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At least 1,729 records · Page 96Linked to original sources
USGS2000

Estimates of population change in selected species of tropical birds using mark-recapture data

The population biology of tropical birds is known for a only small sample of species; especially in the Neotropics. Robust estimates of parameters such as survival rate and finite rate of population change (A) are crucial for conservation purposes and useful for studies of avian life histories. We used methods developed by Pradel (1996, Biometrics 52:703-709) to estimate A for 10 species of tropical forest lowland birds using data from a long-term (> 20 yr) banding study in Panama. These species constitute a ecologically and phylogenetically diverse sample. We present these estimates and explore if they are consistent with what we know from selected studies of banded birds and from 5 yr of estimating nesting success (i.e., an important component of A). A major goal of these analyses is to assess if the mark-recapture methods generate reliable and reasonably precise estimates of population change than traditional methods that require more sampling effort.

Book chapter↗
USGS2018

Methods to reduce conflicts between cranes and farmers

Alternative methods to reduce conflicts between cranes and farmers range from relatively simple, inexpensive disturbance methods to changes in land use at a landscape scale. Visual and acoustics disturbance methods can be useful for small fields or gardens but require frequent changes to prevent habituation by the cranes. Changes in farming practices can be implemented by individual farmers and matched to the local situation. By altering timing of seeding and harvest, harvest methods, and other management practices, farmers can minimize the vulnerability of the crop or its attractiveness to cranes. Crop damage can be reduced by strategically locating high-risk crops away from crane roosts or high-use areas. Diversionary fields, where cranes can forage on nutritious, preferred foods near their roost without disturbance, are one of the more effective methods to reduce crop damage. Artificial feeding may be appropriate as a temporary measure but its long-term use should only be a last option where no alternative wintering areas or food resources are available or restorable. Chemical treatment of seeds can deter cranes from taking newly sown seeds and seedlings. Conflicts with farmers can be mitigated by financial or other compensation, or through conservation approaches. Financial mechanisms should be used cautiously as they can dilute or corrupt local traditions of tolerance. An integrated approach, using several methods, is more likely to be effective in the long term. Farmers and communities are more likely to embrace alternative measures if they understand basic crane ecology and if the measures are clearly beneficial to the farmers. Developing a broader range of tools to better understand the conflict, to understand farmer perceptions of cranes, and to help implement strategies to improve positivist attitudes is necessary. Multi-disciplinary approaches that incorporate social, economic as well as ecological aspects of the issue are very rare, and much needed to develop workable solutions.

Book chapter↗
USGS2020

Habitat of the endangered salt marsh harvest mouse (Reithrodontomys raviventris) in San Francisco Bay

Understanding habitat associations is vital for conservation of at‐risk marsh‐endemic wildlife species, particularly those under threat from sea level rise. We modeled environmental and habitat associations of the marsh‐endemic, Federally endangered salt marsh harvest mouse ( Reithrodontomys raviventris , RERA) and co‐occurrence with eight associated small mammal species from annual trap data, 1998–2014, in six estuarine marshes in North San Francisco Bay, California. Covariates included microhabitat metrics of elevation and vegetation species and cover; and landscape metrics of latitude–longitude, distance to anthropogenic features, and habitat patch size. The dominant cover was pickleweed ( Salicornia pacifica ) with 86% mean cover and 37 cm mean height, and bare ground with about 10% mean cover. We tested 38 variants of Bayesian network (BN) models to determine covariates that best account for presence of RERA and of all nine small mammal species. Best models had lowest complexity and highest classification accuracy. Among RERA presence models, three best BN models used covariates of latitude–longitude, distance to paved roads, and habitat patch size, with 0% error of false presence, 20% error of false nonpresence, and 20% overall error. The all‐species presence models suggested that within the pickleweed marsh environment, RERA are mostly habitat generalists. Accounting for presence of other species did not improve prediction of RERA. Habitat attributes compared between RERA and the next most frequently captured species, California vole ( Microtus californicus ), suggested substantial habitat overlap, with RERA habitat being somewhat higher in marsh elevation, greater in percent cover of the dominant plant species, closer to urban areas, further from agricultural areas, and, perhaps most significant, larger in continuous size of marsh patch. Findings will inform conservation management of the marsh environment for RERA by identifying best microhabitat elements, landscape attributes, and adverse interspecific interactions.

