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USGS2025

Prevalence of pelagic diatoms and harmful algae in tellinid bivalve diets during record low sea ice in the Pacific Arctic determined by DNA metabarcoding

Understanding changes at the base of the marine food web in the rapidly transforming Arctic is essential for predicting and evaluating ecosystem dynamics. The northern Bering Sea experienced record low sea ice in 2018, followed by the second lowest in 2019, highlighting the urgency of the issue for this region. In this study, we investigated the diet of the clam Macoma calcarea in the Pacific Arctic using DNA metabarcoding, employing 18S and rbcL markers to identify dietary components. Our findings revealed a strong dependence on pelagic diatoms, particularly Chaetoceros sp., with a near absence of ice algae in the clam diet. This pattern reflects the lack of lipid-rich ice algal production during these low sea ice events. Additionally, our analysis detected algae capable of producing harmful toxins, notably Alexandrium dinoflagellates, in the clam diet, underscoring the need for increased monitoring due to potential ecosystem and human health risks. This study demonstrates the utility of DNA metabarcoding in unraveling the complex dynamics of Arctic marine food webs and pelagic-benthic coupling, providing a glimpse of future conditions in a rapidly changing environment.

Bering Sea, Chukchi Sea↗

USGS2009

A comparison of pectoral fin contact between two different wild dolphin populations

Contact behaviour involving the pectoral fin has been documented in a number of dolphin species, and various explanations about its function have been offered. Pectoral fin contact can take a variety of forms, and involves a number of body parts and movements, likely differing depending upon social or ecological context. For this study, we compare the pectoral fin contact behaviour of two species of wild dolphins: Indo-Pacific bottlenose dolphins (Tursiops aduncus) from around Mikura Island, Japan, and Atlantic spotted dolphins (Stenella frontalis) from The Bahamas. The two study populations exhibit surprising similarity in the ways in which pectoral fin contacts are used, despite differences in species and environmental conditions at the two sites. Differences in contact rates for calves between the two sites suggest that calf-focused aggression from adult dolphins is more prevalent at Mikura than in The Bahamas. Our results suggest that pectoral fin contact behaviour seems to be driven primarily by social pressures, and may be similar in function to allogrooming described in primates. ?? 2008 Elsevier B.V.

Behavioural Processes↗

USGS2010

Guidelines for conducting Smolt survival studies in the Columbia River

For more than a decade, investigators from different research groups in the Pacific Northwest have been using electronic tags to estimate survival of salmonid smolts as they migrate seaward past hydroelectric dams and through impoundments on the Snake and Columbia Rivers. Over the years, they have refined both analytical and field methods associated with such studies. In this collaborative paper, they synthesize years of experience to formulate a set of guidelines that may assist others with the design and execution of survival studies involving smolts during their migratory phase.

Report↗

USGS2011

Pre-spawning migration of adult Pacific lamprey, Entosphenus tridentatus , in the Willamette River, Oregon, U.S.A.

We describe the migration distances and timing of the adult Pacific lamprey, Entosphenus tridentatus , in the Willamette River Basin (Oregon, U.S.A.). We conducted aerial surveys to track radio-tagged fish upstream of a major waterfall and hydropower complex en route to spawning areas. We detected 24 out of the 43 fish that passed the waterfall-hydropower complex. Of the detected fish, 17 were detected multiple times. Their maximum migration distance upstream in the mainstem Willamette approximated a normal distribution. The maximum distance migrated upstream did not significantly correlate with total body length ( r  = −0.186, P  = 0.385) or date that the fish passed Willamette Falls ( r  = −0.118, P  = 0.582). Fish migrated primarily during the spring to early summer period before stopping during the summer, when peak river temperatures (≥20°C). However, at least three fish continued to migrate upstream after September. Behavior ranged from relatively slow migration, followed by holding; to rapid migration, followed by slow migration further up in the basin. This study provides a basis for informing more detailed research on Pacific lamprey in the future.

