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Influence of climate, post‐treatment weather extremes, and soil factors on vegetation recovery after restoration treatments in the southwestern US

Aims Understanding the conditions associated with dryland vegetation recovery after restoration treatments is challenging due to a lack of monitoring data and high environmental variability over time and space. Tracking recovery trajectories with satellite‐based vegetation indices can strengthen predictions of restoration outcomes across broad areas with varying environmental conditions. Location Southwestern United States. Methods We quantified the recovery trajectories of spring and summer soil‐adjusted total vegetation index (SATVI) for 5 to 10 year periods following post‐wildfire seeding or prescribed burns for 241 treatment sites, and related SATVI to ground‐based vegetation cover. We modeled SATVI based on time since treatment, yearly temperature and precipitation, weather extremes following treatment, soil available water capacity, invasive species presence, and treatment type. We also tested for the effects of environmental variables on trajectories, by examining interactions with years post‐treatment. Results Ground‐based vegetation cover and SATVI were highly correlated. Most treatment sites had positive recovery rates for spring (82%) and summer (85%) SATVI. Several environmental variables affected vegetation recovery trajectories as indicated by interactions with time since treatment. Yearly warm season precipitation had a positive effect on SATVI recovery that increased over time, whereas the positive effect of extreme high warm season precipitation following treatment decreased over time for both seasons of vegetation measurements. For spring SATVI, the positive effect of cool season yearly precipitation increased over time while the negative effect of extreme high temperatures following treatment became more negative over time. Invasive species presence led to higher spring, but not summer, SATVI. Conclusions Satellite‐based remote sensing is a promising tool to assess vegetation recovery following restoration treatments, particularly when it is combined with ground‐based monitoring. Our results suggest that weather extremes following restoration treatments can affect vegetation recovery trajectories and should be considered in decisions such as the timing of restoration treatments.

Applied Vegetation Science

Future frequencies of extreme weather events in the National Wildlife Refuges of the conterminous U.S.

Climate change is a major challenge for managers of protected areas world-wide, and managers need information about future climate conditions within protected areas. Prior studies of climate change effects in protected areas have largely focused on average climatic conditions. However, extreme weather may have stronger effects on wildlife populations and habitats than changes in averages. Our goal was to quantify future changes in the frequency of extreme heat, drought, and false springs, during the avian breeding season, in 415 National Wildlife Refuges in the conterminous United States. We analyzed spatially detailed data on extreme weather frequencies during the historical period (1950–2005) and under different scenarios of future climate change by mid- and late-21st century. We found that all wildlife refuges will likely experience substantial changes in the frequencies of extreme weather, but the types of projected changes differed among refuges. Extreme heat is projected to increase dramatically in all wildlife refuges, whereas changes in droughts and false springs are projected to increase or decrease on a regional basis. Half of all wildlife refuges are projected to see increases in frequency (> 20% higher than the current rate) in at least two types of weather extremes by mid-century. Wildlife refuges in the Southwest and Pacific Southwest are projected to exhibit the fastest rates of change, and may deserve extra attention. Climate change adaptation strategies in protected areas, such as the U.S. wildlife refuges, may need to seriously consider future changes in extreme weather, including the considerable spatial variation of these changes.

Biological Conservation

Identifying alternate pathways for climate change to impact inland recreational fishers

Fisheries and human dimensions literature suggests that climate change influences inland recreational fishers in North America through three major pathways. The most widely recognized pathway suggests that climate change impacts habitat and fish populations (e.g., water temperature impacting fish survival) and cascades to impact fishers. Climate change also impacts recreational fishers by influencing environmental conditions that directly affect fishers (e.g., increased temperatures in northern climates resulting in extended open water fishing seasons and increased fishing effort). The final pathway occurs from climate change mitigation and adaptation efforts (e.g., refined energy policies result in higher fuel costs, making distant trips more expensive). To address limitations of past research (e.g., assessing climate change impacts for only one pathway at a time and not accounting for climate variability, extreme weather events, or heterogeneity among fishers), we encourage researchers to refocus their efforts to understand and document climate change impacts to inland fishers.

