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USGS2014

Development of a portable active long-path differential optical absorption spectroscopy system for volcanic gas measurements

Active long-path differential optical absorption spectroscopy (LP-DOAS) has been an effective tool for measuring atmospheric trace gases for several decades. However, instruments were large, heavy and power-inefficient, making their application to remote environments extremely challenging. Recent developments in fibre-coupling telescope technology and the availability of ultraviolet light emitting diodes (UV-LEDS) have now allowed us to design and construct a lightweight, portable, low-power LP-DOAS instrument for use at remote locations and specifically for measuring degassing from active volcanic systems. The LP-DOAS was used to measure sulfur dioxide (SO 2 ) emissions from La Fossa crater, Vulcano, Italy, where column densities of up to 1.2 × 10 18 molec cm −2 (~ 500 ppmm) were detected along open paths of up to 400 m in total length. The instrument's SO 2 detection limit was determined to be 2 × 10 16 molec cm −2 (~ 8 ppmm), thereby making quantitative detection of even trace amounts of SO 2 possible. The instrument is capable of measuring other volcanic volatile species as well. Though the spectral evaluation of the recorded data showed that chlorine monoxide (ClO) and carbon disulfide (CS 2 ) were both below the instrument's detection limits during the experiment, the upper limits for the X / SO 2 ratio (X = ClO, CS 2 ) could be derived, and yielded 2 × 10 −3 and 0.1, respectively. The robust design and versatility of the instrument make it a promising tool for monitoring of volcanic degassing and understanding processes in a range of volcanic systems.

Vulcano↗

USGS1990

Sediment movement along the U.S. east coast continental shelf-I. Estimates of bottom stress using the Grant-Madsen model and near-bottom wave and current measurements

Bottom stress is calculated for several long-term time-series observations, made on the U.S. east coast continental shelf during winter, using the wave-current interaction and moveable bed models of Grant and Madsen (1979, Journal of Geophysical Research, 84, 1797-1808; 1982, Journal of Geophysical Research, 87, 469-482). The wave and current measurements were obtained by means of a bottom tripod system which measured current using a Savonius rotor and vane and waves by means of a pressure sensor. The variables were burst sampled about 10% of the time. Wave energy was reasonably resolved, although aliased by wave groupiness, and wave period was accurate to 1-2 s during large storms. Errors in current speed and direction depend on the speed of the mean current relative to the wave current. In general, errors in bottom stress caused by uncertainties in measured current speed and wave characteristics were 10-20%. During storms, the bottom stress calculated using the Grant-Madsen models exceeded stress computed from conventional drag laws by a factor of about 1.5 on average and 3 or more during storm peaks. Thus, even in water as deep as 80 m, oscillatory near-bottom currents associated with surface gravity waves of period 12 s or longer will contribute substantially to bottom stress. Given that the Grant-Madsen model is correct, parameterizations of bottom stress that do not incorporate wave effects will substantially underestimate stress and sediment transport in this region of the continental shelf.

Georges Bank, Mid-Atlantic Bight↗

USGS2018

Full-range, solar-reflected hyperspectral microscopy to support earth remote sensing research

Over the past 20 years, hyperspectral microscopy has grown into a robust field of analysis for a number of applications. The visible to near-infrared (VNIR; 400 to 1000 nm) region of the spectrum has demonstrated utility for the characterization of healthy and diseased tissue and of biomolecular indicators at the cellular level. Here, we describe the development of a hyperspectral imaging (HSI) microscope that is aimed at material characterization to complement traditional stand-off, earth remote sensing with hyperspectral sensors. We combine commercial off the shelf technology to build an HSI microscope to collect spectral data with illumination provided by a tunable laser. Hyperspectral imaging microscopy (HIM) facilitates detailed examination of target materials at the subcentimeter spatial scale. The custom-built, laser illumination HSI microscope covers the NIR to shortwave infrared (NIR/SWIR; 900 to 2500 nm) solar-reflected spectral range. It is combined with a separate VNIR sensor (400 to 900 nm) that utilizes quartz–tungsten–halogen lamps for illumination. The combined sensors provide a means to collect <10,000 s of spectra in the full VNIR/SWIR spectral range from both pure substances and precisely engineered linear and nonlinear mixtures. The large abundance of spectra allows for a more detailed understanding of the variability and multivariate probability distributions of spectral signatures. This additional information aids in understanding the variability observed in ground truth spectra collected from portable spectrometers, and it greatly enhances sample description and metadata content. In addition, HIM data cubes can serve as proxies, as “microscenes,” for systems engineering applications such as trade studies for HSI acquired by air- and space-borne sensors.

