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At least 19 recordsLinked to original sources
USGS2018

Reproductive output and clutch phenology of female Agassiz's desert tortoises (Gopherus agassizii) in the Sonoran Desert region of Joshua Tree National Park

Agassiz's desert tortoise ( Gopherus agassizii ) reaches the southern edge of its range in the Sonoran Desert of California. The reproductive ecology of this wideranging species is understudied here compared to populations in the adjacent Mojave Desert. Understanding potential geographic variation in reproductive ecology is important for effective management of conservation-reliant species like G. agassizii . We studied the fecundity and clutch phenology of female G. agassizii at two study sites in the Sonoran Desert region of Joshua Tree National Park over five years (1997–1999, 2015–2016) spanning two of the strongest El Niño events on record and an epic drought. Across all years, mean clutch size was 4.3±1.5 eggs, mean clutch frequency was 1.78 clutches/female/year, and mean X-ray egg width was 36.51±1.56 mm, all of which are comparable to other published studies both in the Sonoran and Mojave deserts of California. Our results generally support earlier published findings that G. agassizii utilize a bet-hedging strategy of consistently producing small clutches almost every year, even during times of low annual primary productivity. A regionally warmer climate in the Sonoran Desert of California appears to have an effect on the timing of egg production, as the earliest dates of egg visibility in our study (April 6) were approximately two weeks earlier than the earliest dates reported for G. agassizii in the Mojave Desert. Shelled eggs were no longer visible in tortoises after mid-June in all years but the El Niño year 1998, when eggs were visible until mid-July.

California↗
USGS2019

An introduced breeding population of Chrysemys picta marginata in the Kaibab National Forest, northern Arizona

The painted turtle ( Chrysemys picta ) is widely distributed from coast to coast in North America with each of four subspecies generally occupying different regions. In the southwestern USA and northern Mexico, where C. p. bellii is the expected native race, populations are small and widelyscattered. Introduced populations of other painted turtle subspecies are reported from various locations in the USA. We discovered a small but dense introduced population of C. p. marginata on the Colorado Plateau in northern Arizona, a region with few, if any, turtles due to aridity and an elevated topography with little surface water. The turtles were in a remote pond constructed to provide cattle with water. Chrysemys p. marginata occur naturally east of the Mississippi River, over 2,000 km away. The nearest native population of C. p. bellii in Arizona is over 160 km away. We observed nesting females, juveniles, and the presence of shelled eggs in females via Xradiography confirming a self-sustaining population. The body sizes and nesting season we observed were consistent with data for those variables from native populations of the taxon. It is unknown exactly how the turtles came to be established in such a remote location, but it is unlikely that they will spread due to the scarcity of perennial water sources in the semi-arid region. Due to increasing drought frequency and duration in the region, small populations like this one, introduced into a novel environment, may be bellwethers for monitoring the effects of climate change.

Arizona↗
USGS2014

Traditional cultural use as a tool for inferring biogeography and provenance: a case study involving painted turtles ( Chrysemys picta ) and Hopi Native American culture in Arizona, USA

Inferring the natural distribution and native status of organisms is complicated by the role of ancient and modern humans in utilization and translocation. Archaeological data and traditional cultural use provide tools for resolving these issues. Although the painted turtle (Chrysemys picta) has a transcontinental range in the United States, populations in the Desert Southwest are scattered and isolated. This pattern may be related to the fragmentation of a more continuous distribution as a result of climate change after the Pleistocene, or translocation by Native Americans who used turtles for food and ceremonial purposes. Because of these conflicting or potentially confounded possibilities, the distribution and status of C. picta as a native species in the state of Arizona has been questioned in the herpetological literature. We present evidence of a population that once occurred in the vicinity of Winslow, Arizona, far from current remnant populations on the upper Little Colorado River. Members of the Native American Hopi tribe are known to have hunted turtles for ceremonial purposes in this area as far back as AD 1290 and possibly earlier. Remains of C. picta are known from several pueblos in the vicinity including Homol'ovi, Awatovi, and Walpi. Given the great age of records for C. picta in Arizona and the concordance of its fragmented and isolated distribution with other reptiles in the region, we conclude that painted turtles are part of the native fauna of Arizona.

