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At least 1,009 records · Page 56Linked to original sources
USGS1988

Garnet compositions and their use as indicators of peraluminous granitoid petrogenesis - southeastern Arabian Shield

Garnet, an uncommon accessory mineral in igneous rocks, occurs in seven small peraluminous granitoid plutons in the southeastern Arabian Shield; textural equilibrium between garnet and other host granitoid minerals indicates that the garnets crystallized from their host magmas. Compositions of the garnets form three groups that reflect host-granitoid compositions, which in turn reflect source compositions and tectonic regimes in which the host magmas were generated. Garnets from the seven plutons have almandine-rich cores and spessartine-rich rims. This reverse zoning depicts host magma compositional evolution; i.e. rimward spessartine enrichment resulted from progressive, host-magma manganese enrichment. The garnets are heavy rare-earth element enriched; (Lu/La)N ranges from 13 to 355 and one of the garnets contains spectacularly elevated abundances of Y, Ta, Th, U, Zn, Zr, Hf, Sn, and Nb. Involvement of garnets with these trace element characteristics in magma genesis or evolution can have dramatic effects on trace element signatures of the resulting magmas. Other researchers suggest that Mn-enriched magmas are most conducive to garnet nucleation. Although the garnetiferous granitoids discussed here are slightly Mn enriched, other genetically similar peraluminous Arabian granitoids lack garnet; Mn enrichment alone does not guarantee garnet nucleation. The presence of excess alumina in the magma may be a prerequisite for garnet nucleation. ?? 1988 Springer-Verlag.

Contributions to Mineralogy and Petrology↗
USGS2024

Design, development, and implementation of IsoBank: A centralized repository for isotopic data

Stable isotope data have made pivotal contributions to nearly every discipline of the physical and natural sciences. As the generation and application of stable isotope data continues to grow exponentially, so does the need for a unifying data repository to improve accessibility and promote collaborative engagement. This paper provides an overview of the design, development, and implementation of IsoBank , a community-driven initiative to create an open-access repository for stable isotope data implemented online in 2021. A central goal of IsoBank is to provide a web-accessible database supporting interdisciplinary stable isotope research and educational opportunities. To achieve this goal, we convened a multi-disciplinary group of over 40 analytical experts, stable isotope researchers, database managers, and web developers to collaboratively design the database. This paper outlines the main features of IsoBank and provides a focused description of the core metadata structure. We present plans for future database and tool development and engagement across the scientific community. These efforts will help facilitate interdisciplinary collaboration among the many users of stable isotopic data while also offering useful data resources and standardization of metadata reporting across eco-geoinformatics landscapes.

PLoS ONE↗
USGS2003

An introduction to the San Francisco Estuary tidal wetlands restoration series

Restoration of tidal wetlands may provide an important tool for improving ecological health and water management for beneficial uses of the San Francisco Estuary (hereafter “Estuary”). Given the large losses of tidal wetlands from San Francisco Bay and the Sacramento-San Joaquin Delta in the last 150 years, it seems logical to assume that restoring tidal wetlands will have benefits for a variety of aquatic and terrestrial native species that have declined during the same time period. However, many other changes have also occurred in the Estuary concurrent with the declines of native species. Other factors that might be important in species declines include the effects of construction of upstream dams, large and small water diversions within the Sacramento-San Joaquin Delta, agricultural pesticides, trace elements from industrial and agricultural activities, and invasions of alien species. Discussions among researchers, managers, and stakeholders have identified a number of uncertainties regarding the potential benefits of tidal wetland restoration. The articles of the Tidal Wetlands Restoration Series address four major issues of concern. Stated as questions, these are: 1. Will tidal wetland restoration enhance populations of native fishes? 2. Will wetland restoration increase rates of methylation of mercury? 3. Will primary production and other ecological processes in restored tidal wetlands result in net export of organic carbon to adjacent habitats, resulting in enhancement of the food web? Will the carbon produced contribute to the formation of disinfection byproducts when disinfected for use as drinking water? 4. Will restored tidal wetlands provide long-term ecosystem benefits that can be sustained in response to ongoing physical processes, including sedimentation and hydrodynamics? Reducing the uncertainty surrounding these issues is of critical importance because tidal wetland restoration is assumed to be a critical tool for enhancement of native species and ecosystem processes in the Estuary.