Journal of Applied Remote Sensing↗

USGS2013

Field calibration and validation of remote-sensing surveys

The Optical Collection Suite (OCS) is a ground-truth sampling system designed to perform in situ measurements that help calibrate and validate optical remote-sensing and swath-sonar surveys for mapping and monitoring coastal ecosystems and ocean planning. The OCS system enables researchers to collect underwater imagery with real-time feedback, measure the spectral response, and quantify the water clarity with simple and relatively inexpensive instruments that can be hand-deployed from a small vessel. This article reviews the design and performance of the system, based on operational and logistical considerations, as well as the data requirements to support a number of coastal science and management projects. The OCS system has been operational since 2009 and has been used in several ground-truth missions that overlapped with airborne lidar bathymetry (ALB), hyperspectral imagery (HSI), and swath-sonar bathymetric surveys in the Gulf of Maine, southwest Alaska, and the US Virgin Islands (USVI). Research projects that have used the system include a comparison of backscatter intensity derived from acoustic (multibeam/interferometric sonars) versus active optical (ALB) sensors, ALB bottom detection, and seafloor characterization using HSI and ALB.

Alaska↗

USGS2020

Using thermal infrared cameras to detect avian chicks at various distances and vegetative coverages

Population monitoring of nesting waterbirds often involves frequent entries into the colony, but alternative methods such as local remotely sensed thermal imaging may help reduce disturbance while providing a cost-effective way to survey breeding populations. Such an approach can have high initial costs, however, which may have reduced the number of studies investigating functionality of paired thermal infrared camera and small unmanned aerial systems. Here, we take the first step of exploring the ability of two thermal infrared cameras to detect an avian chick under varying vegetative cover and distances, preceding field-mounting applications on a small unmanned aerial system. We created seven “bioboxes” to simulate a range of natural vegetation types and densities for a globally important colonial ground-nesting waterbird species, the common tern Sterna hirundo . We placed a juvenile chicken Gallus gallus (surrogate for the locally endangered common tern) in each box, and we tested two market-accessible infrared cameras (produced by FLIR Systems and Infrared Cameras, Inc.) at five elevations using a stationary boom (maximum height = 12 m). We applied computer-based digital thresholding to collected images, identifying pixels meeting one of seven threshold values. The chick was visible from at least one threshold value in 19 and 31 of 35 processed by the FLIR Systems and Infrared Cameras, respectively. Percentage of the chick identified across thresholds was generally highest at lower threshold values and elevations and decreased as elevation and threshold increased; however, the relative importance of each variable changed dramatically across bioboxes and camera types. Ability to detect a chick from processed images generally decreased with increasing elevation, and although we made no quantitative comparisons among boxes, detectability appeared greatest in images from both cameras when little or no vegetation was present. Interestingly, no single threshold value was best for all bioboxes. We observed notable differences between cameras including visual resolution of detected temperature differentials and image processing speed. Results of this controlled study show promise for the use of thermal infrared systems for detecting cryptic species in vegetation. Future research should work to combine thermal infrared and visual sensors with small unmanned aerial systems to test applicability in a mobile field application.

Journal of Fish and Wildlife Management↗

USGS2020

Effects of a temperature rise on melatonin and thyroid hormones during smoltification of Atlantic salmon, Salmo salar

