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A finite element model for tides and currents with field applications

A finite element model, based upon the shallow water equations, is used to calculate tidal amplitudes and currents for two field-scale test problems. Because tides are characterized by line spectra, the governing equations are subjected to harmonic decomposition. Thus the solution variables are the real and imaginary parts of the amplitude of sea level and velocity rather than a time series of these variables. The time series is recovered through synthesis. This scheme, coupled with a modified form of the governing equations, leads to high computational efficiency and freedom from excessive numerical noise. Two test-cases are presented. The first is a solution for eleven tidal constituents in the English Channel and southern North Sea, and three constituents are discussed. The second is an analysis of the frequency response and tidal harmonics for south San Francisco Bay.

Communications in Applied Numerical Methods↗

Assessing and implementing the concept of Blue Economy in Laurentian Great Lakes fisheries: Lessons from coupled human and natural systems

Inland fisheries often receive little to no attention in global discussions about sustainable development. The consequences of overlooking inland fisheries in sustainability dialogues are increasingly problematic as fisheries stressors (e.g., overharvest, species invasion, climate change, habitat modification) intensify. Elevating the global profile of inland fisheries requires an approach for quantifying and clearly conveying the ecological, economic, and societal values of these systems. One such approach involves the Blue Economy, a multifaceted concept initially used to describe the intersection of marine conservation and sustainable use of marine resources for economic growth. Although conceptually powerful, the Blue Economy has rarely been applied to inland waters and fisheries. To address this knowledge gap, we conceptualized Laurentian Great Lakes fisheries from a Blue Economy perspective. In particular, we evaluated the utility of the coupled human and natural systems (CHANS) framework for characterizing the ecological, economic, and societal values of Laurentian Great Lakes fisheries and associated contributions to the Blue Economy (e.g., human livelihoods, food security, recreation, conservation, economic prosperity). There are numerous opportunities to leverage CHANS methods (e.g., metacoupling, telecoupling) and associated mathematical models to advance fisheries science, inform fisheries management, and ultimately move toward a Blue Economy in the Laurentian Great Lakes. To that end, we demonstrated applications of CHANS methods, discussed strategies for communicating with stakeholders, and provided insights for navigating challenges to developing a Blue Economy in the Laurentian Great Lakes—a model that could be used in the African Great Lakes and other large ecosystems in the world.

Laurentian Great Lakes↗

Bovine tuberculosis management in northwest Minnesota and implications of the Risk Information Seeking and Processing (RISP) model for wildlife disease management

Bovine tuberculosis (bTB) is an infectious, zoonotic disease caused by Mycobacterium bovis that can spread between domestic and wild animals, as well as to humans. The disease is characterized by the progressive development of lesions that compromise the victim's lungs and lymph system. The disease was first identified in northwest Minnesota in both cattle and white-tailed deer ( Odocoileus virginianus ) in 2005. Due to its risks to human and animal health, bTB has numerous implications related to population management, policy outcomes, stakeholder relations, and economic impacts. When dealing with complicated risks, like bTB, individuals often seek out and process information as a method to learn about, and cope, with the risk. We developed a questionnaire that adapted components of the Risk Information Seeking and Processing (RISP) model and surveyed northwest Minnesota deer hunters. Our objectives were to better understand how stakeholders perceive and act on information regarding disease management in wildlife and to understand the utility of the RISP model for such management contexts. We drew a random proportional sample of licensed deer hunters ( n = 2100) from the area affected by bTB and conducted a multi-contact mail survey. We found that 43% of the variability in the information-seeking behaviors of respondents was explained by demographics, hunting importance, personal risk perceptions, attitudes, and subjective norms. However, these results are largely attributable to the factors in the RISP model encompassed by components of the Theory of Planned Behavior (i.e., attitudes, subjective norms, perceived behavioral control, and behavioral intentions). This information can help managers contextualize individuals' perceived risks to better frame communication efforts to address stakeholder concerns and develop best practices for disease communication. While the state of Minnesota is currently considered free of bTB, future outbreaks remain possible in Minnesota and elsewhere. Understanding the key factors in the processes through which deer hunters seek out information pertaining to the disease can help managers collect the data necessary to aid decisions about desired future management outcomes. In addition, testing RISP model performance in applied research improves its future use across a broad spectrum of topics throughout veterinary disease management.

