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Research about Oregon

Source-linked reports with geographic coverage including Oregon.

At least 73 records · Page 4Linked to original sources
USGS2025

Dominant Dolichospermum and microcystin production in Detroit Lake (Oregon, USA)

The excessive growth of harmful cyanobacteria, including Dolichospermum (formerly known as Anabaena ), in freshwater bodies has become a pressing global concern. However, detailed information about the role of Dolichospermum in shaping bloom dynamics and producing cyanotoxins is limited. In this study, a bloom event dominated by Dolichospermum spp. at Detroit Lake (Oregon, USA) was examined from 2019 to 2021. In 2019, early summer cyanobacterial community succession reached up to 8.7 % of total phytoplankton abundance. Dolichospermum was the major microcystin (MC)-producing genus, with peak MC levels of 7.34 μg L −1 . The presence of MCs was strongly correlated with the abundance of Dolichospermum ( r = 0.84, p < 0.05) and MC synthetase gene, mcyE-Ana ( r = 0.63, p < 0.05). Metabolic analyses further showed that the presence of nif / pst genes linked to nitrogen and phosphorus metabolism was dominated by Dolichospermum from the bloom onset until September. In addition, the abundance of Dolichospermum was significantly correlated with the abundance of nitrogen-fixing nif-Ana gene ( r = 0.62, p < 0.05). As the lake experienced a longer N and P scarcity period (May to September), the N 2 -fixing Dolichospermum was able to dominate over other non-fixing cyanobacteria present, including Microcystis and Planktothrix . Overall, our results facilitate a better understanding of the organism and will help working toward managing/predicting future blooms.

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USGS2025

Hysteretic response of suspended-sediment in wildfire affected watersheds of the Pacific Northwest and Southern Rocky Mountains

Wildfires can have a profound impact on hydrosedimentary interactions, or the relationship between sediment and runoff, in forested headwater streams. Quantification of sediment-runoff dynamics at the event scale is integral for understanding source areas and transport of suspended-sediment through a watershed following wildfire. Here we used high-frequency turbidity and stream discharge data, coupled with discrete suspended-sediment measurements, in burned and unburned watersheds in the Southern Rocky Mountains and the western Cascades Range to evaluate the response of fine-grained (clay- and silt-sized particles) suspended-sediment. Hysteresis analysis was conducted on estimated suspended-sediment concentrations (using turbidity as a proxy) and streamflow through measurement of the difference in sediment concentration on the rising and falling limbs of the event hydrograph. All burned watersheds exhibited elevated fine suspended-sediment concentrations relative to concentrations found in pre-fire conditions. Changes to hysteretic response vary and may depend on a watershed's sediment connectivity limitations. Results suggest a watershed's inherent hillslope-to-channel (or lateral) connectivity is the primary factor controlling the relative magnitude of event-driven fine sediment fluxes in watersheds affected by wildfire. While wildfire did promote lateral connectivity through activation of hillslope sources, snowmelt, precipitation characteristics and antecedent conditions were more important drivers of hysteretic response than wildfire. For watersheds influenced by annual snowpack, we identified a predominantly clockwise hysteretic response during snowmelt and counterclockwise events during the late spring and summer months. There were also proportionally more counterclockwise events after wildfire in watersheds with high sediment connectivity. Results suggest contrasting wildfire-related sediment risk potential. Rivers in burned watersheds with high sediment connectivity may pose a higher risk to receiving waterbodies, such as larger tributaries or reservoirs, while rivers with low sediment connectivity may experience long-term sediment-related risk within the watershed above the outlet.

