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Diversity of anaerobic halophilic microorganisms

Life in the presence of high salt concentrations is compatible with life in the absence of oxygen. Halophilic and halotolerant anaerobic prokaryotes are found both in the archaeal and in the bacterial domain, and they display a great metabolic diversity. Many of the representatives of the Halobacteriales (Archaea), which are generally considered aerobes, have the potential of anaerobic growth. Some can use alternative electron acceptors such as nitrate, fumarate, dimethylsulfoxide or trimethylamine-N-oxide Halobacterium salinarum can also grow fermentatively on L-arginine, and bacteriorhodopsin-containing cells may even grow anaerobically, energized by light. Obligatory anaerobic halophilic methanogenic Archaea also exist. The bacterial domain contains many anaerobic halophiles, including sulfate reducers. There is also a group of specialized obligatory anaerobic Bacteria, phylogenetically clustering in the low G+C branch of the Firmicutes. Most representatives of this group (order Haloanaerobiales , families Haloanaerobiaceae and Halobacteroidaceae ) are fermentative, using a variety of carbohydrates and amino acids. One species combines the potential for anaerobic growth at high salt concentrations with a preference for high temperatures. Others are homoacetogens; Acetohalobium arabaticum can grow anaerobically as a chemolithotroph, producing acetate from hydrogen and CO 2 . The Haloanaerobiales accumulate high concentrations of K + and Cl - in their cytoplasm, thereby showing a strategy of salt adaptation similar to that used by the Halobacteriales . Recently a new representative of the Haloanaerobiales was isolated from bottom sediments of the Dead Sea (strain DSSe1), which grows anaerobically by oxidation of glycerol to acetate and CO 2 while reducing selenate to selenite and elementary selenium. Other electron acceptors supporting anaerobic growth of this strain are nitrate and trimethylamine- N -oxide. The versatility of life at high salt concentrations with respect to the variety of substrates used, the types of dissimilatory metabolism, and the diversity of potential electron acceptors has important implications for the potential for life in hostile environments lacking oxygen and high in salt, implications that may also be relevant to astrobiology.

Proceedings of SPIE

Feature-based and statistical methods for analyzing the Deepwater Horizon oil spill with AVIRIS imagery

The Deepwater Horizon oil spill covered a very large geographical area in the Gulf of Mexico creating potentially serious environmental impacts on both marine life and the coastal shorelines. Knowing the oil's areal extent and thickness as well as denoting different categories of the oil's physical state is important for assessing these impacts. High spectral resolution data in hyperspectral imagery (HSI) sensors such as Airborne Visible and Infrared Imaging Spectrometer (AVIRIS) provide a valuable source of information that can be used for analysis by semi-automatic methods for tracking an oil spill's areal extent, oil thickness, and oil categories. However, the spectral behavior of oil in water is inherently a highly non-linear and variable phenomenon that changes depending on oil thickness and oil/water ratios. For certain oil thicknesses there are well-defined absorption features, whereas for very thin films sometimes there are almost no observable features. Feature-based imaging spectroscopy methods are particularly effective at classifying materials that exhibit specific well-defined spectral absorption features. Statistical methods are effective at classifying materials with spectra that exhibit a considerable amount of variability and that do not necessarily exhibit well-defined spectral absorption features. This study investigates feature-based and statistical methods for analyzing oil spills using hyperspectral imagery. The appropriate use of each approach is investigated and a combined feature-based and statistical method is proposed.

Proceedings of SPIE

Variability of currents and sediment transport on continental shelves: Optical and current meter studies of the bottom boundary layer

The Continental Margin Sediment Dynamics program of the U.S. Geological Survey has been using a variety of optical instruments to monitor water turbidity as part of our studies of sediment transport. Although we suspect that optical devices will eventually be supplanted by more direct measures of suspended sediments, results of several field experiments indicate that for now transmissometers and nephelometers offer the best solution to the problem of long term environmental monitoring in the ocean. The Continental Margin Sediment Dynamics (CMSD) program of the U.S. Geological Survey is structured to investigate those oceanographic and geological processes which influence and control the active transport of sediments and other materials over continental margins. The focus of this program is on active sedimentary processes, the mechanisms which create them, and the effects they produce (see Figure 1 for a diagrammatic depiction). Basically, we design our experiments to investigate (1) transport mechanisms of oceanic sediments and other materials as suspended load and bed load, and (2) relationships of erosion and deposition to the dynamical characteristics of oceanic bottom boundary layers. The purpose of this report is to describe briefly those aspects of equipment and experiments that relate to our study of suspended particulate matter and water turbidity. Much of our understanding of the spatial distribution and temporal variability of suspended sediments depends upon measurements from optical instruments. In this report we describe those instruments and give examples of their use and some results of two field experiments.

Proceedings of SPIE

Early in mission Landsat 9 geometric performance

Landsat 9 (L9) was launched on September 27, 2021, from Vandenberg Space Force Base in California. The U. S. Geological Survey (USGS) released Level-1 data, geometrically orthorectified and radiometrically calibrated imagery in digital numbers that can be scaled to Top-of-Atmosphere reflectance, and Level-2 data, geometrically orthorectified and radiometrically calibrated surface reflectance imagery, to the public on February 10, 2022. From September 27, 2021 to early January of 2022, the satellite and its two instruments, the Operational Land Imager (OLI) and the Thermal Infrared Sensor (TIRS), were in their commissioning phase, updating key radiometric and geometric calibration parameters for both the spacecraft and the instruments. The data acquired during the commissioning phase of the spacecraft and instruments were reprocessed with the newly determined post-launch calibration parameters prior to the releasing of the data to the public. After the public release of the data, the calibration parameters of the sensors and the spacecraft continue to be monitored to ensure the data released to the public is of the same high quality as previous Landsat data products. This paper discusses three key geometric performance aspects of the L9 spacecraft and its instruments during its early mission time frame (September 27, 2021 to June 27, 2022) including geodetic accuracy, geometric accuracy, and within band registration accuracy of the L9 products generated.

SPIE Optics + Photonics 2022 - Conference Proceedi