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At least 1,711 records · Page 95Linked to original sources
USGS2003

Measurement of fecal glucocorticoids in parrotfishes to assess stress

Coral reefs are in decline worldwide from a combination of natural and human forces. The environmental compromises faced by coral reef habitats and their associated fishes are potentially stressful, and in this study we examined the potential for assessing stress levels in coral reef fish. We determined the feasibility of using fecal casts from parrotfishes for remote assessment of stress-related hormones (cortisol and corticosterone), and the response of these hormones to the stress of restraint and hypoxia. Measurement of these hormones in fecal extracts by high performance liquid chromatography (HPLC) was validated using mass spectrometry, chemical derivitization, and radioactive tracer methods. In aquarium-adapted parrotfish, baseline levels of cortisol and corticosterone averaged 3.4??1.1 and 14.8??2.8ng/g feces, respectively, across 32 days. During 13 days of periodic stress these hormones, respectively, average 10.8-fold and 3.2-fold greater than baseline, with a return to near baseline during a 23-day follow-up. Testosterone was also measured as a reference hormone which is not part of the stress-response axis. Levels of this hormone were similar across the study. These fecal hormones were also measured in a field study of parrotfish in 10 fringing coral reef areas around the Caribbean Island of St. John, US Virgin Islands. Extracts of remotely collected fecal casts of three parrotfish species revealed no difference in respective average hormone levels among these species. Also, there was no difference in respective hormone levels between aquarium and field environments. However, levels of both cortisol and corticosterone, but not testosterone, were elevated in two of the 10 reef sites surveyed. This study demonstrates that parrotfish fecals can be collected in aquarium and field conditions and that steroid hormones in these fecals can be extracted and reliably measured. The study also demonstrates that cortisol and corticosterone in parrotfish fecals can be used as an indicator of the stress-response which is unlikely to be masked by intrinsic variability in the sample source, environment or methodology. ?? 2003 Elsevier Science (USA). All rights reserved.

General and Comparative Endocrinology↗
USGS2001

Differential rates of feldspar weathering in granitic regoliths

Differential rates of plagioclase and K-feldspar weathering commonly observed in bedrock and soil environments are examined in terms of chemical kinetic and solubility controls and hydrologic permeability. For the Panola regolith, in the Georgia Piedmont Province of southeastern United States, petrographic observations, coupled with elemental balances and 87Sr/86Sr ratios, indicate that plagioclase is being converted to kaolinite at depths > 6 m in the granitic bedrock. K-feldspar remains pristine in the bedrock but subsequently weathers to kaolinite at the overlying saprolite. In contrast, both plagioclase and K-feldspar remain stable in granitic bedrocks elsewhere in Piedmont Province, such as Davis Run, Virginia, where feldspars weather concurrently in an overlying thick saprolite sequence. Kinetic rate constants, mineral surface areas, and secondary hydraulic conductivities are fitted to feldspar losses with depth in the Panola and Davis Run regoliths using a time-depth computer spreadsheet model. The primary hydraulic conductivities, describing the rates of meteoric water penetration into the pristine granites, are assumed to be equal to the propagation rates of weathering fronts, which, based on cosmogenic isotope dating, are 7 m/106 yr for the Panola regolith and 4 m/106 yr for the Davis Run regolith. Best fits in the calculations indicate that the kinetic rate constants for plagioclase in both regoliths are factors of two to three times faster than K-feldspar, which is in agreement with experimental findings. However, the range for plagioclase and K-feldspar rates (kr = 1.5 x 10-17 to 2.8 x 10-16 mol m-2 s-1) is three to four orders of magnitude lower than for that for experimental feldspar dissolution rates and are among the slowest yet recorded for natural feldspar weathering. Such slow rates are attributed to the relatively old geomorphic ages of the Panola and Davis Run regoliths, implying that mineral surface reactivity decreases significantly with time. Differential feldspar weathering in the low-permeability Panola bedrock environment is more dependent on relative feldspar solubilities than on differences in kinetic reaction rates. Such weathering is very sensitive to primary and secondary hydraulic conductivities (qp and qs), which control both the fluid volumes passing through the regolith and the thermodynamic saturation of the feldspars. Bedrock permeability is primarily intragranular and is created by internal weathering of networks of interconnected plagioclase phenocrysts. Saprolite permeability is principally intergranular and is the result of dissolution of silicate phases during isovolumetric weathering. A secondary to primary hydraulic conductivity ratio of qs/qp = 150 in the Panola bedrock results in kinetically controlled plagioclase dissolution but thermodynamically inhibited K-feldspar reaction. This result is in accord with calculated chemical saturation states for groundwater sampled in the Panola Granite. In contrast, greater secondary conductivities in the Davis Run saprolite, qs/qp = 800, produces both kinetically controlled plagioclase and K-feldspar dissolution. Faster plagioclase reaction, leading to bedrock weathering in the Panola Granite but not at Davis Run, is attributed to a higher anorthite component of the plagioclase and a wetter and warmer climate. In addition, the Panola Granite has an abnormally high content of disseminated calcite, the dissolution of which precedes the plagioclase weathering front, thus creating additional secondary permeability. Copyright ?? 2001 Elsevier Science Ltd.