California↗
USGS2024

Range-wide population genomic structure of the Karner blue butterfly, Plebejus (Lycaeides) samuelis

The Karner blue butterfly, Plebejus ( Lycaeides ) samuelis , is an endangered North American climate change-vulnerable species that has undergone substantial historical habitat loss and population decline. To better understand the species' genetic status and support Karner blue conservation, we sampled 116 individuals from 22 localities across the species' geographical range in Wisconsin (WI), Michigan (MI), Indiana (IN), and New York (NY). Using genomic analysis, we found that these samples were divided into three major geographic groups, NY, WI, and MI-IN, with populations in WI and MI-IN each further divided into three subgroups. A high level of inbreeding was revealed by inbreeding coefficients above 10% in almost all populations in our study. However, strong correlation between F ST and geographical distance suggested that genetic divergence between populations increases with distance, such that introducing individuals from more distant populations may be a useful strategy for increasing population-level diversity and preserving the species. We also found that Karner blue populations had lower genetic diversity than closely related species and had more alleles that were present only at low frequencies (<5%) in other species. Some of these alleles may negatively impact individual fitness and may have become prevalent in Karner blue populations due to inbreeding. Finally, analysis of these possibly deleterious alleles in the context of predicted three-dimensional structures of proteins revealed potential molecular mechanisms behind population declines, providing insights for conservation. This rich new range-wide understanding of the species' population genomic structure can contextualize past extirpations and help conserve and even enhance Karner blue genetic diversity.

Indiana, Michigan, Wisconsin↗
USGS2025

Moose survival and habitat‐associated risk of endoparasites

Parasite-induced morbidity and mortality can alter the trajectories of incidental host populations. Yet, parasites rarely act in isolation and may be one of a multitude of biotic and abiotic stressors that collectively shape mortality risk in vertebrate populations. We quantified sources of mortality in a low-density population of moose ( Alces alces ) in New York State and investigated factors including parasite infection, nutritional limitation, and thermal stress influencing mortality risk in calf moose. We observed high rates of annual survival (0.81–0.92) in adult ( n = 25) and calf ( n = 27) moose monitored 2015–2018 and 2022–2024, respectively. The majority of cause-specific mortality was attributed to disease induced by giant liver fluke ( Fascioloides magna ; 75% in adults, 67% in calves). Calf mortality risk increased by 72% for every unit increase in giant liver fluke infection risk, measured as cumulative monthly proportion of wetlands used by moose, and decreased by 16% with each additional unit of nutritional energy available. The combination of flukes, coinfecting parasites, and available nutritional energy is important to calf survival in this population, highlighting the importance of managing multiple stressors for species conservation, although the effects are hard to disentangle given the high rates of survival observed. Identifying causes of mortality and mechanisms underlying increased mortality risk contributes to the continued conservation of moose in fluctuating populations and highlights the importance of managing parasite-induced disease.

New York↗
USGS2016

Designing occupancy studies when false-positive detections occur

1.Recently, estimators have been developed to estimate occupancy probabilities when false-positive detections occur during presence-absence surveys. Some of these estimators combine different types of survey data to improve estimates of occupancy. With these estimators, there is a tradeoff between the number of sample units surveyed, and the number and type of surveys at each sample unit. Guidance on efficient design of studies when false positives occur is unavailable. 2.For a range of scenarios, I identified survey designs that minimized the mean square error of the estimate of occupancy. I considered an approach that uses one survey method and two observation states and an approach that uses two survey methods. For each approach, I used numerical methods to identify optimal survey designs when model assumptions were met and parameter values were correctly anticipated, when parameter values were not correctly anticipated, and when the assumption of no unmodelled detection heterogeneity was violated. 3.Under the approach with two observation states, false positive detections increased the number of recommended surveys, relative to standard occupancy models. If parameter values could not be anticipated, pessimism about detection probabilities avoided poor designs. Detection heterogeneity could require more or fewer repeat surveys, depending on parameter values. If model assumptions were met, the approach with two survey methods was inefficient. However, with poor anticipation of parameter values, with detection heterogeneity, or with removal sampling schemes, combining two survey methods could improve estimates of occupancy. 4.Ignoring false positives can yield biased parameter estimates, yet false positives greatly complicate the design of occupancy studies. Specific guidance for major types of false-positive occupancy models, and for two assumption violations common in field data, can conserve survey resources. This guidance can be used to design efficient monitoring programs and studies of species occurrence, species distribution, or habitat selection, when false positives occur during surveys.