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USGS2025

New insights into gas-driven phase segregation in andesitic enclaves from Mt. Mazama (Crater Lake), USA

A key process in active magmatic systems is the “recharge” of deep-sourced mafic magma into cooler, more evolved, and crystal-rich shallow reservoirs; recharge may be the cause of, or response to, eruptive activity. Although compositional evidence for recharge has been extensively documented, physical models of recharge are limited, particularly processes that separate exsolving volatiles and melts from rapidly growing crystals. To improve constraints on phase separation behaviors, we re-examine andesitic enclaves in silicic andesite lava flows of Mt. Mazama (Crater Lake), USA, that provided early evidence of gas-driven filter pressing (Bacon, 1986). 2D and 3D imaging shows that enclaves have a sample-spanning crystal framework that is disrupted by melt patches, indicating that initially deformable crystal networks were subject to early phase reorganization. Small enclaves are poorly vesicular and require early gas loss. Large enclaves have porous cores with angular (diktytaxitic) voids that are well-connected in 3D and denser rinds with isolated pores. Large enclave rinds have similar bulk compositions to small enclaves but their less evolved cores require ~ 20% melt removal. In the large enclave, diktytaxitic core textures and gas fingering structures at the core–rind boundary suggest relatively slow late-stage outward gas migration. Both scaling arguments and evidence of outward gas/melt migration require a resistant rind. Rind formation is best explained by differential cooling and demonstrates the importance of thermal gradients for gas-driven filter pressing. A corollary is a limited time scale of recharge, enclave formation, and vesiculation to produce diktytaxitic textures, suggesting that recharge was (near) synchronous with eruption.

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USGS2025

Chapter 6: Climate change, wildlife, and wildlife habitats in the Oregon Coast Range

Climate change is likely to have profound effects on wildlife species within the Oregon Coast Adaptation Partnership (OCAP) assessment area, although the direction and magnitude of effects are likely to vary across species. Increased mean and extreme temperatures, especially during summer, may cause shifts in plant and animal species ranges, reduce habitat for some temperature-sensitive wildlife, alter plant phenology and the timing of available food resources, and affect species interactions (e.g., predation, competition). Altered timing of precipitation, summer drought, loss of fog, increased flooding events, earlier snowmelt, and rising sea level may reduce plant productivity, increase tree mortality, shift plant species composition, and lead to reduced wildlife habitat and habitat quality for some forests, riparian areas, wetlands, meadows, estuaries, and beaches. In addition, increasing frequency and extent of wildfire and insect outbreaks may reduce the extent of late-successional forest, reduce habitat connectivity, and increase the spread of invasive species. The biggest change expected for the assessment area is an increase in area where climatic conditions favor coastal mixed forest and a large reduction in area favoring montane conifer forest. Although actual changes in forest types may not necessarily occur by the end of the 21st century, climate change may add physiological and behavioral stress to wildlife. Some wildlife species will be able to persist in place and adapt to new conditions; some may be able to migrate to find suitable habitat; and some may be greatly reduced or extirpated from the assessment area or even go extinct. Shifts in major tree and shrub species will play a major role in food, den, and cover availability for wildlife. Rising sea level will reduce low-elevation habitats along the coast. An increase in the frequency of high-severity weather events will increase frequency and magnitude of flooding, including debris flow events. Coupled with increased temperatures during summer, this may reduce or fragment important ecosystems for aquatic and semi-aquatic species. Evaluation of the vulnerabilities of nine wildlife species based on literature reviews suggests that each species has life-history attributes that can lead to resilience or vulnerability to climate change effects. Depending on long-term objectives, several broad adaptation strategies focus on protecting refugia, establishing redundant wildlife strongholds with large-scale connectivity, and promoting structural and biological complexity.

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USGS2024

Geologic map of Scoggins Dam, Henry Hagg Lake, and Scoggins Valley, Washington County, Oregon

New geologic mapping (Wells and others, 2020b) and geophysical mapping (Blakely and others, 2000; McPhee and others, 2014; Wells and others, 2020a) document kilometers of Cenozoic right-lateral offset along the Gales Creek Fault Zone, a major, northwest-striking fault zone forming the boundary between the Tualatin Valley and the Coast Range. The Bureau of Reclamation’s (Reclamation) Scoggins Dam (fig. 1), in the Coast Range foothills west of Forest Grove, Oregon, lies within the Gales Creek Fault Zone as mapped by Wells and others (2020a, 2020b; fig. 2). Active faults of the Gales Creek Fault Zone defined by paleoseismic trenching (Redwine and others, 2017, 2019b, Horst and others, 2018, 2019, 2021, and Wells and others, 2020a) are presently mapped as projecting through the existing dam. The Pacific Northwest Region of Reclamation requested assistance with geologic studies around Scoggins Dam to provide better understanding of fault locations and their activity, which are needed to design a modification of the dam (Maguire, 2019a, b). The scope of this project includes detailed geology of the existing Scoggins Dam site, Henry Hagg Lake, the reservoir behind the dam, and Scoggins Valley downstream of the existing dam, particularly around a potential new dam site, where Scoggins Creek cuts through a narrow gap formed by a resistant felsic tuff bed that crosses the valley.

