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At least 793 records · Page 44Linked to original sources

Chemical evolution and estimated flow velocity of water in the Trinity Aquifer, south-central Texas

Three permeable zones with varying lithology and water chemistry compose the Trinity aquifer, a principal source of water in the 5,500- square-mile study area in south-central Texas. The upper permeable zone locally yields small quantities of water to wells and was not included in this study. The middle permeable zone primarily is composed of limestone with minor amounts of dolostone. Terrigenous sand and marine limestone, with minor amounts of dolostone, are the principal lithologic units in the lower permeable zone. Dissolved solids concentrations range from 329 to 1,820 milligrams per liter in water samples from the middle permeable zone and from 518 to 3,030 milligrams per liter in water samples from the lower permeable zone. Principal hydrochemical facies in the middle permeable zone are calcium magnesium bicarbonate and calcium magnesium sulfate. Hydrochemical facies in ground-water samples from the lower permeable zone vary. Tritium concentrations as large as 5.3 tritium units in the southeastern part of the study area are indicative of relatively recent recharge. Results of a geochemical mass balance simulation along a flowpath in the middle permeable zone indicate a mass transfer of 4.25 millimoles per liter of dolomite dissolved, 5.74 millimoles per liter of gypsum dissolved, 0.46 millimole per liter of sodium chloride dissolved, 8.07 millimoles per liter of calcite precipitated, and 0.67 millimole per liter of calcium-for-sodium cation exchange between solid and aqueous phases. These results support dedolomitization as a principal chemical process in the middle permeable zone of the Trinity aquifer. Results of a simulation along a flowpath in the lower permeable zone indicate a mass transfer of 0.41 millimole per liter of dolomite dissolved, 0.001 millimole per liter of gypsum dissolved, 9.58 millimoles per liter of sodium chloride dissolved, 1.09 millimoles per liter of calcite precipitated, and 1.11 millimoles per liter of sodium-forcalcium cation exchange between solid and aqueous phases. Lower permeable zone processes indicate sodium chloride dissolution, dedolomitization, and cation exchange. Ground-water-flow velocities determined from adjusted carbon-14 ages, calculated using NETPATH, for selected flowpaths in the middle and lower permeable zones were about 1.7 feet per year and less than about 4.4 feet per year, respectively.

Texas↗

Evolution of methods for evaluating the occurrence of floods

A brief summary is given of the history of methods of expressing flood potentialities, proceeding from simple flood formulas to statistical methods of flood-frequency analysis on a regional basis. Current techniques are described and evaluated. Long-term flood records in the United States show no justification for the adoption of a single type of theoretical distribution of floods. The significance and predictive values of flood-frequency relations are considered. Because of the length of flood records available and the interdependence of flood events within a region, the probable long-term average magnitudes of floods of a given recurrence interval are uncertain. However, if the magnitudes defined by the records available are accepted, the relative effects of drainage-basin characteristics and climatic variables can be determined with a reasonable degree of assurance.

Water Supply Paper↗

The geochemical evolution of aqueous sodium in the Black Creek Aquifer, Horry and Georgetown counties, South Carolina

The Black Creek aquifer contains dilute seawater near the North Carolina State line, probably the result of incomplete flushing of ancient seawater. Data do not indicate that the dilute seawater has migrated toward areas of fresh ground-water withdrawals. The concentration of chloride in ground-water samples ranges from 5 to 720 milligrams per liter and that of sodium from 160 to 690 milligrams per liter. Ion-exchange reactions (sodium for calcium and fluoride for hydroxyl) occur with the calcium carbonate dissolution reaction which produces calcium, bicarbonate, and hydroxyl ions. The reaction sequence and stoichiometry result in an aqueous solution in which the sum of bicarbonate and chloride equivalents per liter is equal to the equivalents per liter of sodium. Calcium ions are exchanged for sodium ions derived from sodium-rich clays upgradient of the dilute seawater. The cation-exchange reaction equilibrates at a sodium concentration of 280 milligrams per liter. Amounts of sodium greater than 280 milligrams per liter are contributed from dilute seawater. The cation-exchange reaction approaches an equilibrium which represents a mass-action limit in terms of the ratio of sodium to calcium in solution versus the ratio of exchangeable sodium to calcium on clay surfaces. Where the limit of calcium carbonate solubility is approached and dissolution ceases, some precipitation of calcite probably takes place. The dissolution of calcite exposes fossil shark teeth which release fluoride ions to the ground water through anion exchange with aqueous hydroxyl ions.

