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At least 19 recordsLinked to original sources

Hierarchical Bayesian Markov switching models with application to predicting spawning success of shovelnose sturgeon

The timing of spawning in fish is tightly linked to environmental factors; however, these factors are not very well understood for many species. Specifically, little information is available to guide recruitment efforts for endangered species such as the sturgeon. Therefore, we propose a Bayesian hierarchical model for predicting the success of spawning of the shovelnose sturgeon which uses both biological and behavioural (longitudinal) data. In particular, we use data that were produced from a tracking study that was conducted in the Lower Missouri River. The data that were produced from this study consist of biological variables associated with readiness to spawn along with longitudinal behavioural data collected by using telemetry and archival data storage tags. These high frequency data are complex both biologically and in the underlying behavioural process. To accommodate such complexity we developed a hierarchical linear regression model that uses an eigenvalue predictor, derived from the transition probability matrix of a two-state Markov switching model with generalized auto-regressive conditional heteroscedastic dynamics. Finally, to minimize the computational burden that is associated with estimation of this model, a parallel computing approach is proposed. ?? Journal compilation 2009 Royal Statistical Society.

Journal of the Royal Statistical Society. Series C↗

Can personality predict individual differences in brook trout spatial learning ability?

While differences in individual personality are common in animal populations, understanding the ecological significance of variation has not yet been resolved. Evidence suggests that personality may influence learning and memory; a finding that could improve our understanding of the evolutionary processes that produce and maintain intraspecific behavioural heterogeneity. Here, we tested whether boldness, the most studied personality trait in fish, could predict learning ability in brook trout. After quantifying boldness, fish were trained to find a hidden food patch in a maze environment. Stable landmark cues were provided to indicate the location of food and, at the conclusion of training, cues were rearranged to test for learning. There was a negative relationship between boldness and learning as shy fish were increasingly more successful at navigating the maze and locating food during training trials compared to bold fish. In the altered testing environment, only shy fish continued using cues to search for food. Overall, the learning rate of bold fish was found to be lower than that of shy fish for several metrics suggesting that personality could have widespread effects on behaviour. Because learning can increase plasticity to environmental change, these results have significant implications for fish conservation.

Behavioural Processes↗

Predator-prey interactions, resource depression and patch revisitation

Generalist predators may be confronted by different types of prey in different patches: sedentary and conspicuous, cryptic (with or without refugia), conspicuous and nonsocial, or conspicuous and social. I argue that, where encounter rates with prey are of most importance, patch revisitation should be a profitable tactic where prey have short 'recovery' times (conspicuous, nonsocial prey), or where anti-predator response (e.g. shoaling) may increase conspicuousness. Predictions are made for how temporal changes in prey encounter rates should affect revisit schedules and feeding rates for the 4 different prey types.

Behavioural Processes↗

Look what the cat dragged in: do parasites contribute to human cultural diversity?

If human culture emerges from the modal personality of a population, can global variation in parasitism that affects personality lead to cultural diversity among nations? The answer could help explain why people seem to vary so much from one land to another. Thomas et al. (2005) review how parasites manipulate behaviour, including human behaviour. To quote them, “The rabies virus lives in the brain, affording the virus ample opportunity to directly affect host behaviour. Rabid animals do show changes in behaviour, including increased aggression and biting.” Rabies affects a wide range of mammals and the aggressive biting associated with furious rabies appears to increase transmission. The personality transformation of infected humans can be horrifying, transforming loved ones into thrashing, baying beasts. Not coincidentally, in Europe, past periods of rabies outbreaks correspond to increases in werewolf trials. Although rabies can have a dramatic effect, the present rarity of human rabies cases and the availability of a vaccine, means that the behavioural effects of rabies are primarily an illustrative curiosity.

