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Narrowing historical uncertainty: probabilistic classification of ambiguously identified tree species in historical forest survey data

Historical data have increasingly become appreciated for insight into the past conditions of ecosystems. Uses of such data include assessing the extent of ecosystem change; deriving ecological baselines for management, restoration, and modeling; and assessing the importance of past conditions on the composition and function of current systems. One historical data set of this type is the Public Land Survey (PLS) of the United States General Land Office, which contains data on multiple tree species, sizes, and distances recorded at each survey point, located at half-mile (0.8 km) intervals on a 1-mi (1.6 km) grid. This survey method was begun in the 1790s on US federal lands extending westward from Ohio. Thus, the data have the potential of providing a view of much of the US landscape from the mid-1800s, and they have been used extensively for this purpose. However, historical data sources, such as those describing the species composition of forests, can often be limited in the detail recorded and the reliability of the data, since the information was often not originally recorded for ecological purposes. Forest trees are sometimes recorded ambiguously, using generic or obscure common names. For the PLS data of northern Wisconsin, USA, we developed a method to classify ambiguously identified tree species using logistic regression analysis, using data on trees that were clearly identified to species and a set of independent predictor variables to build the models. The models were first created on partial data sets for each species and then tested for fit against the remaining data. Validations were conducted using repeated, random subsets of the data. Model prediction accuracy ranged from 81% to 96% in differentiating congeneric species among oak, pine, ash, maple, birch, and elm. Major predictor variables were tree size, associated species, landscape classes indicative of soil type, and spatial location within the study region. Results help to clarify ambiguities formerly present in maps of historic ecosystems for the region and can be applied to PLS datasets elsewhere, as well as other sources of ambiguous historical data. Mapping the newly classified data with ecological land units provides additional information on the distribution, abundance, and associations of tree species, as well as their relationships to environmental gradients before the industrial period, and clarifies the identities of species formerly mapped only to genus. We offer some caveats on the appropriate use of data derived in this way, as well as describing their potential.

Ecosystems↗

Capturing interactions between nitrogen and hydrological cycles under historical climate and land use: Susquehanna watershed analysis with the GFDL land model LM3-TAN

We developed a process model LM3-TAN to assess the combined effects of direct human influences and climate change on terrestrial and aquatic nitrogen (TAN) cycling. The model was developed by expanding NOAA's Geophysical Fluid Dynamics Laboratory land model LM3V-N of coupled terrestrial carbon and nitrogen (C-N) cycling and including new N cycling processes and inputs such as a soil denitrification, point N sources to streams (i.e., sewage), and stream transport and microbial processes. Because the model integrates ecological, hydrological, and biogeochemical processes, it captures key controls of the transport and fate of N in the vegetation–soil–river system in a comprehensive and consistent framework which is responsive to climatic variations and land-use changes. We applied the model at 1/8° resolution for a study of the Susquehanna River Basin. We simulated with LM3-TAN stream dissolved organic-N, ammonium-N, and nitrate-N loads throughout the river network, and we evaluated the modeled loads for 1986–2005 using data from 16 monitoring stations as well as a reported budget for the entire basin. By accounting for interannual hydrologic variability, the model was able to capture interannual variations of stream N loadings. While the model was calibrated with the stream N loads only at the last downstream Susquehanna River Basin Commission station Marietta (40°02' N, 76°32' W), it captured the N loads well at multiple locations within the basin with different climate regimes, land-use types, and associated N sources and transformations in the sub-basins. Furthermore, the calculated and previously reported N budgets agreed well at the level of the whole Susquehanna watershed. Here we illustrate how point and non-point N sources contributing to the various ecosystems are stored, lost, and exported via the river. Local analysis of six sub-basins showed combined effects of land use and climate on soil denitrification rates, with the highest rates in the Lower Susquehanna Sub-Basin (extensive agriculture; Atlantic coastal climate) and the lowest rates in the West Branch Susquehanna Sub-Basin (mostly forest; Great Lakes and Midwest climate). In the re-growing secondary forests, most of the N from non-point sources was stored in the vegetation and soil, but in the agricultural lands most N inputs were removed by soil denitrification, indicating that anthropogenic N applications could drive substantial increase of N 2 O emission, an intermediate of the denitrification process.

