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USGS1999

Estimation of nitrate contamination of an agro-ecosystem outwash aquifer using a nitrogen mass-balance budget

A mass-balance budget of N cycling was developed for an intensive agricultural area in west-central Minnesota to better understand NO3/- contamination of ground water in the Otter Tail outwash aquifer. Fertilizer, biological fixation, atmospheric deposition, and animal feed were the N sources, and crop harvests, animal product exports, volatilization from fertilizer and manure, and denitrification were the N sinks in the model. Excess N, calculated as the difference between the sources and sinks, was assumed to leach to ground water as NO3/-. The budget was developed using ground water data collected throughout the 212-km2 study area. Denitrification was estimated by adjusting its value so the predicted and measured concentrations of NO3/- in ground water agreed. Although biological fixation was the largest single N source, most was removed when crops were harvested, indicating that inorganic fertilizer was the primary source of N reaching the water table. It was estimated that denitrification removed almost half of the excess NO3/- that leached below the root zone. Even after accounting for denitrification losses, however, it was concluded that the ground water system was receiving approximately three times as much N as would be expected under background conditions.

Journal of Environmental Quality↗

USGS2016

Resource subsidies between stream and terrestrial ecosystems under global change

Streams and adjacent terrestrial ecosystems are characterized by permeable boundaries that are crossed by resource subsidies. Although the importance of these subsidies for riverine ecosystems is increasingly recognized, little is known about how they may be influenced by global environmental change. Drawing from available evidence, in this review we propose a conceptual framework to evaluate the effects of global change on the quality and spatiotemporal dynamics of stream–terrestrial subsidies. We illustrate how changes to hydrological and temperature regimes, atmospheric CO 2 concentration, land use and the distribution of nonindigenous species can influence subsidy fluxes by affecting the biology and ecology of donor and recipient systems and the physical characteristics of stream–riparian boundaries. Climate-driven changes in the physiology and phenology of organisms with complex life cycles will influence their development time, body size and emergence patterns, with consequences for adjacent terrestrial consumers. Also, novel species interactions can modify subsidy dynamics via complex bottom-up and top-down effects. Given the seasonality and pulsed nature of subsidies, alterations of the temporal and spatial synchrony of resource availability to consumers across ecosystems are likely to result in ecological mismatches that can scale up from individual responses, to communities, to ecosystems. Similarly, altered hydrology, temperature, CO 2 concentration and land use will modify the recruitment and quality of riparian vegetation, the timing of leaf abscission and the establishment of invasive riparian species. Along with morphological changes to stream–terrestrial boundaries, these will alter the use and fluxes of allochthonous subsidies associated with stream ecosystems. Future research should aim to understand how subsidy dynamics will be affected by key drivers of global change, including agricultural intensification, increasing water use and biotic homogenization. Our conceptual framework based on the match–mismatch between donor and recipient organisms may facilitate understanding of the multiple effects of global change and aid in the development of future research questions.

Global Change Biology↗

USGS2004

Simulated effects of pumping and drought on ground-water levels and the freshwater-saltwater interface on the north fork of Long Island, New York

Ground water is the sole source of freshwater on the North Fork of Long Island. Future demands for the limited freshwater supply during a prolonged drought could cause drawdowns that induce saltwater intrusion and render the supply unusable. The freshwater system on the North Fork contains several localized, hydraulically isolated aquifers bounded by salty water. The need for information on the ability of these aquifers to meet future demands prompted a 4-year study to develop a ground-water flow model to simulate several proposed pumping scenarios under long-term average conditions and during a hypothetical drought, and to delineate the resulting ground-water levels and movement of the freshwater-saltwater interface. The model code selected was SHARP, a quasi-three-dimensional finite-difference method of simulating freshwater and saltwater flow simultaneously. Two sets of four proposed pumping scenarios were evaluated. The first represented average recharge from precipitation during 2006-20; the second represented the same period and conditions except for a 5-year period of drought conditions. The average-recharge simulations used the long-term (1959-99) rate of recharge; the drought simulations applied a 20-percent reduction in recharge rate and a 20-percent increase in the 1999 rate of agricultural pumpage during 2011–15. The simulated movement of the freshwater-saltwater interface in future withdrawal and recharge scenarios indicates that the interface may rise beneath pumped wells at Inlet Drive, Brecknock Hall, Main Bayview Road, Islands End, North Road, and Alvah's Lane. Either (1) movement of the interface to within 50 feet of the well screen, (2) a large percent change in the distance between the interface and the well screen, or (3) movement of the interface through a clay layer is a cause for concern. Wellfields in which saltwater intrusion does not appear to be a cause for concern were those at Ackerly Pond, Kenney's Road, Middle Road, Rocky Point Road, and hypothetical sites where future wellfields have been proposed.