Geochimica et Cosmochimica Acta↗
USGS1998

Chemical weathering in a tropical watershed, Luquillo Mountains, Puerto Rico: II. Rate and mechanism of biotite weathering

Samples of soil, saprolite, bedrock, and porewater from a lower montane wet forest, the Luquillo Experimental Forest (LEF) in Puerto Rico, were studied to investigate the rates and mechanisms of biotite weathering. The soil profile, at the top of a ridge in the Rio Icacos watershed, consists of a 50–100-cm thick layer of unstructured soil above a 600–800 cm thick saprolite developed on quartz diorite. The only minerals present in significant concentration within the soil and saprolite are biotite, quartz, kaolinite, and iron oxides. Biotite is the only primary silicate releasing significant K and Mg to porewaters. Although biotite in samples of the quartz diorite bedrock is extensively chloritized, chlorite is almost entirely absent in the saprolite phyllosilicates. Phyllosilicate grains are present as 200–1000 μm wide books below about 50 cm depth. X-ray diffraction (XRD) and electron microprobe analyses indicate that the phyllosilicate grains contain a core of biotite surrounded by variable amounts of kaolinite. Lattice fringe images under transmission electron microscope (TEM) show single layers of biotite altering to two layers of kaolinite, suggesting dissolution of biotite and precipitation of kaolinite at discrete boundaries. Some single 14-Å layers are also observed in the biotite under TEM. The degree of kaolinitization of individual phyllosilicate grains as observed by TEM decreases with depth in the saprolite. This TEM work is the first such microstructural evidence of epitaxial growth of kaolinite onto biotite during alteration in low-temperature environments. The rate of release of Mg in the profile, calculated as a flux through the soil normalized per watershed land area, is approximately 500 mol hectare −1 yr −1 (1.6 × 10 −9 mol Mg m soil −2 s −1 ). This rate is similar to the flux estimated from Mg discharge out the Rio Icacos (1000 mol hectare −1 yr −1 , or 3.5 × 10 −9 mol Mg m soil −2 s −1 ), indicating that scaling up from the soil to the watershed is possible for Mg release. The rate of Mg release from biotite, normalized to Brunauer-Emmett-Teller (BET) surface area, is calculated using a mass balance equation which includes the density and volume of phyllosilicate grains, porewater chemistry and flux, and soil porosity. The mean rates of biotite weathering calculated from K and Mg release rates are approximately 6 and 11 × 10 −16 mol biotite m biotite −2 s −1 respectively, significantly slower than laboratory rates (10 −12 to 10 −11 mol biotite m biotite −2 s −1 ). The discrepancy in scaling down from the soil to the laboratory is probably explained by (1) differences in weathering mechanism between the two environments, (2) higher solute concentrations in soil porewaters, (3) loss of reactive surface area of biotite in the saprolite due to kaolinite and iron oxide coatings, and/or (4) unaccounted-for heterogeneities in flow path through the soil.