Pennsylvania↗

Chronic and episodic acidification of streams along the Appalachian Trail corridor, eastern United States

Acidic atmospheric deposition has adversely affected aquatic ecosystems globally. As emissions and deposition of sulfur (S) and nitrogen (N) have declined in recent decades across North America and Europe, ecosystem recovery is evident in many surface waters. However, persistent chronic and episodic acidification remain important concerns in vulnerable regions. We evaluated acidification in 269 headwater streams during 2010–2012 along the Appalachian Trail (AT) that transits several ecoregions and is located downwind of high levels of S and N emission sources. Discharge was estimated by matching sampled streams to those of a nearby gaged stream and assuming equivalent daily mean flow percentiles. Charge balance acid‐neutralizing capacity (ANC) values were adjusted to the 15th (Q15) and 85th flow percentiles (Q85) by applying the ANC/discharge slope among sample pairs collected at each stream. A site‐based approach was applied to streams sampled twice or more and a second regression‐based approach to streams sampled once to estimate episodic acidification magnitudes as the ANC difference from Q15 to Q85. Streams with ANC <0 μeq/L doubled from 16% to 32% as discharge increased from Q15 to Q85 according to the site‐based approach. The proportion of streams with ANC <0 μeq/L at low flow and high flow decreased from north to south. Base cation dilution explained the greatest amount of episodic acidification among streams and variation in sulfate (SO 4 2− ) concentrations was a secondary explanatory variable. Episodic SO 4 2− patterns varied geographically with dilution dominant in northern streams underlain by soils developed in glacial sediment and increased concentrations dominant in southern streams with older, highly weathered soils. Episodic acidification increased as low‐flow ANC increased, exceeding 90 μeq/L in 25% of streams. Episodic increases in ANC were the dominant pattern in streams with low‐flow ANC values <30 μeq/L. Chronic and episodic acidification remain an ecological concern among AT streams. The approach developed here could be applied to estimate the magnitude and extent of chronic and episodic acidification in other regions recovering from decreasing levels of atmospheric S and N deposition.

Connecticut, Georgia, Maine, Massachusetts, Maryla↗

An alternative to soil taxonomy for describing key soil characteristics

We are pleased to see the letter by Schimel and Chadwick (Front Ecol Environ 2013; 11[8]: 405–06), highlighting the importance of soil characterization in ecological and biogeochemical research and explaining the value of soil taxonomy, and we agree with the authors that reporting soil taxonomic classification would greatly increase the interpretive value of many studies. However, in our extensive work with land managers and scientists, we have found that taxonomic classifications are not particularly useful because they are poorly understood. For those unfamiliar with soil taxonomy, deconstructing the meaning of a classification is not a simple task. Furthermore, because the US system of soil taxonomy is not applied universally, its utility as a means for effectively describing soil characteristics to readers in other countries is limited. Finally, and most importantly, even at the finest level of soil classification there are often large within-taxa variations in critical properties that can determine ecosystem responses to drivers such as climate and land-use change.

Frontiers in Ecology and the Environment↗

Effects of surface applications of biosolids on soil, crops, ground water, and streambed sediment near Deer Trail, Colorado, 1999-2003

The U.S. Geological Survey, in cooperation with Metro Wastewater Reclamation District and North Kiowa Bijou Groundwater Management District, studied natural geochemical effects and the effects of biosolids applications to the Metro Wastewater Reclamation District properties near Deer Trail, Colorado, during 1999 through 2003 because of public concern about potential contamination of soil, crops, ground water, and surface water from biosolids applications. Parameters analyzed for each monitoring component included arsenic, cadmium, copper, lead, mercury, molybdenum, nickel, selenium, and zinc (the nine trace elements regulated by Colorado for biosolids), gross alpha and gross beta radioactivity, and plutonium, as well as other parameters. Concentrations of the nine regulated trace elements in biosolids were relatively uniform and did not exceed applicable regulatory standards. All plutonium concentrations in biosolids were below the minimum detectable level and were near zero. The most soluble elements in biosolids were arsenic, molybdenum, nickel, phosphorus, and selenium. Elevated concentrations of bismuth, mercury, phosphorus, and silver would be the most likely inorganic biosolids signature to indicate that soil or streambed sediment has been affected by biosolids. Molybdenum and tungsten, and to a lesser degree antimony, cadmium, cobalt, copper, mercury, nickel, phosphorus, and selenium, would be the most likely inorganic 'biosolids signature' to indicate ground water or surface water has been affected by biosolids. Soil data indicate that biosolids have had no measurable effect on the concentration of the constituents monitored. Arsenic concentrations in soil of both Arapahoe and Elbert County monitoring sites (like soil from all parts of Colorado) exceed the Colorado soil remediation objectives and soil cleanup standards, which were determined by back-calculating a soil concentration equivalent to a one-in-a-million cumulative cancer risk. Lead concentrations in soil slightly exceed the U.S. Environmental Protection Agency toxicity-derived ecological soil-screening levels for avian wildlife. Plutonium concentration in the soil was near zero. Wheat-grain data were insufficient to determine any measurable effects from biosolids. Comparison with similar data from other parts of North America where biosolids were not applied indicates similar concentrations. However, the Deer Trail study area had higher nickel concentrations in wheat from both the biosolids-applied fields and the control fields. Plutonium content of the wheat was near zero. Ground-water levels generally declined at most wells during 1999 through 2003. Ground-water quality did not correlate with ground-water levels. Vertical ground-water gradients during 1999 through 2003 indicate that bedrock ground-water resources downgradient from the biosolids-applied areas are not likely to be contaminated by biosolids applications unless the gradients change as a result of pumping. Ground-water quality throughout the study area varied over time at each site and from site to site at the same time, but plutonium concentrations in the ground water always were near zero. Inorganic concentrations at well D6 were relatively high compared to other ground-water sites studied. Ground-water pH and concentrations of fluoride, nitrite, aluminum, arsenic, barium, chromium, cobalt, copper, lead, mercury, nickel, silver, zinc, and plutonium in the ground water of the study area met Colorado standards. Concentrations of chloride, sulfate, nitrate, boron, iron, manganese, and selenium exceeded Colorado ground-water standards at one or more wells. Nitrate concentrations at well D6 significantly (alpha = 0.05) exceeded the Colorado regulatory standard. Concentrations of arsenic, cadmium, chromium, lead, mercury, nickel, and zinc in ground water had no significant (alpha = 0.05) upward trends. During 1999-2003, concentrations of nitrate, copper, molybdenum, and selenium