Behavioural Processes↗

A comparison of pectoral fin contact between two different wild dolphin populations

Contact behaviour involving the pectoral fin has been documented in a number of dolphin species, and various explanations about its function have been offered. Pectoral fin contact can take a variety of forms, and involves a number of body parts and movements, likely differing depending upon social or ecological context. For this study, we compare the pectoral fin contact behaviour of two species of wild dolphins: Indo-Pacific bottlenose dolphins (Tursiops aduncus) from around Mikura Island, Japan, and Atlantic spotted dolphins (Stenella frontalis) from The Bahamas. The two study populations exhibit surprising similarity in the ways in which pectoral fin contacts are used, despite differences in species and environmental conditions at the two sites. Differences in contact rates for calves between the two sites suggest that calf-focused aggression from adult dolphins is more prevalent at Mikura than in The Bahamas. Our results suggest that pectoral fin contact behaviour seems to be driven primarily by social pressures, and may be similar in function to allogrooming described in primates. ?? 2008 Elsevier B.V.

Behavioural Processes↗

Association, roost use and simulated disruption of Myotis septentrionalis maternity colonies

How wildlife social and resource networks are distributed on the landscape and how animals respond to resource loss are important aspects of behavioral ecology. For bats, understanding these responses may improve conservation efforts and provide insights into adaptations to environmental conditions. We tracked maternity colonies of northern bats ( Myotis septentrionalis ) at Fort Knox, Kentucky, USA to evaluate their social and resource networks and space use. Roost and social network structure differed between maternity colonies. Overall roost availability did not appear to be strongly related to network characteristics or space use. In simulations for our two largest networks, roost removal was related linearly to network fragmentation; despite this, networks were relatively robust, requiring removal of >20% of roosts to cause network fragmentation. Results from our analyses indicate that northern bat behavior and space use may differ among colonies and potentially across the maternity season. Simulation results suggest that colony social structure is robust to fragmentation caused by random loss of small numbers of roosts. Flexible social dynamics and tolerance of roost loss may be adaptive strategies for coping with ephemeral conditions in dynamic forest habitats.

Behavioural Processes↗

Plastic pikas: Behavioural flexibility in low-elevation pikas ( Ochotona princeps )

Behaviour is an important mechanism for accommodating rapid environmental changes. Understanding a species’ capacity for behavioural plasticity is therefore a key, but understudied, aspect of developing tractable conservation and management plans under climate-change scenarios. Here, we quantified behavioural differences between American pikas ( Ochotona princeps ) living in an atypical, low-elevation habitat versus those living in a more-typical, alpine habitat. With respect to foraging strategy, low-elevation pikas spent more time consuming vegetation and less time caching food for winter, compared to high-elevation pikas. Low-elevation pikas were also far more likely to be detected in forested microhabitats off the talus than their high-elevation counterparts at midday. Finally, pikas living in the atypical habitat had smaller home range sizes compared to those in typical habitat or any previously published home ranges for this species. Our findings indicate that behavioural plasticity likely allows pikas to accommodate atypical conditions in this low-elevation habitat, and that they may rely on critical habitat factors such as suitable microclimate refugia to behaviourally thermoregulate. Together, these results suggest that behavioural adjustments are one important mechanism by which pikas can persist outside of their previously appreciated dietary and thermal niches.

Oregon↗

Sexually dimorphic aggression indicates male gray wolves specialize in pack defense against conspecific groups

Aggression directed at conspecific groups is common among gregarious, territorial species, and for some species such as gray wolves ( Canis lupus ) intraspecific strife is the leading cause of natural mortality. Each individual in a group likely has different measures of the costs and benefits associated with a group task, such as an aggressive attack on another group, which can alter motivation and behavior. We observed 292 inter-pack aggressive interactions in Yellowstone National Park between 1 April 1995 and 1 April 2011 (>5300 days of observation) in order to determine the role of both sexes, and the influence of pack, age, and other traits on aggression. We recorded the behaviors and characteristics of all individuals present during the interactions (n = 534 individuals) and which individuals participated in each step (i.e. chase, attack, kill, flight) of the interaction. Overall, all wolves were more likely to chase rivals if they outnumbered their opponent, suggesting packs accurately assess their opponent’s size during encounters and individuals adjust their behavior based on relative pack size. Males were more likely than females to chase rival packs and gray-colored wolves were more aggressive than black-colored wolves. Male wolves and gray-colored wolves also recorded higher cortisol levels than females and black-colored wolves, indicating hormonal support for more intense aggressive behavior. Further, we found a positive correlation between male age and probability of chasing, while age-specific participation for females remained constant. Chasing behavior was influenced by the sex of lone intruders, with males more likely to chase male intruders. This difference in behavior suggests male and female wolves may have different strategies and motivations during inter-pack aggressive interactions related to gray wolf mating systems. A division of labor between pack members concerning resource and territory defense suggests selection for specific traits related to aggression is an adaptive response to intense competition between groups of conspecifics.