Arizona;Utah↗
USGS2015

Crocodylus acutus (American Crocodile). Long distance juvenile movement

Crocodylus acutus (American Crocodile) is the most widely distributed New World crocodilian species with its range extending from Peru in the south to the southern tip of peninsular Florida in the north. Crocodylus acutus occupies primarily coastal brackish water habitat, however it also occurs in freshwater to hypersaline habitats (Thorbjarnarson 2010. In Crocodiles. Status Survey and Conservation Action Plan. [Third Edition], American Crocodile Crocodylus acutus, pp. 46–53 S.C. Manolis and C. Stevenson. Crocodile Specialist Group, Darwin). There is limited literature on long distance movements of juvenile crocodilians worldwide and no literature on juvenile crocodiles in Florida. However, adult C. acutus in Florida have been documented to make seasonal movements of 5–15 km from preferred foraging habitat to nesting beaches (Mazzotti 1983. The Ecology of Crocodylus acutus in Florida. PhD Dissertation. The Pennsylvania State University, University Park, Pennsylvania. 161pp), and one adult was documented making a 35 km trip from her nest site to preferred foraging habitat (Cherkiss et. al. 2006. Herpetol. Rev. 38:72–73). Rodda (1984. Herpetologica 40:444–451) reported on juvenile C. acutus movement in Gatun Lake, Panama, and found that juveniles stayed within 1 km of their nest site for the first month. Movements of juvenile Crocodylus porosus (Saltwater Crocodile) in a river system in Northern Australia showed a maximum movement of 38.9 km from a known nest site, with the majority of the crocodiles staying within 15.6 km downstream to 6.8 km upstream (Webb and Messel 1978. Aust. Wildlife Res. 5:263–283). Juvenile movement of Crocodylus niloticus (Nile Crocodile) in Lake Ngezi, Zimbabwe showed crocodiles restricted their movements from 1.0 km up to 4.5 km through the wet and dry seasons (Hutton 1989. Am. Zool. 29:1033–1049). Long distance movements of alligators were recorded for sizes ranging from 28 cm to 361 cm in a coastal refuge in Louisiana, where the distance traveled ranged from 0.3 km to 90.2 km. The data showed that the smaller alligators moved greater distance than larger ones (Lance et al. 2011. Southeast Nat. 10:389–398). An ongoing 30 year mark and recapture study for Crocodylus acutus in Florida allowed us to look at long distance movement (>30 km) of juveniles (30km). Initial and most recent captures as a juvenile were used to analyze distances moved (Fig. 1). These distances were measured linearly between capture locations. Maximum linear distances of 76.3 km and 69.6 km were recorded for animals 4838 and 6662. All crocodiles moved from nesting habitat through potentially optimal nursery habitat prior to reaching their recapture locations. These juvenile long distance movements could be due to larger crocodiles facilitating their dispersal from the nest location (Lance et al. 2011. op. cit.). These data (Table 1.) support that there is exchange of individuals among the nesting colonies and our ongoing efforts to monitor this threatened species allow us to make observations of how juvenile crocodiles are moving throughout the landscape in an ecosystem currently undergoing restoration.

Herpetological Review↗
USGS1983

Distribution and ecology of marine turtles in waters off the southeastern United States

Aerial surveys of marine waters up to 222 km from shore in the Gulf of Mexico and nearby Atlantic Ocean suggest that marine turtles are largely distributed in waters less than 100 m in depth. The loggerhead turtle (Caretta caretta) was observed nearly 50 times as often in waters off eastern and western Florida as in the western Gulf of Mexico. Loggerheads were present year round but the frequency of sightings in the winter months was lower than at other seasons. Green turtles (Chelonia rnydas) were infrequently observed but were most conspicuous in waters off eastern Florida. Kemp's ridleys (Lepidochelys kempi) were most frequently sighted off southwestern Florida and rarely observed in the western Gulf of Mexico. Leatherback turtles (Dermochelys coriacea) were more conspicuous on the continental shelf than in adjacent deeper waters. A concentration of leatherback and loggerhead turtles occurred west of the Gulf Stream Current in August 1980, near Brevard County, Florida.

