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USGS2013

Two-dimensional simulation of the June 11, 2010, flood of the Little Missouri River at Albert Pike Recreational Area, Ouachita National Forest, Arkansas

In the early morning hours of June 11, 2010, substantial flooding occurred at Albert Pike Recreation Area in the Ouachita National Forest of west-central Arkansas, killing 20 campers. The U.S. Forest Service needed information concerning the extent and depth of flood inundation, the water velocity, and flow paths throughout Albert Pike Recreation Area for the flood and for streamflows corresponding to annual exceedence probabilities of 1 and 2 percent. The two-dimensional flow model Fst2DH, part of the Federal Highway Administration’s Finite Element Surface-water Modeling System, and the graphical user interface Surface-water Modeling System (SMS) were used to perform a steady-state simulation of the flood in a 1.5-mile reach of the Little Missouri River at Albert Pike Recreation Area. Peak streamflows of the Little Missouri River and tributary Brier Creek served as inputs to the simulation, which was calibrated to the surveyed elevations of high-water marks left by the flood and then used to predict flooding that would result from streamflows corresponding to annual exceedence probabilities of 1 and 2 percent. The simulated extent of the June 11, 2010, flood matched the observed extent of flooding at Albert Pike Recreation Area. The mean depth of inundation in the camp areas was 8.5 feet in Area D, 7.4 feet in Area C, 3.8 feet in Areas A, B, and the Day Use Area, and 12.5 feet in Lowry’s Camp Albert Pike. The mean water velocity was 7.2 feet per second in Area D, 7.6 feet per second in Area C, 7.2 feet per second in Areas A, B, and the Day Use Area, and 7.6 feet per second in Lowry’s Camp Albert Pike. A sensitivity analysis indicated that varying the streamflow of the Little Missouri River had the greatest effect on simulated water-surface elevation, while varying the streamflow of tributary Brier Creek had the least effect. Simulated water-surface elevations were lower than those modeled by the U.S. Forest Service using the standard-step method, but the comparison between the two was favorable with a mean absolute difference of 0.58 feet in Area C and 0.32 feet in Area D. Results of a HEC-RAS model of the Little Missouri River watershed upstream from the U.S. Geological Survey streamflow-gaging station near Langley showed no difference in mean depth in the areas in common between the models, and a difference in mean velocity of only 0.5 foot per second. Predictions of flooding that would result from streamflows corresponding to annual exceedence probabilities of 1 and 2 percent indicated that the extent of inundation of the June 11, 2010, flood exceeded that of the 1 percent flood, and that for both the 1 and 2 percent floods, all of Areas C and D, and parts of Areas A, B, and the Day Use Area were inundated. Predicted water-surface elevations for the 1 and 2 percent floods were approximately 1 foot lower than those predicted by the U.S. Forest Service using a standard-step model.

Arkansas↗

USGS2017

Evaluation of long-term trends in hydrologic and water-quality conditions, and estimation of water budgets through 2013, Chester County, Pennsylvania

An evaluation of trends in hydrologic and water quality conditions and estimation of water budgets through 2013 was done by the U.S. Geological Survey in cooperation with the Chester County Water Resources Authority. Long-term hydrologic, meteorologic, and biologic data collected in Chester County, Pennsylvania, which included streamflow, groundwater levels, surface-water quality, biotic integrity, precipitation, and air temperature were analyzed to determine possible trends or changes in hydrologic conditions. Statistically significant trends were determined by applying the Kendall rank correlation test; the magnitudes of the trends were determined using the Sen slope estimator. Water budgets for eight selected watersheds were updated and a new water budget was developed for the Marsh Creek watershed. An average water budget for Chester County was developed using the eight selected watersheds and the new Marsh Creek water budget. Annual and monthly mean streamflow, base flow, and runoff were analyzed for trends at 10 streamgages. The periods of record at the 10 streamgages ranged from 1961‒2013 to 1988‒2013. The only statistically significant trend for annual mean streamflow was for West Branch Brandywine Creek near Honey Brook, Pa. (01480300) where annual mean streamflow increased 1.6 cubic feet per second (ft 3 /s) per decade. The greatest increase in monthly mean streamflow was for Brandywine Creek at Chadds Ford, Pa. (01481000) for December; the increase was 47 ft 3 /s per decade. No statistically significant trends in annual mean base flow or runoff were determined for the 10 streamgages. The greatest increase in monthly mean base flow was for Brandywine Creek at Chadds Ford, Pa. (01481000) for December; the increase was 26 ft 3 /s per decade. The magnitude of peaks greater than a base streamflow was analyzed for trends for 12 streamgages. The period of record at the 12 stream gages ranged from 1912‒2012 to 2004–11. Fifty percent of the streamgages showed a small statistically significant increase in peaks greater than the base streamflow. The greatest increase was for Brandywine Creek at Chadds Ford, Pa. (01481000) during 1962‒2012; the increase was 1.8 ft 3 /s per decade. There were no statistically significant trends in the number of floods equal to or greater than the 2-year recurrence interval flood flow. Twenty‒one monitoring wells were evaluated for statistically significant trends in annual mean water level, minimum annual water level, maximum annual water level, and annual range in water-level fluctuations. For four wells, a small statistically significant increase in annual mean water level was determined that ranged from 0.16 to 0.7 feet per decade. There was poor or no correlation between annual mean groundwater levels and annual mean streamflow and base flow. No correlation was determined between annual mean groundwater level and annual precipitation. Despite rapid population growth and land-use change since 1950, there appears to have been little or no detrimental effects on groundwater levels in 21 monitoring wells. Long-term precipitation and temperature data were available from the West Chester (1893‒2013) and Phoenixville, Pa. (1915‒2013) National Oceanic and Atmospheric Administration (NOAA) weather stations. No statistically significant trends in annual mean precipitation or annual mean temperature were determined for either station. Both weather stations had a significant decrease in the number of days per year with precipitation greater than or equal to 0.1 inch. Annual mean minimum and maximum temperatures from the NOAA Southeastern Piedmont Climate Division increased 0.2 degrees Fahrenheit (F) per decade between 1896 and 2014. The number of days with a maximum temperature equal to or greater than 90 degrees F increased at West Chester and decreased at Phoenixville. No statistically significant trend was determined for annual snowfall amounts. Data from 1974 to 2013 for three stream water-quality monitors in the Brandywine Creek watershed were evaluated. The monitors are on the West Branch Brandywine Creek at Modena, Pa. (01480617), East Branch Brandywine Creek below Downingtown, Pa. (01480870), and Brandywine Creek at Chadds Ford, Pa. (01481000). Statistically significant upward trends were determined for annual mean specific conductance at all three stations, indicating the total dissolved solids load has been increasing. If the current trend continues, the annual mean specific conductance could almost double from 1974 to 2050. The increase in specific conductance likely is due to increases in chloride concentrations, which have been increasing steadily over time at all three stations. No correlation was found between monthly mean specific conductance and monthly mean streamflow or base flow. Statistically significant upward trends in pH were determined for all three stations. Statistically significant upward trends in stream temperature were determined for East Branch Brandywine Creek below Downingtown, Pa. (01480870) and Brandywine Creek at Chadds Ford, Pa. (01481000). The stream water-quality data indicate substantial increases in the minimum daily dissolved oxygen concentrations in the Brandywine Creek over time. The Chester County Index of Biotic Integrity (CC-IBI) determined for 1998‒2013 was evaluated for the five biological sampling sites collocated with streamgages. CC-IBI scores are based on a 0‒100 scale with higher scores indicating better stream quality. Statistically significant upward trends in the CC-IBI were determined for West Branch Brandywine Creek at Modena, Pa. (01480617) and East Branch Brandywine Creek below Downingtown, Pa. (01480870). No correlation was found between the CC-IBI and streamflow, precipitation, or stream specific conductance, pH, temperature, or dissolved oxygen concentration. A Chester County average water budget was developed using the nine estimated watershed water budgets. Average precipitation was 48.4 inches, and average streamflow was 21.4 inches. Average runoff and base flow were 8.3 and 13.1 inches, respectively, and average evapotranspiration and estimation of errors was 27.2 inches."