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USGS2024

Presence-absence surveys yield spatially imprecise information about nesting sites of an endangered, forest-nesting seabird

Presence-absence surveys are frequently used to monitor populations of rare and elusive species. Such data may also be used as a proxy for breeding activity, but links between presence-absence data and higher-order processes must be validated to determine their reliability. The Marbled Murrelet ( Brachyramphus marmoratus ) is a threatened seabird that nests in older-aged forests along the Pacific Coast. Its nests are exceptionally difficult to find, so we tested whether presence-absence surveys can help identify nesting sites. Between 2018 and 2022 we located 17 trees containing active murrelet nests in the Oregon Coast Range (USA) and 38 trees that purportedly contained no active nests (26 in occupied murrelet stands and 12 in unoccupied stands). Observers surveyed within 200 m of focal trees using standard presence-absence surveys, and we modeled the effects of site status (active nest or control) and distance from the focal tree on probability of recording murrelets. We never detected murrelets in unoccupied control sites. We found some evidence that the probability of recording presence was higher at active nesting sites (0.81, 95% CI: 0.71, 0.88) than at occupied control sites (0.71, 95% CI: 0.64, 0.78) although a null model had similar support. The probability of recording murrelet breeding behaviors in nesting and occupied control sites was 0.20 (95% CI: 0.14, 0.27) regardless of distance to a known active nest. These results suggest that presence-absence surveys may be useful for identifying plausible murrelet nesting habitat, but they are ineffective for identifying active nesting sites. Moreover, we estimated that 20 repeated surveys at a point in space are required to reasonably conclude there are no active nesting sites within 200 m. These findings serve as an important reminder of the limitations that can come with relying on presence-absence data alone to identify breeding sites.

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USGS2024

Climate vulnerability assessment of Oregon hatchery programs

The goal of this project was to assess the vulnerability to climate change impacts for a sample set of hatchery programs representing different geographic areas and primary anadromous species raised in state-managed Oregon hatcheries (Summary Figure 1). Freshwater and marine ecosystem processes can significantly influence salmon and steelhead survival, and understanding how these factors have affected historical returns can help managers evaluate the climate vulnerability of hatchery stocks. We examined stock-specific trends in smolt-to-adult returns (SARs), which represent the proportion of smolts released from the hatchery that are recovered in fisheries or as returning adult spawners. SARs are among the most consistent long term estimators of survival for hatchery-origin stocks. Depending on the stock, adult recoveries could occur in marine fisheries, freshwater fisheries, returns to the hatchery or another collection facility, and spawning ground surveys. We collected time series data on relevant ecological indicators and used generalized additive models (GAMs) to explore both univariate and multivariate relationships with SARs for each hatchery stock. An additional aspect of this assessment was to evaluate the climate vulnerability of resident trout stocking programs in the Department's East and West regions, incorporating insights from Oregon Department of Fish and Wildlife (ODFW) staff interviews and published data on the thermal tolerance of hatchery trout stocks. This assessment is provided in the ‘Climate vulnerability of trout stocking programs’ subsection below.

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USGS2024

Outmigration behavior and survival of juvenile Chinook salmon (Oncorhynchus tshawytscha) in response to deep drawdown of the Lookout Point Project, Middle Fork Willamette River, Oregon