Journal of Herpetology↗
USGS2004

Phylogenetic relationships of the endangered Shenandoah salamander (Plethodon shenandoah) and other salamanders of the Plethodon cinereus group (Caudata: Plethodontidae)

The Shenandoah salamander ( Plethodon shenandoah ), known from isolated talus slopes on three of the highest mountains in Shenandoah National Park, is listed as state-endangered in Virginia and federally endangered under the U.S. Endangered Species Act. A 1999 paper by G. R. Thurow described P. shenandoah -like salamanders from three localities further south in the Blue Ridge Physiographic Province, which, if confirmed, would represent a range extension for P. shenandoah of approximately 90 km from its nearest known locality. Samples collected from two of these three localities were included in a molecular phylogenetic study of the known populations of P. shenandoah , and all other recognized species in the Plethodon cinereus group, using a 792 bp region of the mitochondrial cytochrome-b gene. Phylogenetic estimates were based on Bayesian, maximum likelihood, and maximum parsimony methods and topologies examined for placement of the new P. shenandoah -like samples relative to all others. All topologies recovered all haplotypes of the P. shenandoah -like animals nested within P. cinereus , and a statistical comparison of the best likelihood tree topology with one with an enforced (Thurow + Shenandoah P. shenandoah ) clade revealed that the unconstrained tree had a significantly lower -In L score (P < 0.05, using the Shimodaira-Hasegawa test) than the constraint tree. This result and other anecdotal information give us no solid reason to consider the Thurow report valid. The current recovery program for P. shenandoah should remain focused on populations in Shenandoah National Park.

Virginia↗
USGS1991

Ecology of the island night lizard, Xantusia riversiana, on Santa Barbara Island, California

We studied the population biology and ecology of the island night lizard (Xantusia riversiana) on Santa Barbara Island, California from 1981-1988. We trapped all the major habitats on the island, using pitfall traps and Sherman small mammal traps. In addition to permanently marking individuals by toe-clipping, we used specialized marking techniques on some individuals (fluorescent powder and radioactive tags) to study home range, movement and activity patterns. Island night lizards are exclusively diurnal and exceedingly secretive. Though generally cryptic in coloration, their dorsal coloration is highly variable. They occur most commonly in habitats providing dense vegetative cover (thickets of boxthorn and prickly pear) and in certain types of rock habitat. Night lizards are sedentary and have very small home ranges (x̄=17.2m 2 ). They are slow-growing with some individuals living to at least 12 years old. The most common injuries (tail and scale injuries) apparently result from intraspecific fighting. A wide variety of terrestrial spiders and insects make up the majority of their diet, but they also feed on an unusually large amount of plant material for a small lizard. Because of their diverse diet, low metabolic rate and small, overlapping home ranges, they reach greater densities (>3200 lizards/ha in boxthorn) than previously reported for any other ground-dwelling lizard. Favorable habitat has been reduced because of past farming and grazing, but, given their wide distribution on the island, exceptionally high densities and current protection within a National Park, X. riversiana on Santa Barbara Island are not threatened with extinction, as was previously thought.

Herpetological Monographs↗
USGS2021

Abundance of Gulf Coast Waterdogs (Necturus beyeri) along Bayou Lacombe, Saint Tammany Parish, Louisiana

Few ecological studies have been conducted on Gulf Coast Waterdogs (Necturus beyeri), and published studies have focused on relatively small stream sections of 125 m to 1.75 km. In 2015, we sampled 25 sites along a 13.4-km stretch of Bayou Lacombe (Saint Tammany Parish, Louisiana, USA) to better understand factors that may influence the distribution of Gulf Coast Waterdogs within streams. We checked 250 unbaited traps once per week for 3 weeks, capturing 170 Gulf Coast Waterdogs at 18 of 25 sites. We used hierarchical models of abundance to estimate abundance at each site, as a function of site covariates including pH, turbidity, and distance from headwaters. The abundance of Gulf Coast Waterdogs within Bayou Lacombe was highest toward the center of the sampled stream segment, but we found no evidence that pH or turbidity affected abundance within our study area. Site-level abundance estimates of Gulf Coast Waterdogs ranged from 0 to 82, and we estimated there were 767 (95% Bayesian credible interval [CRI]: 266–983) Gulf Coast Waterdogs summed across all 25 sampling sites. We derived an estimate of 6,321 (95% CRI: 2,139–15,922) Gulf Coast Waterdogs for the entire 13.4-km stream section, which includes our 25 sites and the adjoining stream reaches between sites. Our results suggest that Gulf Coast Waterdogs may be uncommon or absent in the headwaters, possibly because of shallow water and swift currents with limited preferred habitats. Gulf Coast Waterdogs favor the middle stream reaches with adequate depth and abundant preferred microhabitats.

