Contributions of Henry Weed Fowler (1878-1965), with a brief early history of ichthyology at the Academy of Natural Sciences of Philadelphia
Abstract not supplied at this time
Proceedings of the Academy of Natural Sciences of ↗
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Browsing the literature
For this edition of Browsing the Literature, we have two new papers from Rangeland Ecology & Management, a series of basic ecology papers with an international scope from journals such as the Proceedings of the National Academy of Sciences (USA), Science, and Nature, and several papers advancing our understanding of drought and carbon at global scales. Additionally, several papers on sagebrush-steppe rangelands are covered with transferable insights to other rangeland types.
Rangelands↗
Capturing patterns of evolutionary relatedness with reflectance spectra to model and monitor biodiversity
Biogeographic history can set initial conditions for vegetation community assemblages that determine their climate responses at broad extents that land surface models attempt to forecast. Numerous studies have indicated that evolutionarily conserved biochemical, structural, and other functional attributes of plant species are captured in visible-to-short wavelength infrared, 400 to 2,500 nm, reflectance properties of vegetation. Here, we present a remotely sensed phylogenetic clustering and an evolutionary framework to accommodate spectra, distributions, and traits. Spectral properties evolutionarily conserved in plants provide the opportunity to spatially aggregate species into lineages (interpreted as “lineage functional types” or LFT) with improved classification accuracy. In this study, we use Airborne Visible/Infrared Imaging Spectrometer data from the 2013 Hyperspectral Infrared Imager campaign over the southern Sierra Nevada, California flight box, to investigate the potential for incorporating evolutionary thinking into landcover classification. We link the airborne hyperspectral data with vegetation plot data from 1372 surveys and a phylogeny representing 1,572 species. Despite temporal and spatial differences in our training data, we classified plant lineages with moderate reliability (Kappa = 0.76) and overall classification accuracy of 80.9%. We present an assessment of classification error and detail study limitations to facilitate future LFT development. This work demonstrates that lineage-based methods may be a promising way to leverage the new-generation high-resolution and high return-interval hyperspectral data planned for the forthcoming satellite missions with sparsely sampled existing ground-based ecological data.
Proceedings of the Natural Academy of Sciences↗
Species within the genus Encyonema Kützing, including two new species Encyonema reimeri sp. nov. and E. nickcafei sp. nov. and E. stoermeri nom. nov., stat. nov
No abstract available.
Proceedings of the Academy of Natural Sciences of ↗
Additions to the ichthyofauna of the Bahama Islands, with comments on endemic species
Literature records or other documentation are given for 57 species of shorefishes added to the Bahaman ichthyofauna since publication of Fishes of the Bahamas ; included are 32 new species described or discovered since 1967. Known distribution is specified for each species, including extralimital ranges of non-endemics. Fourteen species are listed as known only from the Bahamas although some likely occur elsewhere. It is concluded that the Bahamas has played a minor role in the evolution of Atlantic tropical marine fishes. [Bahaman ichthyofauna, endemism, new records]
Proceedings of the Academy of Natural Sciences of ↗
Repeating caldera collapse events constrain fault friction at the kilometer scale
Fault friction is central to understanding earthquakes, yet laboratory rock mechanics experiments are restricted to, at most, meter scale. Questions thus remain as to the applicability of measured frictional properties to faulting in situ. In particular, the slip-weakening distance d c "> d c dc strongly influences precursory slip during earthquake nucleation, but scales with fault roughness and is challenging to extrapolate to nature. The 2018 eruption of K̄ılauea volcano, Hawaii, caused 62 repeatable collapse events in which the summit caldera dropped several meters, accompanied by M W "> M W MW 4.7 to 5.4 very long period (VLP) earthquakes. Collapses were exceptionally well recorded by global positioning system (GPS) and tilt instruments and represent unique natural kilometer-scale friction experiments. We model a piston collapsing into a magma reservoir. Pressure at the piston base and shear stress on its margin, governed by rate and state friction, balance its weight. Downward motion of the piston compresses the underlying magma, driving flow to the eruption. Monte Carlo estimation of unknowns validates laboratory friction parameters at the kilometer scale, including the magnitude of steady-state velocity weakening. The absence of accelerating precollapse deformation constrains d c "> d c dc to be ≤ 10 "> ≤ 10 ≤10 mm, potentially much less. These results support the use of laboratory friction laws and parameters for modeling earthquakes. We identify initial conditions and material and magma-system parameters that lead to episodic caldera collapse, revealing that small differences in eruptive vent elevation can lead to major differences in eruption volume and duration. Most historical basaltic caldera collapses were, at least partly, episodic, implying that the conditions for stick–slip derived here are commonly met in nature.
