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Assessing factors affecting the thermal properties of a passive thermal refuge using three-dimensional hydrodynamic flow and transport modeling

Everglades restoration activities may cause changes to temperature and salinity stratification at the Port of the Islands (POI) marina, which could affect its suitability as a cold weather refuge for manatees. To better understand how the Picayune Strand Restoration Project (PSRP) may alter this important resource in Collier County in southwestern Florida, the USGS has developed a three-dimensional hydrodynamic model for the marina and canal system at POI. Empirical data suggest that manatees aggregate at the site during winter because of thermal inversions that provide warmer water near the bottom that appears to only occur in the presence of salinity stratification. To study these phenomena, the environmental fluid dynamics code simulator was used to represent temperature and salinity transport within POI. Boundary inputs were generated using a larger two-dimensional model constructed with the flow and transport in a linked overland-aquifer density-dependent system simulator. Model results for a representative winter period match observed trends in salinity and temperature fluctuations and produce temperature inversions similar to observed values. Modified boundary conditions, representing proposed PSRP alterations, were also tested to examine the possible effect on the salinity stratification and temperature inversion within POI. Results show that during some periods, salinity stratification is reduced resulting in a subsequent reduction in temperature inversion compared with the existing conditions simulation. This may have an effect on POI’s suitability as a passive thermal refuge for manatees and other temperature-sensitive species. Additional testing was completed to determine the important physical relationships affecting POI’s suitability as a refuge.

Florida

Building destruction from waves and surge on the bolivar peninsula during hurricane ike

The Bolivar Peninsula in Texas was severely impacted by Hurricane Ike with strong winds, large waves, widespread inundation, and severe damage. This paper examines the wave and surge climate on Bolivar during the storm and the consequent survival and destruction of buildings. Emphasis is placed on differences between buildings that survived (with varying degrees of damage) and buildings that were completely destroyed. Building elevations are found to be the primary indicator of survival for areas with large waves. Here, buildings that were sufficiently elevated above waves and surge suffered relatively little structural damage, while houses at lower elevations were impacted by large waves and generally completely destroyed. In many areas, the transition from destruction to survival was over a very small elevation range of around 0.5 m. In areas where waves were smaller, survival was possible at much lower elevations. Higher houses that were not inundated still survived, but well-built houses at lower elevations could also survive as the waves were not large enough to cause structural damage. However, the transition height where waves became damaging could not be determined from this study. ?? 2011 American Society of Civil Engineers.

Journal of Waterway, Port, Coastal and Ocean Engin

Simulating effects of highway embankments on estuarine circulation

A two‐dimensional, depth‐averaged, finite‐difference, numerical model was used to simulate tidal circulation and mass transport in the Port Royal Sound, South Carolina, estuarine system. The purpose of the study was to demonstrate the utility of the Surface‐Water, Integrated, Flow and Transport model (SWIFT2D) for evaluating changes in circulation patterns and mass transport caused by highway‐crossing embankments. A model of a subregion of Port Royal Sound including the highway crossings and having a grid size of 61 m (200 ft) was derived from a 183‐m (600‐ft) model of the entire Port Royal Sound estuarine system. The 183‐m model was used to compute boundary‐value data for the 61‐m submodel, which was then used to simulate flow conditions with and without the highway embankments in place. The numerical simulations show that, with the highway embankments in place, mass transport between the Broad River and Battery Creek is reduced and mass transport between the Beaufort River and Battery Creek is increased. The net result is that mass transport into and out of upper Battery Creek is reduced. The presence of the embankments also alters circulation patterns within Battery Creek.