Methods in Ecology and Evolution↗
USGS2011

Comparison of statistical and theoretical habitat models for conservation planning: The benefit of ensemble prediction

Selection of a modeling approach is an important step in the conservation planning process, but little guidance is available. We compared two statistical and three theoretical habitat modeling approaches representing those currently being used for avian conservation planning at landscape and regional scales: hierarchical spatial count (HSC), classification and regression tree (CRT), habitat suitability index (HSI), forest structure database (FS), and habitat association database (HA). We focused our comparison on models for five priority forest-breeding species in the Central Hardwoods Bird Conservation Region: Acadian Flycatcher, Cerulean Warbler, Prairie Warbler, Red-headed Woodpecker, and Worm-eating Warbler. Lacking complete knowledge on the distribution and abundance of each species with which we could illuminate differences between approaches and provide strong grounds for recommending one approach over another, we used two approaches to compare models: rank correlations among model outputs and comparison of spatial correspondence. In general, rank correlations were significantly positive among models for each species, indicating general agreement among the models. Worm-eating Warblers had the highest pairwise correlations, all of which were significant ( P , 0.05). Red-headed Woodpeckers had the lowest agreement among models, suggesting greater uncertainty in the relative conservation value of areas within the region. We assessed model uncertainty by mapping the spatial congruence in priorities (i.e., top ranks) resulting from each model for each species and calculating the coefficient of variation across model ranks for each location. This allowed identification of areas more likely to be good targets of conservation effort for a species, those areas that were least likely, and those in between where uncertainty is higher and thus conservation action incorporates more risk. Based on our results, models developed independently for the same purpose (conservation planning for a particular species in a particular geography) yield different answers and thus different conservation strategies. We assert that using only one habitat model (even if validated) as the foundation of a conservation plan is risky. Using multiple models (i.e., ensemble prediction) can reduce uncertainty and increase efficacy of conservation action when models corroborate one another and increase understanding of the system when they do not.

Ecological Applications↗
USGS2014

Ancient fish and recent invaders: white sturgeon Acipenser transmontanus diet response to invasive-species-mediated changes in a benthic prey assemblage

Invasive organisms can have significant impacts on native species, and the San Francisco Estuary (SFE), California, USA, is one of the world's most invaded estuaries. Decline of native white sturgeon Acipenser transmontanus abundance in the SFE has been acknowledged, but underlying mechanisms are poorly understood. Invasion by the overbite clam Potamocorbula amurensis has drastically altered the SFE benthic prey community, yet little is known about how this change has affected sturgeon diets. We investigated changes in the diet of white sturgeon following the overbite clam invasion and subsequent shift in the SFE benthic prey assemblage. Gut content analysis was used to compare white sturgeon prey composition and importance between the pre- and post-invasion periods. Additionally, stable isotope analysis was employed to estimate the assimilation of prey items to sturgeon biomass. Overbite clams dominated diets in the post-invasion period, accounting for 82 to 93% of total volume. Stable isotope analysis confirmed the importance of this prey item, although their assimilated contribution to sturgeon biomass was estimated to be less (70 to 83%) than gut contents indicated. The frequency of fish in white sturgeon guts increased in the post-invasion period, and isotope analysis indicated relatively large contributions of fish to sturgeon biomass (3.7 to 19%). The trophic adaptability of white sturgeon has allowed them to exploit this new prey source (overbite clam). Future conservation and restoration efforts must consider a potentially destabilized food web given the large importance of a single prey item.