El Yunque, Luquillo Experimental Forest, Luquillo ↗
USGS2001

Ocean Drilling Program Leg 178 (Antarctic Peninsula): Sedimentology of glacially influenced continental margin topsets and foresets

Ocean Drilling Program Leg 178 (February-April 1998) drilled two sites (Sites 1097 and 1103) on the outer Antarctic Peninsula Pacific continental shelf. Recovered strata are no older than late Miocene or early Pliocene (<4.6 Ma). Recovery at shallow depths in loosely consolidated and iceberg-turbated bouldery sediment was poor but improved with increasing depth and consolidation to allow description of lithofacies and biofacies and interpretation of depositional environment. Site 1097 lies on the outer shelf within Marguerite Trough which is a major outlet for ice expanding seaward from the Antarctic Peninsula and reached a maximum depth drilled of 436.6 m below the sea floor (mbsf). Seismic stratigraphic data show flat-lying upper strata resting on strata that dip gently seaward. Uppermost strata, to a depth of 150 mbsf, were poorly recovered, but data suggest they consist of diamictites containing reworked and abraded marine microfauna. This interval is interpreted as having been deposited largely as till produced by subglacial cannibalization of marine sediments (deformation till) recording ice sheet expansion across the shelf. Underlying gently dipping strata show massive, stratified and graded diamictite facies with common bioturbation and slump stuctures that are interbedded with laminated and massive mudstones with dropstones. The succession contains a well-preserved in situ marine microfauna typical of open marine and proglacial marine environments. The lower gently dipping succession at Site 1097 is interpreted as a complex of sediment gravity flows formed of poorly sorted glacial debris. Site 1103 was drilled in that part of the continental margin that shows uppermost flat-lying continental shelf topsets overlying steeper dipping slope foresets seaward of a structural mid-shelf high. Drilling reached a depth of 363 mbsf with good recovery in steeply dipping continental slope foreset strata. Foreset strata are dominated by massive and chaotically stratified diamictites interbedded with massive and graded sandstones and mudstones. The sedimentary record and seismic stratigraphy is consistent with deposition on a continental slope from debris flows and turbidity currents released from a glacial source. Data from Sites 1097 and 1103 suggest the importance of aggradation of the Antarctic Peninsula continental shelf by tilt deposition and progradation of the slope by mass flow. This may provide a model for the interpretation of Palaeozoic and Proterozoic glacial successions that accumulated on glacially influenced continental margins.

Marine Geology↗
USGS2002

Suspended sediment transport on the continental shelf near Davenport, California

Suspended sediment transport on the shelves off Santa Cruz and Davenport, California is studied using field measurements and bottom boundary layer modeling. Strong transport events mostly occur during storms in winter; the volume of winter sediment transport is at least one order of magnitude greater than that of summer/spring transport. Rock outcrops on the inner shelf (< 40 m of water) indicates an erosional environment, but an elongated mid-shelf mud deposit evidently suggests a depositional environment on the mid-shelf. The seafloor geology appears to correlate to the poleward and offshore sediment transport pattern. This study also suggests that suspended sediment moves out of Monterey Bay, roughly along the isobaths of the northern bay. This fine material, originally from river sources, and the material from the coastal cliff erosion that is subsequently introduced to the transport system through cross-shelf sediment transport, are believed to be the sources of the mid-shelf mud deposit. ?? 2002 Elsevier Science B.V. All rights reserved.

Marine Geology↗
USGS2002

Flow and sediment suspension events on the inner shelf of central California

The US Geological Survey conducted a field experiment in the late spring and early summer of 1998 off northern Santa Cruz County, California, to study sediment fluxes along the central California shelf. As part of this study, a bottom-mounted instrument package was deployed in a sediment-filled paleo-stream channel (h=12 m) off a pocket beach to measure waves, currents, suspended-sediment concentration, temperature, salinity, and seabed-level changes. The observations of suspended-sediment concentration revealed intermittent, intense periods of sediment suspension near the bed that were associated with the passage of individual large waves or wave groups. We used an ensemble averaging technique to characterize the temporal structure of near-bed sediment suspension events (SSEs) defined as when the near-bed instantaneous concentration exceeded the mean by three standard deviations. During the 800 h of deployment, over 9500 SSEs occurred. The 3917 SSEs that began under onshore flow were found to have a different temporal structure than the 5650 events that began during offshore flow. The longer mean duration of the onshore flow events caused an average of 83% of the sediment suspended during the course of the events to be carried offshore after the reversal of flow. All of the sediment suspended during the offshore events was carried offshore due to the shorter mean duration of these events. SSEs are shown to contribute 12% on average and up to 95% of the total sediment suspended by mass, demonstrating the importance of these events to sediment transport in this type of environment. Suspended-sediment transport models developed for the shelf, which use the product of the mean current and the mean suspended-sediment concentration, cannot accurately model the magnitude and direction of suspended-sediment transport on this energetic inner shelf due to the lack of information regarding the instantaneous coupling between fluid flow and sediment suspension. We conclude that time-variant models must be used to accurately model suspended-sediment transport in this type of environment.