Behavioural Processes↗

A new approach to the study of relationship quality in dolphins: framework and preliminary results

Proximity and synchronous behaviours from surface observations have been used to measure association patterns within and between dolphin dyads. To facilitate an investigation of relationship quality in dolphins, we applied a method used for chimpanzees and ravens that examined three main components to describe relationships: value, security, and compatibility. Using pilot data from a long-term study of two study populations for this preliminary assessment, these three components were extracted from PCA analysis of eight behavioural variables with more than 80% variance accounted for in both study groups. Only pair swim position differed between groups. Although value, security, and compatibility are abstract terms, each is based on behaviours identified as important in dolphin social life, at least for these two populations. Examining relationship quality in dolphins with a method used to illustrate dyadic differences for chimpanzees and ravens allows for a quantitative, comparative assessment of sociality across disparate taxa. Although these three species are diverse in their anatomies and in their social habitats (e.g., aquatic, terrestrial, aerial), they may well share the basic societal building blocks in the factors affecting how relationships are formed. We discuss how an examination of these behavioural variables facilitates understanding relationship quality in dolphins, as well as how dolphin relationships fit into the context of social animals’ society.

Bimini Islands, Great Bahama Bank, Roatan Island↗

A sociogram for the cranes of the world

The behavioral repertoire for the world's 15 species of cranes includes over 100 behavioral acts with clear social significance. Each species performs at least 60 discrete social postures, vocalizations, displays, and activities. Because all but a handful of the stereotyped social displays are common to all species, the presence or absence of social displays was useful only to a limited degree in comparing the relatedness of established crane taxonomic groups. However, the breadth of the repertoire for each species and for the family Gruidae tentatively places cranes at the apex of social complexity (at least for stereotyped displays) in the animal world.

Behavioural Processes↗

Integrated Environmental Modelling: Human decisions, human challenges

Integrated Environmental Modelling (IEM) is an invaluable tool for understanding the complex, dynamic ecosystems that house our natural resources and control our environments. Human behaviour affects the ways in which the science of IEM is assembled and used for meaningful societal applications. In particular, human biases and heuristics reflect adaptation and experiential learning to issues with frequent, sharply distinguished, feedbacks. Unfortunately, human behaviour is not adapted to the more diffusely experienced problems that IEM typically seeks to address. Twelve biases are identified that affect IEM (and science in general). These biases are supported by personal observations and by the findings of behavioural scientists. A process for critical analysis is proposed that addresses some human challenges of IEM and solicits explicit description of (1) represented processes and information, (2) unrepresented processes and information, and (3) accounting for, and cognizance of, potential human biases. Several other suggestions are also made that generally complement maintaining attitudes of watchful humility, open-mindedness, honesty and transparent accountability. These suggestions include (1) creating a new area of study in the behavioural biogeosciences, (2) using structured processes for engaging the modelling and stakeholder communities in IEM, and (3) using ‘red teams’ to increase resilience of IEM constructs and use.

Geological Society of London Special Publications↗

A horizon scanning assessment of current and potential future threats to migratory shorebirds

We review the conservation issues facing migratory shorebird populations that breed in temperate regions and use wetlands in the non-breeding season. Shorebirds are excellent model organisms for understanding ecological, behavioural and evolutionary processes and are often used as indicators of wetland health. A global team of experienced shorebird researchers identified 45 issues facing these shorebird populations, and divided them into three categories (natural, current anthropogenic and future issues). The natural issues included megatsunamis, volcanoes and regional climate changes, while current anthropogenic threats encompassed agricultural intensification, conversion of tidal flats and coastal wetlands by human infrastructure developments and eutrophication of coastal systems. Possible future threats to shorebirds include microplastics, new means of recreation and infectious diseases. We suggest that this review process be broadened to other taxa to aid the identification and ranking of current and future conservation actions.