Fisheries

A statement of common ground regarding the role of wildfire in forested landscapes of the western United States

For millennia, wildfires have markedly influenced forests and non-forested landscapes of the western United States (US), and they are increasingly seen as having substantial impacts on society and nature. There is growing concern over what kinds and amounts of fire will achieve desirable outcomes and limit harmful effects on people and nature. Moreover, the increasing complexity surrounding cost and management of wildfires suggests that science should play a more prominent role in informing decisions about the need for fire in nature, and the need for society to adapt to the inevitable occurrence of different kinds and amounts of fire and smoke. Scientists widely view the natural wildfire regime as essential to western US forest ecosystem functioning. However, debates continue over how much low-, moderate-, and high severity fire is “natural” or desirable in these forests. Ongoing disagreement centers on the characteristics and importance of historical proportions and patch size distributions of low-, moderate-, and high-severity fires of dry, moist, and cold forests, and on the ecological consequences of changing fire-patch patterns and relative abundances. Scientists also debate the relative importance of climate and extreme weather versus fuel as drivers of high-severity fire, as well as the effectiveness and value of fuel treatments for reducing risks of undesired fire effects. Climate research shows that we should expect shifting future climates in all ecoregions. These expected changes make it difficult for scientists, land managers, and decision-makers to know the degree to which future forest management should be informed by historical conditions. There also is disagreement about how to make western forests more resilient to future disruptions in both climatic and fire regimes. To complicate matters, areas of scientific agreement -- the “common ground” shared by those in the research community -- are poorly articulated. Thus, the focus of the Fire Research Consensus (FRC) project has been to identify common ground among scientists, and provide a summary that can inform management. Land and fire managers are one audience for this report, as are stakeholders and the interested public. Our analysis, which results from extensive scientific literature reviews and questionnaires sent to western fire scientists and land managers, is summarized in nine key topics: A. Fire history and fire ecology vary with geography. B. Human impacts and management history vary with geography. C. Fire is a keystone process, which occurs in almost all western US forest types. D. Knowledge of historical range of variability (HRV) is useful but does not dictate land management goals. E. Forest structure, composition, and fuels have changed, affecting burn severity and fire extent. F. Climate and fuels both influence current fire sizes and their severities. G. The role of changing climatic conditions is increasingly important. H. Multiple fire ecology and fire history research approaches can be useful for characterizing fire regimes. I. Many existing fire management tools and strategies can be useful moving forward. We found much common ground that will be useful to scientists, managers, citizens, and policy decision-makers. For example, there is wide agreement among scientists that fire is one of the most essential influences on western forests and that more fire is needed on most landscapes, but not all wildfire behavior or extent will do. Fires can produce more positive benefits and fewer negative impacts when they burn with an ecologically appropriate mix and pattern of low, moderate, and high severity. Managers will need assistance and funding to create landscape conditions that favor more desirable fire behavior at broad spatial scales. Note that much societal impact from western wildfires occurs in non-forested landscapes that are not covered in this report, where findings would differ from those reported here for forested landscapes. We summarize additional key points below.

Western United States

Weather affects post‐fire recovery of sagebrush‐steppe communities and model transferability among sites

