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Results for “Biofouling”

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USGS2019

Kinetic study on clogging of a geothermal pumping well triggered by mixing-induced biogeochemical reactions

The sustainability of ground-source geothermal systems can be severely impacted by microbially mediated clogging processes. Biofouling of water wells by hydrous ferric oxide is a widespread problem. Although the mechanisms and critical environmental factors associated with clogging development are widely recognized, effects of mixing processes within the wells and time scales for clogging processes are not well characterized. Here we report insights from a joint hydrological, geochemical, and metagenomics characterization of a geothermal doublet in which hydrous ferric oxide and hydrous manganese oxide deposits had formed as a consequence of mixing shallow groundwater containing dissolved oxygen and nitrate with deeper, anoxic groundwater containing dissolved iron (Fe II ) and manganese (Mn II ). Metagenomics identify distinct bacteria consortia in the pumping well oxic and anoxic zones, including autotrophic iron-oxidizing bacteria. Batch mixing experiments and geochemical kinetics modeling of the associated reactions indicate that Fe II and Mn II oxidation are slow compared to the residence time of water in the pumping well; however, adsorption of Fe II and Mn II by accumulated hydrous ferric oxide and hydrous manganese oxide in the well bore and pump riser provides “infinite” time for surface-catalyzed oxidation and a convenient source of energy for iron-oxidizing bacteria, which colonize the surfaces and also catalyze oxidation. Thus, rapid clogging is caused by mixing-induced redox reactions and is exacerbated by microbial activity on accumulated hydrous oxide surfaces.

Orleans↗

USGS1994

Instrument packages to study long-term sediment transport processes in a shallow bay

Pressure and near-surface and near-bottom measurements of current, temperature, salinity and light transmission were required in Mobile Bay, a 3 m deep estuary on the Gulf of Mexico. This environment presented several obstacles to obtaining long term observations. Boat traffic, soft estuary bottom, heavy biofouling, rapid sample rates and large data storage were overcome by using instrumentation techniques that are applicable to other estuary systems. Nearly two years of continuous data was collected.

Conference Paper↗

USGS2005

Localized sulfate-reducing zones in a coastal plain aquifer

High concentrations of dissolved iron in ground water of coastal plain or alluvial aquifers contribute to the biofouling of public supply wells for which treatment and remediation is costly. Many of these aquifers, however, contain zones in which microbial sulfate reduction and the associated precipitation of iron-sulfide minerals decreases iron mobility. The principal water- bearing aquifer (Magothy Aquifer of Cretaceous age) hi Suffolk County, New York, contains localized sulfate-redudng zones hi and near lignite deposits, which generally are associated with clay lenses. Microbial analyses of core samples amended with [ 14 C]-acetate indicate that microbial sulfate reduction is the predominant terminal-electron-accepting process (TEAP) in poorly permeable, lignite-rich sediments at shallow depths and near the ground water divide. The sulfate-reducing zones are characterized by abundant lignite and iron-sulfide minerals, low concentrations of Fe(III) oxyhydroxides, and by proximity to clay lenses that contain pore water with relatively high concentrations of sulfate and dissolved organic carbon. The low permeability of these zones and, hence, the long residence time of ground water within them, permit the preservation and (or) allow the formation of iron-sulfide minerals, including pyrite and marcasite. Both sulfate-reducing bacteria (SRB) and iron-reducing bacteria (IRB) are present beneath and beyond the shallow sulfate-reducing zones. A unique Fe(HI)-reducing organism, MD-612, was found in core sediments from a depth of 187 m near the southern shore of Long Island. The distribution of poorly permeable, lignite-rich, sulfate-reducing zones with decreased iron concentration is varied within the principal aquifer and accounts for the observed distribution of dissolved sulfate, iron, and iron suit Ides in the aquifer. Locating such zones for the placement of production wells would be difficult, however, because these zones are of limited aerial extent.