Hawaii↗
Aquatic insect ecophysiological traits reveal phylogenetically based differences in dissolved cadmium susceptibility
We used a phylogenetically based comparative approach to evaluate the potential for physiological studies to reveal patterns of diversity in traits related to susceptibility to an environmental stressor, the trace metal cadmium (Cd). Physiological traits related to Cd bioaccumulation, compartmentalization, and ultimately susceptibility were measured in 21 aquatic insect species representing the orders Ephemeroptera, Plecoptera, and Trichoptera. We mapped these experimentally derived physiological traits onto a phylogeny and quantified the tendency for related species to be similar (phylogenetic signal). All traits related to Cd bioaccumulation and susceptibility exhibited statistically significant phylogenetic signal, although the signal strength varied among traits. Conventional and phylogenetically based regression models were compared, revealing great variability within orders but consistent, strong differences among insect families. Uptake and elimination rate constants were positively correlated among species, but only when effects of body size and phylogeny were incorporated in the analysis. Together, uptake and elimination rates predicted dramatic Cd bioaccumulation differences among species that agreed with field-based measurements. We discovered a potential tradeoff between the ability to eliminate Cd and the ability to detoxify it across species, particularly mayflies. The best-fit regression models were driven by phylogenetic parameters (especially differences among families) rather than functional traits, suggesting that it may eventually be possible to predict a taxon's physiological performance based on its phylogenetic position, provided adequate physiological information is available for close relatives. There appears to be great potential for evolutionary physiological approaches to augment our understanding of insect responses to environmental stressors in nature. ?? 2008 by The National Academy of Sciences of the USA.
Proceedings of the National Academy of Sciences of↗
Contribution of climate-driven change in continental water storage to recent sea-level rise
Using a global model of continental water balance, forced by interannual variations in precipitation and near-surface atmospheric temperature for the period 1981-1998, we estimate the sea-level changes associated with climate-driven changes in storage of water as snowpack, soil water, and ground water; storage in ice sheets and large lakes is not considered. The 1981-1998 trend is estimated to be 0.12 mm/yr, and substantial interannual fluctuations are inferred; for 1993-1998, the trend is 0.25 mm/yr. At the decadal time scale, the terrestrial contribution to eustatic (i.e., induced by mass exchange) sea-level rise is significantly smaller than the estimated steric (i.e., induced by density changes) trend for the same period, but is not negligibly small. In the model the sea-level rise is driven mainly by a downtrend in continental precipitation during the study period, which we believe was generated by natural variability in the climate system.
Proceedings of the National Academy of Sciences of↗
An introduced and a native vertebrate hybridize to form a genetic bridge to a second native species
The genetic impacts of hybridization between native and introduced species are of considerable conservation concern, while the possibility of reticulate evolution affects our basic understanding of how species arise and shapes how we use genetic data to understand evolutionary diversification. By using mitochondrial NADH dehydrogenase subunit 2 (ND2) sequences and 467 amplified fragment-length polymorphism nuclear DNA markers, we show that the introduced white sucker (Catostomus commersoni) has hybridized with two species native to the Colorado River Basin - the flannelmouth sucker (Catostomus latipinnis) and the bluehead sucker (Catostomus discobolus). Hybrids between the flannelmouth sucker and white sucker have facilitated introgression between the two native species, previously isolated by reproductive barriers, such that individuals exist with contributions from all three genomes. Most hybrids had the mitochondrial haplotype of the introduced white sucker, emphasizing its pivotal role in this three-way hybridization. Our findings highlight how introduced species can threaten the genetic integrity of not only one species but also multiple previously reproductively isolated species. Furthermore, this complex three-way reticulate (as opposed to strictly bifurcating) evolution suggests that seeking examples in other vertebrate systems might be productive. Although the present study involved an introduced species, similar patterns of hybridization could result from natural processes, including stream capture or geological formations (e.g., the Bering land bridge). ?? 2008 by The National Academy of Sciences of the USA.