Louisiana↗
USGS2021

Reptile and amphibian diversity and abundance in an urban landscape: Impacts of fragmentation and the conservation value of small patches

Urbanization is a major contributor to habitat loss and fragmentation and is considered a global threat to biodiversity. We studied reptile and amphibian species diversity and abundance in a highly fragmented landscape adjacent to the second largest metropolitan area in the United States. Habitat patches in our study area were made up of remnant native vegetation surrounded by roads, housing, and other urban development. Species richness and diversity were positively associated with patch size, but patch age was not significantly associated with community characteristics. Four relatively common species were not detected in the small patches, indicating the possibility they had been extirpated by the time monitoring began, and six rarer species were not detected or detected only once in these patches. Although the patch size effect on species diversity was strong, we found that several of the small habitat patches had similar diversity to large patches, indicating potential value of these small habitat patches in protecting species as “microreserves.” In addition, one lizard species was found to be significantly more abundant in the smaller patches. To determine if abundance changed over time, we compared capture rates for four common lizards at the same sites ten years later. For three of the four species, abundance decreased over that period, specifically in the small patches. Although our long-term monitoring has confirmed that the full suite of herpetofauna is currently preserved in the study area overall, declines even in the common species over time hint at the potential severity of the threat of urbanization to rare species.

California↗
USGS2022

Range-wide population projections for Northern Red-Bellied Cooters (Pseudemys rubriventris)

Northern Red-Bellied Cooters ( Pseudemys rubriventris ) have a disjunct distribution with a relictual population in southeastern Massachusetts and a larger range across the mid-Atlantic United States. The relictual population is currently listed with protections under the U.S. Endangered Species Act but the status of the population in the remainder of the species' range has not been assessed, and there is concern that it may be at risk of extinction without protection. The U.S. Fish and Wildlife Service requires scientific information of the species' status to inform conservation decisions. There is little empirical information available from P. rubriventris populations and, furthermore, the majority of what exists comes from the disjunct northern subpopulation. To fill data gaps in the species' life history and reduce geographic bias, we supplement available data from P. rubriventris with demographic rate estimates from other Pseudemys species to parameterize an age-structured population projection model. Our estimate of mean population growth rate was 0.987 (0.92–1.04), indicating that P. rubriventris populations may be in decline. However, there was considerable uncertainty in our results, with 35% of projections resulting in stable or increasing populations. Additional uncertainty about parameter values, geographic variation, and current threats limit the assessment. We discuss the merits and limitations of our population projection modeling (PPM) approach where other analytical methods are precluded by lack of available data.

Maryland, Massachusetts, New Jersey, North Carolin↗
USGS2011

Habitat use and movement of the endangered Arroyo Toad ( Anaxyrus californicus ) in coastal southern California

Information on the habitat use and movement patterns of Arroyo Toads ( Anaxyrus californicus ) is limited. The temporal and spatial characteristics of terrestrial habitat use, especially as it relates to upland use in coastal areas of the species' range, are poorly understood. We present analyses of radiotelemetry data from 40 individual adult toads tracked at a single site in coastal southern California from March through November of 2004. We quantify adult Arroyo Toad habitat use and movements and interpret results in the context of their life history. We show concentrated activity by both male and female toads along stream terraces during and after breeding, and, although our fall sample size is low, the continued presence of adult toads in the floodplain through the late fall. Adult toads used open sandy flats with sparse vegetation. Home-range size and movement frequency varied as a function of body mass. Observed spatial patterns of movement and habitat use both during and outside of the breeding period as well as available climatological data suggest that overwintering of toads in floodplain habitats of near-coastal areas of southern California may be more common than previously considered. If adult toads are not migrating out of the floodplain at the close of the breeding season but instead overwinter on stream terraces in near-coastal areas, then current management practices that assume toad absence from floodplain habitats may be leaving adult toads over-wintering on stream terraces vulnerable to human disturbance during a time of year when Arroyo Toad mortality is potentially highest.