Ground Water↗

USGS1999

Co-existence of zebra mussels and freshwater unionids: Population dynamics of Leptodea fragilis in a coastal wetland infested with zebra mussels

In 1996, thousands of live Leptodea fragilis were collected from a marsh located in the western basin of Lake Erie that was infested with zebra mussels ( Dreissena polymorpha ). Despite the presence of zebra mussels at this site for a number of years, this L. fragilis population showed no signs of competition-induced changes in population dynamics. Biofouling was limited: fewer than 1% of the L. fragilis showed evidence of recent or past zebra mussel colonization. Successful recruitment occurred yearly, with multiple year classes collected that ranged in age from 1 to 12 years. However, age and shell length were not well correlated. Seventy-one percent of the individuals collected were 51-80 mm long, but ranged in age from 2 to 4.5 years. Three different patterns of growth or shell deposition were found. Some individuals grew rapidly, reaching 105 mm in 3.5 years, while others grew only 4.5 mm over the same time period. A few grew poorly during some years but very rapidly in others. Individuals with a shell length of 41 mm or more were sexually mature and females were more common than males. The strong recruitment and steady growth of this population showed no change between the years before and after the zebra mussel invasion, indicating that this marsh is functioning as a natural refugium from potential problems caused by zebra mussels.

Canadian Journal of Zoology↗

USGS1982

Gasometer: An inexpensive device for continuous monitoring of dissolved gases and supersaturation

The “gasometer” is a device that measures differential dissolved-gas pressures (δP) in water relative to barometric pressure (as does the “Weiss saturometer”), but operates continuously without human attention. The gasometer can be plumbed into a water-supply system and requires 8 liters/minute of water or more at 60 kilopascals. The gasometer's surfaces are nontoxic, and flow-through water can be used for fish culture. The gasometer may be connected to a small submersible pump and operated as a portable unit. The gasometer can activate an alarm system and thus protect fish from hyperbaric (supersaturation) or hypobaric gas pressures (usually due to low dissolved oxygen). Instructions are included for calculating and reporting data including the pressure and saturation of individual gases. Construction and performance standards are given for the gasometer. Occasional cleaning is required to remove biofouling from the gas-permeable tubing. PDF

Transactions of the American Fisheries Society↗

USGS2017

Evaluation of the Hydrolab HL4 water-quality sonde and sensors

The U.S. Geological Survey (USGS) Hydrologic Instrumentation Facility evaluated three Hydrolab HL4 multiparameter water-quality sondes by OTT Hydromet. The sondes were equipped with temperature, conductivity, pH, dissolved oxygen (DO), and turbidity sensors. The sensors were evaluated for compliance with the USGS National Field Manual for the Collection of Water-Quality Data (NFM) criteria for continuous water-quality monitors and to verify the validity of the manufacturer’s technical specifications. The conductivity sensors were evaluated for the accuracy of the specific conductance (SC) values (conductance at 25 degrees Celsius [ o C]), that were calculated by using the vendor default method, Hydrolab Fresh. The HL4’s communication protocols and operating temperature range along with accuracy of the water-quality sensors were tested in a controlled laboratory setting May 1–19, 2016. To evaluate the sonde’s performance in a surface-water field application, an HL4 equipped with temperature, conductivity, pH, DO, and turbidity sensors was deployed June 20–July 22, 2016, at USGS water-monitoring site 02492620, Pearl River at National Space Technology Laboratories (NSTL) Station, Mississippi, located near Bay Saint Louis, Mississippi, and compared to the adjacent well-maintained EXO2 site sonde. The three HL4 sondes met the USGS temperature testing criteria and the manufacturer’s technical specifications for temperature based upon the median room temperature difference between the measured and standard temperatures, but two of the three sondes exceeded the allowable difference criteria at the temperature extremes of approximately 5 and 40 ºC. Two sondes met the USGS criteria for SC. One of the sondes failed the criteria for SC when evaluated in a 100,000-microsiemens-per-centimeter (μS/cm) standard at room temperature, and also failed in a 10,000-μS/cm standard at 5, 15, and 40 ºC. All three sondes met the USGS criteria for pH and DO at room temperature, but one sonde exceeded the allowable difference criteria when tested in pH 5.00 buffer and at 40 ºC. The USGS criteria and the technical specifications for turbidity were met by one sonde in standards ranging from 10 to 3,000 nephelometric turbidity units (NTU). A second sonde met the USGS criteria and the technical specifications except in the 3,000-NTU standard, and the third sonde exceeded the USGS calibration criteria in the 10- and 20-NTU standards and the technical specifications in the 20-NTU standard. Results of the field test showed acceptable performance and revealed that differences in data sample processing between sonde manufacturers may result in variances between the reported measurements when comparing one sonde to another. These variances in data would be more pronounced in dynamic site conditions. The lack of a wiper or other sensor-cleaning device on the DO sensor could prove problematic, and could limit the use of the HL4 to profiling applications or at sites with limited biofouling.

