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A new map of standardized terrestrial ecosystems of Africa

Terrestrial ecosystems and vegetation of Africa were classified and mapped as part of a larger effort and global protocol (GEOSS – the Global Earth Observation System of Systems), which includes an activity to map terrestrial ecosystems of the earth in a standardized, robust, and practical manner, and at the finest possible spatial resolution. To model the potential distribution of ecosystems, new continental datasets for several key physical environment datalayers (including coastline, landforms, surficial lithology, and bioclimates) were developed at spatial and classification resolutions finer than existing similar datalayers. A hierarchical vegetation classification was developed by African ecosystem scientists and vegetation geographers, who also provided sample locations of the newly classified vegetation units. The vegetation types and ecosystems were then mapped across the continent using a classification and regression tree (CART) inductive model, which predicted the potential distribution of vegetation types from a suite of biophysical environmental attributes including bioclimate region, biogeographic region, surficial lithology, landform, elevation and land cover. Multi-scale ecosystems were classified and mapped in an increasingly detailed hierarchical framework using vegetation-based concepts of class, subclass, formation, division, and macrogroup levels. The finest vegetation units (macrogroups) classified and mapped in this effort are defined using diagnostic plant species and diagnostic growth forms that reflect biogeographic differences in composition and sub-continental to regional differences in mesoclimate, geology, substrates, hydrology, and disturbance regimes (FGDC, 2008). The macrogroups are regarded as meso-scale (100s to 10,000s of hectares) ecosystems. A total of 126 macrogroup types were mapped, each with multiple, repeating occurrences on the landscape. The modeling effort was implemented at a base spatial resolution of 90 m. In addition to creating several rich, new continent-wide biophysical datalayers describing African vegetation and ecosystems, our intention was to explore feasible approaches to rapidly moving this type of standardized, continent-wide, ecosystem classification and mapping effort forward.

African Geographical Review

GIS Representation of Coal-Bearing Areas in Africa

The African continent contains approximately 5 percent of the world's proven recoverable reserves of coal (World Energy Council, 2007). Energy consumption in Africa is projected to grow at an annual rate of 2.3 percent from 2004 through 2030, while average consumption in first-world nations is expected to rise at 1.4 percent annually (Energy Information Administration, 2007). Coal reserves will undoubtedly continue to be part of Africa's energy portfolio as it grows in the future. A review of academic and industrial literature indicates that 27 nations in Africa contain coal-bearing rock. South Africa accounts for 96 percent of Africa's total proven recoverable coal reserves, ranking it sixth in the world. This report is a digital compilation of information on Africa's coal-bearing geology found in the literature and is intended to be used in small scale spatial investigations in a Geographic Information System (GIS) and as a visual aid for the discussion of Africa's coal resources. Many maps of African coal resources often include points for mine locations or regional scale polygons with generalized borders depicting basin edges. Point locations are detailed but provide no information regarding extent, and generalized polygons do not have sufficient detail. In this dataset, the polygons are representative of the actual coal-bearing lithology both in location and regional extent. Existing U.S. Geological Survey (USGS) digital geology datasets provide the majority of the base geologic polygons. Polygons for the coal-bearing localities were clipped from the base geology that represented the age and extent of the coal deposit as indicated in the literature. Where the 1:5,000,000-scale geology base layer's ages conflicted with those in the publications, polygons were generated directly from the regional African coal maps (1:500,000 scale, approximately) in the published material. In these cases, coal-bearing polygons were clipped to the literature's indicated coal extent, without regard to the underlying geology base or topographic constraints. Indication of the presence of African coal is based on multiple sources. However, the quality of the sources varies and there is often disagreement in the literature. This dataset includes the rank, age, and location of coal in Africa as well as the detailed source information responsible for each coal-bearing polygon. The dataset is not appropriate for use in resource assessments of any kind. Attributes necessary for tasks, such as number of coal seams, thickness of seams, and depth to coal are rarely provided in the literature and accordingly not represented in this data set. Small-scale investigations, representations and display uses are most appropriate for this product. This product is the first to show coal distribution as bounded by actual geologic contacts for the entire African continent. In addition to the spatial component of this dataset, complete references to source material are provided for each polygon, making this product a useful first step resource in African coal research. Greater detail regarding the creation of this dataset as well as the sources used is provided in the metadata file for the Africa_coal.shp file.