An acoustic telemetry study was conducted during August 2023–February 2024 to evaluate outmigration behavior and survival of juvenile Chinook salmon (Oncorhynchus tshawytscha) in the Middle Fork Willamette River, Oregon, during an experimental operation that was designed to facilitate downstream passage through two reservoirs and two dams. The experimental operation consisted of lowering the water surface elevation of Lookout Point Reservoir by nearly 100 feet between August and December 2023, and passing water through regulating outlets at Lookout Point Dam. This operation was intended to reduce residence time for juvenile Chinook salmon in Lookout Point Reservoir so that these fish would enter the free-flowing Willamette River as quickly as possible. During our study, acoustic-tagged juvenile Chinook salmon were released weekly during late August to late October to determine how fish responded to the drawdown. Data collected during the study were analyzed using a temporally stratified multistate mark-recapture model. We found that Lookout Point Reservoir became isothermic during the drawdown and water temperature exceeded 18 degrees Celsius during most of September 2023. This appeared to adversely affect juvenile Chinook salmon because the proportion of tagged fish that were subsequently detected in the forebay of Lookout Point Dam following release at the head of Lookout Point Reservoir during August 30–September 29 ranged from 0.01 to 0.05 for weekly release groups. Detections increased to 0.44–0.52 for fish released later in the year when water temperatures decreased. We found that fish size was a significant predictor of survival as fork length was positively related to survival probability in reservoir and free-flowing river reaches of our study area, but negatively related to survival probability for fish passing Lookout Point Dam. We also found that increased regulating outlet flow at Lookout Point Dam resulted in increased survival probability for juvenile Chinook salmon and water temperature was inversely related to survival. Results from this study suggest that the drawdown failed to create conditions that facilitated downstream passage and survival of juvenile Chinook salmon through the Lookout Point Project. Our analysis provides insights into several key factors that influence survival. This information can be used by resource managers when considering revised operations that may lead to improved outmigration survival in the future.

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USGS2024

Advancing sustainable groundwater management with a hydro-economic system model: Investigations in the Harney Basin, Oregon

Groundwater resources frequently trend toward unsustainable levels because, absent effective institutions, individual water users generally act independently without considering the impacts on other users. Hydro-economic models (HEMs) of human-natural systems can play a positive role toward successful groundwater management by yielding valuable knowledge and insight. The current study explores how an HEM that captures essential physical and economic characteristics of a system can shed light on the system's processes and dynamics to benefit stakeholders, managers, and also researchers. These propositions are illustrated using the Harney Basin, Oregon, which has seen large groundwater declines in the past 20 years. The HEM shows that: (a) although current groundwater pumping rates will gradually raise costs and reduce well yields, irrigators gain the highest aggregate economic return by continuing current pumping; (b) lowland areas of the basin are hydrologically connected, which limits the efficacy of remedies focused on regulations only in some portions of the basin; (c) community expectations regarding the efficacy of several proposed solutions are overly optimistic; and (d) the study's scenarios identify interventions that would stabilize the groundwater system and prevent additional adverse impacts on residential and livestock wells and groundwater-dependent ecosystems. These interventions would require limiting groundwater pumping by nearly half and reducing annual profits by $7.5–$9.0M. The HEM also demonstrated its value to researchers: its insights shifted attention toward questions about Oregon's existing groundwater institutions and their inability to adaptively manage the transition from abundant groundwater to scarce groundwater in a timely manner.

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USGS2024

Evaluating spatially explicit management alternatives for an invasive species in a riverine network

Invasive species have substantial ecological and economic costs and removing them can require large investments by management agencies. Optimal spatial allocation of removal effort is critical for efficient and effective management of invasive species. Using a series of ecologically informed model simulations, we evaluated and compared different spatially explicit removal strategies for invasive rusty crayfish ( Faxonius rusticus ) in the John Day River, USA. We assessed strategies in terms of their performance on three likely management objectives: suppression (minimise overall population abundance), containment (minimise the spatial extent of invasion) and prevention (minimise spread into a specific area). We developed five spatial removal strategies to achieve those objectives, denoted as: Target Abundance (removal at locations with the highest population abundance), Target Growth (removal at locations with the highest population growth), Target Edges (removal at the most distant locations in the river), Target Downstream (removal at the most downstream invaded segments on the Mainstem), and Target Random (removal at randomly selected locations). Each strategy was assessed at various effort levels, referring to the number of spatial segments in the river in which removals were conducted, after seven years of management. We identified the alternative that best achieved each objective, based on decision criteria for risk-neutral and risk-averse decision-makers and further evaluated strategies based on Pareto efficiency, which identifies the set of alternatives for which an improvement on one objective cannot be had without a decline in performance on another. We found that Target Abundance and Target Growth strategies best achieved the suppression objective, for risk neutral and risk averse decision-makers, respectively and Target Downstream was always best in achieving the prevention objective across both types of decision-makers. No single strategy consistently performed best in terms of the containment objective. In terms of all three objectives, Target Downstream was consistently Pareto efficient across all levels of management effort and both decision criteria. The modelling framework we provided is adaptable to a variety of riverine invasive species to help assess and compare spatial management strategies.

