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9 recordsLinked to original sources
USGS2024

New diagnostic assessment of MCMC algorithm effectiveness, efficiency, reliability, and controllability

Markov Chain Monte Carlo (MCMC) is a robust statistical approach for estimating posterior distributions. However, the significant computational cost associated with MCMC presents a considerable challenge, complicating the selection of an appropriate algorithm tailored to the specific problem at hand. This study introduces a novel and comprehensive framework for evaluating the performance of MCMC algorithms, drawing inspiration from diagnostics used for multi-objective evolutionary algorithms. We employ visualizations to evaluate key algorithmic characteristics: Effectiveness (the ability to accurately find representative posterior modes, quantified by the Kullback-Leibler Divergence (KLD) andWasserstein Distance (WD)), Efficiency (the speed of posterior characterization), Reliability (consistency across different random seeds), and Controllability (insensitivity to hyperparameter variation). Evaluating three prominent MCMC algorithms—Metropolis-Hastings (MH), Adaptive Metropolis (AM), and Differential Evolution Adaptive Metropolis (DREAM)—on high-dimensional and bimodal test problems, our analysis uncovers several insights. First, across algorithms, the number of function evaluations most controls performance on the high-dimensional problem, while the number of chains most controls performance on the bimodal problem. While this suggests similar controllability across algorithms, differences emerge on the other algorithmic characteristics. For high numbers of functions evaluations, AM performs best on the high-dimensional problem, while for low (<5) and high (>15) chain counts, MH and AM perform best on the bimodal problem, as measured by KLD. However, outside these specific cases, DREAM consistently demonstrates superior efficiency and reliability, making it a robust choice for both high-dimensional and multimodal problems. These findings can inform MCMC algorithm selection for Bayesian inference applications, as well as hyperparameterization of the chosen algorithm...

IEEE Access↗
USGS2004

JuxtaView - A tool for interactive visualization of large imagery on scalable tiled displays

JuxtaView is a cluster-based application for viewing ultra-high-resolution images on scalable tiled displays. We present in JuxtaView, a new parallel computing and distributed memory approach for out-of-core montage visualization, using LambdaRAM, a software-based network-level cache system. The ultimate goal of JuxtaView is to enable a user to interactively roam through potentially terabytes of distributed, spatially referenced image data such as those from electron microscopes, satellites and aerial photographs. In working towards this goal, we describe our first prototype implemented over a local area network, where the image is distributed using LambdaRAM, on the memory of all nodes of a PC cluster driving a tiled display wall. Aggressive pre-fetching schemes employed by LambdaRAM help to reduce latency involved in remote memory access. We compare LambdaRAM with a more traditional memory-mapped file approach for out-of-core visualization. ?? 2004 IEEE.

Conference Paper↗
USGS2009

Atmospheric correction at AERONET locations: A new science and validation data set

This paper describes an Aerosol Robotic Network (AERONET)-based Surface Reflectance Validation Network (ASRVN) and its data set of spectral surface bidirectional reflectance and albedo based on Moderate Resolution Imaging Spectroradiometer (MODIS) TERRA and AQUA data. The ASRVN is an operational data collection and processing system. It receives 50 ?? 50 km 2 ; subsets of MODIS level 1B (L1B) data from MODIS adaptive processing system and AERONET aerosol and water-vapor information. Then, it performs an atmospheric correction (AC) for about 100 AERONET sites based on accurate radiative-transfer theory with complex quality control of the input data. The ASRVN processing software consists of an L1B data gridding algorithm, a new cloud-mask (CM) algorithm based on a time-series analysis, and an AC algorithm using ancillary AERONET aerosol and water-vapor data. The AC is achieved by fitting the MODIS top-of-atmosphere measurements, accumulated for a 16-day interval, with theoretical reflectance parameterized in terms of the coefficients of the Li SparseRoss Thick (LSRT) model of the bidirectional reflectance factor (BRF). The ASRVN takes several steps to ensure high quality of results: 1) the filtering of opaque clouds by a CM algorithm; 2) the development of an aerosol filter to filter residual semitransparent and subpixel clouds, as well as cases with high inhomogeneity of aerosols in the processing area; 3) imposing the requirement of the consistency of the new solution with previously retrieved BRF and albedo; 4) rapid adjustment of the 16-day retrieval to the surface changes using the last day of measurements; and 5) development of a seasonal backup spectral BRF database to increase data coverage. The ASRVN provides a gapless or near-gapless coverage for the processing area. The gaps, caused by clouds, are filled most naturally with the latest solution for a given pixel. The ASRVN products include three parameters of the LSRT model (kL, kG, and kV), surface albedo, normalized BRF (computed for a standard viewing geometry, VZA = 0, SZA = 45??), and instantaneous BRF (or one-angle BRF value derived from the last day of MODIS measurement for specific viewing geometry) for the MODIS 500-m bands 17. The results are produced daily at a resolution of 1 km in gridded format. We also provide a cloud mask, a quality flag, and a browse bitmap image. The ASRVN data set, including 6 years of MODIS TERRA and 1.5 years of MODIS AQUA data, is available now as a standard MODIS product (MODASRVN) which can be accessed through the Level 1 and Atmosphere Archive and Distribution System website ( http://ladsweb.nascom.nasa.gov/data/search.html). It can be used for a wide range of applications including validation analysis and science research. ?? 2006 IEEE.