Pennsylvania↗

USGS2012

Passage probabilities of juvenile Chinook salmon through the powerhouse and regulating outlet at Cougar Dam, Oregon, 2011

Cougar Dam near Springfield, Oregon, is one of several federally owned and operated flood-control projects within the Willamette Valley of western Oregon that were determined by the National Oceanic and Atmospheric Administration’s National Marine Fisheries Service in 2008 to impact the long-term viability of several salmonid stocks. In response to this ruling, the U.S. Army Corps of Engineers is looking for means to reduce impacts to salmonids, including improving downstream passage of juvenile salmonids at Cougar Dam. This study of juvenile Chinook salmon ( Oncorhynchus tshawytscha ) passage at Cougar Dam was conducted to inform decisions about potential improvements for downstream fish passage. The primary objective of the study was to estimate route-specific passage probabilities of yearling Chinook salmon at Cougar Dam. The study was conducted using fish from a nearby hatchery surgically implanted with radio transmitters and passive integrated transponder (PIT) tags and released near the entrance of a temperature control tower through which all water going through the dam must pass. Water passing through the temperature control tower may be routed through a penstock to a powerhouse with two Francis turbines, or to a spillway-like structure called the regulating outlet. Secondary objectives of the study were to estimate the probability that fish enter a bypass at a non-federal facility downstream, and to estimate dam-passage and in-river fish survival. Dam operating conditions during the study included an average forebay elevation of 1,580 feet (National Geodetic Vertical Datum of 1929) and an average of 48.2 percent of the total dam discharge of 1,106 cubic feet per second passing through a regulating outlet opening of 1.25 feet. Dam passage probability was greatest at night (0.8741 standard error [SE] 0.0265) and primarily through the regulating outlet (0.8896 SE 0.0617 day; 0.9417 SE 0.0175 night). The joint probability of entering the bypass at Leaburg Dam and being detected at the PIT system within the bypass was 0.0755 (SE 0.0363), but some fish were known to pass the PIT system undetected, indicating that the true probability of entering the bypass was underestimated. The estimated survival of fish passing through the temperature control tower, through the dam, and to a site at a bridge over the South Fork of the McKenzie River 3.9 kilometers downstream was 0.3680 (SE 0.1322) for fish passing through the powerhouse, and 0.4247 (SE 0.0440) for fish passing through the regulating outlet. The estimated in-river survival through the 37.3 kilometers from the bridge to a site at Leaburg Hatchery on the McKenzie River was 0.5857 (SE 0.2227) for fish that had passed through the powerhouse, and 0.4537 (SE 0.0551) for fish that had passed through the regulating outlet.

Oregon↗

USGS2012

Development of a flood-warning system and flood-inundation mapping in Licking County, Ohio

Digital flood-inundation maps for selected reaches of South Fork Licking River, Raccoon Creek, North Fork Licking River, and the Licking River in Licking County, Ohio, were created by the U.S. Geological Survey (USGS), in cooperation with the Ohio Department of Transportation; U.S. Department of Transportation, Federal Highway Administration; Muskingum Watershed Conservancy District; U.S. Department of Agriculture, Natural Resources Conservation Service; and the City of Newark and Village of Granville, Ohio. The inundation maps depict estimates of the areal extent of flooding corresponding to water levels (stages) at the following USGS streamgages: South Fork Licking River at Heath, Ohio (03145173); Raccoon Creek below Wilson Street at Newark, Ohio (03145534); North Fork Licking River at East Main Street at Newark, Ohio (03146402); and Licking River near Newark, Ohio (03146500). The maps were provided to the National Weather Service (NWS) for incorporation into a Web-based flood-warning system that can be used in conjunction with NWS flood-forecast data to show areas of predicted flood inundation associated with forecasted flood-peak stages. As part of the flood-warning streamflow network, the USGS re-installed one streamgage on North Fork Licking River, and added three new streamgages, one each on North Fork Licking River, South Fork Licking River, and Raccoon Creek. Additionally, the USGS upgraded a lake-level gage on Buckeye Lake. Data from the streamgages and lake-level gage can be used by emergency-management personnel, in conjunction with the flood-inundation maps, to help determine a course of action when flooding is imminent. Flood profiles for selected reaches were prepared by calibrating steady-state step-backwater models to selected, established streamgage rating curves. The step-backwater models then were used to determine water-surface-elevation profiles for up to 10 flood stages at a streamgage with corresponding streamflows ranging from approximately the 50 to 0.2-percent chance annual-exceedance probabilities for each of the 4 streamgages that correspond to the flood-inundation maps. The computed flood profiles were used in combination with digital elevation data to delineate flood-inundation areas. Maps of Licking County showing flood-inundation areas overlain on digital orthophotographs are presented for the selected floods. The USGS also developed an unsteady-flow model for a reach of South Fork Licking River for use by the NWS to enhance their ability to provide advanced flood warning in the region north of Buckeye Lake, Ohio. The unsteady-flow model was calibrated based on data from four flooding events that occurred from June 2008 to December 2011. Model calibration was approximate due to the fact that there were unmeasured inflows to the river that were not able to be considered during the calibration. Information on unmeasured inflow derived from NWS hydrologic models and additional flood-event data could enable the NWS to further refine the unsteady-flow model.

Ohio↗

USGS2006

Kendall-Theil Robust Line (KTRLine--version 1.0)-A Visual Basic Program for Calculating and Graphing Robust Nonparametric Estimates of Linear-Regression Coefficients Between Two Continuous Variables

The Kendall-Theil Robust Line software (KTRLine-version 1.0) is a Visual Basic program that may be used with the Microsoft Windows operating system to calculate parameters for robust, nonparametric estimates of linear-regression coefficients between two continuous variables. The KTRLine software was developed by the U.S. Geological Survey, in cooperation with the Federal Highway Administration, for use in stochastic data modeling with local, regional, and national hydrologic data sets to develop planning-level estimates of potential effects of highway runoff on the quality of receiving waters. The Kendall-Theil robust line was selected because this robust nonparametric method is resistant to the effects of outliers and nonnormality in residuals that commonly characterize hydrologic data sets. The slope of the line is calculated as the median of all possible pairwise slopes between points. The intercept is calculated so that the line will run through the median of input data. A single-line model or a multisegment model may be specified. The program was developed to provide regression equations with an error component for stochastic data generation because nonparametric multisegment regression tools are not available with the software that is commonly used to develop regression models. The Kendall-Theil robust line is a median line and, therefore, may underestimate total mass, volume, or loads unless the error component or a bias correction factor is incorporated into the estimate. Regression statistics such as the median error, the median absolute deviation, the prediction error sum of squares, the root mean square error, the confidence interval for the slope, and the bias correction factor for median estimates are calculated by use of nonparametric methods. These statistics, however, may be used to formulate estimates of mass, volume, or total loads. The program is used to read a two- or three-column tab-delimited input file with variable names in the first row and data in subsequent rows. The user may choose the columns that contain the independent (X) and dependent (Y) variable. A third column, if present, may contain metadata such as the sample-collection location and date. The program screens the input files and plots the data. The KTRLine software is a graphical tool that facilitates development of regression models by use of graphs of the regression line with data, the regression residuals (with X or Y), and percentile plots of the cumulative frequency of the X variable, Y variable, and the regression residuals. The user may individually transform the independent and dependent variables to reduce heteroscedasticity and to linearize data. The program plots the data and the regression line. The program also prints model specifications and regression statistics to the screen. The user may save and print the regression results. The program can accept data sets that contain up to about 15,000 XY data points, but because the program must sort the array of all pairwise slopes, the program may be perceptibly slow with data sets that contain more than about 1,000 points.