South Carolina↗

Distribution of mineral phases in the Eocene Green River Formation, Piceance Basin, Colorado – Implications for the evolution of Lake Uinta

The mineralogy of the Eocene Green River Formation in the Piceance Basin, Colorado, has been the subject of numerous studies since the 1920s. Most previous work has focused on the resource potential of these lacustrine mudrocks, which in addition to substantial oil shale potential (in-place resources of 353 billion barrels of synthetic crude oil for rocks yielding at least 25 gallons per ton, GPT), includes nahcolite, a currently utilized soda ash resource, and dawsonite, a potential alternative source of aluminum. Another reason to study the mineralogy in this system is that the geographic and stratigraphic distribution of various authigenic minerals may provide insights into the geochemistry and depositional environment of the long-lived Eocene Lake Uinta. In this study, legacy non-quantitative (presence/absence) X-ray diffraction (XRD) data recently published by the U.S. Geological Survey (USGS) for more than nine-thousand samples collected from thirty coreholes in the Green River Formation, Piceance Basin were examined. These data were used to better define the stratigraphic and paleogeographic extent of a set of indicator minerals (illite, analcime, albite, dawsonite, and nahcolite) within the Piceance Basin lacustrine strata. This set of minerals was selected based on observations from previous work and variability in their occurrence and co-occurrence within the Piceance Basin. The USGS database has been used to (1) construct maps showing geographic variations in mineral occurrences for 14 stratigraphically defined rich and lean oil shale zones; (2) assess co-occurrences of indicator minerals; and (3) compare occurrence results with quantitative XRD datasets collected on Piceance Basin oil shales. Occurrences of many authigenic minerals (analcime, dawsonite, and nahcolite) varied in the lacustrine strata near and around the depocenter, but others, like quartz, dolomite, and feldspar (potassium + undifferentiated), were widely and consistently present (>90% of samples) across the basin. Shifts in the distribution of indicator mineral occurrences generally coincide with changes identified in previous lake history descriptions and indicate that the water chemistry of Lake Uinta varied significantly going from near-shore to the depocenter and through time.

Colorado↗

Late-Holocene climate evolution at the WAIS Divide site, West Antarctica: Bubble number-density estimates

A surface cooling of ∼1.7°C occurred over the ∼two millennia prior to ∼1700 CE at the West Antarctic ice sheet (WAIS) Divide site, based on trends in observed bubble number-density of samples from the WDC06A ice core, and on an independently constructed accumulation-rate history using annual-layer dating corrected for density variations and thinning from ice flow. Density increase and grain growth in polar firn are both controlled by temperature and accumulation rate, and the integrated effects are recorded in the number-density of bubbles as the firn changes to ice. Number-density is conserved in bubbly ice following pore close-off, allowing reconstruction of either paleotemperature or paleo-accumulation rate if the other is known. A quantitative late-Holocene paleoclimate reconstruction is presented for West Antarctica using data obtained from the WAIS Divide WDC06A ice core and a steady-state bubble number-density model. The resultant temperature history agrees closely with independent reconstructions based on stable-isotopic ratios of ice. The ∼1.7°C cooling trend observed is consistent with a decrease in Antarctic summer duration from changing orbital obliquity, although it remains possible that elevation change at the site contributed part of the signal. Accumulation rate and temperature dropped together, broadly consistent with control by saturation vapor pressure.