California↗
USGS2024

Automated, near real-time ground-motion processing at the U.S. Geological Survey

We describe automated ground‐motion processing software named gmprocess that has been developed at the U.S. Geological Survey (USGS) in support of near‐real‐time earthquake hazard products. Because of the open‐source development process, this software has benefitted from the involvement and contributions of a broad community and has been used for a wider range of applications than was initially envisioned. Here, we give an overview and introduction to the software, including how it has leveraged other open‐source libraries. We highlight some key features that gmprocess provides, compare response spectra calculated with the automated processing approach of gmprocess to the response spectra provided by the Next Generation Attenuation projects, and summarize projects that have utilized gmprocess. These use‐cases demonstrate that this software development effort has been successfully leveraged in earthquake research activities both within and outside the USGS.

Seismological Research Letters↗
USGS2023

Saproxylic beetles' morphological traits and higher trophic guilds indicate boreal forest naturalness

Forests contribute to numerous ecosystem functions and services and contain a large proportion of terrestrial biodiversity, but they are being negatively impaced by anthropogenic activities. Forests that have never been clear-cut and have old growth characteristics, termed “near-natural,” often harbor different and richer species assemblages than managed forests. Alternative management strategies may be able to balance the needs of biodiversity with the demands of forestry, but evaluation efforts are limited by the challenges of measuring biodiversity. Species richness is frequently used as a simple measure of biodiversity, but research indicates that it may not adequately capture community-level changes. Alternatively, trait-based measures of biodiversity may prove to be useful, but research is lacking. In this paper, we use a large dataset that includes 339 obligate saproxylic beetle species collected over a decade in the boreal region throughout southern Norway to: (1) establish if there is a difference in beetle community composition between near-natural and managed forests; and (2) determine which measures of beetle biodiversity best indicate forest naturalness. We arranged the sites in an ordination space and tested for differences in community composition between these forest types. We also tested different measures of biodiversity to determine which were the most predictive of forest naturalness. We found a clear difference in community composition between near-natural and managed forests. Additionally, three measures of biodiversity were most predictive of forest naturalness: proportional abundance of predators, community weighted mean (CWM) of wing length, and CWM of body roundness. The probability that a forest was near-natural increased with the proportional abundance of predators but decreased with CWM wing length and body roundness. Although species richness was higher in near-natural forests, the effect was not significant. Overall, our findings underscore the conservation value of near-natural forests and highlight the potential of several measures of biodiversity for determining forest quality.

Ecology and Evolution↗
USGS2025

Virulence evolution of a salmonid virus following a host jump

Emergent viral diseases remain a critical obstacle to welfare across landscapes and species, encompassing humans, wildlife, and agriculture. Following a jump to a novel host, the severity of disease resulting from infection is a critical determinant of the overall emergent pathogen threat. Conventional wisdom posits that virulence, defined here as host mortality, attenuates to intermediate levels as a pathogen adapts to a novel host, but this is largely based on data from just one system, myxoma virus, which was intentionally introduced as a biocontrol agent in rabbits ( Oryctolagus cuniculus ) in mid-1900s Australia. In this study, we demonstrate that infectious hematopoietic necrosis virus (IHNV), which made a host jump from sockeye salmon ( Oncorhynchus nerka , ancestral host) to rainbow trout ( O. mykiss , novel host), has not conformed to classical theory. We quantified virulence in the ancestral and novel hosts using common garden in vivo experiments with 16 archival IHNV isolates collected from 1972-2017, which span the period from shortly after the host jump and the subsequent 45 years of host adaptation. These virus isolates also represent two distinct phylogenetic genogroups, each associated with either the ancestral or novel host. The experiments were replicated across two research facilities, two challenges dosages, and two temperatures. While isolates from the ancestral genogroup showed no temporal change in virulence in either host, isolates from the novel viral genogroup displayed a significant increase in virulence over time in the novel host. Some possible indication of a virus temperature adaption after the host jump was also present. Potential drivers of virulence evolution are discussed. This represents one of only a handful of systems in which the evolution of increased virulence has been empirically characterized after a host jump and subsequent adaptation. It contributes to a growing body of evidence that contradicts the classical case study of myxoma virus attenuation after adaptation.