Oregon↗

USGS2018

Stream mercury export in response to contemporary timber harvesting methods (Pacific Coastal Mountains, Oregon, USA)

Land-use activities can alter hydrological and biogeochemical processes that can affect the fate, transformation, and transport of mercury (Hg). Previous studies in boreal forests have shown that forestry operations can have profound, but variable effects on Hg export and methylmercury (MeHg) formation. The Pacific Northwest is an important timber producing region that receives large atmospheric Hg loads, but the impact of forest harvesting on Hg mobilization has not been directly studied and was the focus of our investigation. Stream discharge was measured continuously and Hg and MeHg concentrations measured monthly for 1.5 years following logging in three paired harvested and un-harvested catchments. There was no significant difference in particulate-bound Hg concentrations or loads in the harvested and unharvested catchments which may have resulted from the best management practices aimed at minimizing erosion. However, the harvested catchments had significantly higher discharge (32%), filtered Hg concentrations (28%), filtered Hg loads (80%), and dissolved organic carbon (DOC) loads (40%) compared to forested catchments. MeHg concentrations were low (mostly <0.05 ng L-1) in both harvested, un-harvested and downstream samples due to well-drained/unsaturated soil conditions and steep slopes with high energy eroding stream channels that were not conducive to the development of anoxic conditions. These results have important implications for the role forestry operations have in affecting catchment retention and export of Hg pollution.

Oregon↗

USGS2020

Spatially referenced models of streamflow and nitrogen, phosphorus, and suspended-sediment loads in streams of the Pacific region of the United States

Although spatial information describing the supply and quality of surface water is critical for managing water resources for human uses and for ecological health, monitoring is expensive and cannot typically be done over large scales or in all streams or waterbodies. To address the need for such data, the U.S. Geological Survey developed SPAtially Referenced Regression On Watershed attributes (SPARROW) for the Pacific region of the U.S. for streamflow and three water-quality constituents–total nitrogen, total phosphorus, and suspended sediment, based on a decadal time frame centered on the year 2012. The domain for these models included the Columbia River basin, the Puget Sound, the coastal drainages of Washington, Oregon, and California, and the Central Valley of California. Landscape runoff (represented by the difference between precipitation and evapotranspiration) was the largest source of streamflow, wastewater discharge, and atmospheric deposition were the largest contributors to total nitrogen yield from the Pacific region, wastewater discharge was the largest contributor to total phosphorus yield, and forest land was the largest contributor to suspended-sediment yield. Watersheds with relatively high water yields also generally had relatively high yields of total nitrogen, total phosphorous, and suspended sediment–except where there were large contributions from developed land and wastewater discharge. The data used in this study, including many that improved upon existing national data or were compiled specifically for the Pacific region, characterized the complex hydrologic and water-quality conditions in the region more completely than previous models. By using these new datasets, this investigation was able to account for the complex network of water diversions and transfers, quantify the contribution of nutrients from different sources of livestock manure, discern a signal from unpaved logging roads in the suspended-sediment yields from forested coastal watersheds, show how recent wildfire disturbance influences phosphorus and sediment delivery to streams, and how sediment delivery to streams is also sensitive to the intensity of cattle grazing. The results from this study could complement research and inform water-quality management activities in the Pacific region. Examples might include identifying potentially impaired waterbodies and guiding remediation efforts where impairment has been documented, explaining the spatial patterns in harmful algal blooms, and providing estimates of sediment and nutrient loadings to Pacific coast estuaries where such data are scarce or non-existent.