Techniques and Methods↗

USGS2009

Sidescan Sonar Imagery of the Escanaba Trough, Southern Gorda Ridge, Offshore Northern California

This map features sidescan imagery of the northern Escanaba (NESCA) site at the Escanaba Trough, southern Gorda Ridge, offshore northern California. The Escanaba Trough, a largely sediment-covered seafloor spreading center, contains at least six large massive sulfide deposits. It is a slow spreading center (2.5 cm/yr) with axial depths locally exceeding 3,300 m. Discrete igneous centers occur at 5- to 10-km intervals along this slow-spreading ridge. Basaltic magma intrudes the sediment fill of the axial valley, creating uplifted sediment hills, and, in some areas, erupts onto the sea floor. Large massive sulfide deposits occur along the margins of the uplifted sediment hills. The only active hydrothermal system is located on Central Hill where 220 deg C fluids construct anhydrite chimneys on pyrrhotite-rich massive sulfide mounds (Campbell and others, 1994). Central Hill is bounded by both ridge-parallel basement faults and a concentric set of faults that rim the top of the hill and may be associated with sill intrusion. Central Hill was one of the primary drill sites for Ocean Drilling Program (ODP) Leg 169. The sidescan sonar data (mosaics A, B, C, D) were collected aboard the National Oceanic and Atmospheric Administration (NOAA) research vessel Discoverer in the summer of 1996 with a 60-kHz system towed 100 to 200 m above the sea floor. Major faults and contacts are interpreted from the sidescan mosaics and 4.5-kHz seismic profiles collected simultaneously, as well as from previously conducted camera transects and submersible dives. The seismic profiles (lines 9, 11, 13) provide high-resolution subbottom structure and stratigraphy to a depth of about 50 m. In the sidescan images (mosaics A, B, C, D), bright areas denote high-energy returns from hard reflectors such as volcanic flows, sulfide deposits, or seafloor scarps. Dark areas denote low-energy returns and generally signify relatively undisturbed surface sediment. The grid lines mark one-minute intervals of latitude and longitude. The large sidescan sonar image (mosaic A) is centered on the NESCA igneous center. The spreading axis is flanked on either side by uplifted, sediment-covered terraces that show relatively continuous and undisturbed turbiditic sediment. These terraces bound the 4- to 5-km-wide neotectonic zone that is characterized by more closely spaced, small offset (<20 m) faults, volcanic flows (brightest area of backscatter), and areas where the seismic layering of the turbidites has been partially to completely disrupted by the intrusion of basaltic sills. The most prominent bathymetric features are the three uplifted sediment hills: Central Hill, Southwest Hill, and an unnamed uplifted hill to the north. These features are interpreted to be uplifted above large-volume basaltic intrusions emplaced near the basalt/sediment interface. Southwest Hill is adjacent to the zone of most recent faulting. This hill no longer retains the circular shape of the other hills due to slumps (lines 9, 11), which may have failed along faults related to the most recent spreading. Central Hill is interpreted to be the most recently uplifted sediment hill based on the morphology of the hill and the presence of an active hydrothermal system. The generally continuous area of volcanic basalt flow east of Central Hill appears as a distinct, bright sonar reflector stretching for approximately 6 km along axis (red contact on mosaic A). This flow may be related to the intrusion that is presumed to have uplifted Central Hill. Submersible observations indicate that lava flowed around the sediment hills and ponded against the eastern up-faulted turbidite-covered sediment terrace. Previously collected, deep-penetration seismic data indicate that the lavas overlie about 450 m of sediment (Morton and Fox, 1994). Late-stage emplacement of magma in the shallow subsurface beneath the exposed lava flow is interpreted to have domed the lava flow, forming the east-west-

Scientific Investigations Map↗

USGS2007

USGS Digital Spectral Library splib06a

Introduction We have assembled a digital reflectance spectral library that covers the wavelength range from the ultraviolet to far infrared along with sample documentation. The library includes samples of minerals, rocks, soils, physically constructed as well as mathematically computed mixtures, plants, vegetation communities, microorganisms, and man-made materials. The samples and spectra collected were assembled for the purpose of using spectral features for the remote detection of these and similar materials. Analysis of spectroscopic data from laboratory, aircraft, and spacecraft instrumentation requires a knowledge base. The spectral library discussed here forms a knowledge base for the spectroscopy of minerals and related materials of importance to a variety of research programs being conducted at the U.S. Geological Survey. Much of this library grew out of the need for spectra to support imaging spectroscopy studies of the Earth and planets. Imaging spectrometers, such as the National Aeronautics and Space Administration (NASA) Airborne Visible/Infra Red Imaging Spectrometer (AVIRIS) or the NASA Cassini Visual and Infrared Mapping Spectrometer (VIMS) which is currently orbiting Saturn, have narrow bandwidths in many contiguous spectral channels that permit accurate definition of absorption features in spectra from a variety of materials. Identification of materials from such data requires a comprehensive spectral library of minerals, vegetation, man-made materials, and other subjects in the scene. Our research involves the use of the spectral library to identify the components in a spectrum of an unknown. Therefore, the quality of the library must be very good. However, the quality required in a spectral library to successfully perform an investigation depends on the scientific questions to be answered and the type of algorithms to be used. For example, to map a mineral using imaging spectroscopy and the mapping algorithm of Clark and others (1990a, 2003b), one simply needs a diagnostic absorption band. The mapping system uses continuum-removed reference spectral features fitted to features in observed spectra. Spectral features for such algorithms can be obtained from a spectrum of a sample containing large amounts of contaminants, including those that add other spectral features, as long as the shape of the diagnostic feature of interest is not modified. If, however, the data are needed for radiative transfer models to derive mineral abundances from reflectance spectra, then completely uncontaminated spectra are required. This library contains spectra that span a range of quality, with purity indicators to flag spectra for (or against) particular uses. Acquiring spectral measurements and performing sample characterizations for this library has taken about 15 person-years of effort. Software to manage the library and provide scientific analysis capability is provided (Clark, 1980, 1993). A personal computer (PC) reader for the library is also available (Livo and others, 1993). The program reads specpr binary files (Clark, 1980, 1993) and plots spectra. Another program that reads the specpr format is written in IDL (Kokaly, 2005). In our view, an ideal spectral library consists of samples covering a very wide range of materials, has large wavelength range with very high precision, and has enough sample analyses and documentation to establish the quality of the spectra. Time and available resources limit what can be achieved. Ideally, for each mineral, the sample analysis would include X-ray diffraction (XRD), electron microprobe (EM) or X-ray fluorescence (XRF), and petrographic microscopic analyses. For some minerals, such as iron oxides, additional analyses such as Mossbauer would be helpful. We have found that to make the basic spectral measurements, provide XRD, EM or XRF analyses, and microscopic analyses, document the results, and complete an entry of one spectral library sample, all takes about

Data Series↗

USGS2014

Low-altitude photographic transects of the Arctic Network of National Park Units and Selawik National Wildlife Refuge, Alaska, July 2013

