sensor could improve estimates of total nitrogen loads. During 2012 and 2013, phosphorus loads in Conewago Creek were approximately 50,000 pounds in each year. Combining data from one high-flow synoptic sampling with the data from routine sampling revealed how the geology and hydrology interact to result in variable water chemistry throughout the Conewago Creek watershed. The areas above the upstream gage in the headwaters are generally underlain by forested non-carbonate bedrock and are characterized by relatively low nitrate, specific conductance, calcium, and magnesium, as well as relatively low concentrations of phosphorus, ammonium, iron, and manganese. The more developed, agricultural areas below the upstream site were generally characterized by higher ionic strength waters with higher nutrient and metal concentrations. An analysis of land-use data and SPAtially Referenced Regressions On Watershed (SPARROW) modeling data indicates that manure sources of nitrogen dominate the input of nitrogen to the watershed. Implementation of conservation practices increased in the Conewago Creek watershed during the study period, and while a broad range of practice types were implemented, the most common practices included residue and tillage management, cover crops, nutrient management, terracing, and stream fencing (for animal exclusion or bank restoration). While the implementation of these conservation practices is encouraging, the cumulative effects of these practices probably will not be detected in Conewago Creek water quality for several years. The magnitude of the effects of these conservation practices on water quality in Conewago Creek will depend largely on the extent to which nutrient loading (septic, manure, and commercial fertilizer) and sediment-producing activities are reduced over time. Difficult Run The Difficult Run watershed is a 57.82-mi 2 watershed that drains to the Potomac River. The long-term Difficult Run base-flow index (from 1936 to 2010) was 57.9, indicating that approximately 58 percent of streamflow exited the watershed as base flow and 42 percent as stormflow; however, with continued development and urbanization of the watershed, the base-flow index has decreased to 50 percent during the last 20 years. This base-flow index was less than those of the other watersheds evaluated in this study, likely because the Difficult Run watershed largely is underlain by crystalline piedmont metamorphic rocks and has a greater proportion of impervious urban land cover. A series of cluster and principal components analyses indicated that most of the variability in Difficult Run water quality could be attributed to hydrologic variability and seasonality. Statistically significant positive correlations with flow were observed for turbidity, dissolved oxygen, suspended sediments, ammonium, orthophosphate, iron, and total phosphorus. Statistically significant inverse correlations with flow were observed for water temperature, pH, specific conductance, bicarbonate, calcium, magnesium, nitrate, δ 15 N of nitrate, and silica. Statistically significant seasonal patterns were observed for numerous water-quality constituents: water temperature, ammonium, orthophosphate, and δ 15 N of nitrate were higher during the warm season, and dissolved oxygen, nitrate, and manganese were higher during the cool season. Surrogate regression models were developed to compute sediment and nutrient loading rates. The Difficult Run sediment load was approximately 8,000 tons per year, with greater than 95 percent of the sediment load in the 2013 water year contributed by the seven largest storm events. The total phosphorus load in Difficult Run was approximately 14,000 pounds of phosphorus per year, with the majority of the load contributed during stormflow periods. The total nitrogen load in Difficult Run is estimated to have been approximately 140,000 pounds per year, with total nitrogen accumulation less dominated by stormflow contributions than that of phosphorus and strongly affected by base-flow export of nitrogen from the basin. Extensive water-quality monitoring throughout the Difficult Run watershed revealed relatively uniform generation of flow per unit of watershed area, as well as spatial variation in water quality that is strongly related to land-use activities. Elevated nitrate concentrations were observed in a subset of monitoring sites that are inversely correlated with population density and positively correlated to the septic system density within each subwatershed. The majority of the elevated nitrate concentrations for these sites are hypothesized to be caused by nitrate leaching from septic systems, more so than homeowner fertilizer usage among these subwatersheds that have lower population densities than other parts of the watershed. Nitrate isotope data, temporal patterns in the water-quality data, mass-balance computations, and a separate land-use analysis all generally indicate that leachate from septic systems was the likely source of the elevated nitrate. Another group of water-quality sites have relatively low nitrogen concentrations, are located in areas that are served by city sewer lines, and have experienced stream restoration activities. A final group of sites drained the areas with the highest imperviousness and had strongly elevated specific conductance, chloride, and sodium, which were likely caused by a combination of road salting and other anthropogenic sources draining these urbanized areas in the watershed. A fourth group of sites represents a mixture of water sources and had water quality similar to that at the Difficult Run streamgage. Analysis of the nitrate isotope data generally indicates a broad range of composition indicative of mixed natural and anthropogenic nitrogen sources. Implementation of conservation practices increased in the Difficult Run watershed during the study period, and while a broad range of practice types was implemented, the most common practices included stream restoration. While the implementation of these conservation practices is encouraging, the cumulative effect of these practices probably will not be detected in Difficult Run water quality for several years.