Pacific Region↗

USGS2015

Exploring drought controls on spring phenology

The timing of spring phenology can be influenced by several drivers. Many studies have shown the effect of temperature on spring vegetation growth, but the role of moisture is complex and not as well researched. We explored drivers for aspen spring phenology in the mountains of the western U.S. While temperature exerted control over the timing of aspen green-up in the spring, snow moisture as measured by April 1 snow water equivalent (SWE), played a significant role especially in southern locations bordering the Colorado Plateau. Maximum spring temperatures (March-May) were significantly (p<0.01) correlated with the start of the growing season across the entire Wasatch and Uinta Mountains and most of the western and northern Southern Rocky Mountains. Spring SWE was significantly (p<0.01) correlated with the growing season start across all of the Wasatch and Uinta Mountains and more than half of the Southern Rockies. The locations that experienced a larger snow influence, given by linear regression and R2 values, were located adjacent to the drier Colorado Plateau and south of 40oN latitude. Historical spatial patterns of regional snow accumulations and anomalies in the western U.S. have been chiefly explained by decadal antiphasing patterns across a north-south dipole. Anomalously low SWE co-occurs with a Pacific/North American teleconnection winter circulation associated with strong high pressure over the Pacific Northwest. The pattern shown in aspen phenology in this study, where the timing of spring green-up in the southern half of the intermountain West (south of a zone from 40oN - 42oN and mainly west of the continental divide in Colorado) showed higher sensitivity to winter snow moisture, and this spatial pattern was supported by other studies. Although winter moisture was not as consistent a factor as temperature in driving the start of the season, this study shows evidence that possible future winter drought could shift the growing season earlier than temperature increases alone.

Book chapter↗

USGS2015

Projected wave conditions in the Eastern North Pacific under the influence of two CMIP5 climate scenarios

Hindcast and 21st century winds, simulated by General Circulation Models (GCMs), were used to drive global- and regional-scale spectral wind-wave generation models in the Pacific Ocean Basin to assess future wave conditions along the margins of the North American west coast and Hawaiian Islands. Three-hourly winds simulated by four separate GCMs were used to generate an ensemble of wave conditions for a recent historical time-period (1976–2005) and projections for the mid and latter parts of the 21st century under two radiative forcing scenarios (RCP 4.5 and RCP 8.5), as defined by the fifth phase of the Coupled Model Inter-comparison Project (CMIP5) experiments. Comparisons of results from historical simulations with wave buoy and ERA-Interim wave reanalysis data indicate acceptable model performance of wave heights, periods, and directions, giving credence to generating projections. Mean and extreme wave heights are projected to decrease along much of the North American west coast. Extreme wave heights are projected to decrease south of &sim;50°N and increase to the north, whereas extreme wave periods are projected to mostly increase. Incident wave directions associated with extreme wave heights are projected to rotate clockwise at the eastern end of the Aleutian Islands and counterclockwise offshore of Southern California. Local spatial patterns of the changing wave climate are similar under the RCP 4.5 and RCP 8.5 scenarios, but stronger magnitudes of change are projected under RCP 8.5. Findings of this study are similar to previous work using CMIP3 GCMs that indicates decreasing mean and extreme wave conditions in the Eastern North Pacific, but differ from other studies with respect to magnitude and local patterns of change. This study contributes toward a larger ensemble of global and regional climate projections needed to better assess uncertainty of potential future wave climate change, and provides model boundary conditions for assessing the impacts of climate change on coastal systems.