Journal of Glaciology↗

Molecular epidemiology of infectious hematopoietic necrosis virus reveals complex virus traffic and evolution within southern Idaho aquaculture

Infectious hematopoietic necrosis virus (IHNV) is a rhabdovirus which infects salmon and trout and may cause disease with up to 90% mortality. In the Hagerman Valley of Idaho, IHNV is endemic or epidemic among numerous fish farms and resource mitigation hatcheries. A previous study characterizing the genetic diversity among 84 IHNV isolates at 4 virus-endemic rainbow trout farms indicated that multiple lineages of relatively high diversity co-circulated at these facilities (Troyer et al. 2000 J Gen Virol. 81:2823-2832). We tested the hypothesis that high IHNV genetic diversity and co-circulating lineages are present in aquaculture facilities throughout this region. In this study, 73 virus isolates from 14 rainbow trout farms and 3 state hatcheries in the Hagerman Valley, isolated between 1978 and 1999, were genetically characterized by sequence analysis of a 303 nucleotide region of the glycoprotein gene. Phylogenetic and epidemiological analyses showed that multiple IHNV lineages co-circulate in a complex pattern throughout private trout farms and state hatcheries in the valley. IHNV maintained within the valley appears to have evolved significantly over the 22 yr study period.

Diseases of Aquatic Organisms↗

Analyzing multi-year nitrate concentration evolution in Alabama aquatic systems using a machine learning model

Rising nitrate contamination in water systems poses significant risks to public health and ecosystem stability, necessitating advanced modeling to understand nitrate dynamics more accurately. This study applies the long short-term memory (LSTM) modeling to investigate the hydrologic and environmental factors influencing nitrate concentration dynamics in rivers and aquifers across the state of Alabama in the southeast of the United States. By integrating dynamic data such as streamflow and groundwater levels with static catchment attributes, the machine learning model identifies primary drivers of nitrate fluctuations, offering detailed insights into the complex interactions affecting multi-year nitrate concentrations in natural aquatic systems. In addition, a novel LSTM-based approach utilizes synthetic surface water nitrate data to predict groundwater nitrate levels, helping to address monitoring gaps in aquifers connected to these rivers. This method reveals potential correlations between surface water and groundwater nitrate dynamics, which is particularly meaningful given the lack of water quality observations in many aquifers. Field applications further show that, while the LSTM model effectively captures seasonal trends, limitations in representing extreme nitrate events suggest areas for further refinement. These findings contribute to data-driven water quality management, enhancing understanding of nitrate behavior in interconnected water systems.

Alabama↗

Structural evolution of the east Sierra Valley system (Owens Valley and vicinity), California: a geologic and geophysical synthesis

The tectonically active East Sierra Valley System (ESVS), which comprises the westernmost part of the Walker Lane-Eastern California Shear Zone, marks the boundary between the highly extended Basin and Range Province and the largely coherent Sierra Nevada-Great Valley microplate (SN-GVm), which is moving relatively NW. The recent history of the ESVS is characterized by oblique extension partitioned between NNW-striking normal and strike-slip faults oriented at an angle to the more northwesterly relative motion of the SN-GVm. Spatially variable extension and right-lateral shear have resulted in a longitudinally segmented valley system composed of diverse geomorphic and structural elements, including a discontinuous series of deep basins detected through analysis of isostatic gravity anomalies. Extension in the ESVS probably began in the middle Miocene in response to initial westward movement of the SN-GVm relative to the Colorado Plateau. At ca. 3-3.5 Ma, the SN-GVm became structurally separated from blocks directly to the east, resulting in significant basin-forming deformation in the ESVS. We propose a structural model that links high-angle normal faulting in the ESVS with coeval low-angle detachment faulting in adjacent areas to the east.

California↗

Diverging mineral chemistry of iron and nickel throughout Earth’s changing redox conditions reveals foundation for their evolution as protein cofactors