Water-Resources Investigations Report↗

USGS2007

Estimation of evapotranspiration by reed canarygrass using field observations and model simulations

Reed canarygrass (Phalaris arundinacea) commonly invades meadow wetlands, effectively dominating water use and outcompeting native plants. Objectives of this study were to (i) estimate daily, seasonal and annual water use by reed canarygrass using shallow water table fluctuations; and (ii) calibrate the ALMANAC (Agricultural Land Management Alternative with Numerical Assessment Criteria) model to accurately simulate water uptake by this grass. Using a groundwater well, the water table under an area in Iowa dominated by reed canarygrass was monitored hourly. Differences between water level measurements taken each hour were averaged to determine the hourly water table change in each month. Using these estimates of water use, the ALMANAC model was then calibrated to simulate plant transpiration values close to these water table use rates. Average monthly calculated daily plant water use rates were 3.3 mm d-1 in July and 2.3-2.8 mm d-1 in May, June, August, and September. Simulated bimonthly values for measured water use and plant transpiration simulated by the ALMANAC model differed by 14% or less. From May to October the mean ratio of measured to simulated values was 94%. Thus, the similarity between simulated plant transpiration and water use from the water table showed promise that this process-based model can realistically simulate water use under such grassland systems. ?? 2007 Elsevier B.V. All rights reserved.

Journal of Hydrology↗

USGS2010

Geohydrology of the Aucilla-Suwannee-Ochlockonee River Basin, south-central Georgia and adjacent parts of Florida

Major streams and tributaries located in the Aucilla-Suwannee-Ochlockonee (ASO) River Basin of south-central Georgia and adjacent parts of Florida drain about 8,000 square miles of a layered sequence of clastic and carbonate sediments and carbonate Coastal Plain sediments consisting of the surficial aquifer system, upper semiconfining unit, Upper Floridan aquifer, and lower confining unit. Streams either flow directly on late-middle Eocene to Oligocene karst limestone or carve a dendritic drainage pattern into overlying Miocene to Holocene sand, silt, and clay, facilitating water exchange and hydraulic connection with geohydrologic units. Geologic structures operating in the ASO River Basin through time control sedimentation and influence geohydrology and water exchange between geohydrologic units and surface water. More than 300 feet (ft) of clastic sediments overlie the Upper Floridan aquifer in the Gulf Trough-Apalachicola Embayment, a broad area extending from the southwest to the northeast through the center of the basin. These clastic sediments limit hydraulic connection and water exchange between the Upper Floridan aquifer, the surficial aquifer system, and surface water. Accumulation of more than 350 ft of low-permeability sediments in the Southeast Georgia Embayment and Suwannee Strait hydraulically isolates the Upper Floridan aquifer from land-surface hydrologic processes in the Okefenokee Basin physiographic district. Burial of limestone beneath thick clastic overburden in these areas virtually eliminates karst processes, resulting in low aquifer hydraulic conductivity and storage coefficient despite an aquifer thickness of more than 900 ft. Conversely, uplift and faulting associated with regional tectonics and the northern extension of the Peninsular Arch caused thinning and erosion of clastic sediments overlying the Upper Floridan aquifer southeast of the Gulf Trough-Apalachicola Embayment near the Florida-Georgia State line. Limestone dissolution in Brooks and Lowndes Counties, Ga., create karst features that enhance water-transmitting and storage properties of the Upper Floridan aquifer, promoting groundwater recharge and water exchange between the aquifer, land surface, and surface water. Structural control of groundwater flow and hydraulic properties combine with climatic effects and increased hydrologic stress from agricultural pumpage to yield unprecedented groundwater-level decline in the northwestern and central parts of the ASO River Basin. Hydrographs from continuous-record observation wells in these regions document declining groundwater levels, indicating diminished water-resource potential of the Upper Floridan aquifer through time. More than 24 ft of groundwater-level decline occurred along the basin's northwestern boundary with the lower Apalachicola-Chattahoochee-Flint River Basin, lowering hydraulic gradients that provide the potential for groundwater flow into the ASO River Basin and southeastward across the Gulf Trough-Apalachicola Embayment region. Slow-moving groundwater across the trough-embayment region coupled with downward-vertical flow from upper to lower limestone units composing the Upper Floridan aquifer resulted in 40-50 ft of groundwater-level decline since 1969 in southeastern Colquitt County. Multi-year episodes of dry climatic conditions during the 1980s through the early 2000s contributed to seasonal and long-term groundwater-level decline by reducing recharge to the Upper Floridan aquifer and increasing hydrologic stress by agricultural pumpage. Unprecedented and continued groundwater-level decline since 1969 caused 40-50 ft of aquifer dewatering in southeastern Colquitt County that reduced aquifer transmissivity and the ability to supply groundwater to wells, resulting in depletion of the groundwater resource.