Ocean Modelling↗

USGS2020

Runoff-initiated post-fire debris flow Western Cascades, Oregon

Wildfires dramatically alter the hydraulics and root reinforcement of soil on forested hillslopes, which can promote the generation of debris flows. In the Pacific Northwest, post-fire shallow landsliding has been well documented and studied, but the potential role of runoff-initiated debris flows is not well understood and only one previous to 2018 had been documented in the region. On 20 June 2018, approximately 1 year after the Milli fire burned 24,000 acres, a runoff-initiated debris flow occurred on the flanks of Black Crater in the Oregon Cascade Range. The debris flow was initiated via dispersed rilling on > 30-degree slopes near the crater rim and traveled > 1.5 km downslope. We measured exceptionally low soil infiltration rates at the study site, likely due to high burn severity during the Milli fire. Based on nearby 5-min rain gage data, we quantified rainfall rates for the storm event that triggered the debris flow. Our results show that peak 15-min rainfall rates were 25.4 mmh −1 , equaling or exceeding the measured infiltration rates at the study site, which had a geometric mean of ~ 24 mmh −1 . Field mapping shows that high burn severity resulted in the initiation of the debris flow and that convergent and steep topography promoted the development of a debris flow at this site. As wildfires increase in frequency and intensity across the western USA, the Pacific Northwest could become more susceptible to runoff-initiated debris flows. Therefore, characterization of the conditions that resulted in this debris flow is crucial for understanding how runoff-initiated debris flows may shape terrain and impact hazards in the Pacific Northwest.

Oregon↗

USGS2025

Estimated average annualized tsunami losses for the United States

Tsunami hazards are substantial threats to coastal communities across the United States (U.S.) and its territories. U.S. states and territories collaborate through the National Tsunami Hazard Mitigation Program (NTHMP) to develop their own tsunami-hazard information for outreach and evacuation planning. An effort to curate this tsunami-hazard information to support comprehensive risk analysis at the national level has not yet been completed. In support of this effort, the Federal Emergency Management Agency (FEMA) collaborated with the NTHMP, the National Oceanic and Atmospheric Administration (NOAA) and the U.S. Geological Survey (USGS) starting in 2023. This collaboration included the collection and analysis of existing tsunami hazard data and methods in the U.S. Tsunami subject matter experts identified and selected scientifically defensible methods for estimating the risks to buildings and populations in coastal communities. These efforts may support decision making regarding resilience policies, priorities, strategies and funding levels. Tsunamis can be triggered by earthquakes, subaerial or submarine landslides, volcanic eruptions, glacial calving, near-earth objects, weather or other events. These events can cause severe destruction, injuries, and loss of life due to powerful currents and flooding. Tsunamis pose a substantial threat to the western United States and all U.S. territories, as described below. ■ Hawaii is threatened by distant tsunamis due to its central location in the Pacific Ocean basin and has a history of local events. ■ Alaska, particularly the Aleutian Islands, faces local tsunami threats due to proximity to the Alaska-Aleutian Subduction Zone, as well as distant tsunamis from around the Pacific Ocean basin. ■ The western coast of the U.S. is threatened by distant tsunamis from around the Pacific Ocean basin and local source tsunamis from earthquakes generated within the Cascadia Subduction Zone in the Pacific Northwest. ■ American Samoa faces local tsunami threats from earthquakes generated in the nearby Tonga Trench, as well as distant tsunami threats. ■ Guam and the Commonwealth of the Northern Mariana Islands are threatened by local tsunamis from the nearby Mariana Subduction Zone, as well as distant sources from around the Pacific Ocean Basin. ■ Puerto Rico and the United States Virgin Islands are threatened by multiple local and distant tsunami sources, such as the Puerto Rico Trench (PRT), given their location in the complex seismic region of the Caribbean Sea. Several historical events stand out because of their catastrophic impacts. ■ In the Pacific Northwest, the 1700 Cascadia earthquake caused a tsunami that affected coastal Native American communities, though the extent of the damage is not fully documented (Ludwin, et al., 2005). ■ In Puerto Rico, the 1918 earthquake triggered a tsunami that caused $77 million in damage in 2022 dollars and 116 fatalities, primarily along the western coast (Coffman et al., 1982). ■ The 1946 Aleutian Islands earthquake triggered a massive tsunami that devastated Hilo, Hawaii, killing 158 people and resulting in approximately $375 million in damage (adjusted to 2022 dollars) (Fisher et al., 2023). ■ The 1964 Alaska earthquake (M 9.2) generated tsunamis that caused severe destruction in some communities across Alaska, Oregon, and California. This disaster led to a total of 124 fatalities and approximately $2.9 billion in property damage (adjusted to 2022 dollars) (Brocher et al., 2014) (Alaska Science Center, 2024). ■ In American Samoa, a tsunami generated by the 2009 Samoa earthquake (Mw 8.1) caused widespread devastation, resulting in 34 confirmed fatalities (Apatu et al., 2013) and economic losses exceeding $160 million (adjusted to 2022 dollars) (DHS, 2011). More recent events, including the 2010 Chile earthquake, the 2011 Japan earthquake, and the 2022 Tonga volcanic eruption, resulted in millions of dollars in damage to numerous ports and harbors in the U.S. South Pacific territories, Hawaii, and along the west coast of the U.S. (Lynett, et al., 2022) (Wilson, et al., 2013). Since these events, the expansion of the built environment in lowlying areas along the coast has increased the exposure of buildings and people, thereby further escalating community risk from tsunamis. This report provides a comprehensive national assessment of earthquake-generated tsunami risk. It does not include impacts from tsunamis generated by landslides, volcanic eruptions, glacial calving, near-earth objects, weather, or other events. This study is based on the best available hazard data from the U.S. Pacific Coast (California, Oregon and Washington), Alaska, Hawaii, U.S. Pacific Territories (American Samoa, Guam and Commonwealth of the Northern Mariana Islands) and Caribbean Territories (Puerto Rico and United States Virgin Islands). Tsunami risks associated with states along the East Coast, Gulf Coast, and Great Lakes are not included in this study because Hazus 6.1 software (FEMA 2024a) does not currently include the ability to analyze tsunami risk in those states. Once modeling capabilities and tsunami hazard data become available for additional states, FEMA may incorporate these data into future editions of this study.