California↗
USGS2002

Continental shelf GIS for the Monterey Bay National Marine Sanctuary

A marine sanctuary is an environment where the interests of science and society meet. Land and marine managers need access to the best scientific data available that describe the environment and environmental processes in sanctuaries. The sidescan sonar imagery, bathymetry, sample analyses and other data discussed in the papers in this volume have been made available as a U.S. Geological Survey CDROM publication. ?? 2002 Elsevier Science B.V. All rights reserved.

Marine Geology↗
USGS2003

Sediment-starved sand ridges on a mixed carbonate/siliciclastic inner shelf off west-central Florida

High-resolution side-scan mosaics, sediment analyses, and physical process data have revealed that the mixed carbonate/siliciclastic, inner shelf of west-central Florida supports a highly complex field of active sand ridges mantled by a hierarchy of bedforms. The sand ridges, mostly oriented obliquely to the shoreline trend, extend from 2 km to over 25 km offshore. They show many similarities to their well-known counterparts situated along the US Atlantic margin in that both increase in relief with increasing water depth, both are oriented obliquely to the coast, and both respond to modern shelf dynamics. There are significant differences in that the sand ridges on the west-central Florida shelf are smaller in all dimensions, have a relatively high carbonate content, and are separated by exposed rock surfaces. They are also shoreface-detached and are sediment-starved, thus stunting their development. Morphological details are highly distinctive and apparent in side-scan imagery due to the high acoustic contrast. The seafloor is active and not a relict system as indicated by: (1) relatively young AMS 14C dates (< 1600 yr BP) from forams in the shallow subsurface (1.6 meters below seafloor), (2) apparent shifts in sharply distinctive grayscale boundaries seen in time-series side-scan mosaics, (3) maintenance of these sharp acoustic boundaries and development of small bedforms in an area of constant and extensive bioturbation, (4) sediment textural asymmetry indicative of selective transport across bedform topography, (5) morphological asymmetry of sand ridges and 2D dunes, and (6) current-meter data indicating that the critical threshold velocity for sediment transport is frequently exceeded. Although larger sand ridges are found along other portions of the west-central Florida inner shelf, these smaller sand ridges are best developed seaward of a major coastal headland, suggesting some genetic relationship. The headland may focus and accelerate the N-S reversing currents. An elevated rock terrace extending from the headland supports these ridges in a shallower water environment than the surrounding shelf, allowing them to be more easily influenced by currents and surface gravity waves. Tidal currents, storm-generated flows, and seasonally developed flows are shore-parallel and oriented obliquely to the NW-SE trending ridges, indicating that they have developed as described by the Huthnance model. Although inner shelf sand ridges have been extensively examined elsewhere, this study is the first to describe them in a low-energy, sediment-starved, dominantly mixed siliciclastic/carbonate sedimentary environment situated on a former limestone platform. ?? 2003 Elsevier B.V. All rights reserved.

Florida↗
USGS1997

Biogeochemical phosphorus mass balance for Lake Baikal, southeastern Siberia, Russia

Extensive data for Lake Baikal have been synthesized into a geochemical mass balance for phosphorus (P). Some of the P budget and internal cycling terms for Baikal have been compared to similar terms for oligotrophic Lake Superior, mesotrophic Lake Michigan and the Baltic Sea, and the Ocean. Lake Baikal has a large external source of fluvial P compared to the Laurentian upper Great Lakes and the Ocean. The major tributary to Lake Baikal has experienced substantial increases in organic P loading during the past 25 years. This, coupled with potential P inputs from possible phosphorite mining, may threaten Baikal's oligotrophic status in the future. Water-column remineralization of particulate organic P is substantially greater in Lake Baikal than in the Laurentian Great Lakes. This is probably due to the great water depths of Lake Baikal. There is a gradient in P burial efficiency, with very high values (80%) for Lake Baikal and Lake Superior, lower values (50%) for Lake Michigan and the Baltic Sea, and a low value (13%) for the Ocean. The accumulation rate of P in Lake Baikal sediments is somewhat greater than that in the Laurentian upper Great Lakes and the Baltic Sea, and much greater than in the Ocean. Benthic regeneration rates are surprisingly similar for large lacustrine and marine environments and supply less than 10% of the P utilized for primary production in these aquatic environments.