Altered climate, including weather extremes, can cause major shifts in vegetative recovery after disturbances. Predictive models that can identify the separate and combined temporal effects of disturbance and weather on plant communities and that are transferable among sites are needed to guide vulnerability assessments and management interventions. We asked how functional group abundance responded to time since fire and antecedent weather, if long‐term vegetation trajectories were better explained by initial post‐fire weather conditions or by general five‐year antecedent weather, and if weather effects helped predict post‐fire vegetation abundances at a new site. We parameterized models using a 30‐yr vegetation monitoring dataset from burned and unburned areas of the Orchard Training Area (OCTC) of southern Idaho, USA, and monthly PRISM data, and assessed model transferability on an independent dataset from the well‐sampled Soda wildfire area along the Idaho/Oregon border. Sagebrush density increased with lower mean air temperature of the coldest month and slightly increased with higher mean air temperature of the hottest month, and with higher maximum January–June precipitation. Perennial grass cover increased in relation to higher precipitation, measured annually in the first four years after fire and/or in September–November the year of fire. Annual grass increased in relation to higher March–May precipitation in the year after fire, but not with September–November precipitation in the year of fire. Initial post‐fire weather conditions explained 1% more variation in sagebrush density than recent antecedent 5‐yr weather did but did not explain additional variation in perennial or annual grass cover. Inclusion of weather variables increased transferability of models for predicting perennial and annual grass cover from the OCTC to the Soda wildfire regardless of the time period in which weather was considered. In contrast, inclusion of weather variables did not affect transferability of the forecasts of post‐fire sagebrush density from the OCTC to the Soda site. Although model transferability may be improved by including weather covariates when predicting post‐fire vegetation recovery, predictions may be surprisingly unaffected by the temporal windows in which coarse‐scale gridded weather data are considered.

Idaho

Monitoring and understanding changes in heat waves, cold waves, floods, and droughts in the United States: State of knowledge

Weather and climate extremes have been varying and changing on many different time scales. In recent decades, heat waves have generally become more frequent across the United States, while cold waves have been decreasing. While this is in keeping with expectations in a warming climate, it turns out that decadal variations in the number of U.S. heat and cold waves do not correlate well with the observed U.S. warming during the last century. Annual peak flow data reveal that river flooding trends on the century scale do not show uniform changes across the country. While flood magnitudes in the Southwest have been decreasing, flood magnitudes in the Northeast and north-central United States have been increasing. Confounding the analysis of trends in river flooding is multiyear and even multidecadal variability likely caused by both large-scale atmospheric circulation changes and basin-scale “memory” in the form of soil moisture. Droughts also have long-term trends as well as multiyear and decadal variability. Instrumental data indicate that the Dust Bowl of the 1930s and the drought in the 1950s were the most significant twentieth-century droughts in the United States, while tree ring data indicate that the megadroughts over the twelfth century exceeded anything in the twentieth century in both spatial extent and duration. The state of knowledge of the factors that cause heat waves, cold waves, floods, and drought to change is fairly good with heat waves being the best understood.

Bulletin of the American Meteorological Society

Population densities and trends of landbirds in the National Park of American Samoa

The National Park of American Samoa (NPSA), which protects some of the most intact tropical rainforest in the South Pacific, is exposed to recurring, intense tropical cyclones, including Tropical Cyclone Gita in 2018. In combination with other anthropogenic pressures, cyclones represent a potential source of disturbance to landbird populations, particularly native frugivorous and seed-dispersing species. Long-term monitoring provides a means to evaluate population trajectories following disturbance events and to identify potential management gaps. Landbird surveys were conducted in the Tutuila and Taʻū units of NPSA in 2011, 2018, and 2023 using point-transect distance sampling, with vegetation composition and structure quantified at each sampling station. Species-specific detection functions were fitted to count data to estimate densities by unit, with variance estimated using bootstrap procedures. Comparisons of 2018 and 2023 density estimates using two-sample z-tests indicated that changes in most landbird populations were inconclusive. Since 2018, increases in density were observed for the Pacific Imperial Pigeon ( Ducula pacifica ) and Crimson-crowned Fruit Dove ( Ptilinopus porphyraceus ) on Tutuila, while decreases were observed for the Pacific Kingfisher ( Todiramphus sacer ) on Tutuila, and for the Polynesian Wattled Honeyeater ( Foulehaio carunculatus ), Polynesian Starling ( Aplonis tabuensis ), and Samoan Starling ( Aplonis atrifusca ) on Taʻū. The Many-colored Fruit Dove ( Ptilinopus perousii ) remained rare in both units, and the Manuʻa Shrikebill (Clytorhynchus vitiensis powelli) was narrowly distributed on Taʻū, with insufficient detections of either species to estimate density. The cryptic Spotless Crake ( Zapornia tabuensis ) was detected only in 2018. Changes in tree canopy cover and height did not exhibit patterns clearly associated with a major disturbance event and likely reflected differences in sampling frames among surveys. Invasive non-native plants, most notably Miconia crenata , were widespread in both units. Although many landbird populations in NPSA remain abundant, inference from current monitoring is constrained by limited information on vital rates and species-specific responses to invasive species, disease, habitat change, and extreme weather. As climate change is projected to increase tropical cyclone intensity in the South Pacific, sustained monitoring and targeted management will be important for understanding and conserving landbird populations in American Samoa.