Florida, Georgia↗

USGS2010

Estimation of the effects of land use and groundwater withdrawals on streamflow for the Pomperaug River, Connecticut

A precipitation runoff model for the Pomperaug River watershed, Connecticut was developed to address issues of concern including the effect of development on streamflow and groundwater recharge, and the implications of water withdrawals on streamflow. The model was parameterized using a strategy that requires a minimum of calibration and optimization by establishing basic relations between the parameter value and physical characteristics of individual hydrologic response units (HRUs) that comprise the model. The strategy was devised so that the information needed can be obtained from Geographic Information System and other general databases for Connecticut. Simulation of groundwater recharge enabled evaluation of the temporal and spatial mapping of recharge variation across the watershed and the spatial effects of changes in land cover on base flow and surface runoff. The modeling indicated that over the course of a year, groundwater provides between 60 and 70 percent of flow in the Pomperaug River; the remainder is generated by more rapid flow through the shallow subsurface and runoff from impermeable surfaces and saturated ground. Groundwater is recharged primarily during periods of low evapotranspiration in the winter, spring, and fall. The largest amount of recharge occurs in the spring in response to snowmelt. During floods, the Weekeepeemee and Nonnewaug Rivers (tributaries that form the Pomperaug River) respond rapidly with little flood peak attenuation due to flood-plain storage. In the Pomperaug River, flood-plain storage is more important in attenuating floods; abandoned quarry ponds (O&G ponds) adjacent to the river provide substantial flood storage above specific river stages when flow from the river spills over the banks and fills the ponds. Discharge from the ponds also helps to sustain low flows in the Pomperaug River. Similarly, releases from the Bronson-Lockwood reservoir sustain flow in the Nonnewaug River and tend to offset the effect of groundwater withdrawals from a well field adjacent to the river during periods of natural low flow. The model indicated that under the current zoning, future development could reduce low flows by as much as 10 percent at the 99 percent exceedance level (99 percent of flows are greater than or equal to this flow), but would not substantially increase the highest flows. Simulation of projected and hypothetical development in the watershed shows, depending on how stormwater is managed, that between 10 and 20 percent effective impervious area in an HRU results in streamflow becoming dominated by the surface-runoff component. This shift from a groundwater-dominated system would likely result in substantial changes in water quality and instream habitat characteristics of the river. Base flow to streams in the Pomperaug River watershed is reduced by both increased impervious surface and increased groundwater withdrawals. For the watershed as a whole, increasing groundwater withdrawals have the potential for causing greater overall reductions in flow compared to increased development and impervious surfaces. Additionally, on the basis of groundwater-modeling simulations, the projected increase in development across the watershed and, to a lesser extent the increase in groundwater withdrawals, will increase the number of local losing reaches experiencing dry conditions and the duration of these dry periods. The location of the losing reaches tends to be in areas near the transition from the uplands to the valley bottoms that are filled with coarse glacial stratified deposits. The simulated increase in the duration and extent of localized dry stream reaches is most sensitive to local increase in impervious surface. Conversion of land from forest or developed land cover to pasture or agricultural land increases groundwater recharge and discharge to streams, while at the same time increasing overall streamflow (the opposite effect as increased impervious surface). These resu

Scientific Investigations Report↗

USGS2006

Arsenic in ground water of the Western United States

Natural occurrences of ground water with moderate (10 to 50 micrograms per liter) to high (greater than 50 micrograms per liter) concentrations of arsenic are common throughout much of the Western United States. High concentrations of arsenic are generally associated with one of four geochemical environments: (1) basin-fill deposits of alluvial-lacustrine origin, particularly in semiarid areas, (2) volcanic deposits, (3) geothermal systems, and (4) uranium and gold-mining areas. These findings are based on an extensive literature review, compilation of unpublished reports and data, and the review of data bases containing more than 7,000 analyses of ground-water samples for arsenic. In the first two environments, arsenic appears to be associated with sediments derived, in part, from volcanic rocks of intermediate to acidic composition. Dissolved arsenic concentrations in water from volcanic aquifers in the same regions, however, may be low (less than 10 micrograms per liter). Solid phases (minerals, amorphous solids, and sedimentary organic matter) that supply the dissolved arsenic have not been identified in most areas. Alluvial and lacustrine sedimentary deposits appear to be an important source of arsenic in volcanic areas (such as Lane County, Oregon) and in areas underlain by basin-fill deposits (such as Carson Desert in Nevada and the Tulare Lake basin in California). Mobilization of arsenic in sedimentary aquifers may be, in part, a result of changes in the geochemical environment due to agricultural irrigation. In the deeper subsurface, elevated arsenic concentrations are associated with compaction caused by groundwater withdrawals.

