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At least 649 records · Page 36Linked to original sources

Differences in detection of Aeromonas salmonicida in covertly infected salmonid fishes by the stress-inducible furunculosis test and culture-based assays

Accurate detection of Aeromonas salmonicida subsp. salmonicida (the cause of furunculosis disease) in covertly infected salmonids is difficult and is a cause of concern for those involved in fish health inspection and resource management programs. In this study, we examined populations of brook trout Salvelinus fontinalis , Atlantic salmon Salmo salar , and lake trout Salvelinus namaycush that previously sustained natural episodes of furunculosis. Consequently, the sampled fish were presumed to harbor latent infections. Mucus, gill, liver, kidney, heart, spleen, and intestine samples ( N = 100 fish per group sampled) were processed and examined by (1) direct dilution counts and (2) quadrant streaking after a 48‐h pre‐enrichment in trypticase soy broth (TSB). Another subsample of fish from each group was then subjected to stress‐inducible furunculosis tests. Stress tests detected A. salmonicida in three of four groups of fish that were examined whereas the pathogen was detected in only two of the groups analyzed with culture‐based assays. Although pre‐enrichment in TSB enhanced detection within internal sampling sites including the liver, heart, spleen, and kidney, enrichment did not enhance detection from mucus, gill, or intestinal samples.

Journal of Aquatic Animal Health↗

The 1999 Mw 7.1 Hector Mine, California, earthquake: A test of the stress shadow hypothesis?

We test the stress shadow hypothesis for large earthquake interactions by examining the relationship between two large earthquakes that occurred in the Mojave Desert of southern California, the 1992 M w 7.3 Landers and 1999 M w 7.1 Hector Mine earthquakes. We want to determine if the 1999 Hector Mine earthquake occurred at a location where the Coulomb stress was increased (earthquake advance, stress trigger) or decreased (earthquake delay, stress shadow) by the previous large earthquake. Using four models of the Landers rupture and a range of possible hypocentral planes for the Hector Mine earthquake, we discover that most scenarios yield a Landers-induced relaxation (stress shadow) on the Hector Mine hypocentral plane. Although this result would seem to weigh against the stress shadow hypothesis, the results become considerably more uncertain when the effects of a nearby Landers aftershock, the 1992 M L 5.4 Pisgah earthquake, are taken into account. We calculate the combined static Coulomb stress changes due to the Landers and Pisgah earthquakes to range from -0.3 to +0.3 MPa (- 3 to +3 bars) at the possible Hector Mine hypocenters, depending on choice of rupture model and hypocenter. These varied results imply that the Hector Mine earthquake does not provide a good test of the stress shadow hypothesis for large earthquake interactions. We use a simple approach, that of static dislocations in an elastic half-space, yet we still obtain a wide range of both negative and positive Coulomb stress changes. Our findings serve as a caution that more complex models purporting to explain the triggering or shadowing relationship between the 1992 Landers and 1999 Hector Mine earthquakes need to also consider the parametric and geometric uncertainties raised here.

California↗

Testing small-aperture array analysis on well-located earthquakes, and application to the location of deep tremor

We have here analyzed local and regional earthquakes using array techniques with the double aim of quantifying the errors associated with the estimation of propagation parameters of seismic signals and testing the suitability of a probabilistic location method for the analysis of nonimpulsive signals. We have applied the zero-lag cross-correlation method to earthquakes recorded by three dense arrays in Puget Sound and Vancouver Island to estimate the slowness and back azimuth of direct P waves and S waves. The results are compared with the slowness and back azimuth computed from the source location obtained by the analysis of data recorded by the Pacific Northwest seismic network (PNSN). This comparison has allowed a quantification of the errors associated with the estimation of slowness and back azimuth obtained through the analysis of array data. The statistical analysis gives ??BP = 10?? and ??BS = 8?? as standard deviations for the back azimuth and ??SP = 0.021 sec/km and ??SS = 0.033 sec /km for the slowness results of the P and S phases, respectively. These values are consistent with the theoretical relationship between slowness and back azimuth and their uncertainties. We have tested a probabilistic source location method on the local earthquakes based on the use of the slowness estimated for two or three arrays without taking into account travel-time information. Then we applied the probabilistic method to the deep, nonvolcanic tremor recorded by the arrays during July 2004. The results of the tremor location using the probabilistic method are in good agreement with those obtained by other techniques. The wide depth range, of between 10 and 70 km, and the source migration with time are evident in our results. The method is useful for locating the source of signals characterized by the absence of pickable seismic phases.