Smoltification prepares juvenile Atlantic salmon ( Salmo salar ) for downstream migration. Dramatic changes characterize this crucial event in the salmon’s life cycle, including increased gill Na + /K + -ATPase activity (NKA) and plasma hormone levels. The triggering of smoltification relies on photoperiod and is modulated by temperature. Both provide reliable information, to which fish have adapted for thousands of years, that allows deciphering daily and calendar time. Here we studied the impact of different photoperiod (natural, sustained winter solstice) and temperature (natural, ~ + 4° C) combinations, on gill NKA, plasma free triiodothyronine (T3) and thyroxine (T4), and melatonin (MEL; the time-keeping hormone), throughout smoltification. We also studied the impact of temperature history on pineal gland MEL production in vitro. The spring increase in gill NKA was less pronounced in smolts kept under sustained winter photoperiod and/or elevated temperature. Plasma thyroid hormone levels displayed day–night variations, which were affected by elevated temperature, either independently from photoperiod (decrease in T3 levels) or under natural photoperiod exclusively (increase in T4 nocturnal levels). Nocturnal MEL secretion was potentiated by the elevated temperature, which also altered the MEL profile under sustained winter photoperiod. Temperature also affected pineal MEL production in vitro, a response that depended on previous environmental acclimation of the organ. The results support the view that the salmon pineal is a photoperiod and temperature sensor, highlight the complexity of the interaction of these environmental factors on the endocrine system of S. salar , and indicate that climate change might compromise salmon’s time “deciphering” during smoltification, downstream migration and seawater residence.

Journal of Comparative Physiology B: Biochemical, ↗

USGS1989

Investigations of SPOT cartographic applications in the U.S. Geological Survey

The US Geological Survey has a longstanding commitment to the advancement of the technology and applications of remotely sensed data from civilian satellite systems. In the past, research based on satellite data was primarily directed toward natural resource and land use applications rather than cartographic applications. The availability of high-resolution, steroscopic data from the sensors on SPOT provides new opportunities for cartographic applications. The potential applications include production of satellite image and topographic maps, and generation of digital elevation data.

CISM Journal ACSGC↗

USGS2014

Terrestrial reference standard sites for postlaunch sensor calibration

In an era when the number of Earth observation satellites is rapidly growing and measurements from satellite sensors are used to address increasingly urgent global issues, often through synergistic and operational combinations of data from multiple sources, it is imperative that scientists and decision-makers are able to rely on the accuracy of Earth observation data products. The characterization and calibration of these sensors, particularly their relative biases, are vital to the success of the developing integrated Global Earth Observation System of Systems (GEOSS) for coordinated and sustained observations of the Earth. This can only reliably be achieved in the postlaunch environment through the careful use of observations by multiple sensor systems over common, well-characterized terrestrial targets (i.e., on or near the Earth's surface). Through greater access to and understanding of these vital reference standard sites and their use, the validity and utility of information gained from Earth remote sensing will continue to improve. This paper provides a brief overview of the use of reference standard sites for postlaunch sensor radiometric calibration from historical, current, and future perspectives. Emphasis is placed on optical sensors operating in the visible, near-infrared, and shortwave infrared spectral regions.

Canadian Journal of Remote Sensing↗

USGS2016

Towards establishing compact imaging spectrometer standards

Remote sensing science is currently undergoing a tremendous expansion in the area of hyperspectral imaging (HSI) technology. Spurred largely by the explosive growth of Unmanned Aerial Vehicles (UAV), sometimes called Unmanned Aircraft Systems (UAS), or drones, HSI capabilities that once required access to one of only a handful of very specialized and expensive sensor systems are now miniaturized and widely available commercially. Small compact imaging spectrometers (CIS) now on the market offer a number of hyperspectral imaging capabilities in terms of spectral range and sampling. The potential uses of HSI/CIS on UAVs/UASs seem limitless. However, the rapid expansion of unmanned aircraft and small hyperspectral sensor capabilities has created a number of questions related to technological, legal, and operational capabilities. Lightweight sensor systems suitable for UAV platforms are being advertised in the trade literature at an ever-expanding rate with no standardization of system performance specifications or terms of reference. To address this issue, both the U.S. Geological Survey and the National Institute of Standards and Technology are eveloping draft standards to meet these issues. This paper presents the outline of a combined USGS/NIST cooperative strategy to develop and test a characterization methodology to meet the needs of a new and expanding UAV/CIS/HSI user community.