Groundwater↗

USGS2005

Microbial responses and nitrous oxide emissions during wetting and drying of organically and conventionally managed soil under tomatoes

The types and amounts of carbon (C) and nitrogen (N) inputs, as well as irrigation management are likely to influence gaseous emissions and microbial ecology of agricultural soil. Carbon dioxide (CO2) and nitrous oxide (N2O) efflux, with and without acetylene inhibition, inorganic N, and microbial biomass C were measured after irrigation or simulated rainfall in two agricultural fields under tomatoes (Lycopersicon esculentum). The two fields, located in the California Central Valley, had either a history of high organic matter (OM) inputs ("organic" management) or one of low OM and inorganic fertilizer inputs ("conventional" management). In microcosms, where short-term microbial responses to wetting and drying were studied, the highest CO2 efflux took place at about 60% water-filled pore space (WFPS). At this moisture level, phospholipid fatty acids (PLFA) indicative of microbial nutrient availability were elevated and a PLFA stress indicator was depressed, suggesting peak microbial activity. The highest N 2O efflux in the organically managed soil (0.94 mg N2O-N m-2 h-1) occurred after manure and legume cover crop incorporation, and in the conventionally managed soil (2.12 mg N2O-N m-2 h-1) after inorganic N fertilizer inputs. Elevated N2O emissions occurred at a WFPS >60% and lasted <2 days after wetting, probably because the top layer (0-150 mm) of this silt loam soil dried quickly. Therefore, in these cropping systems, irrigation management might control the duration of elevated N2O efflux, even when C and inorganic N availability are high, whereas inorganic N concentrations should be kept low during times when soil moisture cannot be controlled.

Biology and Fertility of Soils↗

USGS1986

Irrigated acreage and other land uses on the Snake River Plain, Idaho and eastern Oregon

Prompted by the need for a current, accurate, and repeatable delineation of irrigated acreage on the Snake River Plain, the U.S. Geological Survey entered into a cooperative agreement with the Idaho Department of Water Resources Image Analysis Facility and the U.S. Bureau of Reclamation to delineate 1980 land use form Landsat data. Irrigated acreage data were needed as input to groundwater flow models developed by the U.S. Geological Survey in a study of the regional aquifer system underlying the Snake River Plain. Single-date digital multispectral scanner data analyzed to delineate land-use classes. Source of irrigation water (surface water, ground water, and combined) was determined from county maps of 1975 water-related land use, data from previous investigations, and field checking. Surface-water diversions for irrigation on the Snake River Plain began in the 1840's. With the stimulus of Federal aid authorized by the Desert Land Act, Carey Act, and Reclamation Act, irrigated area increased rapidly in the early 1900's. By 1929, 2.2 million acres were irrigated. Ground water became and important source of irrigation water after World War II. In 1980, about 3.1 million acres of the Snake River Plain were irrigate: 2.0 million acres with surface water, 1.0 million with ground water, and 0.1 million with combined surface and ground water. About 5.2 million acres (half of the plain) are undeveloped rangeland, 1.0 million acres (one-tenth) are classified as barren. The remaining land is a mixture of dryland agriculture, water bodies, wetland, forests, and urban areas.

Idaho;Oregon↗

USGS2016

Tracking domestic ducks: A novel approach for documenting poultry market chains in the context of avian influenza transmission

Agro-ecological conditions associated with the spread and persistence of highly pathogenic avian influenza (HPAI) are not well understood, but the trade of live poultry is suspected to be a major pathway. Although market chains of live bird trade have been studied through indirect means including interviews and questionnaires, direct methods have not been used to identify movements of individual poultry. To bridge the knowledge gap on quantitative movement and transportation of poultry, we introduced a novel approach for applying telemetry to document domestic duck movements from source farms at Poyang Lake, China. We deployed recently developed transmitters that record Global Positioning System (GPS) locations and send them through the Groupe Spécial Mobile (GSM) cellular telephone system. For the first time, we were able to track individually marked ducks from 3 to 396 km from their origin to other farms, distribution facilities, or live bird markets. Our proof of concept test showed that the use of GPS-GSM transmitters may provide direct, quantitative information to document the movement of poultry and reveal their market chains. Our findings provide an initial indication of the complexity of source-market network connectivity and highlight the great potential for future telemetry studies in poultry network analyses.

Poyang Lake↗

USGS2008

Historical Ground-Water Development in the Salinas Alluvial Fan Area, Salinas, Puerto Rico, 1900-2005

The Salinas alluvial fan area has historically been one of the most intensively used agricultural areas in the South Coastal Plain of Puerto Rico. Changes in agricultural practices and land use in the Salinas alluvial fan have also caused changes in the geographic distribution of ground-water withdrawals from the alluvial aquifer. As a result, the ground-water balance and ground-water flow pattern have changed throughout the years and may explain the presence of saline ground water along parts of the coast at present. By providing a reconstruction of historical ground-water development in the Salinas alluvial fan area, from the initial years of aquifer development at about 1900 to the most recent conditions existing in 2005, water resources managers and planners can use the results of the analysis for a more complete understanding of aquifer conditions especially pertaining to water quality. This study effort was conducted by the U.S. Geological Survey in cooperation with the Puerto Rico Department of Natural and Environmental Resources as a contribution in the management of the Jobos Bay National Estuarine Research Reserve. The study area encompasses about 20 mi2 (square miles) of the extensive South Coastal Plain alluvial aquifer system (fig. 1). The study area is bounded to the north by foothills of the Cordillera Central mountain chain, to the south by the Caribbean Sea, and to the east and west by the Rio Nigua de Salinas and the Quebrada Aguas Verdes, respectively. Fan-delta and alluvial deposits contain the principal aquifers in the study area.