California↗
USGS2023

Disinfection protocols for herpetofaunal pathogens

The spread of disease-causing pathogens is a major threat to amphibians and reptiles worldwide (Converse and Greene 2005; Picco et al. 2007; Picco and Collins 2008; St-Amour et al. 2008; O’Hanlon et al. 2018; Scheele et al. 2019). The World Organisation for Animal Health’s global list of notifiable animal diseases includes herpetofaunal diseases caused by infection with Ranavirus spp. (RV) and two chytrid fungi, Batrachochytrium dendrobatidis (Bd) and B. salamandrivorans (Bsal; WOAH 2023). Scientists began testing the efficacy of disinfection protocols even before human-assisted transmission of these pathogens was documented (Johnson et al. 2003; Johnson and Speare 2003; Brem et al. 2007; Bryan et al. 2009), and now guidance exists to determine the appropriate biosecurity measures as personal gear moves between habitats, construction equipment moves between project areas, and investigators handle multiple animals within a population (Phillot et al. 2010; Gray et al. 2017, 2018; Julian et al. 2020; Olson et al. 2021). People who are engaged in educational, recreational, commercial, or professional activities in wetlands and aquatic habitats play an important role in helping prevent the spread of pathogens and should know how and when to employ appropriate disinfecting procedures. In particular, working groups and regional chapters of Partners in Amphibian and Reptile Conservation (PARC) have developed a variety of educational materials on biosecurity and disinfection for a wide audience (e.g., PARC 2023). Herein, we provide the instructions for the disinfection of field equipment that were recently revised by the Emerging Disease Working Group of Northeast PARC (NEPARC 2022). The impetus for revision was to inform field personnel of the use of a stronger bleach concentration (ca. 10× stronger) that is needed for effectiveness against Bsal (Van Rooij et al. 2017). This is important for regions where Bsal is currently known to occur (e.g., central Europe) as well as regions where it is presumed absent but could arrive at any time (e.g., North America)

Herpetological Review↗
USGS2015

An assessment of the impact of the pet trade on five CITES-Appendix II case studies - Boa constrictor imperator

Boa constrictor is a wide ranging snake species that is common in the pet trade and is currently listed in CITES Appendix II. Hog Island boas, or Cayos Cochinos boas, are a dwarf, insular race of Boa constrictor imperator endemic to the Cayos Cochinos Archipelago, Honduras. Cayos Cochinos boas are prized in the international pet trade for their light pink dorsal coloration, as well as for being much smaller and more docile than mainland boas (Porras, 1999; Russo, 2007). The boa population in the Cayos Cochinos was heavily exploited for the pet trade from 1979 to 1993, and researchers reported finding no boas on the islands during a five day herpetological survey trip in the early 1990s (Wilson and CruzDiaz, 1993), leading to the speculation that the population had been extirpated (e.g., Russo, 2007). The Cayos Cochinos Archipelago Natural Marine Monument has been managed by the Honduran Coral Reef Foundation since 1994 and prohibits removal of boas from the area. Poaching for the pet trade continues today, although at a lower level. Due to the endemic nature of this island morph of B. c. imperator it is imperative that we understand the dynamics of the populations and the ongoing threats that could negatively impact their long-term survival.