International Journal of Experimental Spectroscopi↗

USGS1996

Preflight and in-flight calibration plan for ASTER

Preflight and in-flight radiometric calibration plans are described for the Advanced Spaceborne Thermal Emission and Reflection Radiometer (ASTER) that is a multispectral optical imager of high spatial resolution. It is designed for the remote sensing from orbit of land surfaces and clouds, and is expected to be launched in 1998 on NASA's EOS AM-I spacecraft. ASTER acquires images in three separate spectral regions, the visible and near-infrared (VNIR), the shortwave infrared (SWIR), and the thermal infrared (TIR) with three imaging radiometer subsystems. The absolute radiometric accuracy is required to be better than 4% for VNIR and SWIR radiance measurements and 1 to 3 K, depending on the temperature regions from 200 to 370 K, for TIR temperature measurements. A reference beam is introduced at the entrance pupil of each imaging radiometer to provide the in-flight calibration. Thus, the ASTER instrument includes internal onboard calibration units that comprise incandescent lamps for the VNIR and SWIR and a blackbody radiator for the TIR as reference sources. The calibration reliability of the VNIR and SWIR is enhanced by a dual system of onboard calibration units as well as by high-stability halogen lamps. A ground calibration system of spectral radiances traceable to fixed-point blackbodies is used for the preflight VNIR and SWIR calibration. Because of the possibility of nonuniform contamination effects on the partial-aperture onboard calibration, it is desirable to check their results with respect to other methods. Reflectance- and radiance-based vicarious methods have been developed for this purpose. These, and methods involving in-flight cross-calibration with other sensors are also described.

Journal of Atmospheric and Oceanic Technology↗

USGS2005

DUCKS: Low cost thermal monitoring units for near-vent deployment

During 1999 we designed and tested a thermal monitoring system to provide a cheap, robust, modular, real-time system capable of surviving the hostile conditions encountered proximal to active volcanic vents. In November 2000 the first system was deployed at Pu'u 'O'o (Kilauea, Hawai'i) to target persistently active vents. Aside from some minor problems, such as sensor damage due to tampering, this system remained operational until January 2004. The success of the prototype system led us to use the blueprint for a second installation at Stromboli (Aeolian Islands, Italy). This was deployed, dug into a bomb-proof bunker, during May 2002 and survived the April 2003 paroxysmal eruption despite being located just 250 m from the vent. In both cases, careful waterproofing of connectors and selection of suitable protection has prevented water damage and corrosion in the harsh atmosphere encountered at the crater rim. The Pu'u 'O'o system cost ∼US$10,000 and comprises four modules: sensors, transmission and power hub, repeater station and reception site. The sensor component consists of three thermal infrared thermometers housed in Pelican™ cases fitted with Germanium–Arsenide–Selenium windows. Two 1° field of view (FOV) sensors allow specific vents to be targeted and a 60° FOV sensor provides a crater floor overview. A hard wire connection links to a Pelican™-case-housed microprocessor , modem and power module. From here data are transmitted, via a repeater site, to a dedicated PC at the Hawaiian Volcano Observatory . Here data are displayed with a delay of ∼3 s between acquisition and display. The modular design allows for great flexibility. At Stromboli, 1° and 15° FOV sensor modules can be switched depending changes in activity style and crater geometry. In addition a direct line of site to the Stromboli reception center negates the repeater site requirement, reducing the cost to US$5500 for a single sensor system. We have also constructed self-contained units with internal data loggers for US$1500/unit. These have been tested at Kilauea, Stromboli, Etna, Masaya, Santiaguito, Fuego, Pacaya, Poas, Soufriere Hills, Villarrica and Erta Ale. These instruments have proved capable of detecting thermal signals associated with: (1) gas emission; (2) gas jetting events; (3) crater floor collapse; (4) lava effusion; (5) lava flow in tubes; (6) lava lake activity; (7) lava dome activity; and (8) crater lake skin temperature.

Journal of Volcanology and Geothermal Research↗

USGS2014

Advances in a distributed approach for ocean model data interoperability

An infrastructure for earth science data is emerging across the globe based on common data models and web services. As we evolve from custom file formats and web sites to standards-based web services and tools, data is becoming easier to distribute, find and retrieve, leaving more time for science. We describe recent advances that make it easier for ocean model providers to share their data, and for users to search, access, analyze and visualize ocean data using MATLAB® and Python®. These include a technique for modelers to create aggregated, Climate and Forecast (CF) metadata convention datasets from collections of non-standard Network Common Data Form (NetCDF) output files, the capability to remotely access data from CF-1.6-compliant NetCDF files using the Open Geospatial Consortium (OGC) Sensor Observation Service (SOS), a metadata standard for unstructured grid model output (UGRID), and tools that utilize both CF and UGRID standards to allow interoperable data search, browse and access. We use examples from the U.S. Integrated Ocean Observing System (IOOS®) Coastal and Ocean Modeling Testbed, a project in which modelers using both structured and unstructured grid model output needed to share their results, to compare their results with other models, and to compare models with observed data. The same techniques used here for ocean modeling output can be applied to atmospheric and climate model output, remote sensing data, digital terrain and bathymetric data.