Open-File Report↗

USGS2007

Geochemical effects of induced stream-water and artificial recharge on the Equus Beds Aquifer, South-Central Kansas, 1995-2004

Artificial recharge of the Equus Beds aquifer is part of a strategy implemented by the city of Wichita, Kansas, to preserve future water supply and address declining water levels in the aquifer of as much as 30 feet caused by withdrawals for water supply and irrigation since the 1940s. Water-level declines represent a diminished water supply and also may accelerate migration of saltwater from the Burrton oil field to the northwest and the Arkansas River to the southwest into the freshwater of the Equus Beds aquifer. Artificial recharge, as a part of the Equus Beds Ground-Water Recharge Project, involves capturing flows larger than base flow from the Little Arkansas River and recharging the water to the Equus Beds aquifer by means of infiltration or injection. The geochemical effects on the Equus Beds aquifer of induced stream-water and artificial recharge at the Halstead and Sedgwick sites were determined through collection and analysis of hydrologic and water-quality data and the application of statistical, mixing, flow and solute-transport, and geochemical model simulations. Chloride and atrazine concentrations in the Little Arkansas River and arsenic concentrations in ground water at the Halstead recharge site frequently exceeded regulatory criteria. During 30 percent of the time from 1999 through 2004, continuous estimated chloride concentrations in the Little Arkansas River at Highway 50 near Halstead exceeded the Secondary Drinking-Water Regulation of 250 milligrams per liter established by the U.S. Environmental Protection Agency. Chloride concentrations in shallow monitoring wells located adjacent to the stream exceeded the drinking-water criterion five times from 1995 through 2004. Atrazine concentrations in water sampled from the Little Arkansas River had large variability and were at or near the drinking-water Maximum Contaminant Level of 3.0 micrograms per liter as an annual average established by the U.S. Environmental Protection Agency. Atrazine concentrations were much smaller than the drinking-water criterion and were detected at much smaller concentrations in shallow monitoring wells and diversion well water located adjacent to the stream probably because of sorption on aquifer sediment. Before and after artificial recharge, large, naturally occurring arsenic concentrations in the recharge water for the Halstead diversion well and recharge site exceeded the Maximum Contaminant Level of 10 micrograms per liter established by the U.S. Environmental Protection Agency for drinking water. Arsenic and iron concentrations decreased when water was recharged through recharge basins or a trench; however, chemical precipitation and potential biofouling eventually may decrease the artificial recharge efficiency through basins and trenches. At the Sedgwick site, chloride concentrations infrequently exceeded regulatory criteria. Large concentrations of atrazine were treated to decrease concentrations to less than regulatory criteria. Recharge of treated stream water through recharge basins avoids potentially large concentrations of arsenic and iron that exist at the Halstead diversion site. Results from a simple mixing model using chloride as a tracer indicated that the water chemistry in shallow monitoring well located adjacent to the Little Arkansas River was 80 percent of stream water, demonstrating effective recharge of the alluvial aquifer by the stream. Results also indicated that about 25 percent of the water chemistry of the diversion well water was from the shallow part of the aquifer. Additionally, diverting water through a diversion well located adjacent to the stream removed about 75 percent of the atrazine, probably through sorption to aquifer sediment, and decreased the need for additional water treatment to remove atrazine.