PLoS Pathogens↗
USGS1986

Potential impacts of agricultural chemicals on waterfowl and other wildlife inhabiting prairie wetlands: An evaluation of research needs and approaches

The potential for agricultural chemicals to enter prairie-pothole wetlands and impact wildlife dependent on these wetlands for survival and reproduction appears to be great. However, the actual risk to wetland wildlife from the inputs of these chemicals cannot be adequately assessed at this time, because of insufficient data. Available data on the use of pesticides in the prairie-pothole region and the toxicity of these pesticides suggest that insecticides pose the greatest hazard to wetland wildlife, particularly birds. The majority of the most widely used insecticides within the region are very toxic to aquatic invertebrates and birds. Of particular concern are the impacts of agricultural chemicals on the quality of the remaining wetlands in the region and whether or not these impacts have contributed to observed declines in waterfowl populations. Although existing data suggest that adult and juvenile waterfowl may not be more sensitive to these chemicals than are other wetland wildlife, their food habits and feeding behaviors may make them more vulnerable to direct toxic effects or chemical-induced changes in the abundance of aquatic invertebrates. Laboratory and field studies in the United States and Canada are critically needed to assess these potential impacts.

Transactions of the North American Wildlife and Na↗
USGS1984

Thermal modeling of Halley's comet

The comet thermal model of Weissman and Kieffer is used to calculate gas production rates and other parameters for the 1986 perihelion passage of Halley's Comet. Gas production estimates are very close to revised pre-perihelion estimates by Newburn based on 1910 observations of Halley; the increase in observed gas production post-perihelion may be explained by a variety of factors. The energy contribution from multiply scattered sunlight and thermal emission by coma dust increases the total energy reaching the Halley nucleus at perihelion by a factor of 2.4. The high obliquity of the Halley nucleus found by Sekanina and Larson may help to explain the asymmetry in Halley's gas production rates around perihelion. ?? 1984.

Advances in Space Research↗
USGS2009

Volcanic history, geologic analysis and map of the Prometheus Patera region on Io

Data from Jupiter's moon Io returned by the Galileo spacecraft have been used to create a geologic map of Prometheus Patera, its associated flow field, and nearby features. We have identified the location of the vent that fed the Prometheus flow field during the Galileo epoch in the north-eastern portion of the main Prometheus flow field. This vent is the probable source of a small sulphur-rich plume. Previous studies suggested that the vent may be atop a tectonic fault but we find that the vent is offset from the putative fault. It is plausible that, in the past, magma exploited the fault to reach the surface at Prometheus Patera, but subsequent magma cooling in the conduit could have caused an obstruction preventing further eruptions from providing significant contributions to the Prometheus flow field. We also speculate on how a new Prometheus plumbing system may be fed by mafic magmas after melt stalls in magma reservoirs during its ascent through the lithosphere from the mantle.

Journal of Volcanology and Geothermal Research↗
USGS2024

Temporal variability in irrigated land and climate influences on salinity loading across the Upper Colorado River Basin, 1986-2017