Maryland, Pennsylvania, Virginia↗

Spatiotemporal variability of inorganic nutrients during wastewater effluent dominated streamflow conditions in Indian Creek, Johnson County, Kansas, 2012–15

Nutrients, particularly nitrogen and phosphorus, are a leading cause of water-quality impairment in Kansas and the Nation. Indian Creek is one of the most urban drainage basins in Johnson County, Kansas, and environmental and biological conditions are affected by contaminants from point and other urban sources. The Johnson County Douglas L. Smith Middle Basin (hereinafter Middle Basin) wastewater treatment facility (WWTF) is the largest point-source discharge on Indian Creek. A second facility, the Tomahawk Creek WWTF, discharges into Indian Creek approximately 11.6 kilometers downstream from the Middle Basin WWTF. To better characterize the spatiotemporal variability of nutrients in Indian Creek, the U.S. Geological Survey, in cooperation with the Kansas Department of Health and Environment and Johnson County Wastewater, collected high-resolution spatial and temporal (a large number of samples collected over the entire reach or at single locations over a long period of time) inorganic nutrient (nitrate plus nitrite and orthophosphorus) data using a combination of discrete samples and sensor-measured data during 2012 through 2015. Nutrient patterns observed in Indian Creek along the upstream-downstream gradient during wastewater effluent dominated streamflow conditions were largely affected by the WWTFs and by travel time of the parcels of water. Nitrate plus nitrite concentrations in the Middle Basin WWTF effluent and at downstream sites varied by as much as 6 milligrams per liter over a 24-hour period. The cyclical variability in the Middle Basin WWTF effluent generated a nitrate plus nitrite pulse that could be tracked for approximately 11.5 kilometers downstream in Indian Creek, until the effect was masked by the Tomahawk Creek WWTF effluent discharge. All longitudinal surveys showed the same general patterns along the upstream-downstream gradient, though streamflows, wastewater effluent contributions to streamflow, and nutrient concentrations spanned a wide range. Differences in orthophosphorus and nitrate plus nitrite patterns were clear along the upstream-downstream gradient in Indian Creek, and orthophosphorus concentrations were not as variable as nitrate plus nitrite concentrations. In general, nitrate plus nitrite concentrations decreased downstream from the Middle Basin WWTF to minima near the confluence with Tomahawk Creek, increased downstream from the Tomahawk Creek WWTF, and then varied little within the study reach. Orthophosphorus concentrations generally decreased downstream from the Middle Basin WWTF. Despite the marked variability in nitrate plus nitrite concentrations caused by the Middle Basin WWTF effluent discharges, decreases in nitrate plus nitrite concentrations were discernable along the study reach between the two WWTFs. Decreases in nitrate plus nitrite concentrations along study reach were less variable than the cyclical variability typically measured, reiterating the effect of the Middle Basin WWTF effluent discharges on the spatiotemporal variability of nitrate plus nitrite in Indian Creek. Although decreases and rates of change in nitrate plus nitrite concentration were similar between the upper and lower reaches of Indian Creek, relations with initial nitrate plus nitrite concentrations and seasonal patterns were different between the upper (from College to the Marty study sites) and lower reaches (from Marty to the Mission Farms study sites) and did not reflect patterns observed for the overall reach. Quantifying the decreases in nitrate plus nitrite concentration caused by dilution and other in-stream processes were beyond the scope of this study, and were limited by available data. The data that are available suggest that dilution and other in-stream processes play a role in decreasing nitrate plus nitrite concentrations downstream from the Middle Basin WWTF in Indian Creek. Analysis of the spatiotemporal variability of nutrients focused on below-normal and normal streamflow conditions, when streamflow and nutrient conditions in Indian Creek were largely controlled by WWTF effluent flows and nutrient removal processes. Spatial and temporal data indicate there are decreases in nutrient concentrations along the upstream-downstream gradient in Indian Creek, but quantifying decreases is complicated by the variability in nutrient concentrations caused by the WWTFs. During below-normal and normal streamflow conditions, Indian Creek nutrient concentrations downstream from the Middle Basin WWTF primarily reflect effluent concentrations in the hours or days before depending on relative distance downstream.