Marine Ecology Progress Series↗
USGS2015

Factors affecting female space use in ten populations of prairie chickens

Conservation of wildlife depends on an understanding of the interactions between animal movements and key landscape factors. Habitat requirements of wide-ranging species often vary spatially, but quantitative assessment of variation among replicated studies at multiple sites is rare. We investigated patterns of space use for 10 populations of two closely related species of prairie grouse: Greater Prairie-Chickens ( Tympanuchus cupido ) and Lesser Prairie-Chickens ( T. pallidicinctus ). Prairie chickens require large, intact tracts of native grasslands, and are umbrella species for conservation of prairie ecosystems in North America. We used resource utilization functions to investigate space use by female prairie chickens during the 6-month breeding season from March through August in relation to lek sites, habitat conditions, and anthropogenic development. Our analysis included data from 382 radio-marked individuals across a major portion of the extant range. Our project is a unique opportunity to study comparative space use of prairie chickens, and we employed standardized methods that facilitated direct comparisons across an ecological gradient of study sites. Median home range size of females varied ~10-fold across 10 sites (3.6–36.7 km 2 ), and home ranges tended to be larger at sites with higher annual precipitation. Proximity to lek sites was a strong and consistent predictor of space use for female prairie chickens at all 10 sites. The relative importance of other predictors of space use varied among sites, indicating that generalized habitat management guidelines may not be appropriate for these two species. Prairie chickens actively selected for prairie habitats, even at sites where ~90% of the land cover within the study area was prairie. A majority of the females monitored in our study (>95%) had activity centers within 5 km of leks, suggesting that conservation efforts can be effectively concentrated near active lek sites. Our data on female space use suggest that lek surveys of male prairie chickens can indirectly assess habitat suitability for females during the breeding season. Lek monitoring and surveys for new leks provide information on population trends, but can also guide management actions aimed at improving nesting and brood-rearing habitats.

Ecosphere↗
USGS2018

Multi-year data from satellite- and ground-based sensors show details and scale matter in assessing climate’s effects on wetland surface water, amphibians, and landscape conditions

Long-term, interdisciplinary studies of relations between climate and ecological conditions on wetland-upland landscapes have been lacking, especially studies integrated across scales meaningful for adaptive resource management. We collected data in situ at individual wetlands, and via satellite for surrounding 4-km 2 landscape blocks, to assess relations between annual weather dynamics, snow duration, phenology, wetland surface-water availability, amphibian presence and calling activity, greenness, and evapotranspiration in four U.S. conservation areas from 2008 to 2012. Amid recent decades of relatively warm growing seasons, 2012 and 2010 were the first and second warmest seasons, respectively, dating back to 1895. Accordingly, we observed the earliest starts of springtime biological activity during those two years. In all years, early-season amphibians first called soon after daily mean air temperatures were ≥ 0°C and snow had mostly melted. Similarly, satellite-based indicators suggested seasonal leaf-out happened soon after snowmelt and temperature thresholds for plant growth had occurred. Daily fluctuations in weather and water levels were related to amphibian calling activity, including decoupling the timing of the onset of calling at the start of season from the onset of calling events later in the season. Within-season variation in temperature and precipitation also was related to vegetation greenness and evapotranspiration, but more at monthly and seasonal scales. Wetland water levels were moderately to strongly associated with precipitation and early or intermittent wetland drying likely reduced amphibian reproduction success in some years, even though Pseudacris crucifer occupied sites at consistently high levels. Notably, satellite-based indicators of landscape water availability did not suggest such consequential, intra-seasonal variability in wetland surface-water availability. Our cross-disciplinary data show how temperature and precipitation interacted to affect key ecological relations and outcomes on our study landscapes. These results demonstrate the value of multi-year studies and the importance of scale for understanding actual climate-related effects in these areas.

Minnesota, Wisconsin↗
USGS2025

Using angler-submitted records to interpret the spatial seasonality of a large predator (Black bass, Micropterus spp.)

In addition to having cultural, social, and economic significance, large predatory fish affect aquatic communities from the top down and serve as markers of ecosystem health. A focus on large predators is critical for managing ecosystems, conserving species, and guaranteeing the sustainability of aquatic resources. Recreational fishing is inherently biased towards large fish, and anglers possess the strength in numbers and geographical dispersion that enable them to sample the upper tiers of size distributions rarely encountered in standard fish surveys. We sought to further understand the ecological requirements and spatial seasonality of exceptionally sized black bass ( Micropterus spp.) via angler catches. Black bass > 3.6 kg were examined across 147 reservoirs in Texas, USA, with 2817 fish recorded by anglers into an online database in 2018–2024. Most fish were caught in late-winter and early-spring in line with spawning activities that included movements in-and-out of shallow water, nest building, and nest defense. Approximately 54 % of fish were caught with bottom-oriented fishing lures and techniques, and 40 % midwater; surface catches were less common. The efficacy of angling techniques varied seasonally. Those effective in winter were midwater, while those effective in summer were bottom or surface. Conversely, a combination of bottom and midwater techniques were effective in the fall and spring, suggesting cyclic habitat transitions. Moreover, the frequency with which fish were caught over various macrohabitats varied seasonally and cyclically. Our findings have the potential to inform habitat management that supports large predators and their migratory relocations. Our findings also underscore the value of using anglers and technology as sources of difficult-to-obtain fish and environmental data that may evade regular monitoring.

