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USGS2016

California State Waters Map Series — Monterey Canyon and vicinity, California

Introduction In 2007, the California Ocean Protection Council initiated the California Seafloor Mapping Program (CSMP), designed to create a comprehensive seafloor map of high-resolution bathymetry, marine benthic habitats, and geology within the 3-nautical-mile limit of California’s State Waters. The CSMP approach is to create highly detailed seafloor maps through collection, integration, interpretation, and visualization of swath bathymetry data, acoustic backscatter, seafloor video, seafloor photography, high-resolution seismic-reflection profiles, and bottom-sediment sampling data. The map products display seafloor morphology and character, identify potential marine benthic habitats, and illustrate both the surficial seafloor geology and shallow subsurface geology. The Monterey Canyon and Vicinity map area lies within Monterey Bay in central California. Monterey Bay is one of the largest embayments along the west coast of the United States, spanning 36 km from its northern to southern tips (in Santa Cruz and Monterey, respectively) and 20 km along its central axis. Not only does it contain one of the broadest sections of continental shelf along California’s coast, it also contains Monterey Canyon, one of the largest and deepest submarine canyons in the world. Note that the California’s State Waters limit extends farther offshore between Santa Cruz and Monterey so that it encompasses all of Monterey Bay. The coastal area within the map area is lightly populated. The community of Moss Landing (population, 204) hosts the largest commercial fishing fleet in Monterey Bay in its harbor. The map area also includes parts of the cities of Marina (population, about 20,000) and Castroville (population, about 6,500). Fertile lowlands of the Salinas River and Pajaro River valleys largely occupy the inland part of the map area, and land use is primarily agricultural. The offshore part of the map area lies completely within the Monterey Bay National Marine Sanctuary. The map area also includes Portuguese Ledge and Soquel Canyon State Marine Conservation Areas. Designated conservation and (or) recreation areas in the onshore part of the map area include Salinas River National Wildlife Refuge, Elkhorn Slough State Marine Conservation Area, Elkhorn Slough State Marine Reserve, Moss Landing Wildlife Area, Zmudowski and Salinas River State Beaches, and Marina Dunes Preserve. Monterey Bay, a geologically complex area within a tectonically active continental margin, lies between two major, converging strike-slip faults. The northwest-striking San Andreas Fault lies about 34 km east of Monterey Bay; this section of the fault ruptured in both the 1989 M6.9 Loma Prieta earthquake and the 1906 M7.8 great California earthquake. The northwest-striking San Gregorio Fault crosses Monterey Canyon west of Monterey Bay. Between these two regional faults, strain is accommodated by the northwest-striking Monterey Bay Fault Zone. Deformation associated with these major regional faults and related structures has resulted in uplift of the Santa Cruz Mountains, as well as the granitic highlands of the Monterey peninsula. Monterey Canyon begins in the nearshore area directly offshore of Moss Landing and Elkhorn Slough, and it can be traced for more than 400 km seaward, out to water depths of more than 4,000 m. Within the map area, the canyon can be traced for about 42 km to a water depth of about 1,520 m. The head of the canyon consists of three branches that begin about 150 m offshore of Moss Landing Harbor. At 500 m offshore, the canyon is already 70 m deep and 750 m wide. Large sand waves, which have heights from 1 to 3 m and wavelengths of about 50 m, are present along the channel axis in the upper 4 km of the canyon. Soquel Canyon is the most prominent tributary of Monterey Canyon within the map area. The head of Soquel Canyon is isolated from coastal watersheds and, thus, is considered inactive as a conduit for coarse sediment transport. North and south of Monterey and Soquel Canyons, the relatively flat continental shelf contains only a few rocky outcrop exposures. Bedrock is covered largely by sediment derived from the Salinas and Pajaro Rivers. North of Monterey Canyon, the broad and flat continental shelf dips gently seaward, to water depths of about 95 m. To the south, the shelf also dips slightly, to water depths of as much as 150 m along the canyon edge. In the map area, Monterey Canyon splits the Santa Cruz littoral cell (north of the canyon) and the southern Monterey littoral cell (south of the canyon). It is estimated that about 400,000 m 3 /yr of sand on average enters Monterey Canyon from both of these littoral cells. In the Santa Cruz littoral cell, sand generally travels east and south. Sand is supplied through sea cliff erosion, as well as from the San Lorenzo River, the Pajaro River, and several other smaller coastal watersheds. About 152,911 m 3 /yr of sand is dredged from the entrance channel of the Santa Cruz Small Craft Harbor north of the map area and then placed on beaches to the east (downdrift) of it. This sand feeds the beaches in the southeastern reach of the Santa Cruz littoral cell and (or) is eventually trapped and lost by Monterey Canyon. The southern Monterey Bay littoral cell in the map area consists of two subcells. From the head of Monterey Canyon to the Salinas River, littoral drift is dominantly to the north; sand entering the ocean from the Salinas River either is deposited offshore or travels north in the littoral zone, nourishing the beaches until it is transported down Monterey Canyon. From south of the Salinas River to the southern extent of the map area, coastal sediment is moved mainly to the south; dune erosion is the only significant source of sand in this subcell.