Cayos Cochinos Archipelago (Hog Islands), Islas de↗
USGS1992

Assessing effects of pesticides on amphibians and reptiles: status and needs

Growing concern about the decline of certain amphibian populations and for conservation of amphibians and reptiles has led to renewed awareness of problems from pesticides. Testing amphibians and reptiles as a requirement for chemical registration has been proposed but is difficult because of the phylogenetic diversity of these groups. Information from the literature and research may determine whether amphibians and reptiles are adequately protected by current tests for mammals, birds, and fish. Existing information indicates that amphibians are unpredictably more resistant to certain cholinesterase inhibitors, and more sensitive to two chemicals used in fishery applications than could have been predicted. A single study on one species of lizard suggests that reptiles may be close in sensitivity to mammals and birds. Research on effects of pesticides on amphibians and reptiles should compare responses to currently tested groups and should seek to delineate those taxa and chemicals for which cross-group prediction is not possible. New tests for amphibians and reptiles should rely to the greatest extent possible on existing data bases, and should be designed for maximum economy and minimum harm to test animals. A strategy for developing the needed information is proposed. Good field testing and surveillance of chemicals in use may compensate for failures of predictive evaluations and may ultimately lead to improved tests.

Herpetological Journal↗
USGS2017

Climate-mediated competition in a high-elevation salamander community

The distribution of the federally endangered Shenandoah Salamander ( Plethodon shenandoah ) is presumed to be limited by competition with the Red-backed Salamander ( Plethodon cinereus ). In particular, the current distribution of P. shenandoah is understood to be restricted to warmer and drier habitats because of interspecific interactions. These habitats may be particularly sensitive to climate change, though the influence of competition may also be affected by temperature and relative humidity. We investigated the response of P. shenandoah to competition with P. cinereus under four climate scenarios in 3-dimensional mesocosms. The results suggest that, although climate change may alleviate competitive pressure from P. cinereus , warmer temperatures may also significantly influence the persistence of the species across its known range.

Journal of Herpetology↗
USGS2021

Phenotypic variation in Brook Trout Salvelinus fontinalis (Mitchill) at broad spatial scales makes morphology an insufficient basis for taxonomic reclassification of the species

It was recently proposed that there are three new species of Salvelinus with microendemic distributions in the Great Smoky Mountains National Park, Tennessee, USA. The three species of Salvelinus were hypothesized to be distinct from their congener Brook Trout S. fontinalis based on three meristic traits—pored lateral-line scales, vertebral counts, and number of basihyal teeth. After analyses that included specimens sampled from a larger portion of the geographic range of S. fontinalis , we conclude that the three populations of Salvelinus recently described as new species are not morphometrically distinct from Brook Trout and consider all three to be synonyms of S. fontinalis . Moreover, the low number of specimens originally examined conflates morphological differences among populations with sexual dimorphism and/or phenotypic plasticity, both of which are documented extensively in Brook Trout but were not controlled for in the species descriptions. While there is currently insufficient phenotypic or genotypic evidence to support the hypothesis of three new species that are distinct from S. fontinalis , we acknowledge the need to understand the unique selection pressures that shape evolutionary trajectories in small, isolated populations of Brook Trout and to conserve evolutionarily significant sources of genotypic and phenotypic diversity. To that end, we provide comments on research opportunities to support Brook Trout conservation, including the importance of collaborative, range-wide phylogenetic studies to identify the most appropriate scales of management efforts.

New York, Tennessee↗
USGS2009

Efficacy of automatic vocalization recognition software for anuran monitoring

Surveys of vocalizations are a widely used method for monitoring anurans, but it can be difficult to coordinate standardized data collection across a large geographic area. Digital automated recording systems (ARS) offer a low-cost method for obtaining samples of anuran vocalizations, but the number of recordings can easily overwhelm human listeners. We tested Song Scope, an automatic vocalization recognition software program for personal computers to determine if this type of machine learning approach is currently a viable solution for anuran monitoring. For three species, Song Scope scanned more than 200 h of recordings in 3-20 h at the settings we chose. The software misidentified true calls (false positive) at rates of 2.7%-15.8% per species and failed to detect calls (false negative) in 45%-51% of recordings. There exists a tradeoff between false positive and false negative errors, which can be adjusted by setting the minimum criteria for the recognition software. Users of this approach should carefully consider their reasons for monitoring and how they intend to use the data before creating a large monitoring network.

Louisiana↗