Kansas↗

Response of currents and water quality to changes in dam operations in Hoover Reservoir, Columbus, Ohio, August 24–28, 2015

Hoover Reservoir, an important drinking water supply for the City of Columbus, Ohio, has been the source of a series of taste and odor problems in treated drinking water during the past few years. These taste and odor problems were caused by the compounds geosmin and 2-methylisoborneol, which are thought to have been related to cyanobacteria blooms. In an effort to reduce the phosphorus available for cyanobacteria blooms at fall turnover, the City of Columbus began experimenting with the dam’s selective withdrawal system to remove excess phosphorus in the hypolimnion, which is released from bottom sediments during summer anoxic conditions. The U.S. Geological Survey completed two synoptic survey campaigns to assess distributions of water quality and water velocity in the lower part of Hoover Reservoir to provide information on the changes to reservoir dynamics caused by changing dam operations. One campaign (campaign 1) was done while water was being withdrawn from the reservoir through the dam’s middle gate and the other (campaign 2) while water was being withdrawn through the dam’s lower gate. Velocities were measured using an acoustic Doppler current profiler, and water-quality parameters were measured using an autonomous underwater vehicle equipped with water-quality sensors. Along with the water-quality and water-velocity data, meteorological, inflow and outflow discharges, and independent water-quality data were compiled to monitor changes in other parameters that affect reservoir behavior. Monthly nutrient data, collected by the City of Columbus, were also analyzed for trends in concentration during periods of expected stratification. Based on the results of the two campaigns, when compared to withdrawing water through the middle gate, withdrawing water through the lower gate seemed to increase shear-driven mixing across the thermocline, which resulted in an increase in the depth of the epilimnion throughout the lower part of Hoover Reservoir. The observations from this study, if repeatable and driven primarily by changes in gate operations, can inform nutrient management strategies for Hoover Reservoir. Increased mixing across the thermocline may potentially supply nutrients from the hypolimnion to algae in the epilimnion. Although operation of the lower gate has the potential to export nutrients from the hypolimnion (where the concentrations of nutrients have typically been higher during summer months) through two mechanisms (direct withdrawal and mixing into the epilimnion), supply of nutrients to the epilimnion through enhanced mixing could lead to a short-term increase in algal populations. Therefore, further study is recommended to (1) test the repeatability of the results of gate changes on water-quality distributions and circulation patterns in lower Hoover Reservoir, (2) identify the immediate effect of gate changes on nutrient concentrations in the water column, and (3) identify the best management practices to reduce the nutrient storage in the hypolimnion of Hoover Reservoir without increasing the potential for nutrient transport to the highly productive epilimnion.

Ohio↗

Hydraulic modeling and flood-inundation mapping for the Huron River and Ore Lake Tributary, Livingston County, Michigan

Digital flood-inundation maps for an 8-mile (mi) reach of the Huron River near Hamburg, Michigan (station number 04172000), from downstream of Rickett Road to Strawberry Lake, were created by the U.S. Geological Survey (USGS), in cooperation with Green Oak and Hamburg Townships, Michigan, and the U.S. Army Corps of Engineers. The flood-inundation maps also include a 1.16-mi reach of the Ore Lake Tributary until it joins the Huron River, approximately 2.22 mi downstream of Rickett Road. The flood-inundation maps, which can be accessed through the USGS Flood Inundation Mapping Science website at http://water.usgs.gov/osw/flood_inundation/ , depict estimates of the areal extent and depth of flooding corresponding to selected water levels (stages) at the USGS streamgage on the Huron River near Hamburg, Michigan (station number 04172000). Near real-time stages at this streamgage may be obtained on the Internet from the USGS National Water Information System at http://waterdata.usgs.gov/ or the National Weather Service (NWS) Advanced Hydrologic Prediction Service at http:/water.weather.gov/ahps/ . The NWS Advanced Hydrologic Prediction Service also provides forecasted flood hydrographs at this website. Flood profiles were computed for the stream reach by means of a one-dimensional step-backwater model. The hydraulic model was calibrated by using the current stage-discharge relation at the Huron River near Hamburg, Mich., streamgage and was calibrated to water levels determined with stage sensors (pressure transducers) temporarily deployed along the stream reach. The hydraulic model was used to compute a set of water-surface profiles for flood stages ranging from 7.0 to 10.5 feet (ft). This range represents stages just above 6.0 (bankfull) to 2.04 ft above the maximum recorded stage at the USGS streamgage on the Huron River near Hamburg, Mich. (station number 04172000). The computed water-surface profiles were then combined with a Geographic Information System digital elevation model (derived from light detection and ranging [lidar] data having a 0.49-ft vertical accuracy and 3.8-ft horizontal resolution) to delineate the area flooded at each water level. The availability of these maps, along with Internet information regarding current stage and forecasted high-flow stages from the NWS, will provide emergency management personnel and residents with information critical for flood-response activities such as evacuations, road closures, and postflood recovery efforts.