During July 16–18, 2013, low-level photography flights were conducted (with a Cessna 185 with floats and a Cessna 206 with tundra tires) over the five administrative units of the National Park Service Arctic Network (Bering Land Bridge National Preserve, Cape Krusenstern National Monument, Gates of the Arctic National Park and Preserve, Kobuk Valley National Park, and Noatak National Preserve) and the U.S. Fish and Wildlife Service’s Selawik National Wildlife Refuge in northwest Alaska, to provide images of current conditions and prevalence of land-cover types as a baseline for measuring future change, and to complement the existing grid-based sample photography of the region. Total flight time was 17 hours, 46 minutes, and total flight distance was 2,590 kilometers, at a mean altitude of about 300 meters above ground level. A total of 19,167 photographs were taken from five digital camera systems: 1. A Drift® HD-170 (focal length 5.00 mm); 2. A GoPro® Hero3 Black Edition (focal length 2.77 mm); 3. A Panasonic® Lumix DMC-FZ200 (24× superzoom with variable focal length); 4. A Panasonic® Lumix DMC-SZ7 (10x superzoom with variable focal length); and 5. A Canon® Rebel 3Ti with a Sigma zoom lens (18–200 mm focal length). The Drift® HD-170 and GoPro® Hero3 cameras were secured to the struts and underwing for nadir (direct downward) imaging. The Panasonic® and Canon® cameras were each hand-held for oblique-angle landscape images, shooting through the airplanes’ windows, targeting both general landscape conditions as well as landscape features of special interest, such as tundra fire scars and landslips. The Drift® and GoPro® cameras each were set for time-lapse photography at 5-second intervals for overlapping coverage. Photographs from all cameras (100 percent .jpg format) were date- and time-synchronized to geographic positioning system waypoints taken during the flights, also at 5-second intervals, providing precise geotagging (latitude-longitude) of all files. All photographs were adjusted for color saturation and gamma, and nadir photographs were corrected for lens distortion for the Drift® and GoPro® cameras’ 170° wide-angle distortion. EXIF (exchangeable image file format) data on camera settings and geotagging were extracted into spreadsheet databases. An additional 1 hour, 20 minutes, and 43 seconds of high-resolution videos were recorded at 60 frames per second with the GoPro® camera along selected transect segments, and also were image-adjusted and corrected for lens distortion. Geotagged locations of 12,395 nadir photographs from the Drift® and GoPro® cameras were overlayed in a geographic information system (ArcMap 10.0) onto a map of 44 ecotypes (land- and water-cover types) of the Arctic Network study area. Presence and area of each ecotype occurring within a geographic information system window centered on the location of each photograph were recorded and included in the spreadsheet databases. All original and adjusted photographs, videos, geographic positioning system flight tracks, and photograph databases are available by contacting ascweb@usgs.gov.

Alaska↗

USGS1975

Reclamation by tubewell drainage in Rechna Doab and adjacent areas, Punjab region, Pakistan

Around the turn of the century, a network of more than 40,000 miles of canals was constructed to divert water from the Indus River and its tributaries to about 23 million acres of largely unused desert in the Punjab region of Pakistan. The favorable climate and the perennial supply of irrigation water made available through the canals instituted the beginning of intensive farming. However, because of generally poor drainage and the high rate of canal leakage, the water table began to rise. As the population increased and agriculture expanded, the demand for irrigation water soon exceeded the available supply. Spreading of the canal supply to meet the expanded needs locally created shortages that prevented adequate leaching. Increased evaporation from the rising water table further contributed to the progressive accumulation of soluble salts in the soil. By the late 1930's the combined effect of waterlogging and salinity had reduced the agricultural productivity of the region to one of the lowest in the world. In 1954, after several unsuccessful projects were undertaken to reclaim affected areas and to stop the progressive encroachment of waterlogging and salinization, the Government of Pakistan in cooperation with the U.S. International Cooperation Administration undertook a study of the geology and hydrology of the Indus Plain that ultimately resulted in the formulation of a ground-water reclamation program. The principal feature of the program is the utilization of a network of deep wells spaced about a mile apart for the dual purpose of lowering the water table and for providing supplemental irrigation water. Through financial assistance and technical and engineering support principally from the United States, construction began in 1960 on the first of 18 proposed reclamation projects that eventually will include 21 million acres and more than 28,000 wells having an installed capacity of more than 100,000 cubic feet per second. An area of about 1.3 million acres a few miles west of the City of Lahore was selected for the pilot project. The first Salinity Control and Reclamation Project (SCARP-l) was completed in 1962. Within the project area about 2,000 wells were drilled as deep as 350 feet and equipped with turbine pumps having a capacity of up to 5 cubic feet per second each and a combined operating capacity of about 3.5 million acre-feet per year. To July 1968 pumping from project wells and from private and other governmental agency wells supplied about 12 million acre-feet of water. This pumping more than doubled the available irrigation supply and lowered the water table to a depth of 10 feet or more below most of the project area. As a result, approximately 66 percent of the 400,000 acres of land damaged by waterlogging and accumulation of excessive salt was wholly or partially reclaimed. The cropping intensity was increased from about 77 percent in 1962 to 101 percent in July 1968, and the annual value of crops increased 186 percent over 1962. Annual water budgets for the first 6 years of project operation indicate that pumping caused a decrease in annual ground-water outflow from the project area from about 57,000 acre-feet to 32,000 acre-feet, caused an increase in annual ground-water inflow to the project area from 35,0'00 acre-feet to 52,000 acre-feet, and depleted about 1.71 million acre-.feet of groundwater storage. Net annual recharge to the ground-water reservoir during this same period ranged from a high of slightly more than 2 million acre-feet in 1964 to a low of about 1 million acre-feet in 1965. The budgets suggest that perhaps as much as half the net canal' inflow to the project area is lost through leakage. This leakage is the principal source of recharge to the ground-water reservoir. Pumping has caused widespread changes in the chemical quality of ground water by chanelling the rate and direction of flow, inducing infiltration from canals, and mixing of indigenous waters of dif

Water Supply Paper↗

USGS2016

Depth calibration of the Experimental Advanced Airborne Research Lidar, EAARL-B

Introduction The original National Aeronautics and Space Administration (NASA) Experimental Advanced Airborne Research Lidar (EAARL) was extensively modified to increase the spatial sampling density and to improve performance in water ranging from 3 to 44 meters (m). The new (EAARL-B) sensor features a higher spatial density that was achieved by optically splitting each laser pulse into three pulses spatially separated by 1.6 m along the flight track and 2.0 m across the flight track, on the water surface when flown at a nominal altitude of 300 m (984 feet). The sample spacing can be optionally increased to 1.0 m across the flight track. Improved depth capability was achieved by increasing the total peak laser power by a factor of 10 and by designing a new “deep-water” receiver, which is optimized to exclusively receive refracted and scattered light from deeper water (15–44 m). Two different clear-water flight missions were conducted over the U.S. Navy's South Florida Testing Facility (SFTF) to determine the EAARL-B calibration coefficients. The SFTF is an established lidar calibration range located in the coastal waters southeast of Fort Lauderdale, Florida. We used 23 selected polygons at 23 distinct depths to compare a reference dataset from this site to determine EAARL-B calibration constants over the depth range of 6.5 to 34 m. We also conducted a near-simultaneous single-beam jet-ski-based sonar survey of selected transects ranging from 1 to 33 m depth in the same area. The near-concurrent jet ski data were used to evaluate the EAARL-B performance over the depth range from 0.9 to 10 m. The more timely jet ski data were necessary because the primary reference dataset was 9 years old, and areas shallower than 6.5 m are dominated by shifting sand. We determined the jet ski data were not useful as a calibration reference in water deeper than 10 m due to large uncertainty in the vertical measurement introduced by the lack of any sensor orientation data, that is, for pitch, roll, and heading to correct the measured slant range to a vertical measurement. The resulting calibrated EAARL-B data were then analyzed and compared with the original reference dataset, the jet-ski-based dataset from the same Fort Lauderdale site, as well as the depth-accuracy requirements of the International Hydrographic Organization (IHO). We do not claim to meet all of the IHO requirements and standards. The IHO minimum depth-accuracy requirements were used as a reference only and we do not address the other IHO requirements such as “ Full Seafloor Search”. Our results show good agreement between the calibrated EAARL-B data and all reference datasets, with results that are within the 95 percent depth accuracy of the IHO Order 1 (a and b) depth-accuracy requirements.