Kansas↗

USGS2020

Distribution of selected hydrogeologic characteristics of the upper glacial and Magothy aquifers, Long Island, New York

The Pleistocene- and Cretaceous-age sediments underlying Long Island, New York, compose an important sole-source aquifer system that is nearly 2,000 feet thick in some areas. Sediment characteristics of importance for water supply include water-transmitting properties—horizontal and vertical hydraulic conductivity—and the distribution of lignite, which provides an important control on oxygen-reduction (redox) conditions and water quality, in Cretaceous-age aquifers. Several decades of urbanization and the associated need to meet water demand have generated abundant data on the lithology of the aquifer sediments and the potential for an improved regional-scale understanding of this aquifer system. There is a range in the source and quality of the information, but large amounts of data, even of lesser quality, can yield insight into important aquifer characteristics. The distribution of the horizontal and vertical hydraulic conductivity and the probability of occurrence of lignite and clay in the aquifer were developed for this study from a database of drilling records and geophysical logs. Lithologic descriptions were categorized into a set of standardized codes, which in turn, were aggregated into a set of general codes for the Pleistocene-age upper glacial and Cretaceous-age Magothy aquifers. General values of hydraulic conductivity were assigned to each code from published estimates on Long Island and analogous hydrogeologic environments on Cape Cod, Massachusetts. A binary value of 1 or 0 was assigned to each coded interval to indicate the presence or absence of lignite or based on keywords in the lithologic descriptions. This information was assembled into a geographic information system database that was queried sequentially and used to develop gridded values of each aquifer characteristic by use of ordinary kriging for a set of grids, each representing 10-foot-thick planar slices for the entire vertical thickness of each aquifer. These sets of grids, taken as a whole, represent a quasi-three-dimensional representation of each aquifer characteristic in both the upper glacial and Magothy aquifers. The analysis of hydraulic conductivity shows patterns that generally reflect known depositional features of each unit and are consistent with the current understanding of the geology of the aquifers. Spatial patterns in the upper glacial aquifer show contrasts in estimated hydraulic conductivity: lower values occur in inland areas and likely are associated with glacial moraines; higher values generally occur to the south in association with glacial outwash. Higher values of hydraulic conductivity in the Magothy aquifer, which resulted from deltaic deposition, generally occur in the basal parts of the unit, are associated with channel-lag deposits and are found in parts of the aquifer known for large well yields. Lower values of hydraulic conductivity generally occur in middle parts of the aquifer associated with deposition in overbank and wetland environments. The probability of lignite occurrence is highest in this same vertical zone of the Magothy aquifer, consistent with deposition in wetland environments. The probability of lignite occurrence generally is highest along the southern shore of the island. Lignite occurrence generally is consistent with water-quality patterns; water quality in these same areas indicate chemically reducing conditions and redox-related iron biofouling commonly occurs.

New York↗

USGS2020

Compositional analysis of formation water geochemistry and microbiology of commercial and carbon dioxide-rich wells in the southwestern United States

Studies of naturally occurring subsurface carbon dioxide (CO 2 ) accumulations can provide useful information for potential CO 2 injection projects; however, the microbial communities and formation water geochemistry of most reservoirs are understudied. Formation water and microbial biomass were sampled at four CO 2 -rich reservoir sites: two within Bravo Dome, a commercial CO 2 field in New Mexico; one northwest of Bravo Dome in Colorado (Oakdale Field); and one southwest of Bravo Dome in New Mexico (Rafter “K” Ranch). Aside from the Rafter “K” Ranch site, minor differences were observed in the geochemistry of formation water collected from these sites compared to historical data. No organisms were significantly associated with Oakdale Field compared to the other three sites, nor were any hydrogeochemical or gas geochemical parameters (for example, CO 2 concentration) found to have significant associations with the microbial ecology of these four sites. Microorganisms from these sites were metabolically diverse and had the potential to (1) generate methane, (2) produce corrosive hydrogen sulfide (H 2 S), and (3) rapidly biofoul and (or) clog pore spaces by shifting microbial communities with changes in salinity or nutrient supply. This study demonstrates that high concentrations of CO 2 in subsurface reservoirs apparently have not imparted a distinct geochemical or microbiological signature on the associated formation waters and that the microorganisms in these reservoirs are metabolically diverse and could adapt to geochemical changes in the subsurface.