Minnesota↗

The North American Bird Banding Program: Into the 21st century

The authors examined the legal, scientific, and philosophical underpinnings of the North American Bird Banding Program [BBP], with emphasis on the U.S. Bird Banding Laboratory [BBL], but also considering the Canadian Bird Banding Office [BBO]. In this report, we review the value of banding data, enumerate and expand on tile principles under which any modern BBP should operate, and from them derive our recommendations. These are cast into a Mission Statement, a Role and Function Statement, and a series of specific recommendations addressing five areas: (1) permitting procedures and practices; (2) operational issues; (3) data management; (4) BBL organization and staffing; and (5) implementation. Our major tenets and recommendations are as follows: banding provides valuable data for numerous scientific, management, and educational purposes, and its benefits far outweigh necessary biological and fiscal costs, especially those incurred by the BBL and BBO; because of the value of banding data for management of avian resources, including both game and nongame birds, government support of the program is fully justified and appropriate; all banding data, if collected to appropriate standards, are potentially valuable; there are many ways to increase the value of banding data such as by endorsing, promoting, and applying competence and/or training standards for permit issuance; promoting bander participation in well-designed projects; and by encouraging the use of banding data for meta-analytical approaches; the BBL should apply, promote, and encourage such standards, participation, and approaches; the BBP should be driven by the needs of users, including scientists and managers; all exchange of data and most communication between banders and the BBL should become electronic in the near future; the computer system at the BBL should be modernized to one designed for a true client-server relationship and storage of data in on-line relational databases; the BBL should continue to maintain high quality control and editing standards and should strive to bring all data in the database up to current standards; however, the BBL should transfer a major portion of the responsibility for editing banding data to the bander by providing software that will permit the bander to edit his/her own data electronically before submission to the BBL; the BBL should build the capacity to store additional data tied to original band records able to be pre-edited and submitted electronically, such as recapture data, appropriate data from auxiliary marking (e.g. resightings of color-marked birds), and other data that gain value when pooled from many banders (e.g., measurements); however, the BBL should only accept such data if they are collected using standardized methods and as part of an established program designed to utilize such data; now is the time to consider options for implementing a Western Hemisphere banding program, with leadership from the BBL; the Patuxent Electronic Data Processing Section should become part of the BBL; additional scientific and technical staff must be added to the BBL; an Implementation Team should be formed to expedite our recommendations, following timetables outlined in this document.

Journal of Field Ornithology↗

Response of Global Navigation Satellite System receivers to known shaking between 0.2 and 20 Hertz

Over the past decade, several technological advances have allowed Global Navigation Satellite Systems (GNSS) receivers to have the capability to record displacements at high frequencies, with sampling rates approaching 100 samples per second (sps). In addition, communication and computer hardware and software have allowed various institutions, including the U.S. Geological Survey (USGS), to retrieve, process, and display position changes recorded by a network of GNSS sites with small, less than 1-s delays between the time that the GNSS receiver records signals from a constellation of satellites and the time that the position is estimated (a method known as “real-time”). These improvements in hardware and software have allowed the USGS to process GNSS (or a subset of the GNSS, the Global Positioning System, GPS) data in real-time at 1 sps with the goal of determining displacements from earthquakes and volcanoes in real-time. However, the current set of GNSS equipment can record at rates of 100 sps, which allows the possibility of using this equipment to record earthquake displacements over the full range of frequencies that typically are recorded by acceleration and velocity transducers. The advantage of using GNSS to record earthquakes is that the displacement, rather than acceleration or velocity, is recorded, and for large earthquakes, the GNSS sensor stays on scale and will not distort the observations due to clipping of the signal at its highest amplitude. The direct observation of displacement is advantageous in estimating the size and spatial extent of the earthquake rupture. Otherwise, when using velocity or acceleration sensors, the displacements are determined by numerical integration of the observations, which can introduce significant uncertainty in the estimated displacements. However, GNSS technology can, at best, resolve displacements of a few millimeters, and for most earthquakes, their displacements are less than 1 mm. Consequently, to be useful, GNSS data are only relevant for the large earthquakes with magnitudes (M) exceeding M5.5 at best. With the capability to record GNSS data at high-rate, at sampling rates typical for seismological applications, experiments are needed to quantify the response of GNSS to shaking from earthquakes. There have been a few studies that examine the response of GNSS to strong shaking. One of the first was Elosegui and others (2006), where they simulated surface waves from a distant earthquake and mechanically applied the shaking to a GPS antenna. They processed the 1 sps observations and compared the estimated displacements with the simulated displacements. They determined that the GPS could accurately track the simulated surface wave whose primary frequency spans from 0.01 to 0.1 Hertz (Hz), which spanned the frequency band of the simulation. To test GNSS equipment due to shaking from a large earthquake in the near-field, Wang and others (2012) used a mechanical simulator or shake table with 6 degrees of freedom and studied two different inputs to the simulator—(1) the accelerometer record from one station that was located near the 2010 M8.8 Maule, Chile earthquake, and (2) a 2-Hz sinusoid. Wang and others (2012) analyzed the 2-Hz data with spectral analysis and determined that the displacements observed by the GPS included higher harmonics along with the 2-Hz signal. In addition, the background spectral amplitude was greater during periods of 2-Hz shaking than when at rest. With the simulated M 8.8 earthquake, Wang and others (2012) observed decreased signal to noise for L1 and L2 carrier frequencies of the GPS signal, at times corresponding to high acceleration and jerk (first derivative of acceleration). One of the principal limitations of these experiments was that the displacements of the shake table itself could not be measured independently. Although with the 2-Hz sinusoidal measurements, the input displacements were purely translational, Wang and others (2012) analysis of the data showed that the shake table also included rotational motions which affect horizontal inertial sensors like accelerometers and seismometers at first order. More recently, Ebinuma and Kato (2012) used a GPS simulator to electronically test several GNSS receivers and obtain the receiver characteristics at three frequencies: 1, 2, and 5 Hz. The results showed that the amplitude of 5-Hz displacements recorded by the GPS was, depending on the receiver model, between 30 and 125 percent more than the displacement input to the simulator. At low frequencies, the GPS displacement was nearly equal to the input displacement. In addition, Ebinuma and Kato (2012) examined how each receiver model amplified an earthquake displacement record in the 2–8 Hz band. The simulated earthquake was the 2008 moment magnitude (Mw) 6.8 Iwate-Miyagi earthquake where, for the simulated record, acceleration peaked at 1 G. The study discussed here builds on the tests by Ebinuma and Kato (2012), but rather than using electronic simulation, the tests are setup outdoors and closer to actual field installations of GNSS equipment. We used a one-dimensional shake table capable of 400 mm of displacement and high acceleration; the shake table also is constrained by a precision linear slider to have very low tilt that would affect inertial sensors. In addition, the stage position can be accurately monitored independent of the GNSS hardware and, importantly, provides a reference to compare with the estimated displacements from the GNSS data. Our tests spanned a greater frequency range from 0.2 to 20 Hz and we used equipment from three different manufacturers covering five different combinations of receivers and antennas. In addition, we have been able to simulate the frequency response of the GNSS equipment using a simple, causal filter. The quality of the filter was tested using additional test data where a step function in displacement was applied to the shake table. The observed displacements from the GNSS data show an overshoot in displacement at the time of the step or transition of the stage. That overshoot was accurately predicted using the filter design derived from our sinusoidal displacement tests. Similar to Wang and others (2012), we also examined the GPS displacement records using standard spectral techniques. However, we extended their work by evaluating several models of GNSS receivers using a variety of input frequencies. Because our shake table was limited on acceleration and displacement, we did not attempt to duplicate the high shaking associated with high magnitude earthquakes. However, because our shake table could measure the table displacement, we could directly compare the measured GPS displacements with the true displacements.