Iron (Fe) and nickel (Ni) were both foundational to early metabolism, yet their biological trajectories diverged as Earth’s surface redox state changed. Here, we integrate mineral chemistry network analysis, protein metal-site coordination-sphere analysis, and curated redox comparisons to test how geochemistry and metalloprotein architecture co-evolved. Mineral network analyses show broader electronegativity variation and network diversity for Fe-bearing minerals through time relative to Ni-bearing minerals. In structural analyses of protein metal centers in a combined Fe/Ni protein structure set, it is shown that Fe- and Ni-associated environments differ in amino-acid composition, hydropathy structure, and cysteine representation. The greater chemical diversity and electronegativity variation in Fe minerals mirror the higher redox and structural versatility of Fe-binding proteins. The presence of Fe in a broader range of mineral and protein environments demonstrates the chemical adaptability of the metal, from the anoxic Archean to oxidative Earth surface conditions following the Great Oxidation Event. Iron, with its broad redox potential range in Fe-oxidoreductases, has a central role in both anaerobic and aerobic metabolisms. Nickel, by contrast, is less widespread in biology. Today, Ni is predominantly employed in deeply branching anaerobic pathways and by proteins with narrower redox potential ranges. Our results show that evolutionary processes, constrained by metal chemistry, habitually utilize Fe as a redox generalist while retaining Ni in specialized roles. The divergent paths of Ni and Fe, from rocks to proteins, demonstrate the intimate relationship between planetary geochemistry and metabolic origins on Earth and suggest that Fe/Ni geochemistry may inform habitability assessments in extraterrestrial environments when interpreted within specific planetary environmental contexts.

Life↗

Genesis and evolution of ferromanganese crusts from the summit of Rio Grande Rise, southwest Atlantic Ocean

The Rio Grande Rise (RGR) is a large elevation in the Atlantic Ocean and known to host potential mineral resources of ferromanganese crusts (Fe–Mn), but no investigation into their general characteristics have been made in detail. Here, we investigate the chemical and mineralogical composition, growth rates and ages of initiation, and phosphatization of relatively shallow-water (650–825 m) Fe–Mn crusts dredged from the summit of RGR by using computed tomography, X-ray diffraction, 87 Sr/ 86 Sr ratios, U–Th isotopes, and various analytical techniques to determine their chemical composition. Fe–Mn crusts from RGR have two distinct generations. The older one has an estimated age of initiation around 48–55 Ma and was extensively affected by post-depositional processes under suboxic conditions resulting in phosphatization during the Miocene (from 20 to 6.8 Ma). As a result, the older generation shows characteristics of diagenetic Fe–Mn deposits, such as low Fe/Mn ratios (mean 0.52), high Mn, Ni, and Li contents and the presence of a 10 Å phyllomanganate, combined with the highest P content among crusts (up to 7.7 wt %). The younger generation is typical of hydrogenetic crusts formed under oxic conditions, with a mean Fe/Mn ratio of 0.75 and mean Co content of 0.66 wt %, and has the highest mean contents of Bi, Nb, Ni, Te, Rh, Ru, and Pt among crusts formed elsewhere. The regeneration of nutrients from local biological productivity in the water column is the main source of metals to crusts, providing mainly metals that regenerate rapidly in the water column and are made available at relatively shallow water depths (Ni, As, V, and Cd), at the expense of metals of slower regeneration (Si and Cu). Additionally, important contributions of nutrients may derive from various water masses, especially the South Atlantic Mode Water and Antarctic Intermediate Water (AAIW). Bulk Fe–Mn crusts from the summit of RGR plateau are generally depleted in metals considered of greatest economic interest in crusts like Co, REE, Mo, Te, and Zr, but are the most enriched in the critical metals Ni and Li compared to other crusts. Further investigations are warranted on Fe–Mn crusts from deeper-water depths along the RGR plateau and surrounding areas, which would less likely be affected by phosphatization.

Rio Grande Rise↗

Evolution and taxonomy of the Paleogene calcareous nannofossil genus Hornibrookina

The genus Hornibrookina consists of enigmatic calcareous nannofossils that first appeared shortly after the K-Pg mass extinction. Due to their relative paucity in most published sections, specimens of this genus have not been previously studied in detail and their paleobiogeographic preferences and evolutionary history have been poorly understood. Biostratigraphic and morphometric analyses of Hornibrookina specimens from outcrops and cores from the Atlantic Ocean, the North Sea, the Southern Ocean, the Indian Ocean, North America, South America, Africa, and New Zealand resulted in a comprehensive and detailed documentation of this group of calcareous nannofossils. Biostratigraphic ranges for each species are refined and a hypothetical evolutionary lineage for this genus is proposed. Two new species (Hornibrookina gracila and Hornibrookina indistincta), two new combinations (Hornibrookina elegans and Hornibrookina australis arca) and one new subspecies (Hornibrookina australis australis) are described. Morphometric analyses prove that Hornibrookina edwardsii and Hornibrookina teuriensis are distinctly different species with biostratigraphically useful ranges. Hornibrookina apellanizii is shown to be invalid.

