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At least 487 records · Page 27Linked to original sources
USGS2000

Nearshore fish distributions in an Alaskan estuary in relation to stratification, temperature, and salinity

Fish were sampled with beach seines and small-meshed beam trawls in nearshore ( < 1 km) and shallow ( < 25 m) habitats on the southern coast of Kachemak Bay, Cook Inlet, Alaska, from June to August, 1996-1998. Fish distributions among habitats were analysed for species composition, catch-per-unit-effort (CPUE) and frequency of occurrence. Two oceanographically distinct areas of Kachemak Bay were sampled and compared: the Outer Bay and the Inner Bay. Outer Kachemak Bay is exposed and receives oceanic, upwelled water from the Gulf of Alaska, whereas the Inner Bay is more estuarine. Thermohaline properties of bottom water in the Outer and Inner Bay were essentially the same, whereas the Inner Bay water-column was stratified with warmer, less saline waters near the surface. Distribution and abundance of pelagic schooling fish corresponded with area differences in stratification, temperature and salinity. The Inner Bay supported more species and higher densities of schooling and demersal fish than the Outer Bay. Schooling fish communities sampled by beach seine differed between the Outer and Inner Bays. Juvenile and adult Pacific sand lance (Ammodytes hexapterus), Pacific herring (Clupea harengus pallasi), osmerids (Osmeridae) and sculpins (Cottidae) were all more abundant in the Inner Bay. Gadids (Gadidae) were the only schooling fish taxa more abundant in the Outer Bay. Thermohaline characteristics of bottom water were similar throughout Kachemak Bay. Correspondingly, bottom fish communities were similar in all areas. Relative abundances (CPUE) were not significantly different between areas for any of the five demersal fish groups: flatfishes (Pleuronectidae), ronquils (Bathymasteridae), sculpins (Cottidae), gadids (Gadidae) and pricklebacks (Stichaeidae).

Estuarine, Coastal and Shelf Science↗
USGS2017

Holocene paleoecology of an estuary on Santa Rosa Island, California

The middle to late Holocene history and early Anglo-European settlement impacts on Santa Rosa Island, California, were studied through the analysis of sediments in a small estuarine marsh. A 5.4-m-long sediment core produced a stratigraphic and pollen record spanning the last 5200 yr. Three major zones are distinguishable in the core. The lowermost zone (5200 to 3250 yr B.P.) represents a time of arid climate with predominantly marine sediment input and high Chenopodiaceae and Ambrosia pollen values. The intermediate zone (3250 yr B.P. to 1800 A.D.) is characterized by greater fresh water input and high values for Asteraceae and Cyperaceae pollen and charcoal particles. The uppermost zone (1800 A.D. to present) documents the unprecedented erosion, sedimentation, and vegetation change that resulted from the introduction of large exotic herbivores and exotic plants to the island during Anglo-European settlement. The identification of pollen grains of Torrey Pine (Pinus torreyana) documents the persistence of this endemic species on the island throughout the middle to late Holocene.

Quaternary Research↗
USGS2018

Measuring carbon and nitrogen bioassimilation, burial, and denitrification contributions of oyster reefs in Gulf coast estuaries

The eastern oyster ( Crassostrea virginica ) and the reefs they create provide significant ecosystem services. This study measured their possible role in nutrient mitigation through bioassimilation, burial, and oyster-mediated sediment denitrification in near-shore shallow water (< 1 m water depth) and deep-water (> 1 m water depth) oyster reefs in Louisiana. Nitrogen (N) and carbon (C) in shell and tissue differed by oyster reproductive status, size, and habitat type. Changes in tissue percent N and C post-spawning combined with significant reductions in tissue dry weight from the release of gametes, resulted in 20 and 46% reductions in tissue N and C load (mg), respectively, for a 100-mm oyster. Oyster reefs did not enhance burial rates, with burial range rates estimated at 1.4–2.6 g N m −2 year −1 , and 26.9–43.8 g C m −2 year −1 . Closed-system ex situ incubations indicated net denitrification in all habitat types studied, with the highest rates exceeding 600 µmol N m −2 h −1 during the summer, but no enhancement attributable to oyster reefs specifically. Within the highly productive, organic-rich wetland complex systems of coastal Louisiana, oyster reefs were not associated with enhanced denitrification, likely due to the organic-rich setting, and redundant supplies of organic nitrogen and carbon from adjacent marshes. Context remains critical in determining ecosystem provision of habitats, and efforts to extrapolate and predict nitrogen removal across locations necessitates consideration of local conditions. Considering the large extent of reefs and oyster production across coastal Louisiana, oyster habitats may still contribute to N and C mitigation, but their unique contribution likely comes from bioassimilation, and removal of the oysters from the system.