National Park of American Samoa, Ta'u, Tutuila

Sensitivity of North American grassland birds to weather and climate variability

Grassland birds in North America have experienced sharp declines over the last 60 years driven by the widespread loss and degradation of grassland habitats. In recent decades, modern climate change has amplified these pressures. Climate change is occurring more rapidly in grasslands relative to some other ecosystems, and exposure to extreme and novel climate conditions may affect grassland bird ecology and demographics. To understand the potential effects of weather and climate variability on grassland birds, we systematically reviewed published empirical relationships between temperature and precipitation and demographic responses in grassland bird species of North America. We used a vote-counting approach to quantify the frequency and direction of significant effects of weather and climate variability on grassland birds. We found that grassland birds were likely to experience both positive and negative effects of higher temperatures and altered precipitation, with moderate, sustained increases in mean temperature and precipitation potentially benefiting some species, but extreme heat, drought, and heavy rainfall often reducing abundance and nest success. These patterns varied among climate regions, temporal scales of temperature and precipitation (< 1 month or ≥ 1 month), and taxa. The sensitivity of grassland bird populations to extreme weather and altered climate variability will likely be mediated by regional climates, interaction with other stressors, life history strategies of various species, and species’ tolerances for novel climate conditions.

Conservation Biology

Climate change science and modeling

This chapter provides a brief background on climate change science, climate simulation models, and models that project the impacts of changes in climate on tree species and ecosystems. Throughout the chapter, boxes list resources for more information on each topic. A more detailed scientific review of climate change science, trends, and modeling can be found in the Intergovernmental Panel on Climate Change (IPCC) Fifth Assessment Report (IPCC 2014), and the Fourth National Climate Assessment (U.S. Global Climate Research Program [USGCRP] 2017).

Delaware, Maryland, New Jersey, New York, Pennsylv

Association of excessive precipitation and agricultural land use with honey bee colony performance

Context: From landscape variables to weather, multiple environmental factors affect honey bees and other pollinators. Detailed honey bee colony assessments in a variety of landscape and weather conditions offer the opportunity to develop a mechanistic understanding of how landscape composition, configuration, and weather are associated with colony nutrition, demography, and productivity. Objectives: Our objective was to test if weather and landscape characteristics (e.g., agricultural versus forested land use) are associated with different honey bee colony outcomes (foraged nectar mass, foraged pollen mass, pupal population size, and adult population size change). Methods: We collected detailed colony measurements on over 450 honey bee colonies over four years across an agricultural-to-forested land use gradient in Michigan, USA. Results: We found that higher than normal precipitation in the preceding spring and fall was negatively correlated with colony size change and with foraged nectar mass, respectively. Sites surrounded by less agricultural land and more forested land also had fewer pupae by the end of summer. Conclusions: These inter-dependent colony metrics offer insights into environmental-plant-pollinator dynamics. Our finding that extreme weather events, associated with climate change, are negatively correlated with colony performance point to likely lagged effects of weather on pollinator floral resources. Landscapes managed with climate-resilient, temporally continuous floral resources are likely to support pollinators. Capturing extreme weather phenomena in field studies is a valuable way to investigate the associations between land use, climate change and biological systems. However, caution should be taken in overinterpreting observational studies, so further research is needed.