Journal of Waterway, Port, Coastal and Ocean Engin

Effect of wave-enhanced bottom friction on storm-driven circulation in Massachusetts Bay

Massachusetts Bay is a shallow (35 m average depth) semienclosed embayment, roughly 100 ?? 50 km, which opens into the Gulf of Maine at its eastern boundary. Surface waves associated with winter storm winds from the northeast cause large sediment resuspension events, and wave and circulation fields during these events have a quasi-steady response to the wind stress. Coupled wave, circulation, and boundary layer models indicate that wave-enhanced bottom friction has a significant damping effect on storm-driven circulation in Massachusetts Bay. The simulated response exhibits significant three-dimensional structure, but still can be fundamentally understood using idealized models. The depth-integrated momentum balance is dominated by along-bay stress, pressure gradient, and bottom stress. The effective bottom drag coefficient during typical storm conditions is increased by a factor of 2-5 when wave effects are included, but the mean bottom stress is relatively unaffected by wave effects due to a reduction in bottom currents by 30-50%. The vertical mixing is also relatively unaffected by the waves, and the result is that the increased drag causes a nearly depth-independent offset of the vertical current profiles. The alongshore transport in the bay is reduced 10-50%, depending on wind direction.

Cape Cod Bay, Massachussetts Bay

Hydrodynamic forcing and sediment character in Boston Harbor

Calculated annual excess skin friction stress at various locations in Quincy Bay (outer Boston Harbor) was found to be correlated positively with sediment sand content. The correlation was optimized when a critical shear stress (??c) of 0.085 Pa was assumed for the bay. The excess shear stress was correlated negatively with sediment lead (Pb) and polychlorinated biphenyl (PCB) concentrations. These correlations suggest that area surveys of properties like sand content may be sufficient to estimate ??C.

Massachussetts

Factors controlling navigation-channel Shoaling in Laguna Madre, Texas

Shoaling in the Gulf Intracoastal Waterway of Laguna Madre, Tex., is caused primarily by recycling of dredged sediments. Sediment recycling, which is controlled by water depth and location with respect to the predominant wind-driven currents, is minimal where dredged material is placed on tidal flats that are either flooded infrequently or where the water is extremely shallow. In contrast, nearly all of the dredged material placed in open water >1.5 m deep is reworked and either transported back into the channel or dispersed into the surrounding lagoon. A sediment flux analysis incorporating geotechnical properties demonstrated that erosion and not postemplacement compaction caused most sediment losses from the placement areas. Comparing sediment properties in the placement areas and natural lagoon indicated that the remaining dredged material is mostly a residual of initial channel construction. Experimental containment designs (shallow subaqueous mound, submerged levee, and emergent levee) constructed in high-maintenance areas to reduce reworking did not retain large volumes of dredged material. The emergent levee provided the greatest retention potential approximately 2 years after construction.

Journal of Waterway, Port, Coastal and Ocean Engin

Longshore sediment transport rates on a microtidal estuarine beach

Longshore sediment transport rates were estimated on a microtidal estuarine beach in Great South Bay, N.Y., during two dyed sand tracer experiments using a temporal sampling method. Mean onshore wind speeds of 5.8 and 9.9 m/s resulted in root-mean-square wave heights of 0.07 and 0.08 m and wave angles of 3.0 and 10.1, causing transport rates of 0.468 and 0.972 m3/h. Rates were 3.1 to 6.5 times greater than predicted by existing equations using standard coefficients. Greater rates are attributed to the concentration of sediment transport in the energetic swash zone under plunging breakers.

Journal of Waterway, Port, Coastal and Ocean Engin

Estimation of contraction scour in riverbed using SERF

Contraction scour in a firm-clay estuarine riverbed is estimated at an oil-unloading terminal at the Port of Haldia in India, where a scour hole attained a maximum depth greater than 5 m relative to the original bottom. A linear equation for the erosion flux as a function of the excess bed shear stress was semicalibrated in a rotating-cylinder device called SERF (Simulator of Erosion Rate Function) and coupled to a hydrodynamic code to simulate the hole as a clear-water scour process. SERF, whose essential design is based on previous such devices, additionally included a load cell for in situ and rapid measurement of the eroded sediment mass. Based on SERF's performance and the degree of comparison between measured and simulated hole geometry, it appears that this device holds promise as a simple tool for prediction of scour in firm-clay beds. ?? ASCE.