Louisiana↗
USGS2002

Birth of the modern Chesapeake Bay estuary between 7.4 and 8.2 ka and implications for global sea-level rise

Two major pulses of sea-level rise are thought to have taken place since the last glacial maximum — meltwater pulses (mwp) 1A (12 cal ka) and 1B (9.5 cal ka). Between mwp 1B and about 6 cal ka, many of the complex coastal ecosystems which ring the world’s oceans began to form. Here we report data for rhenium, carbon isotopes, total organic carbon, and fossil oysters from Chesapeake Bay which span the transition from fresh to brackish water conditions in the bay in the mid-Holocene. These data constrain sea-level change and resulting environmental change in the bay. They indicate that the transition was rapid, and that it was produced by (1) a third pulse of rapid eustatic sea-level rise, or (2) a geometry of the prehistoric Chesapeake Bay basin which predisposed it to a nonlinear response to a steadily rising sea level. Similar nonlinear changes in vulnerable coastal environments are likely to take place in the future due to polar warming, regardless of the timing or rate of sea-level rise.

Chesapeake Bay↗
USGS2015

Individual specialization in the foraging habits of female bottlenose dolphins living in a trophically diverse and habitat rich estuary

We examine individual specialization in foraging habits (foraging habitat and trophic level) of female bottlenose dolphins ( Tursiops truncatus ) resident in Sarasota Bay, Florida, USA, by analyzing time series of stable isotope (&delta; 15 N and &delta; 13 C) values in sequential growth layer groups within teeth. The isotope data provide a chronology of foraging habits over the lifetime of the individual and allowed us to show that female bottlenose dolphins exhibit a high degree of individual specialization in both foraging habitat and trophic level. The foraging habits used by adult females are similar to those they used as calves and may be passed down from mother to calf through social learning. We also characterized the foraging habits and home range of each individual by constructing standard ellipses from isotope values and dolphin sightings data (latitude and longitude), respectively. These data show that Sarasota Bay bottlenose dolphins forage within a subset of the habitats in which they are observed. Moreover, females with similar observational standard ellipses often possessed different foraging specializations. Female bottlenose dolphins may demonstrate individual specialization in foraging habits because it reduces some of the cost of living in groups, such as competition for prey.

Florida↗
USGS2024

Mercury concentrations in Seaside Sparrows and Marsh Rice Rats differ across the Mississippi River Estuary

Mercury (Hg) concentrations and their associated toxicological effects in terrestrial ecosystems of the Gulf of Mexico are largely unknown. Compounding this uncertainty, a large input of organic matter from the 2010 Deepwater Horizon oil spill may have altered Hg cycling and bioaccumulation dynamics. To test this idea, we quantified blood concentrations of total mercury (THg) in Seaside Sparrows ( Ammospiza maritima ) and Marsh Rice Rats ( Oryzomys palustris ) in marshes west and east of the Mississippi River in 2015 and 2016. We also tested for a difference in THg concentrations between oiled and non-oiled sites. To address the potential confounding effect of diet variation on Hg transfer, we used stable nitrogen (δ 15 N) and carbon (δ 13 C) isotope values as proxies of trophic position and the source of primary production, respectively. Our results revealed that five to six years after the spill, THg concentrations were not higher in sites oiled by the spill compared to non-oiled sites. In both species, THg was higher at sites east of the Mississippi River compared to control and oiled sites, located west. In Seaside Sparrows but not in Marsh Rice Rats, THg increased with δ 15 N values, suggesting Hg trophic biomagnification. Overall, even in sites with the most elevated THg, concentrations were generally low. In Seaside Sparrows, THg concentrations were also lower than previously reported in this and other closely related passerines, with only 7% of tested birds exceeding the lowest observed effect concentration associated with toxic effects across bird species (0.2 µg/g ww ) . The factors associated with geographic heterogeneity in Hg exposure remain uncertain. Clarification could inform risk assessment and future restoration and management actions in a region facing vast anthropogenic changes.