Texas↗
USGS2015

Genetic signatures of historical dispersal of fish threatened by biological invasions: the case of galaxiids in South America

Aim The ecological effects of biological invasions are well documented, but little is known about the effects of invaders on the genetic structure of native species. We examined the phylogeography, genetic variation and population structuring of two galaxiid fishes, Aplochiton zebra and A. taeniatus , threatened by non-native salmonids, and whose conservation is complicated by misidentification and limited knowledge of their genetic diversity. Location Chile and the Falkland Islands. Methods We combined microsatellite and mitochondrial DNA (16S rDNA and COI) markers to compare genetic diversity, effective population size and gene flow of Aplochiton spp. populations differentially affected by salmonid presence. Results We identified two 16S rDNA haplotypes among A. zebra &ndash; one dominant in coastal populations and another dominant in inland populations. Populations living on the island of Chilo&eacute; displayed a mixture of coastal and inland haplotypes, as well as high microsatellite diversity, as one would expect if the island had been a refugium during the Last Glacial Maximum, or a contact zone among populations. Microsatellite data revealed strong population structuring, indicative of current isolation patterns, and a negative correlation between the genetic diversity of A. zebra and the relative abundance of invasive salmonids. Main conclusions Our study indicates that population structuring of A. zebra reflects the influence of historical patterns of migration, but also the current levels of reduced gene flow among watersheds. Invasive salmonids, known to compete with and prey on native galaxiids, may have had negative impacts on the genetic diversity of Aplochiton spp. The low genetic variation found in some populations, coupled with potential biases in abundance estimates due to species misidentification, highlight the urgent need for more research into the conservation status of the two species of Aplochiton .

Journal of Biogeography↗
USGS2020

Supporting the development and use of native plant materials for restoration on the Colorado Plateau (Fiscal Year 19 Report)

A primary focus of the Bureau of Land Management’s (BLM’s) Colorado Plateau Native Plant Program (CPNPP) is to identify and develop appropriate native plant materials (NPMs) for current and future restoration projects. Multiple efforts have characterized the myriad challenges inherent in providing appropriate seed resources to enable effective, widespread restoration and have identified a broad suite of research activities to provide the information necessary to overcome those challenges (e.g., Plant Conservation Alliance 2015; Breed et al. 2018; Winkler et al. 2018). Many of the most complex information needs relate to identifying the appropriate sources of plant species that can successfully establish in dryland environments, like the Colorado Plateau, where low and highly variable precipitation is standard. Providing this information requires synergistic research efforts in which results from earlier investigations inform the design of subsequent investigations. The U.S. Geological Survey Southwest Biological Science Center’s (SBSC’s) research activities in FY19 followed an FY19 Statement of Work to support a research framework that is continually adapting based on the needs of the restoration community and results from previous investigations; the long-term research framework is outlined in the 2019-2023 5-Year Research Strategy (hereafter referred to as the 5-year plan). This research framework provides support for the National Seed Strategy for Rehabilitation and Restoration (Plant Conservation Alliance, 2015), Department of Interior Secretarial Order #3347 (Conservation Stewardship and Outdoor Recreation), and Department of Interior Leadership Priority #1 (Create a conservation stewardship legacy second only to Teddy Roosevelt). Research activities in FY19 centered on landscape genetics, collecting seeds in preparation for experimental common gardens, and planning and trials in support of experimental drought gardens. These activities were supported by three biological technicians, one of which was jointly funded by the Ecological Society of America for six pay periods. Most of the field-related activities, including plant trait measurement, seed/tissue collecting, and GRID (Germination for Restoration Information and Decision-making) experimental treatments at the Canyonlands Research Center near Moab, UT were assigned to these technicians. Contrary to the drought conditions the pervaded the Colorado Plateau in FY18, plentiful spring precipitation resulted in easily-collected plant tissue and seed collections. However, the cool and wet spring delayed the phenology of early blooming species, which caused difficulties for timing seed collecting. Furthermore, seed collecting for late blooming species was difficult because of lower than average monsoon precipitation. While Dr. Rob Massatti was the only scientist supported by the SBSC-CPNPP agreement in FY19, other scientists, including Drs. John Bradford, Seth Munson, Mike Duniway, Sasha Reed, and Daniel Winkler, spent a considerable amount of time providing expert guidance and support for individual projects. Work activities performed in support of each 5-year plan goal are discussed in turn.