Marine Geology↗
USGS1997

Evaluation of conditions along the grounding line of temperate marine glaciers: An example from Muir Inlet, Glacier Bay, Alaska

In the marine environment, stability of the glacier terminus and the location of subglacial streams are the dominant controls on the distribution of grounding-line deposits within morainal banks. A morainal bank complex in Muir Inlet, Glacier Bay, SE Alaska, is used to develop a model of terminus stability and location of subglacial streams along the grounding line of temperate marine glaciers. This model can be used to interpret former grounding-line conditions in other glacimarine settings from the facies architecture within morainal bank deposits. The Muir Inlet morainal bank complex was deposited between 1860 A.D. and 1899 A.D., and historical observations provide a record of terminus positions, glacial retreat rates and sedimentary sources. These data are used to reconstruct the depositional environment and to develop a correlation between sedimentary facies and conditions along the grounding line. Four seismic facies identified on the high-resolution seismic-reflection profiles are used to interpret sedimentary facies within the morainal bank complex. Terminus stability is interpreted from the distribution of sedimentary facies within three distinct submarine geomorphic features, a grounding-line fan; stratified ridges, and a field of push ridges. The grounding-line fan was deposited along a stable terminus and is represented on seismic-reflection profiles by two distinct seismic facies, a proximal and a distal fan facies. The proximal fan facies was deposited at the efflux of subglacial streams and indicates the location of former glacifluvial discharges into the sea. Stratified ridges formed as a result of the influence of a quasi-stable terminus on the distribution of sedimentary facies along the grounding line. A field of push ridges formed along the grounding line of an unstable terminus that completely reworked the grounding-line deposits through glacitectonic deformation. Between 1860 A.D. and 1899 A.D. (39 years), 8.96 x 108 m3 of sediment were deposited within the Muir Inlet morainal bank complex at an average annual sediment accumulation rate of 2.3 x 107 m3/a. This rate represents the annual sediment production capacity of the glacier when the Muir Inlet drainage basin is filled with glacial ice.

Marine Geology↗
USGS1999

An environmental tolerance index for ostracodes as indicators of physical and chemical factors in aquatic habitats

Continental ostracode occurrences reflect salinity, solute composition, temperature, flow conditions, and other environmental properties of the water they inhabit. Their occurrences also reflect the variability of many of these environmental parameters. Environmental tolerance indices (ETIs) offer a new way to express the nature of an ostracode's environment. As defined herein, ETIs range in value from zero to one, and may be calculated for continuous and binary variables. For continuous variables such as salinity, the ETI is the ratio of the range of values of salinity tolerated by an ostracode to the total range of salinity values from a representative database. In this investigation, the database of continuous variables consists of information from 341 sites located throughout the United States. Binary ETIs indicate whether an environmental variable such as flowing water affects ostracode presence or absence. The binary database consists of information from 784 sites primarily from Illinois, USA. ETIs were developed in this investigation to interpret paleohydrological changes implied by fossil ostracode successions. ETI profiles may be cast in terms of a weighted average, or on presence/absence. The profiles express ostracode tolerance of environmental parameters such as salinity or currents. Tolerance of a wide range of values is taken to indicate shallow water because shallow environments are conducive to thermal variability, short-term water residence, and the development of currents from wind-driven waves.

Conference Paper↗
USGS2000

Stratigraphic and climatic implications of clay mineral changes around the Paleocene/Eocene boundary of the northeastern US margin