Ecotoxicology↗
USGS2020

Salinity and inundation effects on productivity of brackish tidal marsh plants in the San Francisco Bay-Delta Estuary

Plant productivity is central to numerous ecosystem functions in tidal wetlands. We examined how productivity of brackish marsh plants in northern California responded to abiotic stress gradients of inundation and salinity using two experimental approaches. In a greenhouse study with varying salinity, shoot production and biomass of Juncus balticus , Schoenoplectus acutus and S. americanus all declined monotonically with higher salinity, with evidence of differences in sensitivity among species by their varied functional responses. Salinity also negatively affected fecundity for the one species ( S. americanus ) that produced enough inflorescences during the experiment for analysis. In a field manipulation of inundation and initial pore water salinity, total end-of-season biomass and other metrics of growth in the high marsh species, J. balticus , had unimodal relationships with inundation. Root production tended to be greater strongly impacted by greater inundation than shoot production. The salinity treatment quickly dissipated for treatments that were flooded more frequently but persisted at a higher marsh elevation where it suppressed plant growth. These results suggest that both increased flooding and salinity associated with climate change and sea-level rise may negatively impact productivity of brackish marsh species, but with variable effects by species and stressor.

California↗
USGS1992

Bioaccumulation of hydrocarbons derived from terrestrial and anthropogenic sources in the Asian clam, Potamocorbula amurensis , in San Francisco Bay estuary

An assessment was made in Suisun Bay, California, of the distributions of hydrocarbons in estuarine bed and suspended sediments and in the recently introduced asian clam, Potamocorbula amurensis . Sediments and clams were contaminated with hydrocarbons derived from petrogenic and pyrogenic sources. Distributions of alkanes and of hopane and sterane biomarkers in sediments and clams were similar, indicating that petroleum hydrocarbons associated with sediments are bioavailable to Potamocorbula amurensis . Polycyclic aromatic hydrocarbons in the sediments and clams were derived mainly from combustion sources. Potamocorbula amurensis is therefore a useful bioindicator of hydrocarbon contamination, and may be used as a biomonitor of hydrocarbon pollution in San Francisco Bay.

California↗
USGS1988

The record of major quaternary sea-level changes in a large coastal plain estuary, Chesapeake Bay, Eastern United States

Seismic-reflection surveys of the Chesapeake Bay, combined with geologic mapping and analysis of boreholes on the Delmarva Peninsula, provide evidence of at least three generations of the Susquehanna River system and three generations of the Chesapeake Bay. The evidence for ancient courses of the Susquehanna River is preserved as three distinct paleochannels, and evidence for ancient versions of the Chesapeake Bay is preserved as three sets of paleochannel fill beneath the bay and three generations of barrier-spit deposits on the southern Delmarva Peninsula. The paleochannels represent relative sea-level minima and the channel-fill and barrier-spit deposits represents relative sea-level maxima. A history of three major marine transgressions is recorded in the stratigraphy preserved in the filled paleochannels and in the overlying barrier-spit complexes: three systematic progressions from fluvial to estuarine to bay or nearshore marine environments. This sea-level record seems to be compatible with the saw-toothed pattern of the marine oxygen-isotope record and with the concept of glacial-interglacial terminations. It also seems to have a climax character in which most of the preserved evidence is related to the largest terminations and to the extreme sea-level positions that bound those terminations. The three paleochannel-fill and barrier-spit complexes appear to correspond to oxygen-isotope stages 1,5, and either 7 or 11; the three related paleochannels correspond to stages 2, 6, and either 8 or 12.

Delaware, Maryland, Virginia↗
USGS1991

Remote estimation of the diffuse attenuation coefficient in a moderately turbid estuary

Solutions of the radiative transfer equation are used to derive relationships of water reflectance to the diffuse attenuation coefficient (K) in moderately turbid water (K > 0.5 m −1 ). Data sets collected from the NOAA AVHRR and in situ observations from five different dates confirm the appropriateness of these relationships, in particular the logistic equation. Values of K calculated from the reflectance data agree to within 60% of the observed values, although the reflectance derived using a more comprehensive aerosol correction is sensitive to chlorophyll concentrations greater than 50 μg L −1 . Agreement between in situ and remote observations improves as the time interval between samples is narrowed.