California↗

USGS2004

Surveying Cross Sections of the Kootenai River Between Libby Dam, Montana, and Kootenay Lake, British Columbia, Canada

The declining population of Kootenai River white sturgeon, which was listed as an Endangered Species in 1994, has prompted a recovery team to assess the feasibility of various habitat enhancement scenarios to reestablish white sturgeon populations. As the first phase in this assessment, the U.S. Geological Survey collected stream channel cross-section and longitudinal data during 2002—03 at about 400 locations along the Kootenai River from Libby Dam near Libby, Montana, to where the river empties into Kootenay Lake near Creston, British Columbia, Canada. Survey control stations with a horizontal and vertical accuracy of less than 0.1 foot were established using a global positioning system (GPS) prior to collection of stream channel cross-section data along the Kootenai River. A total of 245 cross sections were surveyed. Six cross sections upstream from Kootenai Falls were surveyed using a total station where the river was too shallow or dangerous to navigate by vessel. The remaining 239 cross sections were surveyed by interfacing real-time GPS equipment with an echo sounder to obtain bathymetric data and with a laser range- finder to obtain streambank data. These data were merged, straightened, ordered, and reduced in size to be useful. Spacing between these cross sections ranged from about 600 feet in the valley flat near Deep Creek and Shorty Island and near bridges to as much as several miles in other areas. These stream channel cross sections will provide information that can be used to develop hydraulic flow models of the Kootenai River from Libby Dam, Montana, to Queens Bay on Kootenay Lake in British Columbia, Canada.

Montana;Idaho↗

USGS2014

Stream classification of the Apalachicola-Chattahoochee-Flint River System to support modeling of aquatic habitat response to climate change

A stream classification and associated datasets were developed for the Apalachicola-Chattahoochee-Flint River Basin to support biological modeling of species response to climate change in the southeastern United States. The U.S. Geological Survey and the Department of the Interior’s National Climate Change and Wildlife Science Center established the Southeast Regional Assessment Project (SERAP) which used downscaled general circulation models to develop landscape-scale assessments of climate change and subsequent effects on land cover, ecosystems, and priority species in the southeastern United States. The SERAP aquatic and hydrologic dynamics modeling efforts involve multiscale watershed hydrology, stream-temperature, and fish-occupancy models, which all are based on the same stream network. Models were developed for the Apalachicola-Chattahoochee-Flint River Basin and subbasins in Alabama, Florida, and Georgia, and for the Upper Roanoke River Basin in Virginia. The stream network was used as the spatial scheme through which information was shared across the various models within SERAP. Because these models operate at different scales, coordinated pair versions of the network were delineated, characterized, and parameterized for coarse- and fine-scale hydrologic and biologic modeling. The stream network used for the SERAP aquatic models was extracted from a 30-meter (m) scale digital elevation model (DEM) using standard topographic analysis of flow accumulation. At the finer scale, reaches were delineated to represent lengths of stream channel with fairly homogenous physical characteristics (mean reach length = 350 m). Every reach in the network is designated with geomorphic attributes including upstream drainage basin area, channel gradient, channel width, valley width, Strahler and Shreve stream order, stream power, and measures of stream confinement. The reach network was aggregated from tributary junction to tributary junction to define segments for the benefit of hydrological, soil erosion, and coarser ecological modeling. Reach attributes are summarized for each segment. In six subbasins segments are assigned additional attributes about barriers (usually impoundments) to fish migration and stream isolation. Segments in the six sub-basins are also attributed with percent urban area for the watershed upstream from the stream segment for each decade from 2010–2100 from models of urban growth. On a broader scale, for application in a coarse-scale species-response model, the stream-network information is aggregated and summarized by 256 drainage subbasins (Hydrologic Response Units) used for watershed hydrologic and stream-temperature models. A model of soil erodibility based on the Revised Universal Soil Loss Equation also was developed at this scale to parameterize a model to evaluate stream condition. The reach-scale network was classified using multivariate clustering based on modeled channel width, valley width, and mean reach gradient as variables. The resulting classification consists of a 6-cluster and a 12-cluster classification for every reach in the Apalachicola-Chattahoochee-Flint Basin. We present an example of the utility of the classification that was tested using the occurrence of two species of darters and two species of minnows in the Apalachicola-Chattahoochee-Flint River Basin, the blackbanded darter and Halloween darter, and the bluestripe shiner and blacktail shiner.