Scientific Investigations Report↗

Fire rehabilitation effectiveness: a chronosequence approach for the Great Basin

Federal land management agencies have invested heavily in seeding vegetation for emergency stabilization and rehabilitation (ES&R) of non-forested lands. ES&R projects are implemented to reduce post-fire dominance of non-native annual grasses, minimize probability of recurrent fire, quickly recover lost habitat for sensitive species, and ultimately result in plant communities with desirable characteristics including resistance to invasive species and resilience or ability to recover following disturbance. Land managers lack scientific evidence to verify whether seeding non-forested lands achieves their desired long-term ES&R objectives. The overall objective of our investigation is to determine if ES&R projects increase perennial plant cover, improve community composition, decrease invasive annual plant cover and result in a more desirable fuel structure relative to no treatment following fires while potentially providing habitat for Greater Sage-Grouse, a species of management concern. In addition, we provide the locations and baseline vegetation data for further studies relating to ES&R project impacts. We examined effects of seeding treatments (drill and broadcast) vs. no seeding on biotic and abiotic (bare ground and litter) variables for the dominant climate regimes and ecological types within the Great Basin. We attempted to determine seeding effectiveness to provide desired plant species cover while restricting non-native annual grass cover relative to post-treatment precipitation, post-treatment grazing level and time-since-seeding. Seedings were randomly sampled from all known post-fire seedings that occurred in the four-state area of Idaho, Nevada, Oregon and Utah. Sampling locations were stratified by major land resource area, precipitation, and loam-dominated soils to ensure an adequate spread of locations to provide inference of our findings to similar lands throughout the Great Basin. Nearly 100 sites were located that contained an ES&R project. Of these sites, 61 were seeded by using a drill, 27 were broadcast aerially, and 12 had a combination of both. We randomly sampled three burned and seeded, burned and unseeded, and unburned and unseeded locations in the vicinity of the fire, each within the same ecological site. We measured foliar cover of all plant functional groups (perennial or annual, shrub, grass, forb, native or introduced), biological soil crusts, and abiotic (bare soil and litter) variables using the line-point intercept protocol. Fuel loads and horizontal fuel continuity were measured. We applied linear mixed models to response variables (cover and density of plant groups) relative to the dependent variables (seeding treatments and precipitation/temperature relationships. Post-fire strengths with native perennial grasses or shrubs in mixes did not increase density or cover of these groups significantly relative to unseeded, burned areas. Seeded non-native perennial grasses and the shrub Bassia prostrata were effective in providing more cover in aerial and drill seedings. Seeded non-native perennial grass cover increased with increased annual precipitation regardless of seeding type. Seeding native shrubs, particularly Artemisia tridentata, did not significantly increase shrub cover in burned areas. Cover of undesirable non-native annual grasses was lower in drill seedings relative to unseeded areas but only at higher elevations. Seeding effectiveness after wildfire is unpredictable in drier, low elevation environments, and our findings indicate management objectives are more likely met when focusing efforts on higher elevation or higher precipitation locations where establishment of perennial grasses is more likely. On sites where potential for invasion and dominance of non-native annuals is high, such as lower and drier sites, intensive methods of restoration that include invasive plant control before seeding may be required. Where establishment of native perennial plants is the goal, managers might consider using native-only seed mixtures, because we found that the non-native perennials typically used in Great Basin restoration efforts are selected for their competitive nature and may reduce establishment of less competitive native species. Although we attempted to include information on livestock grazing history after seedings, we were unable to extract sufficient data from files to address this topic that may play an additional role in understanding native plant abundance post-fire seeding. Evaluation of drill and aerial seeding effects on fuel characteristics focused on two metrics that are standard inputs for fire behavior models, fuel load and fuel continuity. Fuel loads were evaluated separately for total fuel load biomass, and the individual components that sum to total biomass, namely herbaceous, shrub, shrub:herbaceous ratio, litter, 10-hour, and 100-hour fuel biomasses. Fuel continuity was evaluated using the following cover categories, total, annual grass, annual forb, perennial forb perennial grass, shrub, litter, vegetative interspace, and perennial interspace. Drill seeding did not affect fuel loads, except to reduce 10-hour fuels, probably due to mechanical destruction of dead and down fuels by the drill seeding equipment. Drill seeding did affect fuel continuity, specifically decreasing total plant cover by increasing perennial grass cover which suppressed annual grass and litter production resulting in a net decrease in continuity, but only at the elevations above approximately 1500m. Aerial seeding had no effect on any fuel load or fuel continuity category. For the Greater Sage-Grouse habitat study, we developed multi-scale empirical models of sage-grouse occupancy in 211 randomly located plots within a 40 million ha portion of the species’ range. We then used these models to predict sage-grouse habitat quality at 101 ES&R seeding projects. We compared conditions at restoration sites to published habitat guidelines. Sage-grouse occupancy was positively related to plot- and landscape-level dwarf sagebrush (Artemisia arbuscula, A. nova, A. tripartita) and big sagebrush steppe, and negatively associated with non-native grass and human development. The predicted probability of sage-grouse occupancy at treated plots was low on average (0.07–0.09) and was not significantly different from burned areas that had not been treated. Restoration was more often successful at higher elevation sites with low annual temperatures, high spring precipitation, and high plant diversity. No plots seeded after fire (n=313) met all overstory guidelines for breeding habitats, but approximately 50% met understory guidelines, particularly for perennial grasses. This trend was similar for summer habitat. Ninety-eight percent of treated plots did not meet winter habitat guidelines. Restoration actions in burned areas did not increase the probability of meeting most guideline criteria. The probability of meeting guidelines was influenced by a latitudinal gradient, local climate, and topography. Post-fire seeding treatments in Great Basin sagebrush shrublands generally have not created high quality habitat for sage-grouse. Understory conditions are more likely to be adequate than those of overstory, but in unfavorable climates, establishing forbs and reducing cheatgrass dominance is unlikely. Reestablishing sagebrush cover will require more than 20 years using the restoration methods of the past two decades. Given current fire frequencies and restoration capabilities, protection of landscapes containing a mix of dwarf sagebrush and big sagebrush steppe, minimal human development, and low non-native plant cover may provide the best opportunity for conservation of sage-grouse habitats. Our database of ES&R locations has used the Land Treatment Digital Library to archive data and location information regarding our study (see Pilliod and Welty 2013). This has contributed to two additional studies. One examined the potential spread of Bassia prostrata (aka Kochia prostrata; forage kochia) from ES&R project locations (Gray and Muir 2013). The second used remote sensing to determine the phenology of vegetation green-up on post-fire seeded sites (Sankey et al. 2013).