Proceedings of the National Academy of Sciences of↗
Fluctuating survival selection explains variation in avian group size
Most animal groups vary extensively in size. Because individuals in certain sizes of groups often have higher apparent fitness than those in other groups, why wide group size variation persists in most populations remains unexplained. We used a 30-y mark–recapture study of colonially breeding cliff swallows ( Petrochelidon pyrrhonota ) to show that the survival advantages of different colony sizes fluctuated among years. Colony size was under both stabilizing and directional selection in different years, and reversals in the sign of directional selection regularly occurred. Directional selection was predicted in part by drought conditions: birds in larger colonies tended to be favored in cooler and wetter years, and birds in smaller colonies in hotter and drier years. Oscillating selection on colony size likely reflected annual differences in food availability and the consequent importance of information transfer, and/or the level of ectoparasitism, with the net benefit of sociality varying under these different conditions. Averaged across years, there was no net directional change in selection on colony size. The wide range in cliff swallow group size is probably maintained by fluctuating survival selection and represents the first case, to our knowledge, in which fitness advantages of different group sizes regularly oscillate over time in a natural vertebrate population.
Proceedings of the National Academy of Sciences of↗
Weak support for disappearance and restricted emergence/persistence of highly pathogenic influenza A in North American waterfowl
Krauss et al. (1) use lack of detection of highly pathogenic (HP) H5 clade 2.3.4.4 (henceforth "H5") influenza A viruses (IAVs) from >22,000 wild bird samples collected in North America in 2014–2015 to argue that HP H5 IAVs disappeared from waterfowl and that unresolved mechanisms restrict emergence and perpetuation of HP IAVs in natural reservoir species. Here we offer an alternative interpretation.
Proceedings of the National Academy of Sciences↗
Fire, climate and changing forests
A changing climate implies potential transformations in plant demography, communities, and disturbances such as wildfire and insect outbreaks. How do these dynamics play out in terrestrial ecosystems across scales of space and time? “Vegetation type conversion” (VTC) is a term used to describe abrupt and long-lasting changes in vegetation structure and composition due to various kinds of perturbations. For example, it has long been observed that fire-adapted ecosystems such as the California chaparral shrublands are readily replaced by non-native annual grasses when humans increase fire frequency. Similar effects are being observed in Sonoran Desert plant communities, where invasion by non-native buffelgrass (Cenchrus ciliare) exposes a fire-sensitive plant community to high-intensity fires, which are lethal to the long-lived iconic Sonoran flora such as Saguaro cactus (Carnegiea gigantea). While type conversions following severe disturbance have been observed for some time, the mechanisms that underlay such changes are only recently coming to light. Threshold behavior is of particular concern: as various climate indices pass critical values, some ecosystems may be reaching points of no return where recovery to the earlier state is no longer possible. A recent publication in the Proceedings of the National Academy of Sciences, U.S., has now revealed that increased fire severity impairs post-fire forest regeneration, setting the stage for potential large-scale type conversion of western conifer forests.
Nature Plants↗
A pheromone antagonist liberates female sea lamprey from a sensory trap to enable reliable communication
The evolution of male signals and female preferences remains a central question in the study of animal communication. The sensory trap model suggests males evolve signals that mimic cues used in nonsexual contexts and thus manipulate female behavior to generate mating opportunities. Much evidence supports the sensory trap model, but how females glean reliable information from both mimetic signals and their model cues remains unknown. We discovered a mechanism whereby a manipulative male signal guides reliable communication in sea lamprey ( Petromyzon marinus ). Migratory sea lamprey follow a larval cue into spawning streams; once sexually mature, males release a pheromone that mimics the larval cue and attracts females. Females conceivably benefit from the mimetic pheromone during mate search but must discriminate against the model cue to avoid orienting toward larvae in nearby nursery habitats. We tested the hypothesis that spawning females respond to petromyzonol sulfate (PZS) as a behavioral antagonist to avoid attraction to the larval cue while tracking the male pheromone despite each containing attractive 3-keto petromyzonol sulfate (3kPZS). We found 1) PZS inhibited electrophysiological responses to 3kPZS and abated preferences for 3kPZS when mixed at the same or greater concentrations, 2) larvae released more PZS than 3kPZS whereas males released more 3kPZS than PZS, and 3) mixtures of 3kPZS and PZS applied at ratios measured in larval and male odorants resulted in the discrimination observed between the natural odors. Our study elucidates how communication systems that arise via deception can facilitate reliable communication.