Alabama, Florida, Georgia, Virginia↗

USGS2005

Annual survival and site fidelity of northern pintails banded on the Yukon-Kuskokwim Delta, Alaska

We banded northern pintails (Anas acuta; n = 13,645) at a single site on the Yukon-Kuskokwim Delta (YKD), Alaska, USA, from 1990 to 2001. We used recaptures from our site in combination with hunter recoveries to model annual survival, recovery rates, and fidelity to our capture location. Most recoveries (>90%) occurred in the Pacific Flyway with 64% reported from California's Central Valley. Our top candidate models allowed survival to vary by sex but not by age or year. Estimated annual survival was 77.6% (95% CI: 73.9-81.0%) for males and 60.2% (95% CI: 53.2-67.0%) for females. Reporting rates varied by age, sex, and year; estimates for adult males exceeded those for adult females by 3.5 times. Within sexes, reporting rates of hatch-year pintails exceeded those of adults. Estimated recovery rates were considerably lower than those estimated during the 1950s-1970s for winter banded pintails (Hestbeck 1993b), but there were no differences in survival rates. This suggests that changes in harvest regulations may not have influenced annual survival in this population. The propensity of banded pintails to return to our capture site (fidelity rate) varied between sexes and was positively correlated with water conditions in prairie Canada. Our estimates of fidelity rates varied from 77.4% to 87.2% for males and 89.8% to 94.3% for females. Our fidelity estimates suggest that some level of subpopulation structuring may exist for northern pintails. Additionally, our estimates of fidelity support previous observations of northern pintails overflying poor wetland habitat conditions on the Canadian prairies.

Journal of Wildlife Management↗

USGS2022

Streambank and floodplain geomorphic change and contribution to watershed material budgets

Stream geomorphic change is highly spatially variable but critical to landform evolution, human infrastructure, habitat, and watershed pollutant transport. However, measurements and process models of streambank erosion and floodplain deposition and resulting sediment fluxes are currently insufficient to predict these rates in all perennial streams over large regions. Here we measured long-term lateral streambank and vertical floodplain change and sediment fluxes using dendrogeomorphology in streams around the U.S. Mid-Atlantic, and then statistically modeled and extrapolated these rates to all 74 133 perennial, nontidal streams in the region using watershed- and reach-scale predictors. Measured long-term rates of streambank erosion and floodplain deposition were highly spatially variable across the landscape from the mountains to the coast. Random Forest regression identified that geomorphic change and resulting fluxes of sediment and nutrients, for both streambank and floodplain, were most influenced by urban and agricultural land use and the drainage area of the upstream watershed. Modeled rates for headwater streams were net erosional whereas downstream reaches were on average net depositional, leading to regional cumulative sediment loads from streambank erosion (−5.1 Tg yr −1 ) being nearly balanced by floodplain deposition (+5.3 Tg yr −1 ). Geomorphic changes in stream valleys had substantial influence on watershed sediment, phosphorus, carbon, and nitrogen budgets in comparison to existing predictions of upland erosion and delivery to streams and of downstream sediment loading. The unprecedented scale of these novel findings provides important insights into the balance of erosion and deposition in streams within disturbed landscapes and the importance of geomorphic change to stream water quality and carbon sequestration, and provides vital understanding for targeting management actions to restore watersheds.

Chesapeake Bay watershed↗

USGS2026

Seasonal trophic dynamics drive growth potential and predation risk for reintroduced Chinook salmon in Shasta Reservoir

Reservoir ecosystems can significantly affect anadromous salmon populations reintroduced upstream of impassable high-head dams. In this study, we examine how a novel reservoir food web created by an impoundment can limit juvenile growth or survival through the seasonal production or access to food, promote competition for available resources, and affect risk of the food supply or predation mortality, all of which can be strongly influenced by the thermal regime. Shasta Reservoir, the largest impoundment in California’s Central Valley Project, presents opportunities and risks for winter-run Chinook salmon ( Oncorhynchus tshawytscha ), a federally endangered population targeted for reintroduction into the McCloud River, which flows into the reservoir. We integrated field sampling, stable isotope analysis, hydroacoustic surveys, and bioenergetics modeling to characterize Shasta Reservoir’s food web and evaluate seasonal growth potential and predation risk for juvenile salmon. Zooplankton, dominated by Daphnia , provided favorable foraging conditions in spring but declined sharply by late summer, coinciding with high consumption demand from abundant threadfin shad ( Dorosoma petenense ). Bioenergetics simulations indicated that fry that would ordinarily enter the reservoir in autumn would face poor growth opportunities. They would also be exposed to elevated predation risk driven by warm temperatures and high metabolic demand, particularly from piscivorous salmonids and Sacramento pikeminnow ( Ptychocheilus grandis ). Limited information on predator abundances precludes the ability to quantify total predation demand. Alternatively, juveniles entering the reservoir the following spring would encounter greater prey availability and reduced predation pressure. These findings highlight the strong influence of seasonal thermal structure and food web dynamics on reservoir constraints and underscore the need to incorporate the dynamics of key habitats into reintroduction management and decisions. Our framework provides a quantitative, mechanistically-based approach for evaluating the role of reservoirs in salmon reintroductions above high-head dams.