Scientific Investigations Map↗

USGS2009

Geospatial data to support analysis of water-quality conditions in basin-fill aquifers in the southwestern United States

The Southwest Principal Aquifers study area consists of most of California and Nevada and parts of Utah, Arizona, New Mexico, and Colorado; it is about 409,000 square miles. The Basin-fill aquifers extend through about 201,000 square miles of the study area and are the primary source of water for cities and agricultural communities in basins in the arid and semiarid southwestern United States (Southwest). The demand on limited ground-water resources in areas in the southwestern United States has increased significantly. This increased demand underscores the importance of understanding factors that affect the water quality in basin-fill aquifers in the region, which are being studied through the U.S. Geological Survey's National Water-Quality Assessment (NAWQA) program. As a part of this study, spatial datasets of natural and anthropogenic factors that may affect ground-water quality of the basin-fill aquifers in the southwestern United States were developed. These data include physical characteristics of the region, such as geology, elevation, and precipitation, as well as anthropogenic factors, including population, land use, and water use. Spatial statistics for the alluvial basins in the Southwest have been calculated using the datasets. This information provides a foundation for the development of conceptual and statistical models that relate natural and anthropogenic factors to ground-water quality across the Southwest. A geographic information system (GIS) was used to determine and illustrate the spatial distribution of these basin-fill variables across the region. One hundred-meter resolution raster data layers that represent the spatial characteristics of the basins' boundaries, drainage areas, population densities, land use, and water use were developed for the entire Southwest.

Arizona, California, Colorado, Nevada, New Mexico,↗

USGS1999

The ecological condition of estuaries in the Gulf of Mexico

The Gulf of Mexico is a vast natural resource encompassing the coastal areas of western Florida, Alabama, Mississippi, Louisiana, and Texas, as well as a portion of Mexico. Many estuaries flow into the Gulf of Mexico and serve as nursery grounds for fish, habitat for a wide variety of wildlife, shipping routes, and a source of recreation. Estuarine-dependent species constitute more than 95 percent of the commercial fishery harvests from the Gulf of Mexico, and many important recreational fishery species depend on estuaries during some part of their life cycle. Gulf estuaries are diverse and productive ecosystems that provide a variety of valuable resources, including fish and shellfish, recreation, transportation, and water supply. Assessing the overall condition of Gulf of Mexico estuaries required incorporating data from other federal, state, and local monitoring programs to augment the information on ecological indicators collected by the U.S. Environmental Protection Agency’s (USEPA) Environmental Monitoring and Assessment Program (EMAP). The resulting document would provide a synthesis of the available knowledge about the condition of Gulf of Mexico estuaries. This document is intended for use by scientists and other citizens concerned with the ecological condition of estuaries, as well as by managers and lawmakers interested in the sustained use of estuaries for commercial and recreational purposes. It also addresses public concerns about the aesthetic quality of coastal areas vital to tourism and recreation. By producing this report on the ecological condition of estuaries in the Gulf of Mexico, we have taken one step in assessing the health of this environmental resource. We have produced an environmental “report card” to be used as a guide in the evaluation of management decisions and research directions. This report is organized in three parts: (1) an introduction that gives background information on the Gulf of Mexico, estuarine ecology, and the factors that impact estuaries in the gulf, (2) the main section on priority ecological indicators used to measure the condition of estuaries in the gulf and (3) an ecological report card that summarizes the data on ecological indicators and provides a rating of the condition of estuaries in each gulf state and for gulf estuaries overall. Many of the ratings were based on the percent area of estuaries in each state exhibiting degraded or adverse levels of an indicator. Eutrophication, a condition of high nutrients often resulting in low oxygen levels and other adverse effects, is an important water quality concern for estuaries along the gulf coast. The National Oceanic and Atmospheric Administration (NOAA) has compared the Gulf of Mexico to other coastal regions like the middle Atlantic and has ranked the Gulf of Mexico as having the highest number of point sources of nutrients and the highest percentage of land use devoted to agriculture. We evaluated monitoring data for nitrogen, chlorophyll, and dissolved oxygen as indicators of eutrophication. Although most of the estuaries exhibited high nitrogen or chlorophyll or low dissolved oxygen concentrations at least once during a survey, many times these conditions were observed in small rivers or bayous rather than in the entire estuary. Often, the percent area affected was low. The gulf estuaries had moderate conditions overall for nutrients and dissolved oxygen. Definite nutrient problems were observed in >25% of the estuarine area in Louisiana and Texas and definite dissolved oxygen problems were observed in Alabama. Contaminants in estuarine sediments provide evidence of the accumulation of chemicals from anthropogenic sources. We compared the concentrations of sediment contaminants to established guideline values to determine the proportion of estuarine area that could have potential adverse effects on living organisms. Although detectable levels of contaminants were measured in almost every estuary in the Gulf of Mexico, <25% of the estuarine area in all states had contaminant concentrations that exceeded these guidelines. Wetlands are integral parts of estuarine systems. Declining acreage means habitat loss that may be the result of commercial and residential development, hydrologic alterations, or dredge and fill operations. The Gulf of Mexico region contains more than 50% of the coastal wetland acreage in the U.S. and yet it also has the highest rate of coastal wetland loss. Nine of the top ten estuarine drainage areas ranked by total wetland area are in the Gulf of Mexico region. The most current estimates of total wetland loss over the past 200 years range from 41% to 54% for the gulf states. Although coastal wetlands continue to be altered or destroyed, some estimates indicate that the rate of loss has slowed. All gulf states were rated as having severe problems with wetland loss. The condition of benthic (bottom-dwelling) invertebrates, fish and shellfish, birds, and threatened and endangered species was used to evaluate the health of estuarine fauna. Degraded benthic communities inhabited <25% of the estuarine area in all gulf states except for Texas. Commercial fish and shellfish landings may be used as an indicator of population stability while fish biomarkers are used to measure the health of individuals in the population. Commercial landings of the top four fisheries (shrimp, menhaden, blue crab, and oyster) are stable in the gulf states while fish biomarkers indicate fair to poor fish health in Alabama and Texas and good fish health elsewhere. Coastal and marine bird populations appear to be in good condition throughout the gulf. Four threatened or endangered species inhabit coastal areas in the Gulf of Mexico: brown pelican, Gulf sturgeon, manatee, and Kemp’s ridley sea turtle. In general, populations of these species are in good to fair condition in the gulf states. Public health indicators include shellfish bed closures and chemicals found in edible fish tissue. Harvest of shellfish (primarily oyster in the Gulf of Mexico) is restricted or prohibited when concentrations of bacteria or other pathogens reach levels that could impair human health. The gulf states contain the most acreage of shellfish-growing waters in the U.S. but also have the most acreage restricted for harvest. All gulf states except Mississippi have >25% of their shellfish-growing waters restricted for harvest, mostly due to pollution from wastewater treatment plants or other upstream sources. Advisories may be issued that limit consumption when the concentrations of chemicals in fish tissue exceed levels known to be harmful to humans. Although seafood consumption advisories have been issued in all gulf states, the percent of the fish population with high concentrations of contaminants is relatively low in the gulf overall.