Journal of Marine Science and Engineering↗

USGS2023

The new Self Anchored Suspension (SAS) Bridge of the San Francisco Bay Bridge System: A preliminary study of its response and behavior during a small earthquake

Seismic behavior and performance of the new Self- Anchored Suspension (SAS) Bridge of the San Francisco Bay Bridge System is studied using response data recorded during the October 14, 2019, 𝑀𝑤⁢4.6 Pleasant Hill earthquake. The new bridge went into service within the last decade as a replacement for the older truss bridge that spanned between Yerba Buena Island and East Bay. During the October 19, 1989, M6.9 Loma Prieta earthquake, which occurred ∼100 km away from the Bay Bridge, a section of the upper deck of the old truss bridge fell onto the lower deck—thus closing this important lifeline between San Francisco and East Bay. The new SAS Bridge (as well as the rest of the Bay Bridge) is instrumented by the California Strong Motion Instrumentation Program (CSMIP). The unique SAS Bridge is suspended by a single tower that is pivotal in trafficking the cable and hanger system to support the eastbound (E) and westbound (W) decks. At both the west and east ends of the SAS, there is a hinge system that connects the W and E decks to the skyways leading to highways. For the west side, the SAS is led to a tunnel at Yerba Buena Island. The response data analyses highlight the complex and yet identifiable coupled response of the deck, tower, and cable system. Using system identification methods including spectral analyses of both acceleration and displacement time history data, the fundamental frequencies (periods) and critical damping percentages are extracted for the main components (tower, deck, and cables) of the bridge where the sensors are deployed. Frequencies (periods) are then compared with the values computed during the design and analysis process of the bridge. The analyses in this paper showed that there is strong evidence of a beating effect attributed to low critical damping percentages and coupled modes. A possible correlation of fundamental periods of such suspension bridges with their span lengths is discussed. The beating effect and period versus span length can be significant topics for further research.

California↗

USGS2013

Operational evapotranspiration mapping using remote sensing and weather datasets: A new parameterization for the SSEB approach

The increasing availability of multi-scale remotely sensed data and global weather datasets is allowing the estimation of evapotranspiration (ET) at multiple scales. We present a simple but robust method that uses remotely sensed thermal data and model-assimilated weather fields to produce ET for the contiguous United States (CONUS) at monthly and seasonal time scales. The method is based on the Simplified Surface Energy Balance (SSEB) model, which is now parameterized for operational applications, renamed as SSEBop. The innovative aspect of the SSEBop is that it uses predefined boundary conditions that are unique to each pixel for the "hot" and "cold" reference conditions. The SSEBop model was used for computing ET for 12 years (2000-2011) using the MODIS and Global Data Assimilation System (GDAS) data streams. SSEBop ET results compared reasonably well with monthly eddy covariance ET data explaining 64% of the observed variability across diverse ecosystems in the CONUS during 2005. Twelve annual ET anomalies (2000-2011) depicted the spatial extent and severity of the commonly known drought years in the CONUS. More research is required to improve the representation of the predefined boundary conditions in complex terrain at small spatial scales. SSEBop model was found to be a promising approach to conduct water use studies in the CONUS, with a similar opportunity in other parts of the world. The approach can also be applied with other thermal sensors such as Landsat.