California↗

USGS2010

Landscape and vegetation effects on avian reproduction on bottomland forest restorations

Forest restoration has been undertaken on >200,000 ha of agricultural land in the Mississippi Alluvial Valley, USA, during the past few decades. Decisions on where and how to restore bottomland forests are complex and dependent upon landowner objectives, but for conservation of silvicolous (forest-dwelling) birds, ecologists have espoused restoration through planting a diverse mix of densely spaced seedlings that includes fast-growing species. Application of this planting strategy on agricultural tracts that are adjacent to extant forest or within landscapes that are predominately forested has been advocated to increase forest area and enhance forested landscapes, thereby benefiting area-sensitive, silvicolous birds. We measured support for these hypothesized benefits through assessments of densities of breeding birds and reproductive success of 9 species on 36 bottomland forest restoration sites. Densities of thamnic (shrub–scrub dwelling) and silvicolous birds, such as yellow-breasted chat ( Icteria virens ), indigo bunting ( Passerina cyanea ), and white-eyed vireo ( Vireo griseus ) were positively associated with 1) taller trees, 2) greater stem densities, and 3) a greater proportion of forest within the landscape, whereas densities of birds associated with grasslands, such as dickcissel ( Spiza americana ) and red-winged blackbird ( Agelaius phoeniceus ), were negatively associated with these variables. Vegetation structure, habitat edge, and temporal effects had greater influence on nest success than did landscape effects. Taller trees, increased density of woody stems, greater vegetation density, and more forest within the landscape were often associated with greater nest success. Nest success of grassland birds was positively related to distance from forest edge but, for thamnic birds, success was greater near edges. Moreover, nest success and estimated fecundity of thamnic species suggested their populations are self-sustaining on forest restoration sites, whereas these sites are likely population sinks for grassland and open-woodland species. We recommend restoration strategies that promote rapid development of dense forest stands within largely forested landscapes to recruit breeding populations of thamnic and silvicolous birds that have reproductive success sufficient to sustain their populations.

Mississippi Alluvial Valley↗

USGS2013

Groundwater and surface-water interaction within the upper Smith River Watershed, Montana 2006-2010

The 125-mile long Smith River, a tributary of the Missouri River, is highly valued as an agricultural resource and for its many recreational uses. During a drought starting in about 1999, streamflow was insufficient to meet all of the irrigation demands, much less maintain streamflow needed for boating and viable fish habitat. In 2006, the U.S. Geological Survey, in cooperation with the Meagher County Conservation District, initiated a multi-year hydrologic investigation of the Smith River watershed. This investigation was designed to increase understanding of the water resources of the upper Smith River watershed and develop a detailed description of groundwater and surface-water interactions. A combination of methods, including miscellaneous and continuous groundwater-level, stream-stage, water-temperature, and streamflow monitoring was used to assess the hydrologic system and the spatial and temporal variability of groundwater and surface-water interactions. Collectively, data are in agreement and show: (1) the hydraulic connectedness of groundwater and surface water, (2) the presence of both losing and gaining stream reaches, (3) dynamic changes in direction and magnitude of water flow between the stream and groundwater with time, (4) the effects of local flood irrigation on groundwater levels and gradients in the watershed, and (5) evidence and timing of irrigation return flows to area streams. Groundwater flow within the alluvium and older (Tertiary) basin-fill sediments generally followed land-surface topography from the uplands to the axis of alluvial valleys of the Smith River and its tributaries. Groundwater levels were typically highest in the monitoring wells located within and adjacent to streams in late spring or early summer, likely affected by recharge from snowmelt and local precipitation, leakage from losing streams and canals, and recharge from local flood irrigation. The effects of flood irrigation resulted in increased hydraulic gradients (increased groundwater levels relative to stream stage) or even reversed gradient direction at several monitoring sites coincident with the onset of nearby flood irrigation. Groundwater-level declines in mid-summer were due to groundwater withdrawals and reduced recharge from decreased precipitation, increased evapotranspiration, and reduced leakage in some area streams during periods of low flow. Groundwater levels typically rebounded in late summer, a result of decreased evapotranspiration, decreased groundwater use for irrigation, increased flow in losing streams, and the onset of late-season flood irrigation at some sites. The effect of groundwater and surface-water interactions is most apparent along the North and South Forks of the Smith River where the magnitude of streamflow losses and gains can be greater than the magnitude of flow within the stream. Net gains consistently occurred over the lower 15 miles of the South Fork Smith River. A monitoring site near the mouth of the South Fork Smith River gained (flow from the groundwater to the stream) during all seasons, with head gradients towards the stream. Two upstream sites on the South Fork Smith River exhibited variable conditions that ranged from gaining during the spring, losing (flowing from the stream to the groundwater) during most of the summer as groundwater levels declined, and then approached or returned to gaining conditions in late summer. Parts of the South Fork Smith River became dry during periods of losing conditions, thus classifying this tributary as intermittent. The North Fork Smith River is highly managed at times through reservoir releases. The North Fork Smith River was perennial throughout the study period although irrigation diversions removed a large percentage of streamflow at times and losing conditions persisted along a lower reach. The lowermost reach of the North Fork Smith River near its mouth transitioned from a losing reach to a gaining reach throughout the study period. Groundwater and surface-water interactions occur downstream from the confluence of the North and South Fork Smith Rivers, but are less discernible compared to the overall magnitude of the main-stem streamflow. The Smith River was perennial throughout the study. Monitoring sites along the Smith River generally displayed small head gradients between the stream and the groundwater, while one site consistently showed strongly gaining conditions. Synoptic streamflow measurements during periods of limited irrigation diversion in 2007 and 2008 consistently showed gains over the upper 41.4 river miles of the main stem Smith River where net gains ranged from 13.0 to 28.9 cubic feet per second. Continuous streamflow data indicated net groundwater discharge and small-scale tributary inflow contributions of around 25 cubic feet per second along the upper 10-mile reach of the Smith River for most of the 2010 record. A period of intense irrigation withdrawal during the last two weeks in May was followed by a period (early June 2010 to mid-July 2010) with the largest net increase (an average of 71.1 cubic feet per second) in streamflow along this reach of the Smith River. This observation is likely due to increased groundwater discharge to the Smith River resulting from irrigation return flow. By late July, the apparent effects of return flows receded, and the net increase in streamflow returned to about 25 cubic feet per second. Two-dimensional heat and solute transport VS2DH models representing selected stream cross sections were used to constrain the hydraulic properties of the Quaternary alluvium and estimate temporal water-flux values through model boundaries. Hydraulic conductivity of the Quaternary alluvium of the modeled sections ranged from 3x10-6 to 4x10-5 feet per second. The models showed reasonable approximations of the streambed and shallow aquifer environment, and the dynamic changes in water flux between the stream and the groundwater through different model boundaries.