Michigan↗

Geochemistry and microbiology of groundwater and solids from extraction and monitoring wells and their relation to well efficiency at a Federally operated confined disposal facility, East Chicago, Indiana

In cooperation with the U.S. Army Corps of Engineers, Chicago District, the U.S. Geological Survey investigated the processes affecting water quality, geochemistry, and microbiology in representative extraction and monitoring wells at a confined disposal facility (CDF) in East Chicago, Indiana. The CDF is a 140-acre Federally-managed facility that was the former location of an oil refinery and is now used for the long-term disposal and storage of dredge material from the Indiana Harbor and Indiana Harbor Canal. Residual petroleum hydrocarbons and leachate from the CDF are contained within the facility by use of a groundwater cutoff wall. The wall consists of a soil-bentonite slurry and a gradient control system made up of an automated network of 96 extraction wells, 42 monitoring wells, and 2 ultrasonic sensors that maintain an inward hydraulic gradient at the site. The pumps in the extraction wells require vigilant maintenance and must be replaced when unable to withdraw water at a rate sufficient to maintain the required inward gradient. The wells are screened in the Calumet aquifer, a coarse-grained sand and gravel unit that extends approximately 35 feet below the land surface and is not utilized for drinking-water supply at the CDF or in the surrounding area. This study was initiated to identify the cause of decreased pump discharges and to identify potential mitigation strategies. For this study, the U.S. Geological Survey collected groundwater and solids from monitoring and extraction wells. Groundwater samples were collected during June 2014 for precautionary health screening and on four occasions during September 2014 through November 2014. Groundwater samples collected from two extraction wells during June 2014 were analyzed for concentrations of anthropogenic organic constituents. During September through November 2014, groundwater samples were collected from one additional extraction well, and samples from three monitoring wells were analyzed for concentrations of inorganic and organic constituents, dissolved gases, and bacterial abundance and diversity. Solid samples were collected during April 2014, during September 2014 through November 2014, and during November 2016. Solid samples were collected from the exterior of extraction-well pumps and as flocculent from water samples. Solid samples were collected from 10 wells, including 1 extraction well and 3 monitoring wells sampled for water quality. Solid samples were analyzed for mineralogy, solid-phase habit, geochemistry, and organic composition. The following is a list of observations that were made during this study: (1) the water quality is substantially variable among the six well locations sampled as part of this study—lower (more negative) redox values and higher concentrations of many constituents (including calcium, magnesium, sodium, and sulfate) and properties (including dissolved solids, hardness, and turbidity) were detected in sampled wells located near the extraction wells with the highest frequency of failure; (2) water-level drawdown is variable between extraction wells—wells with the greatest drawdown may pull deeper groundwater into the borehole; (3) dissolved gas results indicate reducing oxidation-reduction processes in the aquifer material that can feasibly contribute iron, carbon dioxide, and other byproducts from hydrocarbon degradation to precipitates and solids that accumulate on and impair pump operation; (4) crystalline and amorphous solid-phase minerals are precipitating in the borehole; (5) several types of bacteria are present in water pumped from extraction wells and are likely responsible for bonding mineral and microbiologic matter to the pump (and other well components); and (6) bacteria may create microenvironments that facilitate precipitation of solids or inhibit dissolution of unstable minerals once the bacteria adhere to biofilm attached to the pump. Results of the study indicate that bacteria may be accumulating and entrapping solid material on the exterior of pumps. This accumulation reduces heat transfer and water discharge from the pump and may lead to decreased efficiency or mechanical failure. Observations could not be made on the well screen, gravel pack, or surrounding geologic formation; therefore, mitigating measures in the borehole may not solve well-productivity issues. Remedies for the pump fouling problems were derived from the review and interpretation of data collected during this study and from information documented in other sources about groundwater well fouling. Potential remedies to problems associated with pump fouling at the CDF may include the following: (1) reducing attractiveness of the extraction wells for microbiological growth by modifying the chemical or physical environment of the well, (2) modifying the pump exterior to decrease microbiological adherence, (3) changing the pumping regime to control the chemistry of water entering the well from the surrounding aquifer material, (4) modifying the pumps to be less physically and thermally attractive, and (5) removing hydrocarbons from groundwater and the aquifer material surrounding the wells or adding surfactants to make them more mobile. Pilot scale testing may be necessary to identify the most effective treatment or combination of treatments.