Alaska, California, Hawaii Oregon, Washington↗

USGS2013

The landfall and inland penetration of a flood-producing atmospheric river in Arizona. Part I: observed synoptic-scale, orographic, and hydrometeorological characteristics

Atmospheric rivers (ARs) are a dominant mechanism for generating intense wintertime precipitation along the U.S. West Coast. While studies over the past 10 years have explored the impact of ARs in, and west of, California’s Sierra Nevada and the Pacific Northwest’s Cascade Mountains, their influence on the weather across the intermountain west remains an open question. This study utilizes gridded atmospheric datasets, satellite imagery, rawinsonde soundings, a 449-MHz wind profiler and global positioning system (GPS) receiver, and operational hydrometeorological observing networks to explore the dynamics and inland impacts of a landfalling, flood-producing AR across Arizona in January 2010. Plan-view, cross-section, and back-trajectory analyses quantify the synoptic and mesoscale forcing that led to widespread precipitation across the state. The analyses show that a strong AR formed in the lower midlatitudes over the northeastern Pacific Ocean via frontogenetic processes and sea surface latent-heat fluxes but without tapping into the adjacent tropical water vapor reservoir to the south. The wind profiler, GPS, and rawinsonde observations document strong orographic forcing in a moist neutral environment within the AR that led to extreme, orographically enhanced precipitation. The AR was oriented nearly orthogonal to the Mogollon Rim, a major escarpment crossing much of central Arizona, and was positioned between the high mountain ranges of northern Mexico. High melting levels during the heaviest precipitation contributed to region-wide flooding, while the high-altitude snowpack increased substantially. The characteristics of the AR that impacted Arizona in January 2010, and the resulting heavy orographic precipitation, are comparable to those of landfalling ARs and their impacts along the west coasts of midlatitude continents.

Arizona↗

USGS2005

Is disease an important mortality factor for Pacific herring?