Kaolinite usually is present in relatively small amounts in most upper Paleocene and lower Eocene neritic deposits of the northern US Atlantic Coastal Plain. However, there is a short period (less than 200,000 k.y.) in the latest Paleocene (upper part of calcareous nannoplankton Zone NP 9) when kaolinite-dominated clay mineral suites replaced the usual illite/smectite-dominated suites. During this time of global biotic and lithologic changes, kaolinite increased from less than 5% of the clay mineral suite to peak proportions of 50-60% of the suite and then returned to less than 5% in uppermost Paleocene/lowermost Eocene strata. This kaolinite pulse is present at numerous localities from southern Virginia to New Jersey. These sites represent both inner and middle neritic depositional environments and reflect input from several river drainage systems. Thus, it is inferred that kaolinite-rich source areas were widespread in the northeastern US during the latest Paleocene. Erosion of these source areas contributed the kaolinite that was transported and widely dispersed into shelf environments of the Salisbury embayment. The kaolinite increase, which occurred during a time of relatively high sea level, probably is the result of intensified weathering due to increased temperature and precipitation. The southern extent of the kaolinite pulse is uncertain in that uppermost Paleocene beds have not been identified in the southern Atlantic Coastal Plain. The late Paleocene kaolinite pulse that consists of an increase to peak kaolinite levels followed by a decrease can be used for detailed correlation between more upbasin and more downbasin sections in the Salisbury embayment. Correlations show that more upbasin Paleocene/Eocene boundary sections are erosionally truncated. They have varying portions of the kaolinite increase and, if present at all, discontinuous portions of the subsequent kaolinite decrease. As these truncated sections are disconformably overlain by lower Eocene strata, rapid erosional removal of large parts of the most kaolinite-rich P/E boundary clay deposits occurred by early Eocene time. Erosion of the kaolinite-rich P/E boundary beds was enhanced during times of sea-level fall when kaolinite-rich sediments were redeposited to produce kaolinite spikes in basal beds of lower and middle Eocene sequences that have little or no kaolinite elsewhere in the sequence. In contrast, more downbasin sites document only the upper, decreasing part of the kaolinite pulse. The absence of strata documenting the earlier kaolinite increase is attributed to slow sedimentation (condensed interval) as a result of a significant sea level rise that ponded most sediments in shallower waters, combined with the probable subsequent erosional removal of these thin downbasin deposits by oceanic currents.

Sedimentary Geology↗
USGS2003

Fin development in stream- and hatchery-reared Atlantic salmon

To determine the effect of development and environment on fin growth, we measured fin lengths of juvenile Atlantic salmon (Salmo salar) from two hatcheries (August, October and April-May), stream-reared fish (July and October) stocked as fry into two tributaries, and smelts from the main stem of the Connecticut River (May). For stream-reared parr, there was a linear relationship between the dorsal, caudal and anal fins with fork length, while the pectoral, pelvic and adipose fins exhibited a curvilinear relationship with fork length. Parr from a high gradient stream had larger caudal fins than fish from a low gradient stream, but other fins did not differ. Regression lines for the fins of stream-reared smelts were all linear when fin length was regressed against fork length. Stream-reared parr had larger pectoral, pelvic and anal fins than smolts of similar size while dorsal and caudal fin lengths did not differ. Regression equations formulated using the fins of stream-reared parr were used to calculate the percent difference (100 x observed fin length/expected) in fin lengths between stream- and hatchery-reared parr. The pelvic, adipose, caudal and anal fins of hatchery-reared parr showed no signs of degeneration by the first sampling period 7 months after hatching, whereas degeneration in the pectoral (13-20%) and dorsal (15-18%) fins was evident at this time. By the end of the study, degeneration was present in every fin except the adipose, with the pectoral (35-65%) and dorsal (32-58%) fins exhibiting the greatest amount of fin loss. All fins of hatchery-reared parr became shorter with time. There were minor differences in fin degeneration among parr from the two hatcheries, but the overall pattern of decreasing fin size was similar, indicating a common cause of fin degeneration. Comparison of stream- and hatchery-reared fish is a valuable means of determining the impact of captive environments on fin growth.

Aquaculture↗
USGS2003

Modeling Np and Pu transport with a surface complexation model and spatially variant sorption capacities: Implications for reactive transport modeling and performance assessments of nuclear waste disposal sites