Micropaleontology↗

Origins, evolutions, and future directions of Landsat science products for advancing global inland water and coastal ocean observations

In April 2020, the U.S. Geological Survey (USGS) Earth Resources Observation and Science (EROS) Center introduced a Level 2 provisional Aquatic Reflectance (AR) product for the Landsat 8 Operational Land Imager (OLI), marking the initial phase in developing a standardized global product for Landsat-derived surface water measurements. The goal of USGS EROS aquatic product research and development is to prepare for an operational processing architecture for Landsat Collection 3 in the late 2020s that will enable use of quality-controlled data for emerging Landsat aquatic science applications. To achieve this, we released a subset of the Landsat 8/9 provisional AR products (Crawford et al., 2025, https://doi.org/10.5066/P14MBBRM) and examined its general performance through the Science Algorithms to Operations (SATO) framework alongside quantitative assessment using community made inland water data records (GLObal Reflectance community dataset for Imaging and optical sensing of Aquatic environments, GLORIA) and radiometric coastal validation platforms (NASA’s Ocean Color component of the Aerosol Robotic Network, AERONET-OC). Variability within the validation datasets indicate that the performance of the Landsat 8/9 provisional AR retrieval is highly context-dependent; errors are minimal in optically simple waters (e.g., clear to moderately turbid coastal waters) but increase considerably in optically complex waters where factors such as elevated levels of turbidity, chlorophyll (Chl a ) concentrations, or colored dissolved organic matter (CDOM) dominate the water column. Additionally, this paper examines key algorithmic considerations for atmospheric correction, highlighting factors that influence accuracy, scalability, and computational efficiency necessary for collection processing in the operational Landsat Product Generation System (LPGS). This paper is intended to communicate with aquatic scientists, satellite oceanographers, and the broader Earth observation community on the origins, requirements, challenges, successes, and future objectives for operationalizing global AR data products for Landsat satellite missions.

Earth System Science Data↗

Genomes & islands & evolution: Oh my!

A central question in evolutionary biology is how lineages quickly diversify to occupy different ecological niches, along with determining genomic factors that facilitate evolutionary change. Isolated, oceanic archipelagos are famous for adaptive radiations characterized by endemic, species-rich clades with substantial ecological variation, yet genome resources key to determining eco-evo processes are generally lacking. Here I present a comparison of the number of genome reference assemblies available (as of May 31, 2023) for three major eukaryotic lineages, briefly describe genome sequencing and benchmarking strategies, and highlight as a case study a genome assembly project for Bidens hawaiensis (Koʻokoʻolau, Asteraceae or Compositae; Coreopsidae), a member of a hexaploid Hawaiian plant adaptive radiation. The total number of plant genome references (1,394) was found to substantially lag the total number of genome references for animal (6,003) and fungi (4,400). Improvements to the quality of de novo assembled genomes are fueled by second- and third-generation long-read sequencing advancements, among other sequencing approaches. In conjunction, strategies to improve genome contiguity include optical maps, Hi-C chromatin capture, or trio binning. Continual improvements to genome sequencing and assembly algorithms have brought within reach telomere-to-telomere genome assemblies, albeit this level of sequencing has to date only been achieved in a few cases. With improvements in sequencing techniques and per-base pair costs that continue to trend downward, the number of high-quality genomes is anticipated to continue to increase, leading to the filling in of taxonomic gaps and sampling of groups of taxa from under sampled geographic areas. Increasing the number of plant genome resources available for the study of island endemism could help to shed light on genome-phenome relationships and genome characteristics that have produced the stunning biological diversity that we now observe across the globe.

Capitulum↗