Open-File Report↗

USGS2023

Gulf Islands National Seashore regional sediment budget research and data needs—Workshop series summary

Executive Summary The National Park Service (NPS), in collaboration with the U.S. Geological Survey (USGS), recognizes the need to quantify the sediment budget of the barrier islands within the Gulf Islands National Seashore (GINS) to understand the coastal processes affecting island resiliency. To achieve this goal, identifying and quantifying the physical parameters that drive long-term change is necessary to model the processes that are both generative and terminal in island evolution and capture island response to long-term human alteration and climatic patterns. For example, measuring change across periods of storminess is more effective at assessing island resiliency than measuring change resulting from a single storm impact. Understanding changes to the physical environment over time is key to successfully predicting island responses to future storm impacts, human alteration, and sea-level rise and is necessary for effective decision making and management response. Yet, the diversity of factors affecting natural and cultural resources necessitates a strategic approach to data collection priorities that can inform sediment budget quantification and integrated resource management. This study sought to advance sediment budget modeling efforts by conducting a “Needs Assessment Workshop” at the GINS. The purpose of the workshop was to identify and prioritize the specific research and data needs regarding the sediment budget at the GINS that can enhance the NPS efforts to conserve the islands’ natural resources, cultural resources, and the facilities and infrastructure that support both conservation and visitor use of those resources. This effort explored two research questions: (1) “what research and data needs exist for the sediment budget at Gulf Islands National Seashore” (research question 1) and (2) “how can research to address these needs capitalize on regional partnerships to advance natural and cultural resource conservation at Gulf Islands National Seashore” (research question 2)? The workshop was conducted virtually in a two-part, two-day series. The workshop series was organized by researchers from North Carolina State University in collaboration with NPS and USGS staff and was facilitated by National Oceanographic and Atmospheric Administration staff. The workshop series (two paired, sequential, partial-day workshops) addressed two target audiences: (1) NPS and USGS staff (April workshop) and (2) regional Federal, State, county, and nongovernmental organization staff, including NPS and USGS staff (May workshop). A total of four workshop sessions were held, comprising two sessions with each target audience. The workshop series intended to identify sediment management research and data needs that could enhance natural and cultural resource stewardship at the GINS. One objective was to share information about regional sediment transport and management, available sediment management plans, and predictive modeling capabilities, including geomorphologic and hydrodynamic predictive models. This information was shared through a series of presentations by park managers and NPS and USGS researchers that identified park issues and available capabilities and data. The second objective was to elicit research and data needs, with a primary goal of assessing the importance and urgency of the identified needs. This assessment was partly determined by requesting that the workshop participants identify and prioritize research themes through polls, comments, and discussion. The polls explicitly asked participants to qualitatively evaluate the importance (not at all, slightly, somewhat, very, or extremely) and urgency (not at all, slightly, somewhat, very, or extremely) of the thematically grouped research and data needs. These evaluations were plotted and shared during the workshop to visualize how the relative importance ( x -axis) and relative urgency ( y -axis) of each “need,” relative to other needs, to identify the most necessary (importance) and time-sensitive (urgent) items, thereby allowing an enhanced, holistic understanding of the sediment budget at GINS. Results of the poll are published as a USGS data release. The assessment results revealed that the most important and urgent research and data needs included mapping (for example, elevation, habitat, and cultural resources), a regional sediment budget and management plan, and the dynamic modeling of sediment processes. During the workshop, these issues were visualized using scatter plots to demonstrate the relative importance and urgency of each theme, provide descriptive statistics, and elicit discussion. This format of iterative presentation, discussion, and prioritization allowed the project team to effectively accomplish their objective of identifying important and urgent research needs for natural and cultural resource stewardship at the GINS. Through the workshop, it was determined that expanded communication with the broader research community was needed to coordinate research activities and streamline potential funding opportunities and that research and policy should be integrated through a structured decision-making process. At the conclusion of the workshop, an administered poll showed that the presentations effectively identified data and research needs and that the goals of the workshop were achieved. The results suggest that this type of needs-assessment workshop can effectively identify existing research capabilities and data, determine and prioritize research and data needs, and address how these efforts can use regional partnerships to aid natural and cultural resource conservation and management at National Parks.

Florida, Mississippi↗

USGS1987

Results of a workshop concerning assessment of the functions of bottomland hardwoods

The U.S. Environmental Protection Agency (EPA) is authorized under Section 404 of the Clean Water Act (33 U.S.C. 1344) to participate in the regulation of the discharge of dredged or fill material into waters of the United States. This regulatory authority is exercised in partnership with the U.S. Army Corps of Engineers, which has responsibility for permit issuance, and in consultation with the U.S. Fish and Wildlife Service and the National Marine Fisheries Service. Through amendments to the original statute, a series of legal actions and court decisions, and the development of operating guidance among the responsible agencies, Section 404 has evolved into the primary mechanism afforded Federal authorities for the protection of wetlands. EPA recognizes the importance of wetlands in achieving the goals of the Clean Water Act, which are to protect and maintain the chemical, physical, and biological integrity of the Nation’s waters. EPA Administrator Lee Thomas has identified wetlands protection as among the highest of Agency priorities. EPA recognizes that bottomland hardwood (BLH) wetlands have vital and unique attributes that, if lost, would severely impact the physical, chemical, and biological integrity of the Nation's waters. As part of a broad program to better protect the Nation's wetlands, EPA has therefore identified bottomland hardwood wetlands as a priority resource requiring special attention on a national basis. Recognizing the importance of implementing an effective, nationally consistent, and scientifically defensible regulatory program, EPA, in October 1984, issued Interim Operating Guidance to its field personnel for implementing the Section 404 regulatory program in bottomland hardwood wetlands. With the goal of improving and finalizing that guidance, EPA is sponsoring a series of workshops designed to answer key questions concerning BLH wetlands, based on the best scientific and technical information currently available. The first two workshops were directed toward summarizing existing scientific and technical knowledge concerning the functions of BLH ecosystems, the characteristics that are important to each function, and the impact of various development activities on those characteristics. The first workshop, which was held in St. Francisville, Louisiana, in December, 1984, examined a wetland zonation concept as a framework for gaining a greater understanding of BLH structure and function. The workshop set out to determine whether characterization of BLH resources as a series of relatively distinct zones, defined by concomitant variation in hydrologic regime, soils, and vegetation, might provide the basis for a useful and scientifically sound regulatory framework. For examp1e, if certain zones are of particular importance to one or more wetland functions that the Clean Water Act was intended to protect, then the zonation concept might be useful from the perspective of how various activities should be regulated. Discussions during the first workshop, however, indicated that the zonation concept provides, at best, only an incomplete picture of the structure and function of BLH ecosystems. In many cases, BLH functions are not limited to or closely correlated with particular zones and, furthermore, many factors other than zone are important determinants of BLH functions. With these responses in mind, the second workshop, held at Lake Lanier, Georgia, in July, 1985, was designed to elicit information on two questions. First, if zones are not an adequate framework for understanding the functions of BLH systems, what characteristics (predictors) can be used to assess the extent to which a particular site performs these functions? And second, what are the impacts of various development activities that often occur in BLH ecosystems on those characteristics and thus on the functions themselves? At the second workshop, individual workgroups dealing with particular subject areas (e.g., hydrology, water quality, fisheries, wildlife, ecosystem processes, and cultural/recreational/economic resources) were able to identify site characteristics that are important determinants of the performance of various functions. For example, the Hydrology Workgroup identified flood storage as one of three major hydrologic functions that BLH ecosystems perform. The workgroup then identified the most important characteristic (e.g., surface area of the site, soil saturation, and others) that determine flood storage and the likely impact of several common activities (e.g., conversion to soybean production and levee construction) on these characteristics. Some of the workgroups also provided estimates of the aggregate impact of activities, acting through all of the characteristics, on certain functions. The workgroups also identified key characteristics that could be used to identify high-value wetlands for various functions. In addition, the workgroups pointed out a number of topics needing further examination and discussion. First, all of the workgroups identified the need to develop the technical basis and information sources to address the problem of cumulative impacts in the regulatory process. Second, most of the workgroups noted the important of contextual variables in assessing the function of a particular site. For example, the location of a BLH site in relationship to other tracts of habitat is an important variable for many wildlife species. Similarly, the extent to which a site retains or transforms contaminants is depended not only on the characteristics of the site, but also on its position in a watershed relative to contaminant inputs. And finally, several of the workgroups pointed out that assessing the impact of an activity on a function is not as simple as "adding up" the impact on individual characteristics, but may depend instead on complex interactions among characteristics. Addressing these questions, as summarized in the objectives and discussions that follow, was the focus of the third workshop, the results of which are described in this report.