Colorado, New Mexico, Texas, Oklahoma↗

USGS2016

Sediment acoustic index method for computing continuous suspended-sediment concentrations

Suspended-sediment characteristics can be computed using acoustic indices derived from acoustic Doppler velocity meter (ADVM) backscatter data. The sediment acoustic index method applied in these types of studies can be used to more accurately and cost-effectively provide time-series estimates of suspended-sediment concentration and load, which is essential for informed solutions to many sediment-related environmental, engineering, and agricultural concerns. Advantages of this approach over other sediment surrogate methods include: (1) better representation of cross-sectional conditions from large measurement volumes, compared to other surrogate instruments that measure data at a single point; (2) high temporal resolution of collected data; (3) data integrity when biofouling is present; and (4) less rating curve hysteresis compared to streamflow as a surrogate. An additional advantage of this technique is the potential expansion of monitoring suspended-sediment concentrations at sites with existing ADVMs used in streamflow velocity monitoring. This report provides much-needed standard techniques for sediment acoustic index methods to help ensure accurate and comparable documented results. A sediment acoustic index gage is used to collect continuous acoustic backscatter data, using an ADVM deployed in a fixed location, which are related to results from discrete suspended-sediment samples. The raw ADVM backscatter data are adjusted for variables affecting backscatter other than the sediment concentration to compute the sediment-corrected backscatter ( SCB ) and sediment attenuation coefficient ( SAC ). The sediment acoustic index rating (rating) is then developed by relating the sediment characteristics from the periodic samples to the SCB and (or) SAC and other explanatory variables in a site-specific, instrument-specific, simple or multiple linear regression model. The rating is reviewed and checked to ensure the technique has been applied appropriately. This review includes an assessment of the theoretical soundness, the adequacy of the model calibration dataset, and the quality of the regression model and regression diagnostics. The rating can then be applied to the acoustic surrogates and other explanatory variables to obtain continuous records of computed suspended-sediment concentration. The estimates of suspended-sediment concentration can then be paired with streamflow data, if available, to compute continuous records of suspended-sediment load. Once developed, sediment acoustic index ratings must be validated with additional suspended-sediment samples, beyond the period of record used in the rating development, to verify that the regression model continues to adequately represent sediment conditions within the stream. Changes in ADVM configuration or installation, or replacement with another ADVM, may require development of a new rating. The best practices described in this report can be used to develop continuous estimates of suspended-sediment concentration and load using sediment acoustic surrogates to enable more informed and accurate responses to diverse sedimentation issues.

Techniques and Methods↗

USGS2002

Aquifer geochemistry and effects of pumping on ground-water quality at the Green Belt Parkway Well Field, Holbrook, Long Island, New York

Geochemistry, microbiology, and water quality of the Magothy aquifer at a new supply well in Holbrook were studied to help identify factors that contribute to iron-related biofouling of public-supply wells. The organic carbon content of borehole sediments from the screen zone, and the dominant terminal electron-accepting processes (TEAPs), varied by depth. TEAP assays of core sediments indicated that iron reduction, sulfate reduction, and undetermined (possibly oxic) reactions and microbial activity are correlated with organic carbon (lignite) content. The quality of water from this well, therefore, reflects the wide range of aquifer microenvironments at this site. High concentrations of dissolved iron (3.6 to 6.4 micromoles per liter) in water samples from this well indicate that some water is derived from Fe(III)-reducing sediments within the aquifer, but traces of dissolved oxygen indicate inflow of shallow, oxygenated water from shallow units that overlie the local confining units. Water-quality monitoring before and during a 2-day pumping test indicates that continuous pumping from the Magothy aquifer at this site can induce downward flow of shallow, oxygenated water despite the locally confined conditions. Average concentrations of dissolved oxygen are high (5.2 milligrams per liter, or mg/L) in the overlying upper glacial aquifer and at the top of the Magothy aquifer (4.3 mg/L), and low ( < 0.1 mg/L) in the deeper, anaerobic part of the Magothy; average concentrations of phosphate are high (0.4 mg/L) in the upper glacial aquifer and lower (0.008 mg/L) at the top of the Magothy aquifer and in the deeper part of the Magothy (0.013 mg/L). Concentrations of both constituents increased during the 2 days of pumping. The δ 34 S of sulfate in shallow ground water from observation wells (3.8 to 6.4 per mil) was much heavier than that in the supplywell water (-0.1 per mil) and was used to help identify sources of water entering the supply well. The δ 34 S of sulfate in a deep observation well adjacent to the supply well increased from 2.4 per mil before pumping to 3.3 per mil after pumping; this confirms that the pumping induced downward migration of water. The lighter δ 34 S value in the pumped water than in the adjacent observation well probably indicates FeS 2 oxidation (which releases light δ 34 S in adjacent sediments) by the downward flow of oxygenated water.