Landscape Ecology

Improving the Midwest Climate Change Vulnerability Assessment Tool to support regional climate adaptation

An online climate vulnerability assessment dashboard was developed in 2021 through collaboration between U.S. Geological Survey (USGS) and U.S. Fish and Wildlife Service (FWS) to support regional climate adaptation efforts. The dashboard included 15 climate change impact metrics (five each from three categories: hydrology, precipitation, and temperature) and five metrics representing each watershed's capacity to adapt to changing conditions. Users could then adjust relative weights of each metric to generate vulnerability scores. The metrics included in the dashboard were identified by FWS for their programs but have broad relevance, making the dashboard useful to a wide range of stakeholders. For this project we had two primary goals: (1) update the online dashboard to better communicate the variability that is inherent in climate change projections, and (2) develop a use case example using the dashboard to collaboratively assess vulnerability of a resource of concern at a workshop with resource managers. For objective 2, we selected prairie-obligate butterflies (POBs), which are dependent on, and often restricted to, native prairie habitat. The extent of native prairie has been greatly reduced over the last two centuries resulting in a patchwork of isolated and often small tracts of land. For many POBs, declines and extirpations have been observed in recent decades. Although the causes are not always known, hypotheses include overuse of management tools (e.g., too frequent burning or overgrazing), lack of dispersal opportunities, or extreme weather events. With more extreme weather events anticipated in the future along with other changes in climate, it is important to better understand the vulnerability of POBs to design effective adaptation strategies. While research on extreme weather, climate change, and adaptation is ongoing for some prairie-obligate species, this workshop sought to take a broad perspective using POBs as the focal taxonomic group across eight U.S. States in the Midwest During the workshop we discussed weather and climate-related influences on butterfly communities and assessed climate change vulnerability using the Watershed-based Midwest Climate Change Vulnerability Assessment Tool (https://www.usgs.gov/apps/CC_Vulnerability/). We produced maps that quantify the regional vulnerability of POBs across 360 watersheds for two future emissions scenarios. The information developed during the workshop could help in regional planning for climate change adaptation and to identify avenues for research and collaboration for POBs in the Midwest.

Illinois, Indiana, Iowa, Michigan, Minnesota, Miss

The importance of range edges for an irruptive species during extreme weather events

Context Threats to wildlife species from extreme events, such as droughts, are predicted to increase in frequency and magnitude with climate change. Extreme events can cause mortality and community-level changes, but for some mobile species, movement away from areas affected may be a viable option. Objectives We examined the effect of extreme weather on spatial patterns of abundance for an irruptive grassland bird species, the Dickcissel ( Spiza americana ). Methods We calculated route-level annual abundances and abundance anomalies from 1980 to 2012 from North American Breeding Bird Survey data, and classified the Dickcissel&rsquo;s range into core and edge regions using these abundances. We then compared abundances in the core and edge regions to the standardized precipitation evapotranspiration index, a measure of drought, in linear regressions. Results We found that Dickcissel irruptions in the northern range edges were related to drought conditions in the range core, potentially a consequence of birds being &lsquo;pushed&rsquo; to the range edge when weather was unsuitable. Specifically, Dickcissels moved into refuge sites containing a high proportion of cultivated crops, with higher vegetation greenness, than those areas they leave during drought years. Conclusions In a changing climate where more frequent extreme weather may be more common, conservation strategies for weather-sensitive species may require consideration of habitat in the edges of species&rsquo; ranges, even though non-core areas may be unoccupied in &lsquo;normal&rsquo; years. Our results highlight the conservation importance of range edges in providing refuge from extreme events, such as drought, and climate change.