Report↗

USGS2003

Simulation of streamflow and water quality in the White Clay Creek subbasin of the Christina River Basin, Pennsylvania and Delaware, 1994-98

The Christina River Basin drains 565 square miles (mi 2 ) in Pennsylvania, Maryland, and Delaware. Water from the basin is used for recreation, drinking water supply, and to support aquatic life. The Christina River Basin includes the major subbasins of Brandywine Creek, White Clay Creek, and Red Clay Creek. The White Clay Creek is the second largest of the subbasins and drains an area of 108 mi 2 . Water quality in some parts of the Christina River Basin is impaired and does not support designated uses of the streams. A multi-agency water-quality management strategy included a modeling component to evaluate the effects of point and nonpoint-source contributions of nutrients and suspended sediment on stream water quality. To assist in non point-source evaluation, four independent models, one for each of the three major subbasins and for the Christina River, were developed and calibrated using the model code Hydrological Simulation Program—Fortran (HSPF). Water-quality data for model calibration were collected in each of the four main subbasins and in smaller subbasins predominantly covered by one land use following a nonpoint-source monitoring plan. Under this plan, stormflow and base- flow samples were collected during 1998 at two sites in the White Clay Creek subbasin and at nine sites in the other subbasins. The HSPF model for the White Clay Creek Basin simulates streamflow, suspended sediment, and the nutrients, nitrogen and phosphorus. In addition, the model simulates water temperature, dissolved oxygen, biochemical oxygen demand, and plankton as secondary objectives needed to support the sediment and nutrient simulations. For the model, the basin was subdivided into 17 reaches draining areas that ranged from 1.37 to 13 mi 2 . Ten different pervious land uses and two impervious land uses were selected for simulation. Land-use areas were determined from 1995 land-use data. The predominant land uses in the White Clay Creek Basin are agricultural, forested, residential, and urban. The hydrologic component of the model was run at an hourly time step and primarily calibrated using streamflow data from two U.S. Geological Survey (USGS) streamflow-measurement stations for the period of October 1, 1994, through October 29, 1998. Additional calibration was done using data from two other USGS streamflow-measurement stations with periods of record shorter than the calibration period. Daily precipitation data from two National Oceanic and Atmospheric Administration (NOAA) gages and hourly precipitation and other meteorological data for one NOAA gage were used for model input. The difference between simulated and observed streamflow volume ranged from -0.9 to 1.8 percent for the 4-year period at the two calibration sites with 4-year records. Annual differences between observed and simulated streamflow generally were greater than the overall error. For example, at a site near the bottom of the basin (drainage area of 89.1 mi 2 ), annual differences between observed and simulated streamflow ranged from -5.8 to 14.4 percent and the overall error for the 4-year period was -0.9 percent. Calibration errors for 36 storm periods at the two calibration sites for total volume, low-flowrecession rate, 50-percent lowest flows, 10-percent highest flows, and storm peaks were within the recommended criteria of 20 percent or less. Much of the error in simulating storm events on an hourly time step can be attributed to uncertainty in the hourly rainfall data. The water-quality component of the model was calibrated using data collected by the USGS and state agencies at three USGS streamflow-measurement stations with variable water-quality monitoring periods ending October 1998. Because of availability, monitoring data for suspended-solids concentrations were used as surrogates for suspended-sediment concentrations, although suspended solids may underestimate suspended sediment and affect apparent accuracy of the suspended-sediment simulation. Comparison of observed to simulated loads for up to ﬁve storms in 1998 at each of the two nonpoint-source monitoring sites in the White Clay Creek Basin indicate that simulation error is commonly as large as an order of magnitude for suspended sediment and nutrients. The simulation error tends to be smaller for dissolved nutrients than for particulate nutrients. Errors of 40 percent or less for monthly or annual values indicate a fair to good water-quality calibration according to recommended criteria, with much larger errors possible for individual events. The accuracy of the water-quality calibration under stormﬂow conditions is limited by the relatively small amount of water-quality data available for the White Clay Creek Basin. Users of the White Clay Creek HSPF model should be aware of model limitations and consider the following if the model is used for predictive purposes: streamﬂow and water quality for individual storm events may not be well simulated, but the model performance is reasonable when evaluated over longer periods of time; the observed ﬂow-duration curve for the simulation period is similar to the long-term ﬂow-duration curve at White Clay Creek near Newark, Del., indicating that the calibration period is representative of all but highest 0.1 percent and lowest 0.1 percent of ﬂows at that site; relative errors in streamﬂow and water-quality simulations are greater for smaller drainage areas than for larger areas; and calibration for water-quality was based on sparse data.

Water-Resources Investigations Report↗

USGS2026

Vessel surveys for marine birds in the Gulf of America (Gulf of Mexico): Protocol manual (2017–2025)

This manual provides contextual background and detailed instructions for survey procedures that were used to collect, enter, archive, and analyze digitally-entered field data collected for marine birds during three large-vessel survey projects in the northern Gulf of America (also Gulf of Mexico, hereafter “Gulf”). Projects using this protocol included the Gulf of Mexico Marine Assessment Program for Protected Species (GoMMAPPS: 2017-2018), the Vessel Surveys for Abundance and Distribution of Marine Mammals and Seabirds (VSAD: 2023-2024), and certain repositioning legs of the Atlantic Marine Assessment Program for Protected Species (AMAPPS: 2021, 2023). Based substantially on Ballance and Force (2011), the protocol used in the Gulf is based on a standardized 300 m wide strip transect using software architecture available in program SeeBird (v.4.3.7), a data collection program developed by Robert Holland at the National Oceanic and Atmospheric Administration (NOAA) Southwest Fisheries Science Center, La Jolla, CA. Survey protocols relied on the digital entering of standardized metadata linked to sightings of seabirds (e.g., species, number, location, distance bin, association[s], behavior, flight direction, flight height, angle from ship, age, sex, plumage, and optional comments) as well as other protected species. SeeBird has additional modules that may be used to input data on mixed-species seabird flocks and flying fish (only the latter was used in the Gulf). SeeBird includes “user-driven” commands issued through the keyboard, touch screen, and/or mouse, many of which are aided by drop-down menus that prompt the user options that are available for input. In addition, the program features “event–driven” inputs updated at intervals selected by the user, and that also record exact time and location of such edits. We describe how SeeBird was adapted in the Gulf both to run directly via serial connections from the ship’s navigation system and to operate independently from the ship through a satellite-derived GPS feed. This user manual also gives information about: procedures used to document flying fish abundance on Gulf surveys; how to use the Beaufort scale for standardizing wind force and sea state environmental conditions; how to make and use a hand-held rangefinder for delimiting strip transect bin distances; additional functionalities in SeeBird for which user guides are not available; file-naming, file-archiving, and file location conventions used on Gulf marine bird surveys; protocols used in the Gulf for describing relative abundance of the macro-alga Sargassum as an environmental covariate; the standardized four-letter taxa codes (summarized in a SpeciesCode.txt file) used in the Gulf for denoting species, other taxonomic, and event categories as inputs to SeeBird; an Excel example spreadsheet that has successfully imported SeeBird’s ASCII text file; procedural steps to import, edit, and archive into Excel ASCII text files from SeeBird; initialization instructions for starting up program SeeBird on a Panasonic ToughBook™ that relies on integrated, satellite-derived GPS, and for writing “S” (seabirds + other taxa) and “E” (flying fish) ASCII files to a folder or subfolder other than the default root location on the laptop that contains program SeeBird; how to trouble-shoot miscellaneous start-up problems with program SeeBird; how to add new four-letter codes (into a SpeciesCode.txt file) when additional taxa or objects of interest are encountered. The primary objective of this manual is to archive a permanent, replicable history of survey methodology to facilitate continuity with comparable future projects that may be conducted in the Gulf. A secondary objective is to describe why and how program SeeBird was applied and adapted specifically for operating in Gulf survey conditions. As of late 2025, user guides for software program SeeBird were no longer readily accessible, so this manual serves also to address that gap.