Arizona, Colorado, New Mexico, Utah↗
USGS2025

A framework for guiding management decisions for amphibians in an uncertain future

Managing species in a rapidly changing climate requires knowledge of how species will respond to climate change and other threats while simultaneously developing management actions to reduce threats. Amphibians are one of the most threatened taxa on earth and often serve as the ‘canary in the coalmine’ for the health of ecosystems that countless other species and humans rely on. To understand the status of and guide management for the boreal toad (Anaxyrus boreas boreas), an imperiled amphibian species in the North Central region, we coproduced several products with the Boreal Toad Conservation Team. These products included 1) reconstructed seasonal hydrology patterns for historical boreal toad breeding wetlands and high elevation watersheds in the Southern Rocky Mountain Region (SRMR) from remotely sensed data, 2) current and future predictions of drying rates for historical breeding wetlands, 3) current and future predictions on the status of the boreal toad in the SRMR, and 4) a web tool to guide management actions. While the boreal toad is considered a ‘data rich’ species given data collection efforts that span multiple decades, many amphibian species are considered ‘data poor’, meaning managers lack data on the biology, ecology, or status of the species needed to make sound decisions. To address this knowledge gap, we also quantified drying patterns across watersheds for two ‘data poor’ species in the North Central region at risk from climate change: the Great Basin spadefoot toad ( Spea intermontana ) and the wood frog ( Lithobates sylvaticus ). These new data can guide management decisions for these species by allowing managers to understand habitat changes with respect to water availability, a crucial element for amphibian survival and persistence. Together, these products demonstrate how cutting-edge technology and analytical methods can produce a range of useful information to support amphibian conservation.

Colorado, New Mexico, Wyoming↗
USGS2019

Operationalizing resilience and resistance concepts to address invasive grass-fire cycles

Plant invasions can affect fuel characteristics, fire behavior, and fire regimes resulting in invasive plant-fire cycles and alternative, self-perpetuating states that can be difficult, if not impossible, to reverse. Concepts related to general resilience to disturbance and resistance to invasive plants provide the basis for managing landscapes to increase their capacity to reorganize and adjust following fire, while concepts related to spatial resilience provide the basis for managing landscapes to conserve resources and habitats and maintain connectivity. New, spatially explicit approaches and decision-tools enable managers to understand and evaluate general and spatial resilience to fire and resistance to invasive grasses across large landscapes in arid and semi-arid shrublands and woodlands. These approaches and tools provide the capacity to locate management actions strategically to prevent development of invasive grass-fire cycles and maintain or improve resources and habitats. In this review, we discuss the factors that influence fire regimes, general and spatial resilience to fire, resistance to invasive annual grasses, and thus invasive grass-fire cycles in global arid and semi-arid shrublands and woodlands. The Cold Deserts, Mediterranean Ecoregion, and Warm Deserts of North America are used as model systems to describe how and why resilience to disturbance and resistance to invasive annuals differ over large landscapes. The Cold Deserts are used to illustrate an approach and decision tools for prioritizing areas on the landscape for management actions to prevent development of invasive grass-fire cycles and protect high value resources and habitats and for determining effective management strategies. The concepts and approach herein represent a paradigm shift in the management of these ecosystems, which allows managers to use geospatial tools to identify resilience to disturbance and resistance to invasive plants in order to target conservation and restoration actions where they will provide the greatest benefits.