Open-File Report

Lower lethal temperatures for nonnative freshwater fishes in Everglades National Park, Florida

Temperature is an important factor that shapes biogeography and species composition. In southern Florida, the tolerance of nonnative freshwater fishes to low temperatures is a critical factor in delineating their geographic spread. In this study, we provide empirical information on experimentally derived low-temperature tolerance limits of Banded Cichlid Heros severus and Spotfin Spiny Eel Macrognathus siamensis, two nonnative Everglades fishes that were lacking data, and African Jewelfish Hemichromis letourneuxi and Mayan Cichlid Cichlasoma urophthalmus, species for which previous results were derived from studies with small sample sizes. We also provide a literature review summarizing the current state of knowledge of low-temperature tolerances for all 17 nonnative freshwater fishes that have been found in Everglades National Park. Mean lower lethal temperature tolerances ranged from 4°C (Orinoco Sailfin Catfish Pterygoplichthys multiradiatus) to 16.1°C (Butterfly Peacock Bass Cichla ocellaris). These low-temperature limits may inform the understanding of the ecological role or influence of nonnative fishes and may lead to potential management opportunities and applications.

Florida

Richness and diversity of helminth communities in tropical freshwater fishes: Empirical evidence

Aim: Published information on the richness and diversity of helminth parasite communities in tropical freshwater fishes is reviewed in response to expectations of species-rich parasite communities in tropical regions. Location: Areas covered include the tropics and some subtropical areas. In addition, the north temperate area of the nearctic zone is included for comparison. Methods: Data from 159 communities in 118 species of tropical freshwater fish, summarized from 46 published studies, were used for this review. Parasite community descriptors used in the analyses included component community richness and calculated mean species richness. Data from 130 communities in 47 species of nearctic north temperate freshwater fish were summarized from 31 studies and used for comparison. Results: The component helminth communities of many tropical freshwater fish are species-poor, and considerable proportions of fish from certain parts of the tropics, e.g. West African drainages, are uninfected or lightly infected. Mean helminth species richness was low and equaled or exceeded 2.0 in only 22 of 114 communities. No single group of helminths was identified as a dominant component of the fauna and species composition was variable among and within broader geographical areas. The richest enteric helminth assemblages were found in mochokid and clariid catfish with a mixed carnivorous diet, whereas algal feeders, herbivores and detritivores generally had species-poor gut helminth communities. Comparisons indicated that certain areas in the north temperate region had higher helminth species richness in fishes than areas in the tropics. Main conclusions: Expectations of high species richness in helminth communities of tropical freshwater fishes are not fulfilled by the data. Direct comparisons of infracommunities and component communities in host species across widely separated phylogenetic and geographical lines are inappropriate. Examination of latitudinal differences in richness of monophyletic parasite groups or of compound communities may uncover patterns different from those found in this study. Richness of helminth communities may be ultimately determined not by the number of host species present but by the degree of divergence of host lineages and by their diversification modes. A phylogenetic framework for hosts and parasites will reveal if increased host species richness within host clades, when host speciation is accompanied by habitat or diet specialization, or both, leads to lower helminth diversity in host species by fragmentation of a core helminth fauna characteristic or specific of the larger host clade. This pattern may be analysed in the context of cospeciation and acquisition from other unrelated hosts (host-sharing or host-switching).