Marine pelagic forage fishes, including sardines, anchovies, and herring, undergo large oscillations in population abundance. Although over-fishing can have a dramatic impact in reducing population size, this anthropogenic perturbation cannot fully account for all population declines because natural oscillations in marine pelagic fish biomasses occurred prior to the onset of commercial fishing. Among the herring metapopulation in Puget Sound / Straight of Georgia, the mean estimated annual mortality, exclusive of commercial fishing, increased from 20% in the late 1970’s and early 1980’s to 64-87% during 1996-1999. This natural mortality affects primarily the older age cohorts and resulted in recent decreased median ages of adult herring from age 4-6 cohorts to age 2-3 cohorts that die prior to iteroparous spawning. Surveys of wild herring from the region indicate that the protozoan parasite Ichthyophonus sp., is currently ubiquitous among Pacific herring populations in Washington and British Columbia, and prevalence of infection increase directly with herring age, from 12% among juveniles to 58% among the underrepresented age 6+ cohorts. Ichthyophonus can be highly pathogenic to immunologically naïve Pacific herring, causing 80% mortality 2 mo. after exposure in the laboratory. Current laboratory-based studies are underway to determine whether natural Ichthyophonus infections are terminal for the host, and whether these infections account for the decreasing median age of wild Pacific herring populations in recent years.

American Association of Wildlife Veterinarians↗

USGS2021

A study of marine temperature variations in the northern Gulf of Alaska across years of marine heatwaves and cold spells

We use over 100 in situ and remotely sensed temperature datasets to investigate thermal variability within and across the intertidal nearshore, coastal and offshore waters of the northern Gulf of Alaska. For the years 1970 through 2019 we document a warming trend of 0.24±0.10 °C per decade for the coastal northern shelf (0-250 m depth average) and a Gulf-wide sea surface temperature (SST) trend of 0.25±0.11 °C per decade. The Gulf-wide SST trend in the last halfcentury is more than twice that of the 0.11±0.003 °C warming rate computed for 1900-2019. Decorrelation length scales vary regionally and correlation of synoptic scale fluctuations (less than one month) between two stations rapidly degrades with increasing station distance, accounting for less than 10% of the covariance for separations exceeding 100 km. In contrast, stations separated by as much as 500 km retain 50% of their covariance in common for seasonal and sub-seasonal fluctuations. While satellite-based measures often capture most of the daily SST anomaly in coastal and offshore waters, a significant portion of the variance (30-40%) can remain unresolved, even exceeding 75% in the nearshore realm. Similarly, the North Pacific and Gulf of Alaska leading modes of SST variability leave large fractions (25-50%) of the subseasonal thermal variance unresolved. These evaluations show the importance of in situ temperature records for studies that seek to understand mechanistic responses of marine organisms to habitat variability at biologically important time and space scales. We find that near-bottom temperature anomalies on the outer shelf vary inversely with surface temperatures and with near-bottom salinity, suggesting that thermal anomalies are also linked with nutrient flux anomalies. A case study of the recent Pacific marine heatwave and transition out of preceding cool years shows that the northern Gulf of Alaska surface temperatures (0-50 m) were elevated from 2014 to 2019 relative to the long-term record. Coastal temperatures warmed contemporaneously with offshore waters through the 2013 calendar year. In contrast, deep inner shelf waters (200-250 m) exhibited delayed warming relative to the surface and relative to deep waters offshore at the same depth. While offshore surface waters cooled from early 2014 into 1-2 Science Synthesis Final Report Gulf Watch Alaska, 2021 early 2016, the shelf continued to warm over this time as the effects of local air-sea and advective heat fluxes continued to permeate across the northern Gulf. These results highlight the importance of different heating mechanisms for surface and near-bottom waters across the northern Gulf of Alaska.