Alabama, Florida, Louisiana, Mississippi, Texas↗

USGS2007

Ground-water recharge in the arid and semiarid southwestern United States

Ground-water recharge in the arid and semiarid southwestern United States results from the complex interplay of climate, geology, and vegetation across widely ranging spatial and temporal scales. Present-day recharge tends to be narrowly focused in time and space. Widespread water-table declines accompanied agricultural development during the twentieth century, demonstrating that sustainable ground-water supplies are not guaranteed when part of the extracted resource represents paleorecharge. Climatic controls on ground-water recharge range from seasonal cycles of summer monsoonal and winter frontal storms to multimillennial cycles of glacial and interglacial periods. Precipitation patterns reflect global-scale interactions among the oceans, atmosphere, and continents. Large-scale climatic influences associated with El Niño and Pacific Decadal Oscillations strongly, but irregularly, control weather in the study area, so that year-to-year variations in precipitation and ground-water recharge are large and difficult to predict. Proxy data indicate geologically recent periods of naturally occurring multidecadal droughts unlike any in the modern instrumental record. Any anthropogenically induced climate change will likely reduce ground-water recharge through diminished snowpack at higher elevations. Future changes in El Niño and monsoonal patterns, both crucial to precipitation in the study area, are highly uncertain in current models. Current land-use modifications influence ground-water recharge through vegetation, irrigation, and impermeable area. High mountain ranges bounding the study area—the San Bernadino Mountains and Sierra Nevada to the west, and the Wasatch and southern Colorado Rocky Mountains to the east—provide external geologic controls on ground-water recharge. Internal geologic controls stem from tectonic processes that led to numerous, variably connected alluvial-filled basins, exposure of extensive Paleozoic aquifers in mountainous recharge areas, and distinct modes of recharge in the Colorado Plateau and Basin and Range subregions. The chapters in this professional paper present (first) an overview of climatic and hydrogeologic framework (chapter A), followed by a regional analysis of ground-water recharge across the entire study area (chapter B). These are followed by an overview of site-specific case studies representing different subareas of the geographically diverse arid and semiarid southwestern United States (chapter C); the case studies themselves follow in chapters D–K. The regional analysis includes detailed hydrologic modeling within the framework of a high-resolution geographic-information system (GIS). Results from the regional analysis are used to explore both the distribution of ground-water recharge for mean climatic conditions as well as the influence of two climatic patterns—the El Niño-Southern Oscillation and Pacific Decadal Oscillation—that impart a high degree of variability to the hydrologic cycle. Individual case studies employ a variety of geophysical and geochemical techniques to investigate recharge processes and relate the processes to local geologic and climatic conditions. All of the case studies made use of naturally occurring tracers to quantify recharge. Thermal and geophysical techniques that were developed in the course of the studies are presented in appendices. The quantification of ground-water recharge in arid settings is inherently difficult due to the generally low amount of recharge, its spatially and temporally spotty nature, and the absence of techniques for directly measuring fluxes entering the saturated zone from the unsaturated zone. Deep water tables in arid alluvial basins correspond to thick unsaturated zones that produce up to millennial time lags between changes in hydrologic conditions at the land surface and subsequent changes in recharge to underlying ground water. Recent advances in physical, chemical, isotopic, and modeling techniques have fostered new types of recharge assessments. Chemical and isotopic techniques include an increasing variety of environmental tracers that are useful and robust. Physically based techniques include the use of heat as a tracer and computationally intensive geophysical imaging tools for characterizing hydrologic conditions in the unsaturated zone. Modeling-based techniques include spatially distributed water-budget computations using high-resolution remotely sensed and ground-based geographic data. Application of these techniques to arid and semiarid settings in the southwestern United States reveals distinct patterns of recharge corresponding to geologic setting, climatic and vegetative history, and land use. Analysis of recharge patterns shows that large expanses of alluvial basin floors are drying out under current climatic conditions, with little to no recharge to underlying ground water. Ground-water recharge occurs mainly beneath upland catchments in which thin soils overlie permeable bedrock, ephemeral channels in which flow may average only several hours per year, and active agricultural areas. The chapters in this professional paper represent a coordinated attempt to develop a better understanding of one of the Nation's most critical yet difficult-to-quantify renewable resources.