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USGS2024

Geomorphic map of the Umatilla River corridor, Oregon

This map portrays the distribution of landforms along the Umatilla River in northeastern Oregon and covers a corridor 127 kilometers long from the confluence of the Umatilla River with the Columbia River upstream to Meacham Creek. The map encompasses the valley bottom and extends about 1 kilometer up the adjoining hillslopes. Map data are intended to support water quality and fisheries enhancement efforts pursuant to the First Foods, a resource-management approach that focuses on traditionally gathered foods including water, fish, big game, roots, and berries and calls attention to the reciprocity between people and the foods upon which humans depend. The Umatilla River drains about 6,300 square kilometers on the northwest slope of the Blue Mountains in northeast Oregon. Most of the drainage basin is underlain by Miocene basalt flows of the Columbia River Basalt Group. Younger, weakly lithified, late Miocene and early Pliocene gravel deposits of local origin (for example, McKay Formation) are mapped in a few places. Upland surfaces are mantled with windborne silt (loess) correlative with deposits elsewhere known as the Palouse Formation. Surfaces below an elevation of about 340 meters were inundated repeatedly by large Pleistocene glacial outburst floods, most emanating from glacial Lake Missoula in western Montana. In backflooded areas such as the lower Umatilla River valley, Missoula floods deposited extensive slack-water silt. Areas mapped as open water, active channel and tie channel, flood basin, valley bottom, and modified land constitute the geomorphic floodplain: the area subject to occasional inundation by the Umatilla River. Deposits and landforms within the floodplain are inset into Missoula flood deposits and hence postdate the 20–15-kilo-annum Missoula floods. Some floodplain deposits are no more than a few centuries old, as indicated by substantial erosion and deposition during the Umatilla River flood of February 2020, the largest since systematic measurements began in October 1903. Deposits and landforms of the floodplain are transient features within the longer-term incision of the Umatilla River into mid-Miocene flood basalts and younger gravel of the McKay Formation.

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USGS2024

Influence of stream temperature and human disturbance on prespawn mortality of Chinook Salmon in the Willamette River basin

Objective Premature mortality of adult female Chinook Salmon Oncorhynchus tshawytscha is a major barrier to population recovery. The Willamette River basin, Oregon, typifies the problems that are faced by fishery managers in the Pacific Northwest (USA). Adult salmon are trapped and transported upstream of dams to access historical spawning grounds, but annual rates of prespawn mortality (PSM) are high (often >40%) and may limit the recovery of natural populations. The purpose of this study was to identify potential factors related to PSM of female Chinook Salmon that are outplanted above dams and incorporate them into a modeling framework to facilitate adaptive management of outplanting operations. Methods We evaluated PSM in Fall Creek of the Willamette River basin prior to transport facility improvements in summer and fall of 2010–2017 and postimprovement during 2020–2021. We estimated PSM and conducted exploratory analyses to identify possible nontransport sources of stress that may contribute to the observed high PSM rates. Candidate factors included long‐term elevated temperature exposure, elevated temperature exposure below the trap, total number of outplanted fish, and monthly human disturbance of outplanted fish. We then developed and fit three models, each representing a hypothesis of a factor influencing PSM, incorporated them into a single alternative decision model, and conducted sensitivity analyses. Result Prespawn mortality averaged 0.66 (ranging from 0.37 to 0.94) over the study period. According to the simulation results, the top two management actions were to exclude human activities—swimming and fishing—from Fall Creek in July and August. Conclusion Expected PSM rates were predicted to be 0.38 when human activity was excluded in July and 0.37 for August. Sensitivity analyses indicated that the most influential decision model component was the choice of the alternative model.