Northern Gulf of America↗

USGS2003

Simulation of streamflow and water quality in the Red Clay Creek subbasin of the Christina River Basin, Pennsylvania and Delaware, 1994-98

The Christina River Basin drains 565 square miles (mi 2 ) in Pennsylvania and Delaware and includes the major subbasins of Red Clay Creek, White Clay Creek, Brandywine Creek, and Christina River. The Red Clay Creek is the smallest of the subbasins and drains an area of 54 mi 2 . Streams in the Christina River Basin are used for recreation, drinking-water supply, and to support aquatic life. Water quality in some parts of the Christina River Basin is impaired and does not support designated uses of the stream. A multi-agency, waterquality management strategy included a modeling component to evaluate the effects of point and nonpointsource contributions of nutrients and suspended sediment on stream water quality. To assist in nonpointsource evaluation, four independent models, one for each of the four main subbasins of the Christina River Basin, were developed and calibrated using the model code Hydrological Simulation Program?Fortran (HSPF). Water-quality data for model calibration were collected in each of the four main subbasins and in smaller subbasins predominantly covered by one land use following a nonpoint-source monitoring plan. Under this plan, stormflow and base-flow samples were collected during 1998 at 1 site in the Red Clay Creek subbasin and at 10 sites elsewhere in the Christina River Basin. The HSPF model for the Red Clay Creek subbasin simulates streamflow, suspended sediment, and the nutrients, nitrogen and phosphorus. In addition, the model simulates water temperature, dissolved oxygen, biochemical oxygen demand, and plankton as secondary objectives needed to support the sediment and nutrient simulations. For the model, the basin was subdivided into nine reaches draining areas that ranged from 1.7 to 10 mi 2 . One of the reaches contains a regulated reservoir. Ten different pervious land uses and two impervious land uses were selected for simulation. Land-use areas were determined from 1995 land-use data. The predominant land uses in the Red Clay Creek subbasin are agricultural, forested, residential, and urban. The hydrologic component of the model was run at an hourly time step and calibrated using streamflow data from three U.S. Geological Survey (USGS) streamflow-measurement stations for the period of October 1, 1994, through October 29, 1998. Daily precipitation data from one National Oceanic and Atmospheric Administration (NOAA) gage and hourly data from one NOAA gage were used for model input. The difference between observed and simulated stream- flow volume ranged from -0.8 to 2.1 percent for the 4-year period at the three calibration sites. Annual differences between observed and simulated streamflow generally were greater than the overall error for the 4-year period. For example, at a site near Stanton, Del., near the bottom of the basin (drainage area of 50.2 mi 2 ), annual differences between observed and simulated streamflow ranged from -5.8 to 6.0 percent and the overall error for the 4-year period was -0.8 percent. Calibration errors for 36 storm periods at the three calibration sites for total volume, low-flow-recession rate, 50-percent lowest flows, 10-percent highest flows, and storm peaks were 20 percent or less. Much of the error in simulating storm events on an hourly time step can be attributed to uncertainty in the rainfall data. The water-quality component of the model was calibrated using nonpoint-source monitoring data collected in 1998 at one USGS streamflowmeasurement station and other water-quality monitoring data collected at three USGS streamflowmeasurement stations. The period of record for waterquality monitoring was variable at the stations, with an end date of October 1998 but the start date ranging from October 1994 to January 1998. Because of availability, monitoring data for suspended-solids concentrations were used as surrogates for suspendedsediment concentrations, although suspended solids may underestimate suspended sediment and affect apparent accuracy of the suspended-sediment simulation. Comparison of observed to simulated loads for ﬁve storms in 1998 at the one nonpoint-source monitoring site at Wooddale, Del., indicates that simulation error commonly is as large as an order of magnitude for suspended sediment and nutrients. The simulation error tends to be smaller for dissolved utrients than particulate nutrients. Errors of 40 percent or less for monthly or annual values indicate a fair to good water-quality calibration according to recommended criteria, with much larger errors possible for individual storm events. Assessment of the accuracy of the water-quality calibration under stormﬂow conditions is limited by the sparsity of available water-quality data in the basin. Users of the Red Clay Creek HSPF model should be aware of model limitations and consider the following when predictive scenarios are desired: streamﬂow-duration curves indicate the model simulates stream-ﬂow reasonably well when evaluated over a broad range of conditions and time, although streamﬂow and the corresponding water quality for individual storm events may not be well simulated; streamﬂow-duration curves for the simulation period compare well with duration curves for the 57.5-year period ending in 2001 at Wooddale, Del., and include all but the extreme high-ﬂow and low-ﬂow events; calibration for water quality was based on sparse data, with the result of increasing uncertainty in the water-quality simulation.

Water-Resources Investigations Report↗

USGS2007

Hydrologic, Water-Quality, and Meteorological Data for the Cambridge, Massachusetts, Drinking-Water Source Area, Water Year 2005