Ibis↗

A protocol for assessing bias and robustness of social network metrics using GPS based radio-telemetry data

Background Social network analysis of animal societies allows scientists to test hypotheses about social evolution, behaviour, and dynamic processes. However, the accuracy of estimated metrics depends on data characteristics like sample proportion, sample size, and frequency. A protocol is urgently needed to assess for bias and robustness of social network metrics estimated for the animal populations especially when a limited number of individuals are monitored. Methods We used GPS telemetry datasets of five ungulate species to combine known social network approaches with novel ones into a comprehensive five-step protocol. To quantify the bias and uncertainty in the network metrics obtained from a partial population, we presented novel statistical methods which are particularly suited for autocorrelated data, such as telemetry relocations. The protocol was validated using a sixth species, the fallow deer, with a known population size where ⇠ 85% of the individuals have been directly monitored. Results Through the protocol, we demonstrated how pre-network data permu tations allow researchers to assess non-random aspects of interactions within a population. The protocol assesses bias in global network metrics, obtains confidence intervals, and quantifies uncertainty of global and node-level network metrics based on the number of nodes in the network. We found that global network metrics like density remained robust even with a lowered sample size, while local network metrics like eigenvector centrality were unreliable for four of the species. The fallow deer network showed low uncertainty and bias even at lower sampling proportions, indicating the importance of a thoroughly sampled population while demonstrating the accuracy of our evaluation methods for smaller samples. Conclusions The protocol allows researchers to analyse GPS-based radio telemetry or other data to determine the reliability of social network metrics. The estimates enable the statistical comparison of networks under di↵erent conditions, such as analysing daily and seasonal changes in the density of a network. The methods can also guide methodological decisions in animal social network research, such as sampling design and allow more accurate ecological inferences from the available data. The R package aniSNA enables researchers to implement this workflow on their dataset, generating reliable inferences and guiding methodological decisions

Article↗

On the interface between cultural transmission, phenotypic diversity, demography and the conservation of migratory ungulates

Recent evidence indicates that green-wave surfing behaviour in ungulates and the migrations that stem from this behaviour are socially learned, culturally transmitted across generations and become more efficient via cumulative cultural evolution. But given a lack of corroborative evidence, whether ungulate migration is a cultural phenomenon remains a hypothesis deserving of further testing. In this opinion piece, we summarize the role memory and social learning play in the green-wave surfing that underlies ungulate migration, and when combined with the natural history of ungulates, we argue that the most likely mechanism for maintenance of ungulate migration is animal culture. We further our argument by providing a synopsis of processes that promote diversification of migratory behaviour and link these processes to their emergent ecological patterns, which are common in nature but have not historically been considered as potential cultural phenomena. The notion that diverse portfolios of migratory behaviour may buffer populations from environmental change emerges from this synthesis but requires empirical testing. Finally, we contend that, because the migratory behaviour of ungulates stems largely from cultural transmission as opposed to a genetic programme, the diversity of observed migratory strategies represents ‘culturally significant units’ deserving of the same conservation effort afforded to evolutionarily significant units.

Wyoming↗

Hydrogeomorphic processes of thermokarst lakes with grounded-ice and floating-ice regimes on the Arctic coastal plain, Alaska

Thermokarst lakes cover > 20% of the landscape throughout much of the Alaskan Arctic Coastal Plain (ACP) with shallow lakes freezing solid (grounded ice) and deeper lakes maintaining perennial liquid water (floating ice). Thus, lake depth relative to maximum ice thickness (1·5–2·0 m) represents an important threshold that impacts permafrost, aquatic habitat, and potentially geomorphic and hydrologic behaviour. We studied coupled hydrogeomorphic processes of 13 lakes representing a depth gradient across this threshold of maximum ice thickness by analysing remotely sensed, water quality, and climatic data over a 35-year period. Shoreline erosion rates due to permafrost degradation ranged from < 0·2 m/year in very shallow lakes (0·4 m) up to 1·8 m/year in the deepest lakes (2·6 m). This pattern of thermokarst expansion masked detection of lake hydrologic change using remotely sensed imagery except for the shallowest lakes with stable shorelines. Changes in the surface area of these shallow lakes tracked interannual variation in precipitation minus evaporation (P − E L ) with periods of full and nearly dry basins. Shorter-term (2004–2008) specific conductance data indicated a drying pattern across lakes of all depths consistent with the long-term record for only shallow lakes. Our analysis suggests that grounded-ice lakes are ice-free on average 37 days longer than floating-ice lakes resulting in a longer period of evaporative loss and more frequent negative P − E L . These results suggest divergent hydrogeomorphic responses to a changing Arctic climate depending on the threshold created by water depth relative to maximum ice thickness in ACP lakes.