Bulletin of the Seismological Society of America↗

Laboratory tests of three Z‐Land Fairfield Nodal 5‐Hz, three‐component sensors

We conduct a number of laboratory tests at the Albuquerque Seismological Laboratory to verify the self‐noise and fidelity in which 3 three‐component Fairfield Nodal Z‐Land, Generation 2, 5‐Hz sensors are able to record seismic signals. In addition to the incoherent self‐noise of the sensors, we estimate the sensitivity of the units in digital volts/m/s, the damping, and the free period. These three parameters allow us to completely characterize the response of the instruments. We find that the responses of all components match a mean‐derived response to within 5% of amplitude and 0.03 radians in phase. This close agreement suggests that for most applications a nominal response is suitable. We also checked the timing of the units as compared to a Quanterra Q330HR and found good agreement up to 200samples/s . Finally, we compared the results of our noise tests on these sensors to a couple of nodal sensors recently deployed at the Community Wavefield Demonstration Experiment in north‐central Oklahoma and found that local site noise and not the sensor self‐noise is a fundamental limiter in the resolution of these deployed sensors at frequencies above ∼0.1Hz .

Seismological Research Letters↗

Testing the ShakeAlert earthquake early warning system using synthesized earthquake sequences

We test the behavior of the United States (US) West Coast ShakeAlert earthquake early warning (EEW) system during temporally close earthquake pairs to understand current performance and limitations. We consider performance metrics based on source parameter and ground‐motion forecast accuracy, as well as on alerting timeliness. We generate ground‐motion times series for synthesized earthquake sequences from real data by combining the signals from pairs of well‐recorded earthquakes (⁠4.4≤M≤7.1⁠) using time shifts ranging from −60 to +180 s. We examine fore‐ and aftershock sequences, near‐simultaneous events in different source regions, and simulated out‐of‐network and offshore earthquakes. We find that the operational ShakeAlert algorithms Earthquake Point‐source Integrated Code (EPIC) and Finite‐Fault Rupture Detector (FinDer) and the Propagation of Local Undamped Motion (PLUM) method perform largely as expected: EPIC provides the best source location estimates and is often fastest but can underestimate magnitudes or, in extreme cases, miss large earthquakes; FinDer provides real‐time line‐source models and unsaturated magnitude estimates for large earthquakes but currently cannot process concurrent events and may mislocate offshore earthquakes; PLUM identifies pockets of strong ground motion, but can overestimate alert areas. Implications for system performance are: (1) spatially and temporally close events are difficult to identify separately; (2) challenging scenarios with foreshocks that are close in space and time can lead to missed alerts for large earthquakes; and (3) in these situations the algorithms can often estimate ground motion better than source parameters. To improve EEW, our work suggests revisiting the current algorithm weighting in ShakeAlert, to continue developments that focus on using ground‐motion data to aggregate alerts from multiple algorithms, and to investigate methods to optimally leverage algorithm ground‐motion estimates. For testing and certification of EEW performance in ShakeAlert and other EEW systems where applicable, we also suggest that 25 of our 73 scenarios become part of the baseline data set.

California↗

Are wolves saving Yellowstone's aspen? A landscape-level test of a behaviorally mediated trophic cascade

Behaviorally mediated trophic cascades (BMTCs) occur when the fear of predation among herbivores enhances plant productivity. Based primarily on systems involving small-bodied predators, BMTCs have been proposed as both strong and ubiquitous in natural ecosystems. Recently, however, synthetic work has suggested that the existence of BMTCs may be mediated by predator hunting mode, whereby passive (sit-and-wait) predators have much stronger effects than active (coursing) predators. One BMTC that has been proposed for a wide-ranging active predator system involves the reintroduction of wolves ( Canis lupus ) to Yellowstone National Park, USA, which is thought to be leading to a recovery of trembling aspen ( Populus tremuloides ) by causing elk ( Cervus elaphus ) to avoid foraging in risky areas. Although this BMTC has been generally accepted and highly popularized, it has never been adequately tested. We assessed whether wolves influence aspen by obtaining detailed demographic data on aspen stands using tree rings and by monitoring browsing levels in experimental elk exclosures arrayed across a gradient of predation risk for three years. Our study demonstrates that the historical failure of aspen to regenerate varied widely among stands (last recruitment year ranged from 1892 to 1956), and our data do not indicate an abrupt cessation of recruitment. This pattern of recruitment failure appears more consistent with a gradual increase in elk numbers rather than a rapid behavioral shift in elk foraging following wolf extirpation. In addition, our estimates of relative survivorship of young browsable aspen indicate that aspen are not currently recovering in Yellowstone, even in the presence of a large wolf population. Finally, in an experimental test of the BMTC hypothesis we found that the impacts of elk browsing on aspen demography are not diminished in sites where elk are at higher risk of predation by wolves. These findings suggest the need to further evaluate how trophic cascades are mediated by predator–prey life history and ecological context.