Proceedings of the National Academy of Sciences of↗
Potential for western US seasonal snowpack prediction
Western US snowpack—snow that accumulates on the ground in the mountains—plays a critical role in regional hydroclimate and water supply, with 80% of snowmelt runoff being used for agriculture. While climate projections provide estimates of snowpack loss by the end of th ecentury and weather forecasts provide predictions of weather conditions out to 2 weeks, less progress has been made for snow predictions at seasonal timescales (months to 2 years), crucial for regional agricultural decisions (e.g., plant choice and quantity). Seasonal predictions with climate models first took the form of El Niño predictions 3 decades ago, with hydroclimate predictions emerging more recently. While the field has been focused on single-season predictions (3 months or less), we are now poised to advance our predictions beyond this timeframe. Utilizing observations, climate indices, and a suite of global climate models, we demonstrate the feasibility of seasonal snowpack predictions and quantify the limits of predictive skill 8 month sin advance. This physically based dynamic system outperforms observation-based statistical predictions made on July 1 for March snowpack everywhere except the southern Sierra Nevada, a region where prediction skill is nonexistent for every predictor presently tested. Additionally, in the absence of externally forced negative trends in snowpack, narrow maritime mountain ranges with high hydroclimate variability pose a challenge for seasonal prediction in our present system; natural snowpack variability may inherently be unpredictable at this timescale. This work highlights present prediction system successes and gives cause for optimism for developing seasonal predictions for societal needs.
Proceedings of the National Academy of Sciences of↗
Naturalized species drive functional trait shifts in plant communities
Despite decades of research documenting the consequences of naturalized and invasive plant species on ecosystem functions, our understanding of the functional underpinnings of these changes remains rudimentary. This is partially due to ineffective scaling of trait differences between native and naturalized species to whole plant communities. Working with data from over 75,000 plots and over 5,500 species from across the United States, we show that changes in the functional composition of communities associated with increasing abundance of naturalized species mirror the differences in traits between native and naturalized plants. We find that communities with greater abundance of naturalized species are more resource acquisitive aboveground and belowground, shorter, more shallowly rooted, and increasingly aligned with an independent strategy for belowground resource acquisition via thin fine roots with high specific root length. We observe shifts toward herbaceous-dominated communities but shifts within both woody and herbaceous functional groups follow community-level patterns for most traits. Patterns are remarkably similar across desert, grassland, and forest ecosystems. Our results demonstrate that the establishment and spread of naturalized species, likely in combination with underlying environmental shifts, leads to predictable and consistent changes in community-level traits that can alter ecosystem functions.
Proceedings of the National Academy of Sciences↗
From coseismic offsets to fault-block mountains
In the Basin and Range extensional province of the western United States, coseismic offsets, under the influence of gravity, display predominantly subsidence of the basin side (fault hanging wall), with comparatively little or no uplift of the mountainside (fault footwall). A few decades later, geodetic measurements [GPS and interferometric synthetic aperture radar (InSAR)] show broad (∼100 km) aseismic uplift symmetrically spanning the fault zone. Finally, after millions of years and hundreds of fault offsets, the mountain blocks display large uplift and tilting over a breadth of only about 10 km. These sparse but robust observations pose a problem in that the coesismic uplifts of the footwall are small and inadequate to raise the mountain blocks. To address this paradox we develop finite-element models subjected to extensional and gravitational forces to study time-varying deformation associated with normal faulting. Stretching the model under gravity demonstrates that asymmetric slip via collapse of the hanging wall is a natural consequence of coseismic deformation. Focused flow in the upper mantle imposed by deformation of the lower crust localizes uplift, which is predicted to take place within one to two decades after each large earthquake. Thus, the best-preserved topographic signature of earthquakes is expected to occur early in the postseismic period.