Montana↗

USGS2019

Migratory connectivity of American woodcock derived using satellite telemetry

American woodcock ( Scolopax minor ; woodcock) migratory connectivity (i.e., association between breeding and wintering areas) is largely unknown, even though current woodcock management is predicated on such associations. Woodcock are currently managed in the Eastern and Central management regions in the United States with the boundary between management regions analogous to the boundary between the Atlantic and Mississippi flyways, based largely on analysis of band returns from hunters. Factors during migration influence survival and fitness, and existing data derived from banding and very high frequency telemetry provide only coarse-scale information to assess factors influencing woodcock migratory movement patterns and behavior. To assess whether current management-region boundaries correspond with woodcock migratory connectivity in the Central Management Region and to describe migration patterns with higher resolution than has been previously possible, we deployed satellite transmitters on 73 woodcock (25 adult and 28 juvenile females, and 8 adult and 12 juvenile males) and recorded 87 autumn or spring migration paths from 2014 to 2016. Marked woodcock used 2 primary migrations routes: a Western Route and a Central Route. The Western Route ran north-south, connecting the breeding and wintering grounds within the Central Management Region. The hourglass-shaped Central Route connected an area on the wintering grounds reaching from Texas to Florida, to sites throughout northeastern North America in both the Eastern Management Region and Central Management Region and woodcock following this route migrated through the area between the Appalachian Mountains and the Mississippi Alluvial Valley in western Tennessee during autumn and spring. Two of 17 woodcock captured associated with breeding areas in Michigan, Wisconsin, or Minnesota migrated to wintering sites in the Eastern Management Region and 12 marked woodcock captured on wintering areas in Texas and Louisiana migrated to breeding sites in the Eastern Management Region. Woodcock that used the Western Route exhibited high concentrations of stopovers during spring in the Arkansas Ozark Mountains and northern Missouri, and along the Mississippi River on the border between Wisconsin and Minnesota, and autumn concentrations of stopovers in southwestern Iowa, central Missouri, the Arkansas portion of the Ozark Mountains, and around the junction of Texas, Louisiana, Oklahoma, and Arkansas. Woodcock that used the Central Route exhibited high concentrations of stopovers during spring in northern Mississippi through western Tennessee, western Kentucky, and the Missouri Bootheel, and autumn concentrations of stopovers in northern Illinois, southwestern Ohio, and the portions of Kentucky and Tennessee west of the Appalachian Mountains. We suggest that current management of woodcock based on 2 management regions may not be consistent with the apparent lack of strong migratory connectivity we observed. Our results also suggest where management of migration habitat might be most beneficial to woodcock.

Journal of Wildlife Management↗

USGS2020

Linking nest microhabitat selection to nest survival within declining pheasant populations in the Central Valley of California

Context: The ring-necked pheasant ( Phasianus colchicus ) has experienced considerable population declines in recent decades, especially in agricultural environments of the Central Valley of California. Although large-scale changes in land cover have been reported as an important driver of population dynamics, the effects of microhabitat conditions on specific demographic rates (e.g. nesting) are largely unknown. Aims: Our goal was to identify the key microhabitat factors that contribute to wild pheasant fitness by linking individual-level selection of each microhabitat characteristic to the survival of their nests within the California Central Valley. Methods: We radio- or GPS-marked 190 female ring-necked pheasants within five study areas and measured nest-site characteristics and nest fates during 2013–2017. Specifically, we modeled microhabitat selection using vegetation covariates measured at nest sites and random sites and then modeled nest survival as a function of selecting each microhabitat characteristic. Key results: Female pheasants tended to select nest sites with greater proportions of herbaceous cover and avoided areas with greater proportions of bare-ground. Specifically, perennial grass cover was the most explanatory factor with regard to nest survival, but selection for increasing visual obstruction alone was not shown to have a significant effect on survival. Further, we found strong evidence that pheasants selecting sites with greater perennial grass height were more likely to have successful nests. Conclusions: Although pheasants will select many types of vegetation available as cover, our models provided evidence that perennial grasses are more beneficial than other cover types to pheasants selecting nesting sites. Implications: Focusing management actions on promoting perennial grass cover and increased heights at the microsite level, in lieu of other vegetative modifications, may provide improved quality of habitat for nesting pheasants and, perhaps, result in increased productivity. This is especially important if cover is limited during specific times of the nesting period. Understanding how microhabitat selection influences fitness can help land managers develop strategies to increase the sustainability of hunted populations of this popular game-bird species.