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USGS2024

Constraining mean landslide occurrence rates for non-temporal landslide inventories using high-resolution elevation data

Constraining landslide occurrence rates can help to generate landslide hazard models that predict the spatial and temporal occurrence of landslides. However, most landslide inventories do not include any temporal data due to the difficulties of dating landslide deposits. Here we introduce a method for estimating the mean landslide occurrence rate of deep-seated rotational and translational slides derived solely from high-resolution (≤3 m) elevation data and globally available estimates of the diffusion coefficient for sediment flux. The method applies a linear diffusion model to the roughest landslide deposits until they reach a representative non-landslide roughness distribution. This estimates the time for a landslide deposit to be unrecognizable in high-resolution digital elevation data, which we term the mean lifetime of the landslide. Using the mean lifetime and number of landslides within an area of interest, we can estimate the mean occurrence rate of landslides over that domain. We validate this approach using a comprehensive temporal inventory of landslides in western Oregon created using age-roughness curves that are calibrated with high-resolution elevation data and radiocarbon data. We find good agreement between our diffusion method and the existing age-roughness-derived estimates, producing mean lifetimes of 4500 and 5200 years (4% difference), respectively. Hazard maps produced using the two methodologies generally agree, with the maximum differences in landslide probability reaching 0.1. Due to the relative abundance of high-resolution elevation data compared with age-dated landslides, our method could help constrain landslide occurrence rates in areas previously considered unfeasible.

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USGS2024

Zircon constraints on the eruptive sequence and magma evolution of rhyolites at South Sister volcano, Oregon

We present 230 Th- 238 U crystallization ages and trace element compositions for zircons spanning the late Pleistocene to Holocene rhyolite eruptive record at South Sister volcano in the central Oregon Cascade Range. Most zircon ages are between 100 and 20 ka, with very few in secular equilibrium (>350 ka). The weighted mean of zircon ages for the two oldest South Sister rhyolites, 31.5 ± 2.1 and 39.1 ± 2.4 ka, are significantly younger than the associated 40 Ar/ 39 Ar ages, 47.4 ± 9.7 and 51.4 ± 9.7 ka. We propose that these 40 Ar/ 39 Ar dates, performed on plagioclase separates, are compromised by a subtle amount of excess Ar and therefore the younger weighted mean zircon ages yield more reliable eruption ages. These results imply that the interval of rhyolite eruption at South Sister during the late Pleistocene was both shorter and more productive than previously thought and that eruption at South Sister initiated after Middle Sister. Compositionally, zircons from the Pleistocene rhyolites are broadly similar and show down-temperature zircon and plagioclase crystallization trends. However, we argue that destabilized amphibole and titanite in a common mush also exert leverage on the Pleistocene zircon trace element compositions. Divergence in the Eu/Eu* ratio between the Pleistocene and Holocene lavas implies chemically distinct magma reservoirs originating from the Pleistocene rhyolite eruptive sequence and the Holocene eruptive sequence. This work suggests a higher flux of rhyolite volcanism than previously thought and characterizes magmatic storage distinctions between the Pleistocene and Holocene rhyolites, aiding in the assessment of future eruptive hazards at South Sister volcano.

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USGS2024

Assessment of long-term changes in surface-water extent within Klamath Marsh, south-central Oregon, 1985–2021

The annual maximum extent of surface water in Klamath Marsh has naturally fluctuated in response to periods of wet and dry conditions in the surrounding basin. Field observations during the 2010s indicate that the annual maximum extent of surface water has been declining and the marsh is not responding to hydrologic inputs as it had historically. This report describes the results of a hydrologic evaluation of Klamath Marsh to characterize and understand multi-year declines in the surface-water extent and increased intermittency of streamflow exiting the marsh. Landsat imagery collected during 1985–2021 was processed to create a time series of annual maximum surface-water extent to assess changes in surface-water inundation within the marsh. A 50-percent decrease in the mean surface area of annual total open-water extent (TOWE) during the latter half of the study period (2003–21) compared to the first half (1985–2003) was observed in this 37-year time-series dataset. The change in open-water extent was offset by a corresponding increase in dry land in the marsh. Time series of streamflow, groundwater level, total annual precipitation, annual mean temperature, and anthropogenic water use and water management were compiled and evaluated to improve understanding of the factors affecting TOWE. Statistically significant downward trends in the regional groundwater table and streamflow into and out of the marsh were identified as well as statistically significant upward trends in annual mean temperature. Statistically significant correlations among TOWE, streamflow, and groundwater level also were identified. The decreasing trends could not be attributed to changes in total annual precipitation or changing anthropogenic groundwater use within the study area. Declines in the open-water extent of Klamath Marsh since 2000 principally are due to a decoupling of the groundwater and surface-water system beneath the marsh because of regional declines in groundwater level. Regional increases in air temperature and the reestablishment of more than 55,000 acres of forested land within the study area have likely contributed to increasing evapotranspiration, leaving less water available for groundwater recharge and stream base flow and resulting in basin-wide declines in streamflow and groundwater levels.