Freshwater salinization is a growing global concern impacting human and ecosystem needs with impacts to water availability for human and ecological uses. In the Upper Colorado River Basin (UCRB), dissolved solids in streams compound ongoing water supply challenges to further limit water availability and cause economic damages. Much effort has been dedicated to understanding dissolved solid sources, transport, and management in the region, yet temporal variability in loading from key sources such as irrigated lands and the influence of climate on dissolved solids loading remains unknown. Quantifying the contributions and temporal variability of dissolved solids loads from irrigated lands may benefit salinity management efforts. This study applies a time-varying (dynamic) modeling approach to predict annual dissolved solids loads across the UCRB from 1986 through 2017. Between 66% and 82% of the total accumulated dissolved solids load in the basin is from groundwater (storage and baseflow). Our findings link climate, irrigation, and groundwater, and confirm large storage contributions that have declined slightly with time. Dissolved solids loads increase during wet periods and decrease during dry periods, although the relative contributions of different sources vary little with time. Irrigation enhances loading efficiency relative to unirrigated areas through runoff and groundwater, and can locally be a major source of dissolved solids where irrigation occurs. Results indicate that loads from irrigated areas increase when irrigated area and/or water available for runoff increase. Increased regional aridification over the study period may have contributed to decreasing stream salinity through both quicker surface runoff and lagged groundwater storage processes. Study results may be relevant to salinity management in arid environments where water availability is limited and where irrigation influences salinity loading to streams.

Upper Colorado River Basin↗
USGS2015

Book review: Restoring paradise: Rethinking and rebuilding nature in Hawaii

The native ecosystems of Hawai‘i have been severely degraded by the introduction of herbivorous mammals and a myriad of invasive plant species. Left unmanaged, most natural areas would continue along a trajectory towards domination by nonnative species; however, several projects have undertaken the daunting task of ecological restoration, four of which are the subject of Restoring Paradise by Robert Cabin: Hakalau Forest National Wildlife Refuge; Hawai‘i Volcanoes National Park; the Auwahi dryland forest, Maui and Limahuli Garden and Preserve, Kaua‘i. After an introductory section discussing the setting and factors that have contributed to so much of the degradation and extinction of Hawai‘i’s native biota, Cabin outlines two different views of restoration in two central sections of the book: ad hoc, trial-and-error approaches versus the careful application of science to direct restoration. The time-tested methods of fence construction, ungulate removal, weed control, and replanting native species with the help of numerous volunteers and community support are presented in marked contrast to inconsistent applications of science in guiding restoration, and illustrated by some of the author’s unsuccessful research. The book is largely presented as a non-technical first-person account of travels and meetings with key personalities driving restoration projects. The philosophies of restoration practitioners are embedded in passages from interviews. Setbacks, obstacles, logistical constraints, and successes are narrated in between as Cabin revisits each of the restoration sites. The utility of science in restoration is frequently questioned by the author and sometimes abandoned by practitioners in favour of a ‘let-nature-take-its-course’ approach. Review info: Restoring Paradise: Rethinking and Rebuilding Nature in Hawaii . By Robert J. Cabin, 2013. ISBN: 978-0822836931, 236 pp.

Pacific Conservation Biology↗
USGS2018

The potential for citizen science to produce reliable and useful information in ecology

We examined features of citizen science that influence data quality, inferential power, and usefulness in ecology. As background context for our examination, we considered topics such as ecological sampling (probability based, purposive, opportunistic), linkage between sampling technique and statistical inference(designbased,modelbased),andscientificparadigms(confirmatory,exploratory).Wedistinguished several types of citizen science investigations, from intensive research with rigorous protocols targeting clearly articulated questions to mass-participation internet-based projects with opportunistic data collection lacking samplingdesign,andexaminedoverarchingobjectives,design,analysis,volunteertraining,andperformance. We identified key features that influence data quality: project objectives, design and analysis, and volunteer training and performance. Projects with good designs, trained volunteers, and professional oversight can meet statistical criteria to produce high-quality data with strong inferential power and therefore are well suited for ecological research objectives. Projects with opportunistic data collection, little or no sampling design, and minimal volunteer training are better suited for general objectives related to public education or data exploration because reliable statistical estimation can be difficult or impossible. In some cases, statistically robust analytical methods, external data, or both may increase the inferential power of certain opportunistically collected data. Ecological management, especially by government agencies, frequently requires data suitable for reliable inference. With standardized protocols, state-of-the-art analytical methods, and well-supervised programs, citizen science can make valuable contributions to conservation by increasing the scope of species monitoring efforts. Data quality can be improved by adhering to basic principles of data collection and analysis, designing studies to provide the data quality required, and including suitable statistical expertise, thereby strengthening the science aspect of citizen science and enhancing acceptance by the scientific community and decision makers.