California;Idaho;Oregon;Utah↗

Drought resistance and resilience: The role of soil moisture–plant interactions and legacies in a dryland ecosystem

In many regions of the world, climate change is projected to reduce water availability through changes in the hydrological cycle, including more frequent and intense droughts, as well as seasonal shifts in precipitation. In water-limited ecosystems, such as drylands, lower soil water availability may exceed the adaptive capacity of many organisms, leading to cascading ecological effects during (concurrent effects) and after drought (legacy effects). The magnitude and duration of concurrent and legacy effects depends on drought intensity, duration and timing as well as the resistance and resilience of the ecosystem. Here, we investigated the effects of drought seasonality and plant community composition on two dominant perennial grasses, Achnatherum hymenoides (C 3 photosynthesis) and Pleuraphis jamesii (C 4 photosynthesis), in a dryland ecosystem. The experiment consisted of three precipitation treatments: control (ambient precipitation), cool-season drought (−66% ambient precipitation November–April) and warm-season drought (−66% ambient precipitation May–October), applied in two plant communities (perennial grasses with or without a large shrub, Ephedra viridis ) over a 3-year period. We examined the concurrent and legacy effects of seasonal drought on soil moisture, phenology and biomass. Drought treatments had strong concurrent and legacy effects on soil moisture, which impacted the phenology and biomass of the two grasses. Drought reduced growing season length by delaying green-up (cool-season drought) or advancing senescence (warm-season drought) and reduced biomass for both species. Biomass and phenology legacy effects from drought emerged in the second and third years of the experiment. While we observed differential sensitivity to drought legacies between the two grasses, we found limited evidence that shrub presence had interactive effects with the drought treatment. Synthesis . The results from this study highlight how abiotic and biotic legacies can develop and influence a community's resistance and resilience to subsequent droughts. When the frequency of repeated extreme events, such as recurring seasonal droughts, exceeds the capacity of organisms or ecosystems to recover (i.e. resilience), persistent drought legacies can reduce the resistance to subsequent drought events. Overall, these results highlight how drought legacies are a product of ecological resistance and resilience to past drought and can influence ecosystem vulnerability to future droughts.