Landscape Ecology

Climate and the latitudinal limits of subtropical reef development

Climate plays a central role in coral-reef development, especially in marginal environments. The high-latitude reefs of southeast Florida are currently non-accreting, relict systems with low coral cover. This region also did not support the extensive Late Pleistocene reef development observed in many other locations around the world; however, there is evidence of significant reef building in southeast Florida during the Holocene. Using 146 radiometric ages from reefs extending ~ 120 km along Florida’s southeast coast, we test the hypothesis that the latitudinal extent of Holocene reef development in this region was modulated by climatic variability. We demonstrate that although sea-level changes impacted rates of reef accretion and allowed reefs to backstep inshore as new habitats were flooded, sea level was not the ultimate cause of reef demise. Instead, we conclude that climate was the primary driver of the expansion and contraction of Florida’s reefs during the Holocene. Reefs grew to 26.7° N in southeast Florida during the relatively warm, stable climate at the beginning of the Holocene Thermal Maximum (HTM) ~ 10,000 years ago, but subsequent cooling and increased frequency of winter cold fronts were associated with the equatorward contraction of reef building. By ~ 7800 years ago, actively accreting reefs only extended to 26.1° N. Reefs further contracted to 25.8° N after 5800 years ago, and by 3000 years ago reef development had terminated throughout southern Florida (24.5–26.7° N). Modern warming is unlikely to simply reverse this trend, however, because the climate of the Anthropocene will be fundamentally different from the HTM. By increasing the frequency and intensity of both warm and cold extreme-weather events, contemporary climate change will instead amplify conditions inimical to reef development in marginal reef environments such as southern Florida, making them more likely to continue to deteriorate than to resume accretion in the future.

Florida

Landscape transcriptomic analysis detects thermal stress responses and potential adaptive variation in wild brook trout (Salvelinus fontinalis) during successive heatwaves

Extreme weather events, such as heatwaves, are becoming more frequent and intense as a result of climate change. Critically, such extreme weather events can be more important drivers of extirpation and selection than changes in annual or seasonal averages and they pose a particularly large threat to poikilothermic organisms. In this study, we evaluated the transcriptomic response of a coldwater adapted fish species, the eastern brook trout ( Salvelinus fontinalis ), to two successive heatwaves during July and August 2022. We sampled brook trout at eight time points from four streams ( N = 116 fish), sequenced mRNA from gill samples using TagSeq, and quantified expression levels of 32,670 unique transcripts. Multivariate analyses found that overall expression patterns in response to water temperature change were similar among streams. These analyses further detected groups of genes involved in immune response and oxygen carrier activity that were upregulated and downregulated respectively at higher water temperatures. We also detected 43 genes that were differentially expressed at different time points and followed the same expression pattern during the two heatwaves. Of these genes, 42 covaried with water temperature and most (27, 62.8 %) exhibited responses that varied by stream. Some of the differentially expressed genes, including heat shock proteins and cold-inducible RNA binding proteins, have been widely linked to temperature responses in experimental studies, whereas other genes we identified have functions that have not been well-studied in relationship to temperature or have unknown functions. This study shows the utility of landscape transcriptomic approaches to identify important biological processes governing wild organismal responses to short-term stressors. The results of this study can guide future investigations to identify phenotypic and genetic diversity that contribute to adaptive responses to heatwaves and improve predictions of how populations will respond to future climate change.