Professional Paper↗

USGS2003

Photodegradation of roxarsone in poultry litter leachates

Arsenic compounds have been used extensively in agriculture in the US for applications ranging from cotton herbicides to animal feed supplements. Roxarsone (3-nitro-4-hydroxyphenylarsonic acid), in particular, is used widely in poultry production to control coccidial intestinal parasites. It is excreted unchanged in the manure and introduced into the environment when litter is applied to farmland as fertilizer. Although the toxicity of roxarsone is less than that of inorganic arsenic, roxarsone can degrade, biotically and abiotically, to produce more toxic inorganic forms of arsenic, such as arsenite and arsenate. Experiments were conducted on aqueous litter leachates to test the stability of roxarsone under different conditions. Laboratory experiments have shown that arsenite can be cleaved photolytically from the roxarsone moiety at pH 4-8 and that the degradation rate increases with increasing pH. Furthermore, the rate of photodegradation increases with nitrate and natural organic matter concentration, reactants that are commonly found in poultry-litter-water leachates. Additional photochemical reactions rapidly oxidize the cleaved arsenite to arsenate. The formation of arsenate is not entirely undesirable, because it is less mobile in soil systems and less toxic than arsenite. A possible mechanism for the degradation of roxarsone in poultry litter leachates is proposed. The results suggest that poultry litter storage and field application practices could affect the degradation of roxarsone and subsequent mobilization of inorganic arsenic species. ?? 2002 Elsevier Science B.V. All rights reserved.

Science of the Total Environment↗

USGS2003

Ground-water-quality assessment of shallow aquifers in the Front Range Urban Corridor, Colorado, 1954-98

Historical (1954-98) water-quality data for major ions, trace elements, major plant nutrients, and organic constituents collected in 3,870 sampling events at 2,138 shallow wells represent ground-water quality in shallow aquifers that underlie the Front Range Urban Corridor in Colorado. Nonparametric summary statistics and maps of concentrations across the study area indicate that ground water in the study area included fresh to saline water. Sulfate concentrations were elevated in the north and northeast parts of the study area, possibly due to Pierre Shale and Laramie Formation shale outcrops in those areas. Apart from isolated areas of known contamination, chloride concentrations were generally less than 100 milligrams per liter across the study area. Wells with elevated nitrate concentrations usually were located near rivers and streams downgradient from metropolitan areas. Elevated nitrate concentrations in wells that were not along the South Platte River were possibly from individual sewage disposal system usage or from fertilizer application to land. Spatial distribution for organic compounds for which more than 40 percent of the data were above the detection limit (atrazine, methyl-tert-butylether, and prometon) is not widespread across the study area, but this may reflect limitations of data availability. Summary statistics calculated or estimated by decade are influenced by the temporal variability of data across the study area. The median values of specific conductance, chloride, and nitrate from the 1970?s are less than values from the 1980?s and 1990?s, which, because most samples from the l970?s were collected in the western part of the study area, indicates that water quality in the western part of the study area is generally different than the rest of the study area. Chloride may be introduced to ground water from runoff of road deicers or chlorinated organics in transportation/transitional areas, where the median concentration is the greatest (85.0 milligrams per liter). Nitrate median concentrations are several times greater where the land is cultivated or used for agricultural business, which may reflect use of nitrogen fertilizers and the presence of animal feeding operations. Most inorganic and organic constituents exceeded drinking-water standards in only a small percentage of samples. Exceptions to this include sulfate; nitrate; trace elements aluminum, cadmium, iron, and manganese; and organic compounds 1,1-dichloroethylene, tetrachloroethylene, trichloroethylene, benzene, and dichloromethane.