California↗

USGS1986

Molt chronology of northern pintails in California

Intensity and chronology of molt in 10 feather groups (head, neck, breast, belly, back, rump, side, scapular, tertial, and tail) were measured using percentages of developing feathers (pinfeathers) converted to molt scores (0-100) in samples plucked monthly from northern pintails ( Anas acuta ) collected by shooting from August through March 1980-82 in the Sacramento Valley, California. Data to supplement sample size of immatures were obtained from October 1982 through January 1983. Molt scores of the prealternate molt peaked (30-40% pinfeathers) in immature and adult females and adult males in October when nearly all feather groups were molting. The prealternate molt in immature males did not peak until November. Adult males nearly completed this molt by December; no new feather growth occurred after January. Immature males were still growing new neck, side, rump, scapular, and tertial feathers in December. Molt scores of the prebasic molt among adult and immature females peaked (30-40% new growth) in February in both years. The prealternate molt of breast and belly feathers (both sexes) peaked earlier (Sep) than molt of most other feathers (Oct). Increased molt scores in peak months were a function of a disproportionate increase of molt activity within each feather group and the number of feather groups with molt. Molt scores of the prebasic molt in adult females were less during December and January of the dry (1980-81) than the wet (1981-82) winter. Restriction or delay of molt may conserve energy or other nutrients during poor habitat conditions.

California↗

USGS2013

Coarse-scale movement patterns of a small-bodied fish inhabiting a desert stream

Located on the floor of Death Valley (CA, USA), Salt Creek harbors a single fish species, the Salt Creek pupfish, Cyprinodon salinus salinus, which has adapted to this extremely harsh environment. Salt Creek is fed by an underground spring and is comprised of numerous pools, runs, and marshes that exhibit substantial variability in temperature, salinity, and dissolved oxygen concentrations. In addition, the wetted area of Salt Creek is reduced throughout the summer months due to high rates of evaporation, with some reaches drying completely. Therefore, it seems logical that short- and long-term movement patterns may play an important role in Salt Creek pupfish population dynamics. The objective of this study was to describe coarse-scale movements of Salt Creek pupfish in Salt Creek during their breeding season from March to May. Sex ratios and length–frequency distributions varied spatially within Salt Creek, suggesting population segregation during the breeding season. Long-distance movements were generally rare, although two fish moved more than 1.2 km. Movement in upstream reaches was rare or absent, in contrast to the greater movement observed in downstream reaches (29% of recaptures). Temporal trends and demographic patterns in movement were not observed. Because the two most downstream habitats dry up in the summer, our results indicate that coarse-scale movements that re-populate downstream reaches likely occur during other times of year. Consequently, the importance of small- and large-scale movements is influenced by season. Further assessment of Salt Creek movement patterns conducted during other times of year may better illuminate long-distance movement patterns and source-sink dynamics.

California↗

USGS1993

Flow recommendations for maintaining riparian vegetation along the Upper Missouri River, Montana

Montana Power Company, Inc. (MPC) submitted a final license application to the Federal Energy Regulatory Commission (FERC) on November 30, 1992. In this application, MPC proposed a plan for the protection of fish, wildlife, habitat, and water-quality resources. One concern was maintenance of woody riparian vegetation along the Missouri River, especially along the Wild and Scenic reach of the river, where the riparian forest occurs in relatively small discontinuous stands. The objectives of this project were 1) to recommend flows that would protect and enhance riparian forests along the Missouri River, and 2) to develop elements of an environmental monitoring program that could be used to assess the effectiveness of the recommended flows. Plains cottonwood ( Populus deltoides subsp. monilifera ) is the key structural component of riparian forests along the Missouri River. Therefore, we focused our analysis on factors affecting populations of this species. Previous work had demonstrated that the age structure of cottonwood populations is strongly influenced by aspects of flow that promote successfully establishment. In this study our approach was to determine the precise age of plains cottonwood trees growing along the Upper Missouri River and to relate years of establishment to the flow record. Our work was carried out between Coal Banks Landing and the Fred G. Robinson Bridge within the Wild and Scenic portion of the Missouri River. This segment of the river occupies a narrow valley and exhibits little channel migration. Maps and notes from the journals of Lewis and Clark (1804-1806) suggest that the present distribution and abundance of cottonwoods within the study reach is generally similar to presettlement conditions. Flows in the study reach are influenced by a number of dams and diversions, most importantly, Canyon Ferry and Tiber Dams. Although flow regulation has decreased peak flows and increased low flows, the gross seasonal pattern of flow has not been greatly altered. Most cottonwood establishment in our study reach occurred in years with a peak mean daily flow greater than 1,400 m 3 /s (49,434 cfs), or in the two years following such a flow. These years include 35 out of the 111 years of record, and account for establishment of 47 of 60 trees examined, a highly significant relationship. Infrequent establishment of cottonwood trees is not the result of scarcity of seed or seedlings. In the study reach seedlings become established most years on bare, relatively low surfaces deposited by the river. However, the high elevation of establishment of all trees dating to before 1978 indicates that only individuals established on high flood deposits are able to survive subsequent floods and ice jams. In order to maintain the present abundance of plains cottonwood in the study area we recommend flood flows in excess of 1,400 m 3 /s (49,434 cfs) measures as mean daily discharge at Fort Benton (U.S. Geological Survey gage 06090800) with a recurrence interval of approximately 9 years. Because cottonwood seeds remain viable for only a few weeks, and because seedling require a moist, bare surface, we further recommend maintenance of the historic timing of flooding with peak flood flows occurring between mid-May and late-June. Flow is not the only factor influencing cottonwood regeneration along this reach of the Missouri River. Land management, especially cattle grazing, is clearly having an impact, and changes in cottonwood populations could be expected if these practices were altered. However, the dependence of cottonwood establishment on high flow is clear in this reach in spite of the effects of other factors. Given the value of the resource, we strongly suggest establishment of a monitoring program to determine the effectiveness of the recommended flows and to provide the data necessary for refining them. We recommend a monitoring program that would include: 1) ten permanent, widely space channel cross sections for annual measurement of channel geometry and cottonwood establishment, growth, and survival; 2) five livestock enclosures to monitor the influence of grazing in the study area; and 3) low-elevation aerial photography of the reach every five years and after every flood to detect changes in channel geometry and forested area. Because cottonwood establishment is episodic, a long-term commitment to the monitoring effort is essential. In addition, cross sections and exclosures should be easy enough to access that measurements during flood years are possible.