Yellowstone↗

Soil-test N recommendations augmented with PEST-optimized RZWQM simulations

Improved understanding of year-to-year late-spring soil nitrate test (LSNT) variability could help make it more attractive to producers. We test the ability of the Root Zone Water Quality Model (RZWQM) to simulate watershed-scale variability due to the LSNT, and we use the optimized model to simulate long-term field N dynamics under related conditions. Autoregressive techniques and the automatic parameter calibration program PEST were used to show that RZWQM simulates significantly lower nitrate concentration in discharge from LSNT treatments compared with areas receiving fall N fertilizer applications within the tile-drained Walnut Creek, Iowa, watershed (>5 mg N L-1 difference for the third year of the treatment, 1999). This result is similar to field-measured data from a paired watershed experiment. A statistical model we developed using RZWQM simulations from 1970 to 2005 shows that early-season precipitation and early-season temperature account for 90% of the interannual variation in LSNT-based fertilizer N rates. Long-term simulations with similar average N application rates for corn (Zea mays L.) (151 kg N ha-1) show annual average N loss in tile flow of 20.4, 22.2, and 27.3 kg N ha -1 for LSNT, single spring, and single fall N applications. These results suggest that (i) RZWQM is a promising tool to accurately estimate the water quality effects of LSNT; (ii) the majority of N loss difference between LSNT and fall applications is because more N remains in the root zone for crop uptake; and (iii) year-to-year LSNT-based N rate differences are mainly due to variation in early-season precipitation and temperature. Copyright ?? 2010 by the American Society of Agronomy, Crop Science Society of America, and Soil Science Society of America. All rights reserved.

Journal of Environmental Quality↗

A field test for differences in condition among trapped and shot mallards

We tested predictions from the condition bias hypothesis (Weatherland and Greenwood 1981) regarding the effects of sampling methods of body weights of mallards ( Anas platyrhynchos ) at White River National Wildlife Refuge (WRNWR), Arkansas, during 24 November-8 December 1985. Body weights of 84 mallards caught with unbaited rocket nets in a natural wetland were used as experimental controls and compared to the body weights of 70 mallards captured with baited rocket nets, 86 mallards captured with baited swim-in traps, and 130 mallards killed by hunters. We found no differences (P > 0.27) in body weight among sampling methods, but body condition (wt/wing length) of the birds killed by hunters was less (P < 0.02) than that of the controls. Power of the test statistics to reject the null hypothesis of equal body weights among sampling methods was > 0.75 for differences > 50 g. The condition bias hypothesis probably applies to ducks killed by hunters but not to trapping operations when substantial (> 20 at 1 time) numbers of birds are captured.

Arkansas↗

Generalized procedures for testing hypotheses about survival or recovery rates

Comparisons of survival or recovery rates from different time periods or geographic regions may be difficult to accomplish using the Z-tests suggested by Brownie et al. (1985). We propose a general Chi-square statistic that addresses an unambiguous null hypothesis of homogeneity among several survival or recovery rates. With this statistic, specific hypotheses of differences in rates can be simultaneously tested using contrasts. If necessary, a posteriori multiple comparisons can also be conducted that incorporate an adjustment for Type I error.