Remote Sensing of Environment↗
USGS1988

Nitrogen cycling between sediment and the shallow-water column in the transition zone of the Potomac River and estuary. I. Nitrate and ammonium fluxes

A three-year study of seasonal variation in water-column and sediment nitrogen species was conducted in the transition zone of the Potomac River 35 m from the Virginia shore at a site with an average water-column depth of approximately 1 m over sandy sediment. A diffusion-controlled sampler was used to collect water samples from the water column, at the interface between the water column and sediment, and at several tens of centimeters into the sediment. Nitrate was the predominant dissolved nitrogen species in the water column. The importance of denitrification was inferred by nitrate fluxes which were directed into the sediment from the water column during approximately 75% of the sampling periods and ranged from 0·02 to 0·69 mmol m −2 day −1 . Flux of nitrate from the sediment into the water column, ⩾0·1 mmol m −2 day −1 , due possibly to nitrification in surficial sediment, occurred during one spring and two summer sampling periods. Ammonium fluxes were less than 0·1 mmol m −2 day −1 during 90% of the sampling periods. Of the ammonium fluxes that were >0·05 mmol m −2 day −1 , all were fluxes into the sediment during sampling periods when sediment resuspension occurred, and all were into the water column during periods of calm. The mean value of ammonium flux (0·005 ± 0·05 mmol m −2 day −1 ) from the sandy, shallow-water sediments was two orders of magnitude less than the ammonium fluxes from the deeper, silty channel sediments in the same reach of the river. Diffusive flux calculations suggest that approximately one order of magnitude more nitrate than ammonium is cycled between the shallow-water column and the sandy sediment in the transition zone of the Potomac River.

Maryland, Virginia↗
USGS1989

Nitrogen cycling between sediment and the shallow-water column in the transition zone of the Potomac River and Estuary. II. The role of wind-driven resuspension and adsorbed ammonium

During periods of sediment resuspension, desorption of ammonium from sediment solids can be the major pathway for enriching the water column with the ammonium that is produced by bacterial degradation of organic matter in the bottom material. This hyopthesis is based on a three-year study of diffusive flux in the transition zone of the Potomac River at a site 35 m from the Virginia shore where the average water-column depth is approximately 1 m over sandy sediment. A diffusion-controlled sampler was used to collect water samples at the interface between the water column and sediment and at several tens of centimeters into the sediment. Interstitial water concentration gradients showed that diffusive flux of ammonium from the sandy shallow-water sediments was approximately 1% of the diffusive flux of ammonium from the silty channel sediments in the same zone of the Potomac River. Organic nitrogen and bound or adsorbed ammonium were the predominant nitrogen forms in the sediment. Adsorbed ammonium concentrations ranged from nondetectable to 3·7 μmol g −1 of sediment. Concentrations of adsorbed ammonium per gram of sediment were one to three orders of magnitude more than interstitial water ammonium concentrations. Desorption of ammonium from sediment solids appeared to be the controlling factor in the degree of water-column ammonium enrichment. In laboratory experiments that simulated sediment resuspension, 40–80% of the adsorbed ammonium predicted to desorb did so after approximately 30 min of mixing. Based on calculations for 1 m 2 to a depth of 4 cm, one resuspenion event lasting minutes could mix more ammonium into the water column from desorption of ammonium from sediment solids than could be delivered to the water column by diffusive flux from shallow-water sediments in 10–1000 days and would be comparable to enrichment by ammonium diffusive flux for 5–50 days from channel sediments in the same river zone.

Maryland, Virginia↗
USGS1978

Empirical model of Skeletonema costatum photosynthetic rate, with applications in the San Francisco Bay estuary

An empirical model of Skeletonema costatum photosynthetic rate is developed and fit to measurements of photosynthesis selected from the literature. Because the model acknowledges existence of: 1) a light-temperature interaction (by allowing optimum irradiance to vary with temperature), 2) light inhibition, 3) temperature inhibition, and 4) a salinity effect, it accurately estimates photosynthetic rates measured over a wide range of temperature, light intensity, and salinity. Integration of predicted instantaneous rate of photosynthesis with time and depth yields daily net carbon assimilation (pg C cell −1 day −1 ) in a mixed layer of specified depth, when salinity, temperature, daily irradiance and extinction coefficient are known. The assumption of constant carbon quota (pg C cell −1 ) allows for prediction of mean specific growth rate (day −1 ), which can be used in numerical models of Skeletonema costatum population dynamics. Application of the model to northern San Francisco Bay clearly demonstrates the limitation of growth by low light availability, and suggests that large population densities of S. costatum observed during summer months are not the result of active growth in the central deep channels (where growth rates are consistently predicted to be negative). But predicted growth rates in the lateral shallows are positive during summer and fall, thus offering a testable hypothesis that shoals are the only sites of active population growth by S. costatum (and perhaps other neritic diatoms) in the northern reach of San Francisco Bay.