Utah↗

Does restoration of plant diversity trigger concomitant soil microbiome changes in dryland ecosystems?

Drylands are highly vulnerable to land degradation, and despite increasing efforts, restoration success remains low. Although often ignored in the design and deployment of management strategies, soil microbial communities might be critical for dryland restoration due to their central role in promoting soil stability, nutrient cycling and plant establishment. We collected soil samples from eight dryland restoration sites within RestoreNet, a restoration field trial network, and determined their soil microbiome using 16S rRNA (bacteria and archaea) and ITS (fungi) amplicon sequencing. Each previously degraded site was treated with monoculture (single species) and polyculture (multiple species) seedling plantings. Contrary to our initial expectations, we found that these different revegetation interventions did not trigger changes in microbial diversity, composition or relative abundance of functional groups across sites after 1 year of revegetation. Synthesis and applications . Considering the crucial role of soil micro-organisms in dryland ecosystem functions, our results suggest that site-specific targeted microbiome restoration should be considered to accelerate the establishment of desired microbial communities. Plant community-based restoration practices such as revegetation have a limited impact on soil micro-organisms in the short term.

Journal of Applied Ecology↗

Assessment of the role of bottomland hardwoods in sediment and erosion control

Drainage and clearing of bottomland hardwoods have long been recognized by the U.S. Environmental Protection Agency (EPA) and the U.S. Fish and Wildlife Service (Service) as important impacts of Federal water projects in the lower Mississippi River Valley. More recently, the water quality impacts of such projects (e.g., increases in sediments, nutrients, and pesticides) have also become of concern. In 1984, in an effort to better define problems concerning wetland losses and water degradation, EPA initiated a cooperative project with the Western Energy and Land Use Team (now the National Ecology Research Center) of the Service. Three phases of the project were identified: 1. To collect existing literature and data; 2. To select, develop, and test the utility of methods to quantify the relationships between land use, cover types, soils, hydrology, and water quality (as represented by sediment); and 3. To apply selected methodologies to several sites within the Yazoo Basin of Mississippi to determine the, potential effectiveness of various management alternatives to reduce sediment yield, increase sediment deposition, and improve water quality. Methods development focused on linking a simulation of water and sediment movement to a computerized geographic information system. We had several objectives for the resulting model. We desired that it should: 1. Estimate the importance of bottomland and hardwoods as a cover type that performs the functions of erosion and sediment control, 2. Simulate effects of proportions of ' various cover types and their specific spatial configurations, 3. Be applicable to moderately large spatial areas with minimal site-specific calibration, 4. Simulate spatial patterns of sediment loss-gain over time, and 5. Represent both sediment detachment and transport. While it was recognized that impacts and management alternatives could be sorted roughly into landscape measures and channel measures, the decision was made to focus study efforts mainly on landscape measures. Landscape measures include altered drainage and flooding patterns, altered cover types (e.g., conversion of bottomland hardwoods to agricultural crops, reforestation of cropland to bottomland hardwoods, and creation of riparian buffer strips), altered cropping and tillage patterns, altered routing of water, and creation of buffer strips along wetlands and channel margins. Channel measures include vegetative bank stabilization, grade control structures, and regulation of channel water volume and velocity. During the first year of the study, EPA decided not to fund the third phase of the project. This required considerable rescoping of the project with the result that application of the sediment mobilization, routing, and deposition models to various management alternatives and portions of the Yazoo Basin was somewhat restricted. We believe, however, that this report will provide a good understanding of the various modes of sediment mobilization, transport, and deposition within the Yazoo Basin, as well as of the role of bottomland hardwoods. The model developed in this study could be applied to a variety of management or mitigation alternatives prior to implementation to determine their relative effectiveness. Policy, political, and socio-economic consequences of any proposed management/mitigation practice, however, must ultimately be taken into consideration by those charged with management of water resources within the Yazoo Basin before any practice is implemented. This study makes no effort to judge the feasibility of management alternatives in this regard.