Journal of Wildlife Management↗

Testing assumptions for unbiased estimation of survival of radiomarked harlequin ducks

Unbiased estimates of survival based on individuals outfitted with radiotransmitters require meeting the assumptions that radios do not affect survival, and animals for which the radio signal is lost have the same survival probability as those for which fate is known. In most survival studies, researchers have made these assumptions without testing their validity. We tested these assumptions by comparing interannual recapture rates (and, by inference, survival) between radioed and unradioed adult female harlequin ducks ( Histrionicus histrionicus ), and for radioed females, between right-censored birds (i.e., those for which the radio signal was lost during the telemetry monitoring period) and birds with known fates. We found that recapture rates of birds equipped with implanted radiotransmitters (21.6 ± 3.0%; x̄ ± SE) were similar to unradioed birds (21.7 ± 8.6%), suggesting that radios did not affect survival. Recapture rates also were similar between right-censored (20.6 ± 5.1%) and known-fate individuals (22.1 ± 3.8%), suggesting that missing birds were not subject to differential mortality. We also determined that capture and handling resulted in short-term loss of body mass for both radioed and unradioed females and that this effect was more pronounced for radioed birds (the difference between groups was 15.4 ± 7.1 g). However, no difference existed in body mass after recapture 1 year later. Our study suggests that implanted radios are an unbiased method for estimating survival of harlequin ducks and likely other species under similar circumstances.

Alaska↗

Field testing of commercially manufactured capture collars on white-tailed deer

We conducted 31 tests of commercially manufactured capture collars on female white-tailed deer ( Odocoileus virginianus ) in the Superior National Forest, Minnesota, under temperatures from -37C to 22C. Deer were recaptured in 28 of the 31 tests; in the 3 failures, we remotely released the collars from the deer. Communication with the collars was achieved from up to 3.0 km on the ground and 26.5 km from the air.

Minnesota↗

Avian models for toxicity testing

The use of birds as test models in experimental and environmental toxicology as related to health effects is reviewed, and an overview of descriptive tests routinely used in wildlife toxicology is provided. Toxicologic research on birds may be applicable to human health both directly by their use as models for mechanistic and descriptive studies and indirectly as monitors of environmental quality. Topics include the use of birds as models for study of teratogenesis and embryotoxicity, neurotoxicity, behavior, trends of environmental pollution, and for use in predictive wildlife toxicology. Uses of domestic and wild-captured birds are discussed.

Journal of the American College of Toxicology↗

Dye tracer tests to determine time-of-travel in Iowa streams, 1990–2006

Dye-tracing tests have been used by the U.S. Geological Survey, Iowa Water Science Center to determine the time-of-travel in selected Iowa streams from 1990-2006. Time-of-travel data are tabulated for 309 miles of stream reaches in four Iowa drainage basins: the Des Moines, Raccoon, Cedar, and Turkey Rivers. Time-of-travel was estimated in the Des Moines River, Fourmile Creek, North Raccoon River, Raccoon River, Cedar River, and Roberts Creek. Estimation of time-of-travel is important for environmental studies and in determining fate of agricultural constituents and chemical movement through a waterway. The stream reaches range in length from slightly more than 5 miles on Fourmile Creek, to more than 137 miles on the North Raccoon River. The travel times during the dye-tracer tests ranged from 7.5 hours on Fourmile Creek to as long as 200 hours on Roberts Creek; velocities ranged from less than 4.50 feet per minute on Roberts Creek to more than 113 feet per minute on the Cedar River.

Iowa↗

Database of groundwater levels and hydrograph descriptions for the Nevada Test Site area, Nye County, Nevada

A database containing water levels measured from wells in and near areas of underground nuclear testing at the Nevada Test Site since 1941 was developed. The database provides information for each well including well construction, borehole lithology, units contributing water to the well, and general site remarks. Water-level information provided in the database includes measurement source, status, method, accuracy, and specific water-level remarks. Additionally, the database provides hydrograph narratives that document the water-level history and describe and interpret the water-level hydrograph for each well. Water levels in the database were quality assured and analyzed. Multiple conditions were assigned to each water‑level measurement to describe the hydrologic conditions at the time of measurement. General quality, temporal variability, regional significance, and hydrologic conditions are attributed to each water-level measurement.

Nevada↗

Drilling a Deep Geologic Test Well at Fort Pulaski National Monument, Georgia

The U.S. Geological Survey, in cooperation with the National Park Service, is drilling a deep geologic test well at Fort Pulaski National Monument, Georgia. The operation is scheduled to run between mid-February and mid-April 2010. When completed, the well will be about 1,500 feet deep. The purpose of this test well is to gain knowledge about the regional-scale Floridan aquifer, an important source of groundwater in the Savannah area. Also, cores obtained during drilling will enable geologists to study the last 60 million years of Earth history in this area.