California↗
USGS2019

Changes in hydrodynamics and wave energy as a result of seagrass decline along the shoreline of a microtidal back-barrier estuary

Seagrasses are marine flowering plants that provide key ecological services. In recent decades, multiple stressors have caused a worldwide decline in seagrass beds. Changes in bottom friction associated with seagrass loss are expected to influence the ability of estuarine systems to trap sediment inputs through local and regional changes in hydrodynamics. Herein, we conduct a numerical study using six historical maps of seagrass distribution in Barnegat Bay, USA, to demonstrate that reductions in seagrass coverage destabilize estuarine systems, decreasing their flood-dominance in the areas interested by seagrass disappearance and increasing bed-shear stress values across the entire back-barrier basin. Furthermore, we reveal how seagrass decline has considerably increased the impact of wind-waves on marsh edges between 1968 and 2009. From a comparison with a numerical experiment without submerged aquatic vegetation, we estimate that up to 40% of the computed wave thrust on marsh boundaries can be reduced by seagrass beds and we find that the location of a seagrass patch in addition to its aerial extent plays a crucial role in this attenuation process. This study highlights the benefits of seagrass meadows in enhancing estuarine resilience and reducing marsh-edge retreat by wind-wave attack, which is recognized as a chief agent in lateral marsh loss.

Advances in Water Resources↗
USGS2023

The influence of vegetated marshes on wave transformation in sheltered estuaries

Assessing the influence of marshes on mitigating flooding along estuarine shorelines under the pressures of sea level rise requires understanding wave transformation across the marsh. A numerical model was applied to investigate how vegetated marshes influence wave transformation. XBeach non-hydrostatic (XB-NH) was calibrated and validated with high frequency pressure data from the marsh at China Camp State Park in San Pablo Bay, California (USA). The model was used to examine how marsh and hydrodynamic characteristics change the potential for marshes to mitigate wave driven flooding. Model results demonstrate that hydrodynamics, vegetation, and marsh width influence wave transformation most, while marsh morphology parameters such as elevation and slope had least effect. Results suggest that in the range of settings explored here (incident wave heights ranging from 0.5 to 3 m and water levels ranging from current mean higher high water to 3 m above current mean higher high water), in comparison to wave propagation over an unvegetated mudflat, marsh vegetation reduces runup by a median of 40 cm and wave height by a median of 35 cm. Results illustrate how marshes can be strategically utilized to provide flood reduction benefits.

Coastal Engineering↗
USGS2007

Modeling the influence of river discharge on salt intrusion and residual circulation in Danshuei River estuary, Taiwan

A 3-D, time-dependent, baroclinic, hydrodynamic and salinity model was implemented and applied to the Danshuei River estuarine system and the adjacent coastal sea in Taiwan. The model forcing functions consist of tidal elevations along the open boundaries and freshwater inflows from the main stream and major tributaries in the Danshuei River estuarine system. The bottom friction coefficient was adjusted to achieve model calibration and verification in model simulations of barotropic and baroclinic flows. The turbulent diffusivities were ascertained through comparison of simulated salinity time series with observations. The model simulation results are in qualitative agreement with the available field data.

Continental Shelf Research↗
USGS2012

Over 100 years of environmental change recorded by foraminifers and sediments in a large Gulf of Mexico estuary, Mobile Bay, AL, USA

The marine microfauna of Mobile Bay has been profoundly influenced by the development and expansion of the primary shipping channel over the last ∼100 years. Foraminifers and sediments from seven box cores with excess lead-210 chronology document that channel dredging and spoil disposal have altered circulation, reduced estuarine mixing, changed sedimentation patterns, and caused a faunal turnover within the bay. Beginning in the late 1800s, changes in estuarine mixing allowed for greater low-pH freshwater influence in the bay, and ultimately began environmental changes that resulted in the loss of calcareous foraminifers. By the early 1900s, box cores throughout Mobile Bay record a ∼100-year trend of increasing calcareous test dissolution that continues to the present. Since the completion of the current shipping channel in the 1950s, restricted tidal flushing and increased terrestrial organic matter, documented by carbon-to-nitrogen ratios, stimulated an increase in agglutinated foraminiferal densities. However, in deeper areas of the bay, hypoxic water has negatively impacted the marine microfauna. Comparisons of the present-day foraminiferal assemblage with foraminifers collected in the early 1970s indicate that the continued biologic loss of calcareous foraminifers in the bay has allowed the introduction of a new agglutinated foraminiferal species into the bay.

Alabama↗