Montana↗

USGS2018

The Introduced Argentine ant (Linepithema humile) on the California Channel Islands: Distribution and Patterns of Spread

The Argentine ant (Linepithema humile) is a widespread and abundant introduced species that disrupts ecosystems throughout its introduced range. This invader was inadvertently introduced to Santa Catalina, San Clemente, Santa Cruz, and San Nicolas Islands at various points during the past century but currently appears to be absent from the remaining Channel Islands. Multiple spatially disjunct infestations on each invaded island individually range in size from <500 m2 to >427 ha and encompass a variety of habitats, including large areas that are entirely dominated by native perennial vegetation. The existence of multiple infestations on individual islands suggests that inadvertent introduction by humans serves as an important within-island dispersal mechanism. Multiyear surveys of individual infestations on San Clemente Island and Santa Cruz Island reveal approximately radial patterns of expansion (as a result of colony budding) away from the edge of each infestation. Rates of spread by budding on San Clemente Island range from 10 m/year to 57 m/year and are comparable to those on mainland California. Given the documented effects of Argentine ant invasions on Santa Cruz Island, the continued spread of the Argentine ant on the Channel Islands represents a serious environmental concern. Eradication programs underway on San Clemente and Santa Cruz Islands will hopefully result in island-wide elimination of this detrimental invader. Native to southern South America (Wild 2004), the Argentine ant (Linepithema humile) has become an abundant and disruptive invader in many parts of its introduced range (Holway et al. 2002a). The Argentine ant was first found in California as early as 1905 (Smith 1936) and now widely occurs there, especially along the coast and in the Central Valley (Ward 1987, Holway 1995, Suarez et al. 1998). Areas invaded by L. humile in Califor- nia support few native ant species (Tremper 1976, Ward 1987, Human and Gordon 1996, Holway 1998a, 1998b, 2005, Suarez et al. 1998, Mitrovich et al. 2010, Hanna et al. 2015b). Additional impacts of this invasion include reduced prey availability for vertebrate insectivores, such as horned lizards (Suarez and Case 2002) and shrews (Laakkonen et al. 2001), and the disruption of seed dispersal (Bond and Slingsby 1984) and pollination mutualisms (Hanna et al. 2015b).

California↗

USGS2023

Flood-inundation maps for the Muddy River, near Moapa, Nevada

The Muddy River provides habitat for several wildlife and endemic aquatic species protected under the Endangered Species Act. Near Moapa, Nevada, in the Bureau of Land Management’s Muddy River Floodplain Restoration Project Area, a previously constructed levee on the east side of the river alters the natural hydrology and decreases connectivity between the river and its floodplain. The Bureau of Land Management is interested in restoring the project area to a more natural state and proposed removing the existing levee (at the time of this study in 2019) on the east bank of the river and replacing it with a new levee farther away from the river. The 50-, 20-, 10-, 4-, 2-, and 1-percent annual exceedance probability flood streamflows were estimated based on a flood-frequency analysis of a streamgage in the study area. River cross-sections were surveyed and combined with a digital elevation model of the floodplains to create a coupled one- and two-dimensional hydraulic model of the study area. The estimated flood streamflows were used as inputs in the hydraulic model to simulate how flood-inundation extents would change with the proposed restoration. Simulated inundation extents expand with increasing flood magnitudes, with nearly the entire valley inundated by the 2-percent flood streamflow. Within the project area, inundation extents with restoration increased on the east floodplain and decreased on the west floodplain for the 20-, 10-, 4-, 2-, and 1-percent flood streamflows. Outside the Muddy River Floodplain Restoration Project Area, inundation extents decreased with restoration east of the project area for the 20- and 10-percent flood streamflows, but changes in extent for larger streamflows were minor because most of the streamflow leaves the main river channel upstream of the restoration area.