Indiana↗

Spatial and temporal variability of harmful algal blooms in Milford Lake, Kansas, May through November 2016

The U.S. Geological Survey, in cooperation with the Kansas Department of Health and Environment (KDHE), completed a study to quantify the spatial and temporal variability of cyanobacterial blooms in Milford Lake, Kansas, over a range of environmental conditions at various time scales (hours to months). A better understanding of the spatial and temporal variability of cyanobacteria and microcystin will inform sampling and management strategies for Milford Lake and for other lakes with cyanobacterial harmful algal bloom (CyanoHAB) issues throughout the Nation. Spatial and temporal variability were assessed in the upstream one-third of Milford Lake (designated as “Zone C” by KDHE) during May through November 2016 using a combination of time-lapse photography, continuous water-quality monitors, discrete phytoplankton, chlorophyll, and microcystin samples, and spatially dense near-surface data. Combined, these data were used to characterize variability of cyanobacterial abundance, algal biomass, and microcystin concentrations in Zone C of Milford Lake before, during, and after cyanobacterial blooms in 2016. Temporal patterns were evaluated during May through November 2016 using time-lapse photography at six locations in Zone C and at a single point location (the Wakefield site) using a combination of discrete and continuously measured water-quality data (including the cyanobacterial pigment phycocyanin). Based on time-lapse photography, CyanoHABs developed in Zone C of Milford Lake in early July and persisted through the end of November. Bloom accumulations at individual sites were dependent on wind direction. After a change in wind direction, it would take about 1 day for accumulations to become visible at different locations. During periods with low wind, accumulations were widespread and visible at all sites. Cyanobacteria were absent from the algal community at the Wakefield site in late May and were a minor component of the community in June; however, by mid-July the cyanobacteria were dominant and remained dominant until early November. Chlorophyll and microcystin concentrations at the Wakefield site were estimated using sensor-measured phycocyanin based on regression models developed for Zone C. Regression-estimated concentrations likely are more indicative of seasonal patterns in algal biomass (as indicated by chlorophyll concentrations) and microcystin than discretely collected samples because regression-estimated data have a much higher temporal resolution. Based on regression estimates, algal biomass and microcystin concentrations at the Wakefield site steadily increased from May through August. After August, concentrations decreased but remained relatively high compared to May and June. Daily chlorophyll maxima were as much as 400 times higher than daily minima, and daily microcystin maxima were as many as several orders of magnitude higher than daily minima. The extreme variability in algal biomass and microcystin concentrations at the Wakefield site reflects the development and dissipation of blooms, as indicated by the time-lapse cameras. Based on regression-estimated microcystin concentrations, the KDHE watch and warning thresholds for microcystin were exceeded during mid-June through late November. Exceedance of KDHE advisory thresholds often changed from no advisory to watch or warning over the course of the day because of the variability in algal biomass and microcystin concentrations caused by bloom development and dissipation. Continuous water-quality monitors may be useful in informing public-health decisions in lakes with variable CyanoHAB conditions; however, site-specific models need to be developed, and best practices for using continuous water-quality monitors to inform CyanoHAB management strategies need to be established. Spatial data were collected on May 26, July 21, and September 15, 2016, using a combination of a boat-mounted array and discrete water-quality samples analyzed for phytoplankton community composition and chlorophyll and microcystin concentrations. Spatial patterns were described using regression-estimated chlorophyll and microcystin concentrations. During the May 26, 2016, spatial surveys, cyanobacterial abundances were relatively low throughout Zone C and did not exceed KDHE guidance values compared to spatial surveys on July 21 and September 15. Regression-estimated chlorophyll concentrations were indicative of higher algal biomass uplake in Zone C, and decreases in the downlake direction towards Zone B. Regression-estimated chlorophyll concentrations also were more variable uplake than downlake. Based on regression estimates, microcystin concentrations did not exceed KDHE guidance values anywhere in Zone C on May 26. Spatial patterns in microcystin throughout Zone C did not match patterns in regression-estimated chlorophyll concentrations, likely because the algal community was not dominated by cyanobacteria at most locations in May. During the July 21, 2016, spatial surveys, cyanobacterial abundances in Zone C exceeded KDHE guidance values in 50 percent of samples. The algal community in Zone C was dominated by cyanobacteria at all locations except two, where cyanobacteria codominated with diatoms. Both locations where cyanobacteria and diatoms codominated were north of the causeway. Regression-estimated chlorophyll concentrations were indicative of higher algal biomass north of the causeway and on the eastern shore of Zone C. On July 21, algal biomass did not always decrease in the downlake direction. There was a decrease just south of the causeway but an increase shortly after with higher concentrations into Zone B. Spatial maps indicated changes in algal distribution at a 0.5-meter depth, with algae moving to the central part of the lake north of the causeway and along the eastern shore south of the causeway. Most regression-estimated microcystin concentrations on July 21 exceeded KDHE guidance values, reflecting the pervasive bloom conditions in Zone C during this period. Spatial patterns in regression-estimated microcystin concentrations throughout Zone C were similar to patterns seen in discrete samples and regression-estimated chlorophyll concentrations, with higher concentrations north of the causeway and on the east shore of Zone C. During the September 15, 2016, spatial surveys, cyanobacterial abundances did not exceed KDHE guidance values. The algal community north of the causeway was dominated by diatoms. The algal community throughout the rest of Zone C was dominated by cyanobacteria. Of regression-estimated microcystin concentrations on September 15, 80 percent did not exceed KDHE guidance values. Spatial patterns indicated northward movement of the cyanobacterial bloom consistent with a wind shift noted the previous day. On September 14, winds were generally from the north to northwest, shifting to the south by September 15. There was a northward progression of chlorophyll and microcystin during the spatial surveys. These data, along with the camera data and spatial and wind data from May and July, indicate that wind can be a major driver of the spatial and temporal variability of cyanobacterial blooms in Milford Lake and likely plays a role in the extent and duration of near-shore accumulations.