Conservation Biology↗
USGS1983

Land resource information needs of county government : a case study in Larimer County, Colorado

My two colleagues on the study team, Rex Burns of the Larimer County Planning Department, and Glenn McCarty of the Fort Collins office of the Soil Conservation Service, contributed substantially to this report; many of their written words have found their way directly into the text. Jill O'Gara later replaced Rex Burns as the Larimer County coordinator in the study's final stages. John Rold, Colorado State Geologist, assisted in coordinating our efforts at the beginning of this study. Lou Campbell, State Cartographer, gave valuable advice and assistance throughout the effort. Wallace Hansen and James Blakey of the USGS Geologic and Water Resources Divisions, respectively, read the final manuscript and helped in many other ways. Joanna Trolinger served as research assistant and manuscript typist. Many others in the USGS, SCS, and other organizations helped in supplying information and advice. Tom Bates, then Chairman of the USGS Central Region Earth Science Applications Task Force, was the originator of the study, leader of the USGS participation effort, and guiding inspiration throughout. The study was carried out in association with the Program on Environment and Behavior, Institute of Behavioral Science, University of Colorado, Boulder.

Open-File Report↗
USGS2016

Finite-element modelling of physics-based hillslope hydrology, Keith Beven, and beyond

Keith Beven is a voice of reason on the intelligent use of models and the subsequent acknowledgement/assessment of the uncertainties associated with environmental simula-tion. With several books and hundreds of papers, Keith’s work is widespread, well known, and highly referenced. Four of Keith’s most notable contributions are the iconic TOPMODEL (Beven and Kirkby, 1979), classic papers on macropores and preferential flow (Beven and Germann, 1982, 2013), two editions of the rainfall-runoff modelling bible (Beven, 2000a, 2012), and the selection/commentary for the first volume from the Benchmark Papers in Hydrology series (Beven, 2006b). Remarkably, the thirty-one papers in his benchmark volume, entitled Streamflow Generation Processes, are not tales of modelling wizardry but describe measurements designed to better understand the dynamics of near-surface systems (quintessential Keith). The impetus for this commentary is Keith’sPhD research (Beven, 1975), where he developed a new finite-element model and conducted concept-development simu-lations based upon the processes identified by, for example, Richards (1931), Horton (1933), Hubbert (1940), Hewlett and Hibbert (1963), and Dunne and Black (1970a,b). Readers not familiar with the different mechanisms of streamflow generation are referred to Dunne (1978).

Hydrological Processes↗
USGS2012

Spatial and temporal patterns of surface water quality and ichthyotoxicity in urban and rural river basins in Texas

The Double Mountain Fork Brazos River (Texas, USA) consists of North (NF) and South Forks (SF). The NF receives urban runoff and twice-reclaimed wastewater effluent, whereas the SF flows through primarily rural areas. The objective of this study was to determine and compare associations between standard water quality variables and ichthyotoxicity at a landscape scale that included urban (NF) and rural (SF) sites. Five NF and three SF sites were sampled quarterly from March 2008 to March 2009 for specific conductance, salinity, hardness, pH, temperature, and turbidity; and a zebrafish ( Danio rerio ) embryo bioassay was used to determine ichthyotoxicity. Metal and nutrient concentrations at all sites were also measured in addition to standard water quality variables in spring 2009. Principal component analyses identified hardness, specific conductance, and salinity as the water variables that best differentiate the urban NF (higher levels) from rural SF habitat. Nutrient levels were also higher in the NF, but no landscape scale patterns in metal concentrations were observed. Ichthyotoxicity was generally higher in NF water especially in winter, and multiple regression analyses suggested a positive association between water hardness and ichthyotoxicity. To test for the potential influence of the toxic golden alga ( Prymnesium parvum ) on overall ichthyotoxicity, a cofactor known to enhance golden alga toxin activity was used in the bioassays. Golden alga ichthyotoxicity was detected in the NF but not the SF, suggesting golden alga may have contributed to overall ichthyotoxicity in the urban but not in the rural system. In conclusion, the physicochemistry of the urban-influenced NF water was conducive to the expression of ichthyotoxicity and also point to water hardness as a novel factor influencing golden alga ichthyotoxicity in surface waters.