Journal of Biogeography

Mineral potential for sediment-hosted copper deposits in the Islamic Republic of Mauritania (phase V, deliverable 75)

The presence of Neoproterozoic through Cambrian, continental, siliciclastic sedimentary rocks interbedded with dolomitic carbonates, shales, and glacial tillites similar to the Katanga Supergroup host rocks of the Central African Copperbelt and other sediment-hosted copper-bearing Proterozoic sequences worldwide, is first order criteria for consideration of the Neoproterozoic units of the Taoudeni Basin in Mauritania as prospective for sediment-hosted copper deposits. Review of the National Mineral Occurrences Database (Marsh and Anderson, 2015) and previous literature suggest that only a handful of small sediment-hosted copper occurrences have been found to date in Mauritania and that the resource potential for this deposit type is low. In the northern Taoudeni Basin, the most important occurrence is at Taradent. This occurrence consists of three mineralized horizons in the lower Neoproterozoic Char Group in three outcrop areas separated by alluvium over a strike length of 12 kilometers (km). The most extensively mineralized horizon consists of malachite and disseminated copper sulfides, and is concentrated at the base of a dolomitic interval, consistent with a reduced faciestype sediment-hosted copper deposit model. Additional and poorly described copper occurrences in the Taoudeni Basin margin sedimentary rocks in northeastern Mauritania, such as Chegga Guettatira and Sidi Bara, may be sediment-hosted copper occurrences and extend the potential throughout this portion of the Basin. Additional potential for sediment-hosted copper deposits is indicated in reports by the British Geological Survey (BGS; Gunn and others, 2004) and BRGM (Salpeteur, 2005) in the Neoproterozoic-Cambrian sedimentary rocks (Teniagouri Group) of the central and southern Taoudeni Basin at a number of occurrences in the vicinity of Fouges, Weringuel, and Gig Zig. These occurrences exhibit characteristics consistent with a reduced-facies-type sediment-hosted copper deposit model and based on correlation of similar host rocks extend the potential throughout the entire Taoudeni Basin margin. Very poorly described copper occurrences in the northeastern and southeastern part of the Basin at Kreb en Naga, Kreb en Naga SW, Berbere, Dhar Nema, Dhar Nema 2, Saile, and Nejam-Medroume all are described as occurring in sedimentary rocks and are hosted by or are in close proximity to voluminous outcrops of Jurassic microgabbros (also referred to as dolerite or diabase). Uncertainty exists as to whether they are sediment-hosted copper occurrences. They are likely more closely analogous to copper occurrences associated with mafic igneous activity. The determination of whether reported copper occurrences and associated sedimentary rocks at Kreb en Naga and Kreb en Naga SW in the northeastern Taoudeni Basin and the Dhar Nema occurrences in the southeastern Taoudeni are permissive of sediment-hosted copper mineralization was inconclusive due to the absence of copper showings. While sedimentary host rocks at these locations must be broadly considered permissive, the absence of other favorable geologic features in these areas indicates that the potential for mineral deposits of this type is low. The widespread presence of mafic sills and dikes of Jurassic age throughout these areas and descriptions of associated minor copper mineralization suggests that many of the copper occurrences in these areas are not of the sediment-hosted copper type. Highly speculative potential exists in the Coastal Basin for Revett-type copper deposits in unexposed Jurassic-Cretaceous sandstones that may contain structural traps with gas accumulations. Eocene continental red bed sandstones of the Gorgol Formation, where overlain by the shallow marine sedimentary rocks of the Rinndiao Formation, represent an additional low potential rock sequence within the southeastern portion of the Coastal Basin that is permissive of sediment-hosted copper deposits. Field examinations of outcrop areas in the vicinity of many of the known occurrences were performed in late 2007 to provide additional criteria for evaluating the potential for this type of mineralization in Mauritania. In general, the geographic coordinates of occurrences are imprecise and many of the occurrences could not be located. Examination of outcrops of the Char Group in the Taradent area confirms the permissive nature of these rocks for reduced-facies-type sediment-hosted copper deposits. Inspection of weak copper mineralization hosted by black shales at several occurrences in the Gadel-Maylime area confirms that these occurrences are also of the reduced-faciestype and that the black and green shales of the Bouly and Ould Yenje Formations are permissive. Reported copper analyses up to 0.75 percent copper at Taradent and a single analysis of mineralized shale in the Gadel-Maylime area containing 0.55 percent copper indicate that low grade ore material exists at these locations. However indications that such copper grades are continuous over significant intervals and present in large tonnages are lacking. Although mineral occurrence data and descriptive geological information are adequate to delineate areas favorable for sediment-hosted copper deposits, this review indicates that potential for this type of deposit in Mauritania is low.

Open-File Report