Kansas↗

An evaluation of methods for computing annual water-quality loads

The U.S. Geological Survey publishes information on the mass, or load, of water-quality constituents transported through rivers and streams sampled as part of the operation of the National Water Quality Network (NWQN). This study evaluates methods for computing annual water-quality loads, specifically with respect to procedures currently (2019) used at sites in the NWQN. Near-daily datasets of chloride, total nitrogen, nitrate plus nitrite, total phosphorus, and suspended sediment were subset to determine the accuracy of various load-estimation methods, including linear interpolation, ratio estimators, and linear and weighted-regression methods. Water-quality loads are computed under different sampling strategies and at multiple sampling sites to provide a more complete evaluation of load-estimation methods. Estimation methods were less accurate when computing loads at annual rather than decadal time steps. Depending on the water-quality constituent, annual loads were within comparable accuracy thresholds 21 to 64 percent of the time relative to decadal loads. The accuracy of annual load estimates varied among water-quality constituents, sampling strategies, sampling sites, and estimation methods. Methods were most accurate when estimating chloride and decreased in accuracy when estimating total nitrogen, nitrate plus nitrite, total phosphorus, and suspended-sediment loads. Estimation methods were most likely to compute accurate annual loads when samples were collected frequently (26 samples per year) and when sampling strategies targeted high-flow conditions. For a given water-quality constituent, estimation accuracy differed substantially among sampling sites; estimates were more likely to be accurate at large rivers with less variability in concentration and (or) discharge conditions and were less likely to be accurate at smaller stream sites with more variable streamflow and (or) water-quality concentrations. The Weighted Regressions on Time, Discharge, and Season method with Kalman filtering (WRTDS_K) generally produced the most accurate annual load estimates among sampling sites and water-quality constituents. Although WRTDS_K was the most accurate generally, every estimation method evaluated had the potential to produce accurate (and inaccurate) load estimates depending on the site, constituent, and water year. Linear interpolation and ratio estimators that used samples exclusively from the year being estimated were among the best performing methods for total nitrogen and nitrate plus nitrite loads but were among the least accurate when estimating annual total phosphorus and suspended-sediment loads. Ratio estimation that considered samples from previous years and stratified based on streamflow conditions produced among the most accurate total phosphorus estimates but was among the least accurate for other constituents. Regression-based methods that assumed linear or quadratic relations among the logarithm of water-quality concentrations and streamflow conditions were among the least accurate methods generally, whereas regression-based methods that considered cubic relations among the logarithm of concentration and streamflow and the Weighted Regressions on Time, Discharge, and Season (WRTDS) method were typically more accurate. Methods that adjusted daily estimates computed from regression or weighted-regression methods based on departures from sampled values, such as WRTDS_K and the composite method, improved estimate accuracy for most sites and constituents, but especially for chloride, total nitrogen, nitrate plus nitrite, and suspended-sediment estimates. Investigation of the underlying causes of estimation method bias indicated that sites and years with more variability in concentration and loading conditions, higher slopes in the relation of the logarithm of concentration and discharge, and sampling plans that underrepresented high-flow conditions generally led to less accurate load estimates. Finally, because all methods indicated the capacity to produce biased load estimates, additional work is needed to identify the capacity of new technologies, such as continuous water-quality sensors, to improve the accuracy of annual or shorter term load estimates. Based on findings in this report, the NWQN will continue to publish water-quality loads using LOADEST-based methods that consider multiple transformations of streamflow, as well as season, time, and variables indicative of historical streamflow conditions to maintain consistent methods for stakeholders. However, the NWQN also plans to begin publishing annual load estimates using the WRTDS_K method in 2020 because this method was determined to be the most accurate for a given site, constituent, and water year.