Journal of Waterway, Port, Coastal and Ocean Engin

One-dimensional wave bottom boundary layer model comparison: Specific eddy viscosity and turbulence closure models

Six one-dimensional-vertical wave bottom boundary layer models are analyzed based on different methods for estimating the turbulent eddy viscosity: Laminar, linear, parabolic, k —one equation turbulence closure, k−ε —two equation turbulence closure, and k−ω —two equation turbulence closure. Resultant velocity profiles, bed shear stresses, and turbulent kinetic energy are compared to laboratory data of oscillatory flow over smooth and rough beds. Bed shear stress estimates for the smooth bed case were most closely predicted by the k−ω model. Normalized errors between model predictions and measurements of velocity profiles over the entire computational domain collected at 15° intervals for one-half a wave cycle show that overall the linear model was most accurate. The least accurate were the laminar and k−ε models. Normalized errors between model predictions and turbulence kinetic energy profiles showed that the k−ω model was most accurate. Based on these findings, when the smallest overall velocity profile prediction error is required, the processing requirements and error analysis suggest that the linear eddy viscosity model is adequate. However, if accurate estimates of bed shear stress and TKE are required then, of the models tested, the k−ω model should be used.

Journal of Waterway, Port, Coastal and Ocean Engin

Process-based coastal erosion modeling for Drew Point (North Slope, Alaska)

A predictive, coastal erosion/shoreline change model has been developed for a small coastal segment near Drew Point, Beaufort Sea, Alaska. This coastal setting has experienced a dramatic increase in erosion since the early 2000’s. The bluffs at this site are 3-4 m tall and consist of ice-wedge bounded blocks of fine-grained sediments cemented by ice-rich permafrost and capped with a thin organic layer. The bluffs are typically fronted by a narrow ( ∼ 5 m wide) beach or none at all. During a storm surge, the sea contacts the base of the bluff and a niche is formed through thermal and mechanical erosion. The niche grows both vertically and laterally and eventually undermines the bluff, leading to block failure or collapse. The fallen block is then eroded both thermally and mechanically by waves and currents, which must occur before a new niche forming episode may begin. The erosion model explicitly accounts for and integrates a number of these processes including: (1) storm surge generation resulting from wind and atmospheric forcing, (2) erosional niche growth resulting from wave-induced turbulent heat transfer and sediment transport (using the Kobayashi niche erosion model), and (3) thermal and mechanical erosion of the fallen block. The model was calibrated with historic shoreline change data for one time period (1979-2002), and validated with a later time period (2002-2007).

Alaska

Incorporating water quality analysis into navigation assessments as demonstrated in the Mississippi River Basin

A description of historical and ambient water quality conditions is often required as part of navigational studies. This paper describes a series of tools developed by the USGS that can aid navigation managers in developing water quality assessments. The tools use R, a statistical software program, and provide methods to retrieve historical streamflow and water quality data, summarize observations, model concentrations and fluxes, and estimate seasonal, annual, and decadal trends. The utility of these tools is demonstrated by providing an analysis of the seasonal variability and long-term trends of nitrate plus nitrite, orthophosphate, and suspended sediment concentrations and fluxes at nine sites in the Mississippi River Basin. Trends in annual mean concentration and flux showed fairly stable nitrate plus nitrite at most of the nine sites, with increases in the Upper Mississippi and Missouri Rivers and decreases on the Illinois River over a 40-year period beginning in 1980. Orthophosphate concentration or flux increased at almost all sites over a similar time period. Conversely, a concurrent steady decline in suspended sediment concentrations and fluxes was noted at sites throughout the basin.

Mississippi River Basin

Numerical simulation of the boundary layer flow generated in Monterey Bay, California by the 2010 Chilean tsunami: Case study