Texas↗
USGS1984

Food of young-of-the-year lake trout ( Salvelinus namaycush ) in Presque Isle Harbor, Lake Superior

The food habits of young lake trout ( Salvelinus namaycush ) were studied by examining the digestive tracts of 293 young-of-the-year collected in Presque Isle Harbor, Lake Superior. Lake trout in the 25 to 27-mm length range started to eat food organisms before all of their yolk material was absorbed. Organisms consumed by the 25 to 27-mm young-of-the-year included Chironomidae, Copepoda (Harpacticoida, Calanoida, Cyclopoida), and Cladocerea ( Daphnia spp., Bosmina sp., Chydorus sp.). Chironomid pupae and chironomid larvae accounted for 74% and 5%, respectively, of the total volume of food eaten by the young lake trout in Presque Isle Harbor. Although copepods, cladocerans, and mysids were present in many stomachs, their contribution to the total volume of food was only 15%. Some lake trout in the 32 to 54-mm length range had consumed fry of sculpin ( Cottus spp.) or rainbow smelt ( Osmerus mordax ), but the overall contribution of fish fry to the total volume of food was only 4% (frequency of occurrence, 10%). The lake trout in Presque Isle Harbor fed heavily on planktonic organisms, sparingly on benthic organisms, and were opportunistic feeders that appeared to prey on whatever forage organisms were available in the shallow nearshore waters.

Journal of Great Lakes Research↗
USGS2020

Step increase in eastern U.S. precipitation linked to Indian Ocean warming

A step increase in annual precipitation over the eastern U.S. in the early 1970’s commenced five decades of invigorated hydroclimate, with ongoing impacts on streamflow and water resources. Despite its far-reaching impacts, the dynamical origin of this change is unknown. Here, analyses of a century of atmospheric and oceanic data trace the dynamics to changes in the Indian Ocean. Spring and fall precipitation explain more than half the annual eastern-U.S. precipitation variance over the century, and changes in fall are predominantly responsible for the step increase. The driving mechanism is emergence of a pan-Pacific atmospheric wave emanating from deep convection over the warming Indian Ocean. Documentation of this fall teleconnection draws attention to projected anthropogenic increases in tropical oceanic heat content, and their potential impacts on hydroclimate of the midlatitudes.

Geophysical Research Letters↗
USGS2021

Distinguishing between regression model fits to global mean sea level reconstructions

Global mean sea level (GMSL) has been rising since the last century, posing a serious challenge for the coastal areas. A variety of regression models have been utilized for determining GMSL rise over the past one hundred years, resulting in a large spread of sea level rise rates and multidecadal variations. In this study, we develop a new nonparametric noise model that is data-dependent and considers overfitting due to regression. The noise model is used to determine whether one regression model has significantly better skill than others over the period 1900–2010. The choices of background noise and GMSL reconstruction influence whether two sea level models can be statistically distinguished. With our new nonparametric noise spectra, the differences of model skills in explaining sea level variance are significant only in 34% of model comparisons. However, stepwise trends with three inflection points are significantly more skillful than the linear, quadratic, or exponential trend for most GMSL reconstructions, suggesting the importance of multidecadal variability of sea level rise in the twentieth century. Nevertheless, stepwise trend models cannot be distinguished from models with a long-term harmonic oscillation, indicating that the shape of multidecadal variability is not conclusive. The multidecadal variability is also significant in the steric and barystatic sea level contributions and is related to both natural and anthropogenic forcings. GMSL predictions based on regression fits in the twentieth century underestimate the sea level rise rate over the period 2011–2020 because the sea level acceleration in the recent decade (2011–2020) is not well represented.

Journal of Geophysical Research- Oceans↗