Frontiers in Ecology and Evolution↗
USGS1989

Regional lists of plant species that occur in wetlands: data base user's guide

The Data Base List of Plant Species that Occur in Wetlands (LIST) currently contains records for 6,728 plant species. Each record provides information on nomenclature, plant characteristics and lifeforms, distribution, and frequency of occurrence in wetlands. The List of Plant Species that Occur in Wetlands, developed to supplement the U.S. Fish and Wildlife Service's Classification of Wetlands and Deepwater Habitats of the United States (Cowardin et al. 1979), underwent an intensive review by field botanists across the country. This review was coordinated by national and regional interagency wetland plant list review panels composed of representatives from the U. S. Fish and Wildlife Service, U. S. Army Corps of Engineers, Soil Conservation Service, and the Environmental Protection Agency. Initial and updated versions of the Data Base List of Plant Species that Occur in Wetlands are available in hardcopy (Reed 1986, 1988). Regional lists are available as U.S. Fish and Wildlife Service Biological Report Series 88(26.126.13). State lists are available as National Ecology Research Center Report Series 88(18.01-18.50). The computerized data base tracks and documents indicator assignments made by regional interagency review panels and facilitates generation of reports. This user's guide describes the format and contents of the LIST Data Base. The Data Base is available on 5-1/4" floppy disks in ASCII format for use with a data base management system on an IBM PC/XT/AT compatible computer. The LIST Data Base was developed using the QUICKTEXT Data Base Management System (Osborn and Strong 1984). Use of QUICKTEXT with the LIST Data Base is strongly recommended. Instructions for loading LIST into QUICKTEXT are included in this user's guide. Other data base management systems capable of handling variable length fields can be used by individuals familiar with these software packages. LIST distribution disks are available for 13 regions (Table 1). QUICKTEXT (course QT100--Data Base Management Techniques) and regional subsets of the LIST Data Base (distributed as self-tutorial courses, Table 1) are available through the Office of Conference Services, Colorado State University.

Report↗
USGS2011

Microbial consortia of gorgonian corals from the Aleutian islands

Gorgonians make up the majority of corals in the Aleutian archipelago and provide critical fish habitat in areas of economically important fisheries. The microbial ecology of the deep-sea gorgonian corals Paragorgea arborea, Plumarella superba , and Cryogorgia koolsae was examined with culture-based and 16S rRNA gene-based techniques. Six coral colonies (two per species) were collected. Samples from all corals were cultured, and clone libraries were constructed from P. superba and C. koolsae . Cultured bacteria were dominated by the Gammaproteobacteria , especially Vibrionaceae , with other phyla comprising <6% of the isolates. The clone libraries showed dramatically different bacterial communities between corals of the same species collected at different sites, with no clear pattern of conserved bacterial consortia. Two of the clone libraries (one from each coral species) were dominated by Tenericutes , with Alphaproteobacteria dominating the remaining sequences. The other libraries were more diverse and had a more even distribution of bacterial phyla, showing more similarity between genera than within coral species. Here we report the first microbiological characterization of P. arborea, P. superba , and C. koolsae .

Alaska↗
USGS2005

Evaluation of ecological risk to populations of a threatened plant from an invasive biocontrol insect

Controversy exists over estimation of ecological risk in biological control. At present, the risk to the rare, federally listed Pitcher's thistle ( Cirsium pitcheri ) in North America from Rhinocyllus conicus , a biological control weevil now feeding on many native thistles, is unknown. We hypothesized that quantification of host specificity and potential phenological overlap between insect and plant would improve assessment of the magnitude of risk. In laboratory host specificity tests, we found no significant difference in R. conicus feeding or oviposition preference between the rare C. pitcheri and the targeted exotic weed ( Carduus nutans ) or between C. pitcheri and Platte thistle ( C. canescens ), a closely related native North American species known to be affected by R. conicus . In a garden environment, R. conicus spontaneously found, oviposited, and developed completely on C. pitcheri . Taller plants with more flower heads were significantly more vulnerable, suggesting that the greatest impact is likely to be on individuals that generally contribute the most to recruitment and population persistence. For eight sites in two national parks over three years, the calculated period of expected R. conicus activity overlapped 99% and 78% of the flower heads initiated by C. pitcheri in the southern and the northern park, respectively. A demographic model suggests that population growth rate (λ) of C. pitcheri will decrease from 0.9897 to 0.8686, while time to halve the population will decrease from 66.9 to 4.9 years, under the conservative assumption that oviposition by R. conicus on C. pitcheri will occur at the same rate as on the related C. canescens . Calculated decreases in λ and t 0.5 are larger if the rate of oviposition actually observed in the laboratory tests is used. These results indicate that the weevil poses a serious quantitative, demographic risk to the threatened C. pitcheri . The study supports the suggestion that ecological data can be used to improve the quantification of risk to native nontarget plant populations within the potential physiological host range of a biological control insect.

Ecological Applications↗