Scientific Investigations Report↗

Estimating sediment flux to Jamaica Bay, New York

Tidal wetland loss in Jamaica Bay, New York, is well documented. Maintaining wetlands is important from an environmental and ecological perspective and because wetlands buffer coastal communities from storm damage. An estimate of suspended-sediment flux through Rockaway Inlet is needed to improve understanding of sediment dynamics in Jamaica Bay and could be used in salt marsh restoration efforts. To estimate sediment flux, an index-velocity station and turbidity sensor were installed and operated in Rockaway Inlet near the mouth of Jamaica Bay from November 2014 to December 2016 and point and cross-sectional suspended-sediment samples were collected and analyzed. Index-velocity data coupled with cross-sectional acoustic Doppler current profiler measurements were used to develop an index-velocity rating. A simple linear regression rating with a strong coefficient of determination (R 2 of 0.981) was developed. Discharge was computed from the stage-area and index-velocity relations, and a low-pass Godin filter was used to remove the tidal aliasing. A second simple linear regression (R 2 of 0.75) between fixed-point suspended-sediment concentration (SSC) samples and turbidity allowed for the calculation of SSC through Rockaway Inlet, and then sediment flux was found by multiplying SSC and discharge for continuous (6-minute) data. Turbidity values were low in the near-ocean conditions at Rockaway Inlet, with daily means ranging from 0.6 to 8.2 formazin nephelometric units during the period of November 2014 through December 2016. During this time, computed daily mean suspended-sediment concentrations ranged from 3 to 13 milligrams per liter. High sediment loads generally occurred during incoming tides, during both storm and nonstorm conditions, suggesting a net inward sediment flux into Jamaica Bay. The fate of sediment after it enters Jamaica Bay was not investigated. Trends in sediment flux during major storms could not be evaluated because no major storms occurred during this investigation.

New York↗

A summary of water-quality monitoring in San Francisco Bay in water year 2017

This report summarizes the activities of the U.S. Geological Survey (USGS) San Francisco Bay Water-Quality Monitoring and Sediment Transport Project during water year 2017, including an explanation of methods employed, stations operated, and a graphical summary of data for the period of record for stations operational in water year 2017. In cooperation with partner agencies, the USGS maintains a network of sensors that continuously and autonomously measures water-quality parameters in San Francisco Bay including water temperature, specific conductance, turbidity, and suspended-sediment concentration. Data are collected at several locations in the estuary by a network of water-quality sondes sampled at 15-minute intervals. Methods of data collection are presented along with documentation of the regression models utilized to estimate suspended-sediment concentration from observed turbidity, a commonly utilized surrogate to estimate suspended-sediment concentration. The goals of the data collection effort are to (1) obtain long-term, high-frequency, and high-quality data to describe San Francisco Bay water quality; (2) make the data publicly available on the USGS National Water Information System data portal; and (3) help improve understanding of the spatial and temporal variability of water quality in the estuary, informing management decisions regarding restoration, water supply, navigation, and ecology.