Report↗

Ecoregions of California

Ecoregions denote areas of general similarity in ecosystems and in the type, quality, and quantity of environmental resources. They are designed to serve as a spatial framework for the research, assessment, management, and monitoring of ecosystems and ecosystem components. By recognizing the spatial differences in the capacities and potentials of ecosystems, ecoregions stratify the environment by its probable response to disturbance (Bryce and others, 1999). These general purpose regions are critical for structuring and implementing ecosystem management strategies across Federal agencies, State agencies, and nongovernment organizations that are responsible for different types of resources in the same geographical areas (Omernik and others, 2000). The approach used to compile this map is based on the premise that ecological regions are hierarchical and can be identified through the analysis of the spatial patterns and the composition of biotic and abiotic phenomena that affect or reflect differences in ecosystem quality and integrity (Wiken, 1986; Omernik, 1987, 1995). These phenomena include geology, physiography, vegetation, climate, soils, land use, wildlife, and hydrology. The relative importance of each characteristic varies from one ecological region to another regardless of the hierarchical level. A Roman numeral hierarchical scheme has been adopted for different levels of ecological regions. Level I is the coarsest level, dividing North America into 15 ecological regions. Level II divides the continent into 50 regions (Commission for Environmental Cooperation Working Group, 1997, map revised 2006). At level III, the continental United States contains 105 ecoregions and the conterminous United States has 85 ecoregions (U.S. Environmental Protection Agency, 2013). Level IV, depicted here for California, is a further refinement of level III ecoregions. Explanations of the methods used to define these ecoregions are given in Omernik (1995), Omernik and others (2000), and Omernik and Griffith (2014). California has great ecological and biological diversity. The State contains offshore islands and coastal lowlands, large alluvial valleys, forested mountain ranges, deserts, and various aquatic habitats. There are 13 level III ecoregions and 177 level IV ecoregions in California and most continue into ecologically similar parts of adjacent States of the United States or Mexico (Bryce and others, 2003; Thorson and others, 2003; Griffith and others, 2014). The California ecoregion map was compiled at a scale of 1:250,000. It revises and subdivides an earlier national ecoregion map that was originally compiled at a smaller scale (Omernik, 1987; U.S. Environmental Protection Agency, 2013). This poster is the result of a collaborative project primarily between U.S. Environmental Protection Agency (USEPA) Region IX, USEPA National Health and Environmental Effects Research Laboratory (Corvallis, Oregon), California Department of Fish and Wildlife (DFW), U.S. Department of Agriculture (USDA)–Natural Resources Conservation Service (NRCS), U.S. Department of the Interior–Geological Survey (USGS), and other State of California agencies and universities. The project is associated with interagency efforts to develop a common framework of ecological regions (McMahon and others, 2001). Reaching that objective requires recognition of the differences in the conceptual approaches and mapping methodologies applied to develop the most common ecoregion-type frameworks, including those developed by the USDA–Forest Service (Bailey and others, 1994; Miles and Goudy, 1997; Cleland and others, 2007), the USEPA (Omernik 1987, 1995), and the NRCS (U.S. Department of Agriculture–Soil Conservation Service, 1981; U.S. Department of Agriculture–Natural Resources Conservation Service, 2006). As each of these frameworks is further refined, their differences are becoming less discernible. Regional collaborative projects such as this one in California, where some agreement has been reached among multiple resource-management agencies, are a step toward attaining consensus and consistency in ecoregion frameworks for the entire nation.

California↗

Assessing rangeland health under climate variability and change

RANGELAND HEALTH IN A CHANGING WORLD Rangeland health is an integrated metric that describes a complex suite of ecosystem properties and processes as applied to resource management. While the concept of “healthy” landscapes has a long history, the term “rangeland health” was codified in the US in 1994 as part of an effort to move towards a national, data driven, rangeland condition assessment (National Research Council 1994). Rangeland health encompasses the status of both soils and ecological processes as well as the condition of those ecosystems relative to ecological thresholds (e.g. “healthy”, “at-risk”, or “unhealthy"; National Research Council 1994). This latter application ensures that rangeland health assessments not only evaluate the conditions of plants and soils, but also gauge those conditions with respect to known or hypothesized ecological dynamics (Bestelmeyer et al. 2013) for a given set of abiotic constraints (climate, soil, and topographic setting). Thus, an assessment of rangeland health should identify the “degree to which the integrity of the soil and the ecological processes are sustained” (National Research Council 1994, Us Department of Agriculture 1997). Rangeland health attributes and assessment procedures have become widely utilized tools for measuring and monitoring dryland ecosystems, and they may provide valuable perspectives on rangeland response to climate change, although long-term directional change in environmental conditions represents a challenge for traditional rangeland health assessment frameworks.