Open-File Report↗

Integration of seafloor point data in usSEABED

Sediments of the beach, nearshore, and continental shelves record a complex interplay of processes including wave energy and direction , currents, beach erosion or accretion, bluff or cliff retreat, fluvial input, sediment longshore and cross-shelf transport processes, contaminant content and transport, sediment sources and sinks, and others. In turn, sediments and rocks modify wave patterns, affect recreation and tourism, and provide habitat for fish, epifauna, and infauna. Character of the surficial seafloor also influences navigation, commercial and recreational fishing and gathering of other food sources, communication, piplines, national defense, and provides geologic resources including sand and gravel aggregates, minerals, and real or potential energy sources. The beaches, nearshore, and continental margins fall under overlapping levels of managerial responsibility between Federal, State, regional, and local government agencies and consortia. In addition, universities and other academic institutions investigate these places for pure or applied scientific reasons. Mapping is usually the first step in understanding any issue and is often comprised of remotely gathered geophysical data such as bathymetry and backscatter imagery, and groundtruthing; that is, the collection of physical and virtual samples to tie the remotely gathered data to reality. The physical samples are described and (or) carefully analyzed for grain-size information -- which records both the site's physical conditions and geologic past -- and commonly, for constituent components such as mineral and rock types (to determine onland sources and in situ chemical processes), carbonate and organic content and microfossils (for biological and oceanographic influences), and structure such as layering and bioturbation (for physical influences). The samples may also be subjected to physical tests such as comp[action analyses, liquefaction or plasticity limits, ans other parameters important when considering construction of offshore structures. In recent years, virtual sampling of the seafloor has become popular, through the use of towed video or photographic equipment and the addition of camera to oceanographic equipment such as corers and tripods. Before about ten years ago, most maps were made by hand. Recently, with the advent of desktop GIS packages, map making and resource analysis can be done nearly "on-the-fly" if geographically located data exist. While the problems of projection, scale, and resolution of digitized paper maps are commonly known amongst GIS-users, access to the original underlying point data allows for maps to be regenerated for digital use using statistically proven methods, provides increasing data density by including multiple studies, as well as allows the point data to be used in other ways than just mapping. These point data may be available in raw or refined or in worded descriptions. Raw data such as granulometric analyses can be manipulated through the use of known equations or empirical relationships to provide information about other parameters of the sediment, such as mean grainsize, sorting, erodability, or rugosity. If refined data are presented such as gravel, sand, and mud percentages, the parameter noted earlier may be estimated. In the case of worded descriptions, values for geologic terms can be assigned, for example, "fine sand" equate to 0.2 mm sized particles, to provide numeric terms for GIS or modeling purposes.

Conference Paper↗