This work presents a case study involving the numerical simulation of the unsteady boundary layer generated by the 2010 Chilean tsunami, as measured by field equipment in Monterey Bay, California, USA. A one-dimensional vertical (1DV) boundary layer model is utilized, solving Reynolds-averaged Navier–Stokes equations, coupled with two-equation k – ω turbulence closure. Local effects of convective acceleration (converging–diverging effects) on the boundary layer due to the sloping bed are likewise approximated. Four cases are considered involving simulation of: (1) the long tsunami-induced boundary layer flow in isolation, in combination with either (2) convective acceleration effects or (3) energetic short wind waves, and, finally, (4) all effects combined. Reasonable agreement with field measurements is achieved, with model results similarly showing that the tsunami-induced boundary layer in this case only spans a fraction of the local water depth. Systematic comparison of the various cases likewise elucidates the likely significance of both local converging–diverging effects, as well as interaction with the much shorter period wind waves, on the tsunami-generated boundary layer. In the latter case, analogy is drawn to well-known wave–current boundary layer interaction, with the boundary layer turbulence associated with the short wind waves inducing an effective wave roughness felt by the tsunami-induced flow, which effectively plays the role of the current.

California

Advances in morphodynamic modeling of coastal barriers: A review

As scientific understanding of barrier morphodynamics has improved, so has the ability to reproduce observed phenomena and predict future barrier states using mathematical models. To use existing models effectively and improve them, it is important to understand the current state of morphodynamic modeling and the progress that has been made in the field. This manuscript offers a review of the literature regarding advancements in morphodynamic modeling of coastal barrier systems and summarizes current modeling abilities and limitations. Broadly, this review covers both event-scale and long-term morphodynamics. Each of these sections begins with an overview of commonly modeled phenomena and processes, followed by a review of modeling developments. After summarizing the advancements toward the stated modeling goals, we identify research gaps and suggestions for future research under the broad categories of improving our abilities to acquire and access data, furthering our scientific understanding of relevant processes, and advancing our modeling frameworks and approaches.

Virginia

Mitigating flood risks in urban estuaries: Tidal dynamics, shoreline hardening, nature-based solutions, and floodgates in San Francisco Bay

Hydrodynamic models are valuable tools for understanding the primary factors influencing daily and peak water levels and for guiding discussions on potential adaptation strategies for managing flood risk in coastal areas. This analysis uses the Delft3D San Francisco Bay-Delta Community Model to simulate water levels and incorporates the effects of a number of adaptation measures in the urban San Francisco Bay estuary, California. In particular, we examine the influence of shoreline hardening, nature-based solutions, and subregional floodgates on regional water levels. The result shows that under present conditions, tidal amplification is responsible for generating a wide distribution of extreme water levels across San Francisco Bay. Tidal amplification is found to decrease under sea level rise, thereby producing a relative damping effect on extremes. A comparison of different shoreline scenarios demonstrates that hard frontal shorelines result in higher tidal amplification, whereas restored (soft) shorelines lower amplification. The current shoreline configuration has both hard and soft characteristics and results in an intermediate tidal response. In some areas, wetland restoration reduces extreme water levels by as much as 20 cm, whereas hard-shoreline addition elevates them by as much as 10 cm for 1.5 m of sea level rise. Furthermore, local floodgates can significantly reduce high water levels without major adverse effects elsewhere in San Francisco Bay. These findings point toward the justification for a range of adaptive measures across political boundaries, weighing hard and soft options in addressing the mounting danger of sea level rise.

California

A process-based model for forecasting wave runup along the coast of Georgia

Wave runup is an important nearshore process that impacts total water level, sediment transport, and coastal design. Current methods for forecasting wave runup implement an empirical model that considers offshore wave height, wave period, and generalized beach slope. In this study, the authors generated wave runup forecasts from offshore wave conditions and a system of polynomial equations derived from numerical simulations at three different still water datums for each beach profile. They developed a process-based methodology that incorporated site-specific cross-shore topobathy into the phase-resolving numerical model. A comparison between the system of equations, deterministic hydrodynamic simulations, and observed high-water marks was made using Hurricanes Matthew (2016) and Irma (2017) for 12 cases, and it showed that the polynomials were capable of being consistent with the results from full simulation runs, while not requiring hours of runtime when a forecast was needed—the differences between the polynomial and the observed high water marks ranged from 3 to 32 cm for the Irma hindcast and 9–70 cm for Matthew. Then, using forcings from Hurricanes Ian and Nicole (2022), the model predicted the occurrence of dune collision, overwash, and inundation for the coast of Georgia and suggested that wave runup was impacted by the still water level and local topobathy.

Georgia