California↗

Assessment of water-quality constituents monitored for total maximum daily loads in Johnson County, Kansas, January 2015 through December 2018

Stormwater discharges from municipalities are regulated by provisions in the Clean Water Act of 1972 to protect the Nation’s water resources from harmful pollutants. In 2014, the Kansas Department of Health and Environment issued new stormwater discharge permits for 17 municipalities in Johnson County, Kansas, in the northeastern part of the State. The county is largely suburban and has 20 municipalities within 22 watersheds. Municipalities in Johnson County are required to implement stormwater management programs that reduce discharges of pollutants, protect water quality, and satisfy applicable water-quality regulations. In 2015, the U.S. Geological Survey, in cooperation with the Johnson County Stormwater Management Program, began a 4-year monitoring program designed to meet new stormwater monitoring requirements for some municipalities in Johnson County. Additional data were collected to evaluate the usefulness of continuous water-quality monitoring and different sampling methods in assessing changes in water quality. Twelve of the 22 watersheds in the county were within the sampling network for this project. Discrete water-quality samples were collected at 25 stream sites and 2 lake sites using passive, grab, and equal-width increment sampling methods. Samples at all sites were analyzed for nutrients, Escherichia coli bacteria, total suspended solids, and suspended-sediment concentration. Ninety-nine percent of storm-event samples and 98 percent of low-flow samples were less than the Kansas Surface Water Quality Standard for nitrate plus nitrite. Eight percent of storm-event samples and 100 percent of low-flow samples were less than the total suspended solids screening value of 50 milligrams per liter. Passive samples generally had higher concentrations when compared to equal-width increment and grab samples, and grab samples and equal-width increment samples generally had similar concentrations. Continuous water-quality data were collected at one site. Ordinary least squares regression analysis was used to relate continuous (15-minute) water-quality sensor measurements to discretely sampled constituent concentrations at one site. Numerous factors affect water quality in urban runoff. Urban areas have many possible contaminant sources, including municipal and industrial wastewater discharges, stormwater runoff from impervious surfaces, and failing infrastructure. A better understanding of these factors can inform future monitoring efforts, leading to datasets that are representative of storm runoff and can be used to detect differences between sites and over time.

Kansas↗

Estimation of dissolved-solids concentrations using continuous water-quality monitoring and regression models at four sites in the Yuma area, Arizona and California, January 2017 through March 2019

Multiple linear regression models were developed to estimate dissolved-solids concentrations in water at four sites in the Yuma area between Imperial Dam, Arizona and California and the southerly international boundary with Mexico at San Luis, Arizona. Continuous and discrete water-quality data were collected at gaging stations in the Colorado River upstream from Imperial Dam, Arizona-California, the Colorado River below Cooper wasteway near Yuma, Arizona, the Yuma Main Drain above Arizona–Sonora, Mexico boundary, and the 242 lateral above Main Drain at the Arizona–Sonora boundary. Continuous specific conductance and water temperature data were collected at each site between January 2017 and March 2019. Bi-weekly to monthly dissolved-solids water samples were collected during the same period. Continuous specific conductance data collected at the Colorado River below Cooper wasteway were affected by poorly mixed streamflow during periods when the Pilot Knob Hydro-electric Plant was releasing water to the river. The continuous specific conductance data for the site downstream from Cooper wasteway were corrected using mean specific conductance values computed from cross-section measurements collected during site visits. Continuous specific conductance data were affected by sensor fouling issues at the 242 lateral site, and continued operation at the site would require more frequent visits for cleaning and service to ensure data quality. During the study, instream specific conductance readings ranged from 966 to 3,030 microsiemens per centimeter (μS/cm) at 25 degrees Celsius. Computed dissolved-solids concentrations from discrete samples ranged from 690 to 2,580 milligrams per liter (mg/L). Dissolved-solids concentrations were estimated from regression models using the optimal relation between dissolved solids and environmental factors, such as specific conductance, water temperature, dissolved oxygen, streamflow, and seasonality. Specific conductance was the primary factor at all four sites and explained 87.6 to 94 percent of variation in dissolved solids. Water temperature, as an indicator of seasonality, was determined to be a statistically significant secondary factor at both the Colorado River above Imperial Dam and Colorado River below Cooper wasteway sites explaining an additional 6.9 and 2.1 percent of variation in dissolved solids, respectively. Regression models explained 87.6 to 96.9 percent of the variation in dissolved solids; the root mean square error in the modeled data ranged between about 6 and 27 mg/L.

Arizona, California↗