Book chapter↗

Remote sensing of forest fire severity and vegetation recovery

Burned forested areas have patterns of varying burn severity as a consequence of various topographic, vegetation, and meteorological factors. These patterns are detected and mapped using satellite data. Other ecological information can be abstracted from satellite data regarding rates of recovery of vegetation foliage and variation of burn severity on different vegetation types. Middle infrared wavelengths are useful for burn severity mapping because the land cover changes associated with burning increase reflectance in this part of the electromagnetic spectrum. Simple stratification of Landsat Thematic Mapper data define varying classes of burn severity because of changes in canopy cover, biomass removal, and soil chemical composition. Reasonable maps of burn severity are produced when the class limits of burn severity reflectance are applied to the entire satellite data. Changes in satellite reflectance over multiple years reveal the dynamics of vegetation and fire severity as low burn areas have lower changes in reflectance relative to high burn areas. This results as a consequence of how much the site was altered due to the burn and how much space is available for vegetation recovery. Analysis of change in reflectance across steppe, riparian, and forested vegetation types indicate that fires potentially increase biomass in steppe areas, while riparian and forested areas are slower to regrow to pre-fire conditions. This satellite-based technology is useful for mapping severely burned areas by exploring the ecological manifestations before and after fire.

International Journal of Wildland Fire↗

Tidal freshwater forested wetlands: Future research needs and an overview of restoration: Chapter 17

Studies of tidal freshwater forested wetlands are few in contrast to the diversity of conditions and information needs that exist for this ecosystem type. Basic information is lacking on the physiological ecology of major wetland tree species under natural settings, the structure and dynamics of pure and mixed species communities, soil-plant interactions, biogeochemistry, hydrology, soils, wildlife habitat, primary biotic and abiotic functions, and the response of these systems to natural and human-caused disruptions. Existing information is often not in a form that can be applied to ecosystem problems, especially those related to management, restoration, or creation of tidal swamps. Accordingly, there is a critical need for research on fundamental biotic and abiotic processes and functions in tidal forested wetland landscapes on a local and regional scale. In this chapter, we detail those research needs, and we highlight some restoration ideas for tidal freshwater forested wetlands with the hope that much additional research will follow.

Book chapter↗

How a national vegetation classification can help ecological research and management

The elegance of classification lies in its ability to compile and systematize various terminological conventions and masses of information that are unattainable during typical research projects. Imagine a discipline without standards for collection, analysis, and interpretation; unfortunately, that describes much of 20th-century vegetation ecology. With differing methods, how do we assess community dynamics over decades, much less centuries? How do we compare plant communities from different areas? The need for a widely applied vegetation classification has long been clear. Now imagine a multi-decade effort to assimilate hundreds of disparate vegetation classifications into one common classification for the US. In this letter, we introduce the US National Vegetation Classification (USNVC; www.usnvc.org) as a powerful tool for research and conservation, analogous to the argument made by Schimel and Chadwick (2013) for soils. The USNVC provides a national framework to classify and describe vegetation; here we describe the USNVC and offer brief examples of its efficacy.

Frontiers in Ecology and the Environment↗

Restoration handbook for sagebrush steppe ecosystems with emphasis on greater sage-grouse habitat—Part 3. Site level restoration decisions

Sagebrush steppe ecosystems in the United States currently (2016) occur on only about one-half of their historical land area because of changes in land use, urban growth, and degradation of land, including invasions of non-native plants. The existence of many animal species depends on the existence of sagebrush steppe habitat. The greater sage-grouse ( Centrocercus urophasianus ) depends on large landscapes of intact habitat of sagebrush and perennial grasses for their existence. In addition, other sagebrush-obligate animals have similar requirements and restoration of landscapes for greater sage-grouse also will benefit these animals. Once sagebrush lands are degraded, they may require restoration actions to make those lands viable habitat for supporting sagebrush-obligate animals, livestock, and wild horses, and to provide ecosystem services for humans now and for future generations. When a decision is made on where restoration treatments should be applied, there are a number of site-specific decisions managers face before selecting the appropriate type of restoration. This site-level decision tool for restoration of sagebrush steppe ecosystems is organized in nine steps. Step 1 describes the process of defining site-level restoration objectives. Step 2 describes the ecological site characteristics of the restoration site. This covers soil chemistry and texture, soil moisture and temperature regimes, and the vegetation communities the site is capable of supporting. Step 3 compares the current vegetation to the plant communities associated with the site State and Transition models. Step 4 takes the manager through the process of current land uses and past disturbances that may influence restoration success. Step 5 is a brief discussion of how weather before and after treatments may impact restoration success. Step 6 addresses restoration treatment types and their potential positive and negative impacts on the ecosystem and on habitats, especially for greater sage-grouse. We discuss when passive restoration options may be sufficient and when active restoration may be necessary to achieve restoration objectives. Step 7 addresses decisions regarding post-restoration livestock grazing management. Step 8 addresses monitoring of the restoration; we discuss important aspects associated with implementation monitoring as well as effectiveness monitoring. Step 9 takes the information learned from monitoring to determine how restoration actions in the future might be adapted to improve restoration success.