Alaska↗

Modelling the transport and deposition of ash following a magnitude 7 eruption: The distal Mazama tephra

Volcanic ash transport and dispersion models (VATDMs) are necessary for forecasting tephra dispersal during volcanic eruptions and are a useful tool for estimating the eruption source parameters (ESPs) of prehistoric eruptions. Here we use Ash3D, an Eulerian VATDM, to simulate the tephra deposition from the ~ 7.7 ka climactic eruption of Mount Mazama. We investigate how best to apply a VATDM using the ESPs characteristic of a large magnitude eruption (M ≥ 7). We simplify the approach to focus on the distal deposit as if it were formed by a single phase of Plinian activity. Our results demonstrate that it is possible to use modern wind profiles to simulate the tephra dispersal from a prehistoric eruption; however, this introduces an inherent uncertainty to the subsequent simulations where we explore different ESPs. We show, using the well-documented distal Mazama tephra, that lateral umbrella cloud spreading, rather than advection–diffusion alone, must be included in the VATDM to reproduce the width of the isopachs. In addition, the Ash3D particle size distribution must be modified to simulate the transport and deposition of distal fine-grained (< 125 µm) Mazama ash. With these modifications, the Ash3D simulations reproduce the thickness and grain size of the Mazama tephra deposit. Based on our simulations, however, we conclude that the exact relationship between mass eruption rate and the scale of umbrella cloud spreading remains unresolved. Furthermore, for ground-based grain size distributions to be input directly into Ash3D, further research is required into the atmospheric and particle processes that control the settling behaviour of fine volcanic ash.

Bulletin of Volcanology↗

Analysis of a municipal wastewater treatment plant using a neural network-based pattern analysis

This paper addresses the problem of how to capture the complex relationships that exist between process variables and to diagnose the dynamic behaviour of a municipal wastewater treatment plant (WTP). Due to the complex biological reaction mechanisms, the highly time-varying, and multivariable aspects of the real WTP, the diagnosis of the WTP are still difficult in practice. The application of intelligent techniques, which can analyse the multi-dimensional process data using a sophisticated visualisation technique, can be useful for analysing and diagnosing the activated-sludge WTP. In this paper, the Kohonen Self-Organising Feature Maps (KSOFM) neural network is applied to analyse the multi-dimensional process data, and to diagnose the inter-relationship of the process variables in a real activated-sludge WTP. By using component planes, some detailed local relationships between the process variables, e.g., responses of the process variables under different operating conditions, as well as the global information is discovered. The operating condition and the inter-relationship among the process variables in the WTP have been diagnosed and extracted by the information obtained from the clustering analysis of the maps. It is concluded that the KSOFM technique provides an effective analysing and diagnosing tool to understand the system behaviour and to extract knowledge contained in multi-dimensional data of a large-scale WTP. ?? 2003 Elsevier Science Ltd. All rights reserved.

Water Research↗

Mixing of carbonate waters

When mineral solutions of different compositions are mixed, the molalities and activities of individual ions in the mixture are often non-linear functions of their end-member values. This non-linearity is particularly significant in determining mineral saturation levels. Mixtures of saturated solutions may be either undersaturated or supersaturated depending on the end-member compositions and the physical conditions in which end-members and their mixtures exist. In carbonate solutions important non-linear effects occur due to redistribution of carbonate species. In extreme cases this causes mixture pH to be below both the end-member pH values. A simple but precise computer program (WATMIX) has been developed for calculating mixture composition for closed and open system mixing of arbitrary end-members. A number of mixing examples are considered which allow one to isolate three important processes leading to non-linear behaviour: the algebraic effect, the δP CO 2 effect, and the ionic strength effect.

Geochimica et Cosmochimica Acta↗