Records of water quantity, water quality, and meteorological parameters were continuously collected from three reservoirs, two primary streams, and four subbasin tributaries in the Cambridge, Massachusetts, drinking-water source area during water year 2005 (October 2004 through September 2005). Water samples were collected during base-flow conditions and storms in the subbasins of the Cambridge Reservoir and Stony Brook Reservoir drainage areas and analyzed for selected elements, organic constituents, suspended sediment, and Escherichia coli bacteria. These data were collected to assist watershed administrators in managing the drinking-water source area and to identify potential sources of contaminants and trends in contaminant loading to the water supply. Monthly reservoir capacities for the Cambridge Reservoir varied from about 59 to 98 percent during water year 2005, while monthly reservoir capacities for the Stony Brook Reservoir and the Fresh Pond Reservoir were maintained at capacities greater than 84 and 96 percent, respectively. Assuming a water demand of 15 million gallons per day by the city of Cambridge, the volume of water released from the Stony Brook Reservoir to the Charles River during the 2005 water year is equivalent to an annual water surplus of about 119 percent. Recorded precipitation in the source area for the 2005 water year was within 2 inches of the total annual precipitation for the previous 2 water years. The monthly mean specific conductances for the outflow of the Cambridge Reservoir were similar to historical monthly mean values. However, monthly mean specific conductances for Stony Brook near Route 20, in Waltham (U.S. Geological Survey station 01104460), which is the principal tributary feeding the Stony Brook Reservoir, were generally higher than the medians of the monthly mean specific conductances for the period of record. Similarly, monthly mean specific conductances for a small tributary to Stony Brook (U.S. Geological Survey station 01104455) were generally higher than the medians of the monthly mean specific conductances for the period of record. The annual mean specific conductance for Fresh Pond Reservoir increased from 514 microsiemens per centimeter (?S/cm) in the 2004 water year to 553 ?S/cm for the 2005 water year. Water samples were collected from four tributaries during base-flow and stormflow conditions in December 2004, and July, August, and September 2005 and analyzed for suspended sediment, 6 major dissolved ions, total nitrogen, total phosphorus, 8 total metals, 18 polyaromatic hydrocarbons (PAHs), 61 pesticides and metabolites, and Escherichia coli bacteria. Concentrations for most dissolved constituents in samples of stormwater were generally lower than the concentrations observed in samples collected during base flow; however, concentrations of total phosphorus, PAHs, suspended sediment, and some total recoverable metals were substantially greater in stormwater samples. Concentrations of dissolved chloride and total recoverable manganese in water samples collected during base-flow conditions from three tributaries exceeded the U.S. Environmental Protection Agency (USEPA) secondary drinking water standards of 250 and 0.05 milligrams per liter (mg/L), respectively. Concentrations of total recoverable manganese exceeded the secondary drinking water standard in samples of stormwater from each tributary. Concentrations of total recoverable iron in water samples exceeded the (USEPA) secondary drinking water standard of 0.3 mg/L periodically in water samples collected at (USEPA) stations 01104415, 01104455, and 01104475, and consistently in all water samples collected at USGS station 01104433. Concentrations of Escherichia coli bacteria in water samples collected during base flow ranged from 4 to 1,400 colony-forming units per 100 milliliters (col/100mL). Concentrations of Escherichia coli bacteria in composite samples of stormwater ranged between 1,700 to 43,000 c

Open-File Report↗

USGS2008

EAARL coastal topography - Northern Gulf of Mexico

These remotely sensed, geographically referenced elevation measurements of Lidar-derived coastal topography were produced as a collaborative effort between the U.S. Geological Survey (USGS), Florida Integrated Science Center (FISC), St. Petersburg, FL and the National Aeronautics and Space Administration (NASA), Wallops Flight Facility, VA. One objective of this research is to create techniques to survey areas for the purposes of geomorphic change studies following major storm events. The USGS Coastal and Marine Geology Program's National Assessment of Coastal Change Hazards project is a multi-year undertaking to identify and quantify the vulnerability of U.S. shorelines to coastal change hazards such as effects of severe storms, sea-level rise, and shoreline erosion and retreat. Airborne Lidar surveys conducted during periods of calm weather are compared to surveys collected following extreme storms in order to quantify the resulting coastal change. Other applications of high-resolution topography include habitat mapping, ecological monitoring, volumetric change detection, and event assessment. The purpose of this project is to provide highly detailed and accurate datasets of the northern Gulf of Mexico coastal areas, acquired on September 19, 2004, immediately following Hurricane Ivan. The datasets are made available for use as a management tool to research scientists and natural resource managers. An innovative airborne Lidar instrument originally developed at the NASA Wallops Flight Facility, and known as the Experimental Airborne Advanced Research Lidar (EAARL), was used during data acquisition. The EAARL system is a raster-scanning, waveform-resolving, green-wavelength (532 nanometer) Lidar designed to map near-shore bathymetry, topography, and vegetation structure simultaneously. The EAARL sensor suite includes the raster-scanning, water-penetrating full-waveform adaptive Lidar, a down-looking RGB (red-green-blue) digital camera, a high-resolution multi-spectral color infrared (CIR) camera, two precision dual-frequency kinematic carrier-phase GPS receivers and an integrated miniature digital inertial measurement unit which provide for sub-meter georeferencing of each laser sample. The nominal EAARL platform is a twin-engine Cessna 310 aircraft, but the instrument may be deployed on a range of light aircraft. A single pilot, a Lidar operator, and a data analyst constitute the crew for most survey operations. This sensor has the potential to make significant contributions in measuring sub-aerial and submarine coastal topography within cross-environmental surveys. Elevation measurements were collected over the survey area using the EAARL system on September 19, 2004. The survey resulted in the acquisition of 3.2 gigabytes of data. The data were processed using the Airborne Lidar Processing System (ALPS), a custom-built processing system developed in a NASA-USGS collaboration. ALPS supports the exploration and processing of Lidar data in an interactive or batch mode. Modules for pre-survey flight line definition, flight path plotting, Lidar raster and waveform investigation, and digital camera image playback have been developed. Processing algorithms have been developed to extract the range to the first and last significant return within each waveform. ALPS is routinely used to create maps that represent submerged or sub-aerial topography. Specialized filtering algorithms have been implemented to determine the 'bare earth' under vegetation from a point cloud of 'last return' elevations.

Alabama, Florida, Mississippi↗

USGS2014

Guidelines for use of fishes in research

The 2004 and 2014 Guidelines were developed to provide a structure that advances appropriate attention toward valid experimental designs and procedures with aquatic animals while ensuring humane treatment of the experimental subjects. At a practical level, the Guidelines are intended to provide general recommendations on field and laboratory endeavors, such as sampling, holding, and handling fishes; to offer information on administrative matters, including regulations and permits; and to address typical ethical concerns, such as perceptions of pain or discomfort experienced by experimental subjects. These Guidelines must be recognized as guidelines . They are not intended to provide detailed instructions but rather to alert investigators to a broad array of topics and concerns to consider prior to initiating study. At a comprehensive level, the principles upon which these Guidelines are based are broadly applicable, and many of the described practices and approaches can be adapted to situations involving other aquatic animal species and conditions. Understanding the differences between fishes and other vertebrates, especially mammals, is critically important to conducting scientifically sound research with fishes. Disparities in life histories and mortality rates in fishes versus other vertebrates are critical in designing sustainable sampling levels in fish populations. The UFR Committee points out that (1) compared to mammalian populations, adult populations of many fish species persist despite very high natural mortality rates in juvenile stages by virtue of the fact that most species lay thousands or tens of thousands of eggs; (2) because of these mortality patterns, research on fishes, especially field research or research on early life stages, can involve, and often requires, much larger numbers of research subjects than does research on mammals; and (3) the animal handling and husbandry requirements for fishes are fundamentally different from those for mammals and other vertebrates, in general. Policies, regulations, and recommendations developed for research on mammals, birds, reptiles, or even amphibians are frequently inappropriate for research with fishes. The Guidelines also address some of the ethical concerns that motivate guidelines used for research with other vertebrates, while being mindful of the unique physiology and general nature of fishes. The Guidelines were developed for general use by investigators within the United States; therefore, the roles, responsibilities, and informational needs of Institutional Animal Care and Use Committees (IACUCs) were given specific attention. All United States institutions that use vertebrate animals for research, teaching, research training, and biological testing are required to create an IACUC to oversee and evaluate all aspects of the institution’s animal care and use program. Investigators from other nations who read this document may disregard specific references to U.S. state and federal laws and regulations, as their institutional infrastructure and processes may differ from those of an internal committee such as IACUCs. The principles described herein, however, are applicable to research on fishes regardless of geographic location. Investigators in other nations may benefit by modifying any of the specific provisions pertaining to the United States, thereby adopting guidelines consistent with the laws and regulations of their own government. The UFR Committee urges that the Guidelines be endorsed and adopted (adapted, where necessary) by those state and federal authorities with regulatory responsibilities for fishes, offices with federal oversight (e.g., National Institutes of Health, Office of Laboratory Animal Welfare; http://grants.nih.gov/grants/olaw/olaw.htm ) as well as by universities and other institutions and authorities using fishes and aquatic animals within their research and teaching programs.

Report↗