Pennsylvania

Populations of concern

Climate change is already causing, and is expected to continue to cause, a range of health impacts that vary across different population groups in the United States. The vulnerability of any given group is a function of its sensitivity to climate change related health risks, its exposure to those risks, and its capacity for responding to or coping with climate variability and change. Vulnerable groups of people, described here as populations of concern, include those with low income, some communities of color, immigrant groups (including those with limited English proficiency), Indigenous peoples, children and pregnant women, older adults, vulnerable occupational groups, persons with disabilities, and persons with preexisting or chronic medical conditions. Planners and public health officials, politicians and physicians, scientists and social service providers are tasked with understanding and responding to the health impacts of climate change. Collectively, their characterization of vulnerability should consider how populations of concern experience disproportionate, multiple, and complex risks to their health and well-being in response to climate change. Some groups face a number of stressors related to both climate and non-climate factors. For example, people living in impoverished urban or isolated rural areas, floodplains, coastlines, and other at-risk locations are more vulnerable not only to extreme weather and persistent climate change but also to social and economic stressors. Many of these stressors can occur simultaneously or consecutively. Over time, this “accumulation” of multiple, complex stressors is expected to become more evident1 as climate impacts interact with stressors associated with existing mental and physical health conditions and with other socioeconomic and demographic factors.

Report

Loss and modification of habitat

Amphibians live in a wide variety of habitats around the world, many of which have been modified or destroyed by human activities. Most species have unique life history characteristics adapted to specific climates, habitats (e.g., lentic, lotic, terrestrial, arboreal, fossorial, amphibious), and local conditions that provide suitable areas for reproduction, development and growth, shelter from environmental extremes, and predation, as well as connectivity to other populations or habitats. Although some species are entirely aquatic or terrestrial, most amphibians, as their name implies, lead a dual life and require a mosaic of habitats in both aquatic and terrestrial ecosystems. With over 6 billion people on Earth, most species are now persisting in habitats that have been directly or indirectly influenced by human activities. Some species have disappeared where their habitats have been completely destroyed, reduced, or rendered unsuitable. Habitat loss and degradation are widely considered by most researchers as the most important causes of amphibian population decline globally (Barinaga 1990; Wake and Morowitz 1991; Alford and Richards 1999). In this chapter, a background on the diverse habitat requirements of amphibians is provided, followed by a discussion of the effects of urbanization, agriculture, livestock grazing, timber production and harvesting, fire and hazardous fuel management, and roads on amphibians and their habitats. Also briefly discussed is the influence on amphibian habitats of natural disturbances, such as extreme weather events and climate change, given the potential for human activities to impact climate in the longer term. For amphibians in general, microhabitats are of greater importance than for other vertebrates. As ectotherms with a skin that is permeable to water and with naked gelatinous eggs, amphibians are physiologically constrained to be active during environmental conditions that provide appropriate body temperatures and adequate water balance (Thorson and Svihla 1943; Brattstrom 1963; Tracy 1976). Hence, individuals require and seek specific microhabitats that maintain their preferred body temperature while at the same time reducing water loss or allowing individuals to re-hydrate. Amphibians also possess relatively few physical attributes that protect them from predators. Although they may avoid predators behaviourally or deter them by skin toxins, amphibians lack defensive shells or hardened cuticles, do not have protective teeth or claws, and most are insufficiently fast to escape predators. Hence, they are relatively dependent on sites that conceal or protect them from predation. Most amphibians also differ significantly from other vertebrates in possessing a complex two-phase life cycle: the pre-metamorphic larval (tadpole) stage and the post-metamorphic juvenile and adult stage (Wilbur 1980, 1984). Most amphibian species have two distinct econes (Heatwole 1989), each with different habitat requirements, the larvae being aquatic and the post-metamorphic animals more terrestrial. The habitats required by the two phases can differ greatly, but both are essential to the survival of a species. However, amphibian diversity is great and exceptions to this general pattern exist. For example, some species have direct development without going through a larval stage and are fully terrestrial, whereas the larvae of other species can reach sexual maturity without going through metamorphosis (i.e., neoteny) and are fully aquatic.