Alaska↗

USGS2020

Climate-induced expansions of invasive species in the Pacific Northwest, North America: A synthesis of observations and projections

Climate change may facilitate the expansion of non-native invasive species (NIS) in aquatic and terrestrial systems. However, empirical evidence remains scarce and poorly synthesized at scales necessary for effective management. We conducted a literature synthesis to assess the state of research on the observed and predicted effects of climate change on a suite of 398 aquatic and terrestrial NIS now present in or a major threat to aquatic and terrestrial ecosystems of the Pacific Northwest (PNW), USA and British Columbia. Surprisingly, very few studies (n = 15) have investigated the observed effects of climate change on the distribution, abundance, spread, or impact of the focal NIS, with only five studies focusing on terrestrial (n = 2) or aquatic (n = 3) species within the PNW. Only 93 studies predicted the future dynamics of the focal NIS somewhere in their non-native range using climate model projections, yielding 117 species-specific predictions. However, only 30 of those studies generated predictions that overlapped with the PNW, and only six focused specifically on the expansion or abundance of NIS (n = 11 species) entirely within the region. Although our understanding of how climate change may interact with biological invasions is notably lacking, some evidence suggests that climate-induced NIS expansions are already underway in the PNW, particularly in aquatic ecosystems, and will be exacerbated by future changes in temperature and precipitation regimes. Better information is urgently needed for managers to implement strategic prevention, early detection, and proactive actions that ameliorate ecologically and economically devastating impacts of NIS.

Idaho, Montana, Nevada, Oregon, Utah, Washington, ↗

USGS2021

Effects of variable-density thinning on non-native understory plants in coniferous forests of the Pacific Northwest

Old-growth forests serve as critical habitat for many sensitive species, but management practices have diminished their prevalence, and former regions of old-growth are now dominated by second-growth stands lacking the structural heterogeneity, diversity, and species richness that these older forests possess. In western Washington state in the Pacific Northwest of the United States, the Olympic Habitat Development Study was designed to address this issue and hasten the development of specific old-growth features in second-growth stands using variable-density thinning. One concern with such methods, however, is the potential to introduce non-native plants, which can have negative ecological and economic impacts. Here, we examine how variable-density thinning influences desirable forest characteristics, such as increased plant species diversity, versus the less desirable effects of non-native plant species introduction. We test two hypotheses regarding plant invasions. First, thinning would promote establishment of non-native, shade-intolerant species, but their abundance would gradually decline over time. Second, thinning disturbance and increased heterogeneity of canopy cover would initially promote understory richness of all species, although richness would decline over time with canopy closure and increased cover of shrubs and regenerating trees. We found that the number and cover of non-native species initially increased after thinning, peaking at 16 species present in variable-density thinned treatments in year three. By year 17, 11 species remained throughout the seven 6.5 ha treatment plots sampled, and cover was negligible. As predicted, species richness increased following thinning, however, native species richness remained elevated through year 17, contrary to our hypothesis. Furthermore, native species diversity also increased following thinning and remained higher in thinned treatments than controls through year 17. Our results show that variable-density thinning in temperate coniferous forests can enhance native, but not exotic, plant richness and diversity in the long term.

Washington↗

USGS2016

Principles underlying the epizootiology of viral hemorrhagic septicemia in Pacific herring and other fishes throughout the North Pacific Ocean

Although viral hemorrhagic septicemia virus (VHSV) typically occurs at low prevalence and intensity in natural populations of Pacific herring ( Clupea pallasii ) and other marine fishes in the Northeast Pacific Ocean, epizootics of the resulting disease (VHS) periodically occur, often in association with observed fish kills. Here we identify a list of principles, based on a combination of field studies, controlled laboratory experiments, and previously unpublished observations, that govern the epizootiology of VHS in Pacific herring. A thorough understanding of these principles provides the basis for identifying risk factors that predispose certain marine fish populations to VHS epizootics, including the lack of population resistance, presence of chronic viral carriers in a population, copious viral shedding by infected individuals, cool water temperatures, limited water circulation patterns, and gregarious host behavioral patterns. Further, these principles are used to define the epizootiological stages of the disease in Pacific herring, including the susceptible (where susceptible individuals predominate a school or subpopulation), enzootic (where infection prevalence and intensity are often below the limits of reasonable laboratory detection), disease amplification (where infection prevalence and intensity increase rapidly), outbreak (often accompanied by host mortalities with high virus loads and active shedding), recovery (in which the mortality rate and virus load decline owing to an active host immune response), and refractory stages (characterized by little or no susceptibility and where viral clearance occurs in most VHS survivors). In addition to providing a foundation for quantitatively assessing the potential risks of future VHS epizootics in Pacific herring, these principles provide insights into the epizootiology of VHS in other fish communities where susceptible species exist.