Water-Resources Investigations Report↗

USGS2008

Detecting changes in riparian habitat conditions based on patterns of greenness change: A case study from the Upper San Pedro River Basin, USA

Healthy riparian ecosystems in arid and semi-arid regions exhibit shifting patterns of vegetation in response to periodic flooding. Their conditions also depend upon the amount of grazing and other human uses. Taking advantage of these system properties, we developed and tested an approach that utilizes historical Landsat data to track changes in the patterns of greenness (Normalized Difference Vegetation Index) within riparian zones. We tested the approach in the Upper San Pedro River of southeastern Arizona of the US, an unimpounded river system that flows north into the US from northern Mexico. We evaluated changes in the pattern of greenness in the San Pedro River National Conservation Area (SPRNCA), an area protected from grazing and development since 1988, and in a relatively unprotected area north of the SPRNCA (NA). The SPRNCA exhibited greater positive changes in greenness than did the NA. The SPRNCA also exhibited larger, more continuous patches of positive change than did the NA. These pattern differences may reflect greater pressures from grazing and urban sprawl in the NA than in the SPRNCA, as well as differences in floodplain width, depth to ground water, and base geology. The SPRNCA has greater amounts of ground and surface water available to support a riparian gallery forest than does the NA, and this may have influenced changes during the study period. Estimates of the direction of greenness change (positive or negative) from satellite imagery were similar to estimates derived from aerial photography , except in areas where changes were from one type of shrub community to another, and in areas with agriculture. Change estimates in these areas may be more difficult because of relatively low greenness values, and because of differences in soil moisture, sun-angle, and crop rotations among the dates of data collection. The potential for applying a satellite-based, greenness change approach to evaluate riparian ecosystem condition over broad geographic areas is also discussed.

Arizona↗

USGS2023

Mangrove habitat persistence and carbon vulnerability associated with increased nutrient loading and sea-level rise at Ding Darling National Wildlife Refuge (Sanibel Island, Florida, USA)

J.N. “Ding” Darling National Wildlife Refuge (DDNWR) is located on Sanibel Island along the southwestern coast of Florida, USA. Sanibel Island is heavily developed, but DDNWR provides protection for a large mangrove area that supports biodiversity and recreational opportunity. However, nitrogen (N) and phosphorus (P) eutrophication attributed to agriculture discharge along the Caloosahatchee River has affected the area’s aquatic habitat with algal blooms and may be causing untimely degradation of Sanibel’s mangrove forests. We launched a series of studies to understand how additional nutrient loading to the levels expected in the future might affect DDNWR’s mangrove resource. We experimentally fertilized selected mangrove forest areas with N fertilizer (+N; NH4) and P fertilizer (+P; P 2 O 5 ) for three years, and monitored soil surface elevation change, soil and pneumatophore CO 2 fluxes from respiration, mangrove tree sap flow from two species ( Avicennia germinans , Rhizophora mangle ), and individual tree and stand water use, from which we developed carbon (C) budgets for +N and +P vs. control simulations as applied to DDNWR’s 1112 ha mangrove area. Many of the measured response variables provided hints of subtle changes in response to +P rather than +N, which were compounded when scaled. From this, we found that additional P loading is expected to stimulate CO 2 uptake via net ecosystem exchange of C, likely pressing the system beyond metabolic capacity and leading to a projected 41% increase in lateral C export to the estuary. Additional lateral C export is concomitant to a reduction in vertical soil surface elevation with +P. Furthermore, an inability of DDNWR’s mangroves to bury additional P and a release of P-bound ions to lateral export may exacerbate estuarine eutrophication. We also modelled the effect of sea-level rise influences on DDNWR’s mangroves through 2100 using a soil cohort model (WARMER-Mangroves) and found that the mangroves may be resilient to current rates of sea-level rise into the future but may also be susceptible to moderate accelerations. Greater eutrophication could create additional vulnerabilities to mangrove submergence, especially to basin mangroves where P concentrations are high and already reducing soil surface elevations in some mangroves. Our results suggest that amelioration of current P concentrations and avoidance of additional P loading to Sanibel Island’s mangroves are management options to consider.

Florida↗