IEEE Transactions on Geoscience and Remote Sensing↗
USGS2007

The science, technology and research network (STARNET) a searchable thematic compilation of web resources

International alliances in space efforts have resulted in a more rapid diffusion of space technology. This, in turn, increases pressure on organizations to push forward with technological developments and to take steps to maximize their inclusion into the research and development (R&D) process and the overall advancement and enhancement of space technology. To cope with this vast and rapidly growing amount of data and information that is vital to the success of the innovation, the Information Management Committee (IMC) of the Research Technology Agency (RTA) developed the science, technology and research network (STARNET). The purpose of this network is to facilitate access to worldwide information elements in terms of science, technology and overall research. It provides a virtual library with special emphasis on international security; a "one stop" information resource for policy makers, program managers, scientists, engineers, researchers and others. ?? 2007 IEEE.

Conference Paper↗
USGS1988

The Land Analysis System (LAS) for multispectral image processing

The Land Analysis System (LAS) is an interactive software system available in the public domain for the analysis, display, and management of multispectral and other digital image data. LAS provides over 240 applications functions and utilities, a flexible user interface, complete online and hard-copy documentation, extensive image-data file management, reformatting, conversion utilities, and high-level device independent access to image display hardware. The authors summarize the capabilities of the current release of LAS (version 4.0) and discuss plans for future development. Particular emphasis is given to the issue of system portability and the importance of removing and/or isolating hardware and software dependencies.

IEEE Transactions on Geoscience and Remote Sensing↗
USGS2012

Description of the U.S. Geological Survey Geo Data Portal data integration framework

The U.S. Geological Survey has developed an open-standard data integration framework for working efficiently and effectively with large collections of climate and other geoscience data. A web interface accesses catalog datasets to find data services. Data resources can then be rendered for mapping and dataset metadata are derived directly from these web services. Algorithm configuration and information needed to retrieve data for processing are passed to a server where all large-volume data access and manipulation takes place. The data integration strategy described here was implemented by leveraging existing free and open source software. Details of the software used are omitted; rather, emphasis is placed on how open-standard web services and data encodings can be used in an architecture that integrates common geographic and atmospheric data.

IEEE Journal of Selected Topics in Applied Earth O↗
USGS2015

Interactive access to LP DAAC satellite data archives through a combination of open-source and custom middleware web services

Current methods of searching for and retrieving data from satellite land remote sensing archives do not allow for interactive information extraction. Instead, Earth science data users are required to download files over low-bandwidth networks to local workstations and process data before science questions can be addressed. New methods of extracting information from data archives need to become more interactive to meet user demands for deriving increasingly complex information from rapidly expanding archives. Moving the tools required for processing data to computer systems of data providers, and away from systems of the data consumer, can improve turnaround times for data processing workflows. The implementation of middleware services was used to provide interactive access to archive data. The goal of this middleware services development is to enable Earth science data users to access remote sensing archives for immediate answers to science questions instead of links to large volumes of data to download and process. Exposing data and metadata to web-based services enables machine-driven queries and data interaction. Also, product quality information can be integrated to enable additional filtering and sub-setting. Only the reduced content required to complete an analysis is then transferred to the user.

IEEE Geoscience and Remote Sensing Letters↗
USGS2022

Constructing a large-scale landslide database across heterogeneous environments using task-specific model updates

Preparation and mitigation efforts for widespread landslide hazards can be aided by a large-scale, well-labeled landslide inventory with high location accuracy. Recent smallscale studies for pixel-wise labeling of potential landslide areas in remotely-sensed images using deep learning (DL) showed potential but were based on data from very small, homogeneous regions with unproven model transferability. In this paper we consider a more realistic and practical setting for large-scale heterogeneous landslide data collection and DL-based labeling. In this setting, remotely sensed images are collected sequentially in temporal batches, where each batch focuses on images from a particular ecoregion, but different batches can focus on different ecoregions with distinct landscape characteristics. For such a scenario, we study the following questions: (1) How well do DL models trained in homogeneous regions perform when they are transferred to different ecoregions, (2) Does increasing the spatial coverage in the data improve model performance in a given ecoregion (even when the extra data do not come from the ecoregion), and (3) Can a landslide pixel labeling model be incrementally updated with new data, but without access to the old data and without losing performance on the old data (so that researchers can share models obtained from proprietary datasets)' We address these questions by extending the Learning without Forgetting framework, which is used for incremental training of image classification models, to the setting of incremental training of semantic segmentation models (e.g., identifying all landslide pixels in an image). We call the resulting extension Task-Specific Model Updates (TSMU). TSMU semantic segmentation framework consists of an encoder shared by all ecoregions to capture the similarities between them, and ecoregion-specific decoders to capture the nuances of each ecoregion. This framework is continually updated using a threestage training procedure for each new addition of an ecoregion without having to revisit data from old ecoregions and without losing performance on them.

IEEE Journal of Selected Topics in Applied Earth O↗
USGS2010

The CEOS-Land Surface Imaging Constellation Portal for GEOSS: A resource for land surface imaging system information and data access

The Committee on Earth Observation Satellites is an international group that coordinates civil space-borne observations of the Earth, and provides the space component of the Global Earth Observing System of Systems (GEOSS). The CEOS Virtual Constellations concept was implemented in an effort to engage and coordinate disparate Earth observing programs of CEOS member agencies and ultimately facilitate their contribution in supplying the space-based observations required to satisfy the requirements of the GEOSS. The CEOS initially established Study Teams for four prototype constellations that included precipitation, land surface imaging, ocean surface topography, and atmospheric composition. The basic mission of the Land Surface Imaging (LSI) Constellation [1] is to promote the efficient, effective, and comprehensive collection, distribution, and application of space-acquired image data of the global land surface, especially to meet societal needs of the global population, such as those addressed by the nine Group on Earth Observations (GEO) Societal Benefit Areas (SBAs) of agriculture, biodiversity, climate, disasters, ecosystems, energy, health, water, and weather. The LSI Constellation Portal is the result of an effort to address important goals within the LSI Constellation mission and provide resources to assist in planning for future space missions that might further contribute to meeting those goals.

earthzine, an IEEE online publication↗