Fact Sheet↗

Water-quality monitoring and studies of the formation and fate of trihalomethanes during the third injection, storage and recovery test at Lancaster, Antelope Valley, California, March 1998 through April 1999

The U.S. Geological Survey, in cooperation with the Los Angeles County Department of Public Works and the Antelope Valley-East Kern Water Agency, conducted three cycles of injection, storage, and recovery tests to evaluate the feasibility of artificially recharging ground water in the Lancaster area of Antelope Valley, California. During the third cycle (March 1998 through April 1999), the tests included investigations of the formation and fate of trihalomethanes in the aquifer. Trihalomethanes are disinfection by-products formed by reaction between natural dissolved organic carbon that is present in water and chlorine that is added during the drinking-water-treatment process. This report includes a discussion of the design of the investigation; descriptions of the sampling, analytical, and experimental methods used in the investigation; and a presentation of the data collected. During the third cycle, 60 million gallons of chlorinated water was injected into the aquifer through well 7N/12W-27P2 in the Los Angeles County Department of Public Works well field in Lancaster between April 15 and June 16, 1998. One hundred fifty million gallons of water was extracted from the same well between June 30, 1998, and April 29, 1999. Water-quality samples were collected during the entire cycle from the well and from a nearby set of nested piezometers, and were analyzed for residual chlorine, dissolved organic carbon, trihalomethane, major anion, and dissolved solid concentrations; ultraviolet absorbance spectra; and a number of field water-quality parameters. A statistical analysis was done to evaluate the analytical precision of the residual chlorine, dissolved organic carbon, trihalomethane, and ultraviolet absorbance measurements on these samples. The formation of trihalomethanes in the injection water was examined in laboratory experiments: Trihalomethane concentrations in samples of injection water were monitored during a storage period, and trihalomethane formation potential in the presence of excess chlorine was measured. The role of mixing between injection water and ground water and the conservative or non-conservative behavior of trihalomethanes was studied by adding a conservative tracer, sulfur hexafluoride, to the injection water and monitoring its concentration in the extraction water. The potential for biodegradation of trihalomethanes by aquifer bacteria was assessed in laboratory experiments: Microcosms containing ground water or extraction water and sediment or concentrated bacteria were spiked with trihalomethanes, and the amount of trihalomethanes was monitored during an incubation period. The potential for sorption of trihalomethanes to aquifer sediments was assessed in laboratory experiments: Mixtures of sediment and water were spiked with trihalomethanes, and then the trihalomethane concentrations were measured after an equilibration period.

Open-File Report↗

Data from stratigraphic test holes drilled at the U.S. Marine Corps Air Station, Cherry Point, North Carolina, 1994-2001, and periodic water levels, 2000-2003

Nine stratigraphic test holes, from 158 to 305 feet deep, were drilled at the U.S. Marine Corps Air Station at Cherry Point, North Carolina, between 1994 and 2001 by the U.S. Geological Survey. These test holes and subsequent wells provide information about the lithology, stratigraphy, and geology at the Marine Corps Air Station. In addition, ground-water-level data were collected at the Air Station through 2003. The U.S. Geological Survey also conducted high-resolution marine and land seismic surveys during this investigation. The ground-water-level data and locations of the seismic survey lines are included in this report. The stratigraphic data combined with the seismic data provide a basis for the delineation of paleochannels beneath the Air Station as well as information for the management of water resources at the Air Station.

Open-File Report↗

Fracture trace map and single-well aquifer test results in a carbonate aquifer in Berkeley County, West Virginia

These data contain information on the results of single-well aquifer tests, lineament analysis, and a bedrock geologic map compilation for the low-lying carbonate and shale areas of eastern Berkeley County, West Virginia. Efforts have been initiated by management agencies of Berkeley County in cooperation with the U.S. Geological Survey to further the understanding of the spatial distribution of fractures in the carbonate regions and their correlation with aquifer properties. This report presents transmissivity values from about 200 single-well aquifer tests and a map of fracture-traces determined from aerial photos and field investigations. Transmissivity values were compared to geologic factors possibly affecting its magnitude.

Open-File Report↗