New York↗

USGS2021

Use of carbon dioxide to prevent zebra mussel (Dreissena polymorpha) settlement and effects on native mussels (Order Unionoida) and benthic communities

We determined the efficacy of carbon dioxide (CO2) for preventing larval (veliger) settlement of the invasive zebra mussel (Dreissena polymorpha) and compared the response of native juvenile mussels and macroinvertebrate and periphyton communities to hypercapnia. A microcosm system of control (ambient Camb) and CO2 treatments [low PCO2 (Clow)=35,094 µatm, and high PCO2 (Chigh)=66,685 µatm)] was supplied with river water for 11 weeks. We measured zebra mussel settlement, juvenile native mussel (Lampsilis cardium and L. siliquoidea) growth and condition, and macroinvertebrate and periphyton community composition. Zebra mussels settled in all Camb tanks (n=4) from early July through August compared to one mussel in a CO2 treatment tank over the same period. Native mussel growth, tissue condition, and shell condition were reduced in CO2, particularly in the highest treatment. Benthic biomass (excluding zebra mussels) was similar in Camb and Clow but was reduced in Chigh. Macroinvertebrate community composition differed among treatments due to greater abundance of Chironomidae in Clow and Oligochaeata in Chigh. Periphyton abundance and richness increased in both CO2 treatments and was driven by increases in Cyanobacteria, Bacillariophyta and Chlorophyta. Our results indicate that efficacious levels of CO2 (~35,000 µatm PCO2) for reducing biofouling by dreissenids are tolerable to most freshwater benthic taxa. Chronic elevated CO2 infusion (>35,000 µatm PCO2) may reduce native mussel growth and condition and alter benthic invertebrate and periphyton community composition. Further refinement of CO2 application strategies is needed to determine minimal effective dose and duration to prevent dreissenid settlement and minimize effects on nontarget organisms.

Management of Biological Invasions↗

USGS2025

Identifying gaps in regulatory prevention measures for nonindigenous aquatic species in the United States

Nonindigenous aquatic species (NAS) present in trade can become costly invaders once introduced and established in a new environment. Preventing NAS introduction is considered the most effective strategy to avoid potential negative ecological, economic, and human health impacts associated with certain species. The United States government enacts regulatory prevention measures carried out by numerous federal agencies with designated authority over certain species, taxonomic groups, and pathways of introduction. We examined 18 case study species across eight taxonomic groups and eight pathways of introduction using a gap analysis approach to identify current gaps in regulatory prevention that may hinder the United States from achieving a more “ideal state” of management in which no NAS or pathways of introduction are unregulated. We found that outside of pathway regulations for ballast water and biofouling, the majority of amphibian, fish, reptile, crustacean, and mollusk species are subject to little to no regulation aside from a few specific species that are highly regulated. We also found large knowledge gaps surrounding the diversity of species and quantities of individual organisms introduced into the United States through the hitchhiking and cultural release pathways. We highlight that the current regulatory approach in the United States is a “blocklist” approach where a select list of species is disallowed as compared to an “allowlist” (approved list of species allowed only) or “conditional list” (between a “blocklist” and “allowlist”) used by Australia and New Zealand. Increased documentation of the diversity and quantities of NAS entering the United States and a better understanding of the contribution of the hitchhiking and cultural release pathways to NAS introductions could help inform regulatory prevention.

Management of Biological Invasions↗

USGS1998

Field results of antifouling techniques for optical instruments

An anti-fouling technique is developed for the protection of optical instruments from biofouling which leaches a bromide compound into a sample chamber and pumps new water into the chamber prior to measurement. The primary advantage of using bromide is that it is less toxic than the metal-based antifoulants. The drawback of the bromide technique is also discussed.

Conference Paper↗