Canadian Journal of Fisheries and Aquatic Sciences↗

USGS2017

Investigation of late Pleistocene and Holocene activity in the San Gregorio fault zone on the continental slope north of Monterey Canyon, offshore central California

We provide an extensive high‐resolution geophysical, sediment core, and radiocarbon dataset to address late Pleistocene and Holocene fault activity of the San Gregorio fault zone (SGFZ), offshore central California. The SGFZ occurs primarily offshore in the San Andreas fault system and has been accommodating dextral strike‐slip motion between the Pacific and North American plates since the mid‐Miocene. Our study focuses on the SGFZ where it has been mapped through the continental slope north of Monterey Canyon. From 2009 to 2015, the Monterey Bay Aquarium Research Institute collected high‐resolution multibeam bathymetry and chirp sub‐bottom profiles using an autonomous underwater vehicle (AUV). Targeted samples were collected using a remotely operated vehicle (ROV) to provide radiocarbon age constraints. We integrate the high‐resolution geophysical data with radiocarbon dates to reveal Pleistocene seismic horizons vertically offset less than 5 m on nearly vertical faults. These faults are buried by continuous reflections deposited after ∼17.5 ka and likely following erosion during the last sea‐level lowstand ∼21 ka, bracketing the age of faulting to ∼32–21 ka. Clearly faulted horizons are only detected in a small area where mass wasting exhumed older strata to within ∼25 m of the seafloor. The lack of clearly faulted Holocene deposits and possible highly distributed faulting in the study area are consistent with previous interpretations that late Pleistocene and Holocene activity along the SGFZ may decrease to the south. This study illustrates the complexity of the SGFZ, offshore central California, and demonstrates the utility of very high‐resolution data from combined AUV (geophysical)–ROV (seabed sampling) surveys in offshore studies of fault activity.

Bulletin of the Seismological Society of America↗

USGS1984

Effects of heptachlor- and lindane-treated seed on Canada geese

A study of Canada geese (B. canadensis) was conducted in the Pacific Northwest from 1978 through 1981. Lowered reproductive success, mortality of adults, and a population decline of resident western Canada geese (B. c. moffitti) at the Umatilla National Wildlife Refuge (Umatilla NWR) Oregon and Washington [USA] were associated with the use of heptachlor-treated wheat. Analyses of eggs and tissues from dead geese provided strong evidence that heptachlor was responsible for the mortality and decreased production. Residues of heptachlor epoxide (HE) in brains of B. c. moffitti found dead in 1978 and 1979 equalled or exceeded the lethal hazard zone of 8-9 .mu.g/g in experimental passerine birds; HE residues of > 10 .mu.g/g in sample eggs were associated with low nest success. The breeding population of Canada geese at Umatilla decreased from 129 pairs in 1974 to about 100 pairs in 1979. The heptachlor problem was restricted to the Umatilla area; HE residues were low in tissues and eggs collected at other sites in Oregon, Washington and Idaho. In Sept., 1979, the use of heptachlor-treated seed was banned in a 1700-km2 area that encompassed both sides of the Columbia River near Umatilla. Lindane was substituted for heptachlor in the restricted area in 1979, and its use was extended to much of the Columbia Basin in 1981. Concurrently, reproductive success of geese increased, mortality decreased, and the nesting population increased to 170 pairs by 1983. There was no evidence for either biomagnification of lindance residues from treated seed to goose tissues or eggs or for induction of adverse effects by this compound.

Oregon, Washington↗