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USGS2024

Assisted migration of coho salmon: Influences of passage and habitat availability on population dynamics

Assisted migration is a means of introducing a species into a previously unoccupied area. Although this idea is relatively new for many species, there are many extant examples involving fish that can be instructive. We studied a case of assisted migration where upstream access of migrating adult coho salmon Oncorhynchus kisutch over a naturally impassible barrier was established through construction of fish ladders. Although these passage structures have successfully allowed coho salmon to colonize upstream locations, managers had concerns regarding how efficiently these structures passed fish, as well as questions regarding access to specific upstream habitats, and passage barriers further upstream. To address these concerns, we developed a stage-based population model to explore: (1) influences of passage over structures, (2) rearing habitats upstream of the structures, and (3) consequences of additional barriers to passage in the system. Model simulations suggest high fish passage at the ladders was associated with the highest smolt and adult abundance of coho salmon. The importance of passage was strongly influenced by juveniles rearing in a lake, where increased lake rearing at each passage scenario increased abundance of smolts and adults. Opening habitat further upstream was estimated to increase adult and smolt abundance up to 12%. Results of model simulations also helped to identify uncertainties that could be evaluated further (e.g., juvenile rearing in the lake). In general, our findings point to the importance of considering a full range of processes that can drive expected outcomes for assisted migration.

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USGS2024

Spatio-temporal distribution of adult Pacific lamprey Entosphenus tridentatus relative to habitat fragmentation

Pacific lamprey ( Entosphenus tridentatus ), a fish species native to the Pacific Northwest (USA), have distinctive cultural and ecological value but determining their spatial and temporal distribution is challenging due to a general lack systematic monitoring. In this study, we used counts of Pacific lamprey redds to model the probability of occurrence and abundance of Pacific lamprey based on environmental covariates including artificial barriers, assuming higher predicted lamprey redds translates to more suitable spawning habitats. Using generalized linear mixed zero-inflated models, results suggest that Pacific lamprey abundance was generally lower in high gradient streams, further from the ocean. Stream reaches with warmer spring water temperatures and greater historical median spring flows supported higher abundances. Lamprey occurrence was primarily influenced by spring water temperatures and distance from the ocean. We further observed that when streams warm beyond 18°C, confidence intervals around the abundance estimates widen and zero-inflation increases, indicating a decrease in occurrence. One objective of the study was to recommend where barrier removal or restoration should be prioritized to increase passage and thus access to upstream habitats. We considered artificial barriers to primarily influence the probability of occurrence through access. The barrier variable in this model had a negative effect on the probability of lamprey occurrence, but it was not a strong predictor in the model. While we are not able to suggest specific locations that would most benefit barrier removal or improvement based on these model results, we can identify the watersheds with a higher probability to support Pacific lamprey and provide potential additional habitats by improving habitat connectivity. Focusing restoration and/ or removal of barriers on watersheds in the Mid-South region of the Oregon Coast (i.e., Alsea, Siuslaw, Coos, Coquille, and Sixes rivers) with higher habitat suitability could prioritize use of limited funds, increase the probability of benefiting Pacific lamprey, and potentially other native lampreys and migratory (e.g., salmon, steelhead; Oncorhynchus ) species. Although this manuscript focuses on the Oregon Coast region, the methods are transferrable to other regions where Pacific lamprey are present.

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