Nevada↗

USGS2020

Spatial ecology and resource selection of eastern box turtles

Eastern box turtles ( Terrapene carolina carolina ) are widely distributed throughout the eastern United States. Although once common throughout much of its distribution, the species has experienced declines in local populations. Understanding resource selection is important for the conservation of this species; however, few data exist on resource selection for eastern box turtles in the southeastern United States. We estimated home range and resource selection for 100 individual turtles in the Blue Ridge, Ridge and Valley, and Cumberland Plateau and Mountains physiographic regions in Tennessee, USA, from 2016 to 2018. We used step‐selection functions to investigate eastern box turtle resource selection during May–August 2017 and May–August 2018 at 2 spatial scales. We classified vegetation type, measured vegetation composition and structure, recorded time since fire, and measured coarse woody debris abundance at 1,225 used telemetry locations and 1,225 associated available points. Home range sizes averaged 9.3 ha ± 3.0 (SE) using minimum convex polygon analysis, 8.25 ha ± 2.88 using 95% kernel density analysis, and 1.50 ha ± 0.56 using 50% kernel density analysis. Box turtles selected areas with greater visual obstruction at the 0–0.25‐m level, greater amounts of 10‐hour and 100‐hour fuels (timelag categories used in fire‐danger ratings), and greater litter depths compared to available locations. Box turtles were more likely to select areas with greater cover of brambles and coarser woody debris and were less likely to select areas with less vegetation cover. Vegetation type and time since last fire did not affect selection. Our data suggest that management activities that encourage greater understory vegetation cover, greater visual obstruction at the 0–0.25‐m level, and greater bramble cover will enhance habitat quality for eastern box turtles.

Journal of Wildlife Management↗

USGS2015

Effects of microhabitat and land use on stream salamander abundance in the southwest Virginia coalfields

Large-scale land uses such as residential wastewater discharge and coal mining practices, particularly surface coal extraction and associated valley fills, are of particular ecological concern in central Appalachia. Identification and quantification of both alterations across scales are a necessary first-step to mitigate negative consequences to biota. In central Appalachian headwater streams absent of fish, salamanders are the dominant, most abundant vertebrate predator providing a significant intermediate trophic role. Stream salamander species are considered to be sensitive to aquatic stressors and environmental alterations, and past research has shown linkages among microhabitat parameters, large-scale land use such as urbanization and logging with salamander abundances. However, little is known about these linkages in the coalfields of central Appalachia. In the summer of 2013, we visited 70 sites (sampled three times each) in the southwest Virginia coalfields to survey salamanders and quantify stream and riparian microhabitat parameters. Using an information-theoretic framework we compared the effects of microhabitat and large-scale land use on salamander abundances. Our findings indicate that dusky salamander (Desmognathus spp.) abundances are more correlated to microhabitat parameters such as canopy cover than to subwatershed land uses. Brook salamander (Eurycea spp.) abundances show strong negative associations to the suspended sediments and stream substrate embeddedness. Neither Desmognathus spp. nor Eurycea spp. abundances were influenced by water conductivity. These suggest protection or restoration of riparian habitats and erosion control is an important conservation component for maintaining stream salamanders in the mined landscapes of central Appalachia.

Virginia↗

USGS2014

Spatial patterns of lacustrine fish assemblages in a catchment of the Mississippi Alluvial Valley

In the alluvial valley of the lower Mississippi River, floodplain lakes form isolated aquatic fragments that retain differing degrees of connectivity to neighbouring rivers. Within these floodplain lakes it was hypothesized that fish species composition, relative abundance, and biodiversity metrics would be shaped largely by aquatic connectivity within a catchment. Fish assemblages in 13 floodplain lakes (five on-channel; eight off-channel) were assessed with electrofishing in 2006–2012 in the Bear Creek catchment, Mississippi, USA. Bear Creek spans approximately 80 km before draining into the Yazoo River, a tributary of the Mississippi River. Fish assemblages in on-channel and off-channel lakes were different, and fish assemblages in on-channel lakes were as a group more homogeneous than off-channel lakes. Moreover, a longitudinal gradient in fish assemblages occurred in on-channel lakes. The observed patterns in fish assemblages are linked largely to differing intensities in connectivity among lakes within the catchment. Lakes with irregular connections have greater individuality, whereas lakes with continuous or chronic connection are more similar. The wide variation in connectivity could be a key to the distinctive biodiversity of catchments and the focus of fish conservation programmes. Off-channel floodplain lakes are among the first landscape elements to vanish as a consequence of agricultural development. These habitats tend to accumulate sediments at fast rates and are converted to agricultural land as soon as suitable drainage can be attained. Considering that off-channel lakes with limited connectivity contribute greatly to the heterogeneity of fish assemblages, such losses pose great concerns to conservation of biodiversity.

Mississippi↗