Circular↗

Ecohydrological control of deep drainage in arid and semiarid regions

The amount and spatial distribution of deep drainage (downward movement of water across the bottom of the root zone) and groundwater recharge affect the quantity and quality of increasingly limited groundwater in arid and semiarid regions. We synthesize research from the fields of ecology and hydrology to address the issue of deep drainage in arid and semiarid regions. We start with a recently developed hydrological model that accurately simulates soil water potential and geochemical profiles measured in thick (>50 m), unconsolidated vadose zones. Model results indicate that, since the climate change that marked the onset of the Holocene period 10 000–15 000 years ago, there has been no deep drainage in vegetated interdrainage areas and that continuous, relatively low (<−1 MPa) soil water potentials have been maintained at depths of 2–3 m. A conceptual model consistent with these results proposes that the native, xeric‐shrub‐dominated, plant communities that gained dominance during the Holocene generated and maintained these conditions. We present three lines of ecological evidence that support the conceptual model. First, xeric shrubs have sufficiently deep rooting systems with low extraction limits to generate the modeled conditions. Second, the characteristic deep‐rooted soil–plant systems store sufficient water to effectively buffer deep soil from climatic fluctuations in these dry environments, allowing stable conditions to persist for long periods of time. And third, adaptations resulting in deep, low‐extraction‐limit rooting systems confer significant advantages to xeric shrubs in arid and semiarid environments. We then consider conditions in arid and semiarid regions in which the conceptual model may not apply, leading to the expectation that portions of many arid and semiarid watersheds supply some deep drainage. Further ecohydrologic research is required to elucidate critical climatic and edaphic thresholds, evaluate the role of important physiological processes (such as hydraulic redistribution), and evaluate the role of deep roots in terms of carbon costs, nutrient uptake, and whole‐plant development.

Ecology↗

Mapping hotspots of potential ecosystem fragility using commonly available spatial data

Effective conservation requires prioritizing areas that are vulnerable to large, irreversible changes. Unfortunately, rigorously documenting these changes with experiments and long-term monitoring is not only costly, but may provide evidence that is too late to facilitate proactive decisions. We use a simple model to illustrate that commonly available short-term spatial, “snapshot”, data from a given ecosystem along an environmental gradient can be used to identify environmental conditions under which different ecosystem states (e.g. different species compositions) co-occur in space. These environmental conditions are those under which future perturbations have the potential for discontinuous large, sometimes irreversible, effects; and can be mapped in space to predict potential spatial hotspots of ecosystem fragility. We apply these insights to ecologically important high-elevation subalpine meadows of the Sierra Nevada (California). Our analysis reveals specific areas within meadows that may be more vulnerable than others because their plant communities have the potential to shift to a different state. These shifts can be mechanistically explained by interactions between the vegetation and the local water regimes and/or the upper soil conditions. Our study provides a simple workflow using commonly available data to help prioritize conservation areas based on their potential sensitivity to upcoming perturbations. Such an approach could be very valuable to make most efficient use of conservation and management resources in the context of ongoing global changes.

California↗

Amendments fail to hasten biocrust recovery or soil stability at a disturbed dryland sandy site

In most drylands, biological soil crusts (biocrusts), an assemblage of lichens, bryophytes, fungi, green algae, and cyanobacteria, are critical to healthy ecosystem function. However, they are extremely sensitive to disturbance and attempts to facilitate their recovery have had variable success. In this study, we applied soil amendments designed to improve soil surface stability and accelerate biocrust recovery on an area disturbed by oil/gas exploration vehicles. Treatments included: 1) Control (one time water only); 2) Biocrust‐only: biocrust inoculum + nutrients in water; 3) Polyacrylamide gels (PAM; which are known to stabilize soils) + biocrust inoculum + nutrients in water; 4) Gypsum + biocrust inoculum + nutrients in water; and 5) Saline (NaCl) solution + biocrust inoculum + nutrients in water. Only the NaCl treatment showed any effects on soil properties and these were only short‐term. These effects included an increase in soil strength and a reduction in soil aggregate stability, unsaturated hydraulic conductivity (K h ), and cyanobacterial biomass. The inoculated biocrust material failed to develop and even after 10 years, there was only a very low natural recolonization of the plots. These results show that inoculating soils or applying these levels of soil amendments does not guarantee recovery of soil stability or biocrust, and that some sites are unlikely to recover without assistance. Thus, there is a need for more research into ways to enhance soil stability and identify the factors limiting biocrust establishment.

Restoration Ecology↗