Proceedings of the National Academy of Sciences of↗
Persistence of the longnose darter ( P. nasuta ) in Lee Creek, Oklahoma
The longnose darter Percina nasuta (Bailey) is one of Oklahoma’s rarest fish species (1) and is listed by the state as endangered. Throughout the rest of its range, which includes Missouri, Arkansas and the far eastern portion of Oklahoma, the longnose darter is classified as “rare” or “threatened” (2, 3, 4, 5, 6, 1). This species inhabits both slow- and fast-water habitats with cobble and gravel substrates in medium to large streams (7, 8, 1). Oklahoma populations of longnose darter are known to occur only in the Poteau River and Lee Creek drainages in Le Flore and Sequoyah counties, respectively (9, 10). Cross and Moore (9) collected longnose darters from the Poteau River in 1947. The species was not collected in a subsequent survey of the Poteau River in 1974 (11), possibly because of the effects from the Wister Dam, which was completed in 1949. Darters are especially susceptible to flow alterations from dams (2, 12). This, together with the 1992 completion of Lee Creek Reservoir in Arkansas, has raised concern for the Lee Creek population of longnose darters (13). Lee Creek is one of Oklahoma’s six rivers designated as "scenic" by the Oklahoma Legislature. Lee Creek is located on the Oklahoma-Arkansas border in far eastern Oklahoma. The headwaters originate in northwestern Arkansas and flow south towards the Arkansas River. While the majority of the stream is in Arkansas, a portion flows into Oklahoma northwest of Uniontown, AR and continues for 28.2 river-km before crossing back into Arkansas near Van Buren, AR. The hydrology of lower Lee Creek has been altered by Lee Creek Reservoir near Van Buren, AR. It was believed that pre-impounded Lee Creek had the largest existing population of longnose darters (8). However, the most recent fish surveys in Lee Creek were conducted approximately twenty years ago. Robinson (8) surveyed Lee Creek in Arkansas, upstream of the Oklahoma border, and found longnose darters upstream of Natural Dam, AR. Wagner et al. (10) were the last to document longnose darter presence in the Oklahoma segment of Lee Creek. No efforts to collect this species in Oklahoma have occurred since the completion of Lee Creek Reservoir. Our objective was to determine whether the species persist in this segment of its historic range since impoundment.
Oklahoma↗
Taxonomic evaluation of the three “type” specimens of the fringe-footed shrew, Sorex fimbripes Bachman, 1837 (Mammalia: Soricidae) and recommended nomenclatural status of the name
John Bachman (1837:391) described the “fringe-footed shrew,” Sorex fimbripes Bachman, 1837, in his landmark monograph on the North American Soricidae (Mammalia: Eulipotyphla), in which he recognized 13 uniquely New World species. Characters he attributed to S. fimbripes resulted in its being interpreted as a tiny, semi-aquatic species and contributed to the complexity of its subsequent taxonomic history. The status and location of the holotype, which should aid in resolving questions about the nature of S. fimbripes, instead have added to the confusion. Originally studied by Bachman in South Carolina, the holotype was later thought to have been identified in the Academy of Natural Sciences of Philadelphia (ANSP), and it is currently considered to be in the National Museum of Natural History (USNM), Washington, D.C. To clarify the identity of the species and its holotype, I compared descriptions of the holotype and the ANSP type with the USNM specimen and with eight species of eastern North American shrews. I conclude that the three accounts of S. fimbripes refer to three different specimens and that the holotype was probably destroyed during the American Civil War. Bachman's S. fimbripes was most likely equivalent to S. cinereus Kerr, 1792, S. fontinalis Hollister, 1911, or S. fumeus Miller, 1895, but without the holotype, its identity cannot be determined definitively, and the name is a nomen dubium.
Proceedings of the Biological Society of Washingto↗