Journal of the American Water Resources Associatio↗

USGS1975

Applications of remote sensing to structural interpretations in the southern Appalachians

Remote sensing is the technology of studying distant objects by measuring and recording energy from one or more segments of the electromagnetic spectrum. Imaging sensors which operate from medium- and high-altitude aircraft or from spacecraft can provide a synoptic view of large areas and of surface phenomena not evident in the field. Image-acquiring systems and instruments have been designed to partially automate data collection and to reduce the time devoted to analysis, information extraction, and detection of changes of surface phenomena. Among these phenomena are the surface distribution of heat, moisture, snow, water, vegetation, and cultural features. When coupled with ancillary data, including field surveys, sensor data provide useful information for the recognition and mapping of regional structure, jointing patterns, drainage patterns, fault and fracture traces, and rock types. The recognition of several major linear surface features, two of which proved to be traces of previously unrecognized faults (the Canebrake and the Coeburn faults) in the Appalachian Plateaus, demonstrates the pragmatic application of aircraft and spacecraft remote sensing to geological investigations in the Appalachians.

Virginia, West Virginia↗

USGS2022

Achieving sub-nanoTesla precision in multirotor UAV aeromagnetic surveys

An uncrewed aerial vehicle (UAV) multirotor aeromagnetic system using a 5-m sling load for a magnetic sensor system is described and characterized. Four magnetic surveys with identical flight lines were completed, at two nominal altitudes of 25 and 40 m. The surveys were used to assess the repeatability of data collected with the described UAV aeromagnetic system, and comparison with a ground survey was used to assess the precision. The 5-m sling is designed to reduce magnetic interference from the UAV. A magnetic compensation model was developed for this particular UAV aeromagnetic system. This custom compensation model reduces the noise in the collected data by a factor of five over the uncompensated data, and the 5-m sling further reduces the noise by an estimated factor of four over a similar system with a 3-m sling. The precision of the UAV aeromagnetic system was then estimated to be sub-nT, with 50% of the noise component <0.3 nT, and 90% <0.6 nT.

Journal of Applied Geophysics↗

USGS2018

Long-term soil-water tension measurements in semi-arid environments: A method for automated tensiometer refilling

Tensiometer-equipped data acquisition systems measure and record positive and negative soil-water pressures. These data contribute to studies in hillslope hydrology, including analyses of rainfall runoff, near-surface hydrologic response, and slope stability. However, the unique ability of a tensiometer to rapidly and accurately measure pre- and post-saturation subsurface pressures requires maintenance techniques that have precluded their application to unattended sensor networks in semiarid regions. Under suction, the de-aired water in the tensiometer is drawn from a porous cup. Under positive pressure, dissolved gases from pore water infiltrates the cup. Over time, both contribute to unreliable readings and/or poor signal response through cavitation. To address this problem, we used commercially available equipment to develop a simple system of solenoid valves and a water reservoir that enable automated in situ tensiometer refilling. We tested the system at two post-wildfire hydrologic monitoring sites in the Angeles National Forest, southern California. We present example results from 3 mo of monitoring and show how the tensiometers can be refilled by a remote trigger. By remotely refilling the tensiometer, we were able to continuously monitor quasi-saturated soil pore-water pressures without making repeated and costly maintenance visits.

Vadose Zone Journal↗

USGS2024

GNSS reflectometry from low-cost sensors for continuous in situ contemporaneous glacier mass balance and flux divergence

Recent advances in remote sensing have produced global glacier surface elevation change data. Parsing these elevation change signals into contributions from the climate (i.e. climatic mass balance) and glacier dynamics (i.e. flux divergence) is critical to enhance our process-based understanding of glacier change. In this study, we evaluate three approaches for direct, continuous measurements of the climatic mass balance, flux divergence, and elevation change at a site on Gulkana Glacier in Alaska using low-cost GNSS sensors, GNSS interferometric reflectometry (GNSS-IR), banded ablation stakes with time-lapse cameras, and combinations thereof. Cumulative climatic mass balance over the season was 4.85 m and the three approaches were within 0.08 m through early July before the snowpack melted, and within 0.28 m through mid-August. The flux divergence increased from 0.52 ± 0.03 cm d -1 before June 3 to roughly 0.73 cm d -1 after June 27. We demonstrate a single GNSS system fixed atop an ablation stake can measure contemporaneous climatic mass balance, flux divergence, and elevation change based on the antenna’s position and GNSS-IR techniques. The ability of these systems to measure glacier mass balance and flux divergence offers unique opportunities for year-round observations on mountain glaciers in the future.

Alaska↗