Book chapter

Loss and modification of habitat

Amphibians live in a wide variety of habitats around the world, many of which have been modified or destroyed by human activities. Most species have unique life history characteristics adapted to specific climates, habitats (e.g., lentic, lotic, terrestrial, arboreal, fossorial, amphibious), and local conditions that provide suitable areas for reproduction, development and growth, shelter from environmental extremes, and predation, as well as connectivity to other populations or habitats. Although some species are entirely aquatic or terrestrial, most amphibians, as their name implies, lead a dual life and require a mosaic of habitats in both aquatic and terrestrial ecosystems. With over 6 billion people on Earth, most species are now persisting in habitats that have been directly or indirectly influenced by human activities. Some species have disappeared where their habitats have been completely destroyed, reduced, or rendered unsuitable. Habitat loss and degradation are widely considered by most researchers as the most important causes of amphibian population decline globally (Barinaga 1990; Wake and Morowitz 1991; Alford and Richards 1999). In this chapter, a background on the diverse habitat requirements of amphibians is provided, followed by a discussion of the effects of urbanization, agriculture, livestock grazing, timber production and harvesting, fire and hazardous fuel management, and roads on amphibians and their habitats. Also briefly discussed is the influence on amphibian habitats of natural disturbances, such as extreme weather events and climate change, given the potential for human activities to impact climate in the longer term. For amphibians in general, microhabitats are of greater importance than for other vertebrates. As ectotherms with a skin that is permeable to water and with naked gelatinous eggs, amphibians are physiologically constrained to be active during environmental conditions that provide appropriate body temperatures and adequate water balance (Thorson and Svihla 1943; Brattstrom 1963; Tracy 1976). Hence, individuals require and seek specific microhabitats that maintain their preferred body temperature while at the same time reducing water loss or allowing individuals to re-hydrate. Amphibians also possess relatively few physical attributes that protect them from predators. Although they may avoid predators behaviourally or deter them by skin toxins, amphibians lack defensive shells or hardened cuticles, do not have protective teeth or claws, and most are insufficiently fast to escape predators. Hence, they are relatively dependent on sites that conceal or protect them from predation. Most amphibians also differ significantly from other vertebrates in possessing a complex two-phase life cycle: the pre-metamorphic larval (tadpole) stage and the post-metamorphic juvenile and adult stage (Wilbur 1980, 1984). Most amphibian species have two distinct econes (Heatwole 1989), each with different habitat requirements, the larvae being aquatic and the post-metamorphic animals more terrestrial. The habitats required by the two phases can differ greatly, but both are essential to the survival of a species. However, amphibian diversity is great and exceptions to this general pattern exist. For example, some species have direct development without going through a larval stage and are fully terrestrial, whereas the larvae of other species can reach sexual maturity without going through metamorphosis (i.e., neoteny) and are fully aquatic.

Book chapter

Using long-term ecological datasets to unravel the impacts of short-term meteorological disturbances on phytoplankton communities

Extreme meteorological events such as storms are increasing in frequency and intensity, but our knowledge of their impacts on aquatic ecosystems and emergent system properties is limited. Understanding the ecological impacts of storms on the dynamics of primary producers remains a challenge that needs to be addressed to assess the vulnerability of freshwater ecosystems to extreme weather conditions and climate change. One promising approach to gain insights into storm impacts on phytoplankton community dynamics is to analyse long-term monitoring datasets. However, such an approach requires disentangling the impacts of short-term meteorological disturbances from the effects of the seasonal trajectories of meteorological conditions. To this end, we applied boosted regression tree models to phytoplankton time series from eight relatively large lakes on four continents, coupled with a procedure adapted to detect and quantify rare events. Overall, the patterns and potential drivers we identified provide important insights into the responses of lakes to short-term meteorological events and highlight differences in the response of phytoplankton communities according to lake morphological characteristics. Our results indicated that deepened thermoclines and lake-specific combinations of drivers describing altered thermal structures caused deviations from the typical trajectories of seasonal phytoplankton succession. For shallow polymictic lakes, shifts in phytoplankton succession also depended on changes in light availability. Overall, our study highlights the value of long-term monitoring to improve our understanding of phytoplankton sensitivity to short-term meteorological disturbances.

Freshwater Biology