One-dimensional (1D) geochemical transport modeling is used to demonstrate the effects of speciation and sorption reactions on the ground-water transport of Np and Pu, two redox-sensitive elements. Earlier 1D simulations (Reardon, 1981) considered the kinetically limited dissolution of calcite and its effect on ion-exchange reactions (involving 90 Sr, Ca, Na, Mg and K), and documented the spatial variation of a 90 Sr partition coefficient under both transient and steady-state chemical conditions. In contrast, the simulations presented here assume local equilibrium for all reactions, and consider sorption on constant potential, rather than constant charge, surfaces. Reardon's (1981) seminal findings on the spatial and temporal variability of partitioning (of 90 Sr) are reexamined and found partially caused by his assumption of a kinetically limited reaction. In the present work, sorption is assumed the predominant retardation process controlling Pu and Np transport, and is simulated using a diffuse-double-layer-surface-complexation (DDLSC) model. Transport simulations consider the infiltration of Np- and Pu-contaminated waters into an initially uncontaminated environment, followed by the cleanup of the resultant contamination with uncontaminated water. Simulations are conducted using different spatial distributions of sorption capacities (with the same total potential sorption capacity, but with different variances and spatial correlation structures). Results obtained differ markedly from those that would be obtained in transport simulations using constant K d , Langmuir or Freundlich sorption models. When possible, simulation results (breakthrough curves) are fitted to a constant K d advection–dispersion transport model and compared. Functional differences often are great enough that they prevent a meaningful fit of the simulation results with a constant K d (or even a Langmuir or Freundlich) model, even in the case of Np, a weakly sorbed radionuclide under the simulation conditions. Functional behaviors that cannot be fit include concentration trend reversals and radionuclide desorption spikes. Other simulation results are fit successfully but the fitted parameters ( K d and dispersivity) vary significantly depending on simulation conditions (e.g. “infiltration” vs. “cleanup” conditions). Notably, an increase in the variance of the specified sorption capacities results in a marked increase in the dispersion of the radionuclides. The results presented have implications for the simulation of radionuclide migration in performance assessments of nuclear waste-disposal sites, for the future monitoring of those sites, and more generally for modeling contaminant transport in ground-water environments.

Computers & Geosciences↗
USGS1999

Organic geochemistry in Pennsylvanian tidally influenced sediments from SW Indiana

Tidal rhythmites are vertically stacked small-scale sedimentary structures that record daily variations in tidal current energy and are known to overlie some low-sulfur coals in the Illinois Basin. Tidal rhythmites from the Pennsylvanian Brazil Formation in Indiana have been analyzed sedimentologically, petrographically, and geochemically in order to understand the character and distribution of organic matter (OM) preserved in an environment of daily interactions between marine and fresh waters. The concentration of organic matter (TOC) ranges from traces to 6.9% and sulfur rarely exceeds 0.1% in individual laminae. Angular vitrinite is the major organic matter type, accounting for 50-90% of total OM. The C/S ratio decreases as the verfical distance from the underlying coal increases. A decreasing C/S ratio coupled with decreases in Pr/Ph, Pr/n-C17, Ph/n-C18 ratios and a shift of carbon isotopic composition towards less negative values suggest an increase in salinity from freshwater in the mudflat tidal rhythmite facies close to the coal to brackish/marine in the sandflat tidal rhythmite facies further above from the coal. Within an interval spanning one year of deposition, TOC and S values show monthly variability. On a daily scale, TOC and S oscillations are still detectable but they are of lower magnitude than on a monthly scale. These small-scale variations are believed to reflect oscillations in water salinity related to tidal cycles.Tidal rhythmites are vertically stacked small-scale sedimentary structures that record daily variations in tidal current energy and are known to overlie some low-sulfur coals in the Illinois Basin. Tidal rhythmites from the Pennsylvanian Brazil Formation in Indiana have been analyzed sedimentologically, petrographically, and geochemically in order to understand the character and distribution of organic matter (OM) preserved in an environment of daily interactions between marine and fresh waters. The concentration of organic matter (TOC) ranges from traces to 6.9% and sulfur rarely exceeds 0.1% in individual laminae. Angular vitrinite is the major organic matter type, accounting for 50-90% of total OM. The C/S ratio decreases as the vertical distance from the underlying coal increases. A decreasing C/S ratio coupled with decreases in Pr/Ph, Pr/n-C17, Ph/n-C18 ratios and a shift of carbon isotopic composition towards less negative values suggest an increase in salinity from freshwater in the mudflat tidal rhythmite facies close to the coal to brackish/marine in the sandflat tidal rhythmite facies further above from the coal. Within an interval spanning one year of deposition, TOC and S values show monthly variability. On a daily scale, TOC and S oscillations are still detectable but they are of lower magnitude than on a monthly scale. These small-scale variations are believed to reflect oscillations in water salinity related to tidal cycles.

Organic Geochemistry↗
USGS1997

Organic geochemical study of sequences overlying coal seams; example from the Mansfield Formation (Lower Pennsylvanian), Indiana

Roof successions above two coal seams from the Mansfield Formation (Lower Pennsylvanian) in the Indiana portion of the Illinois Basin have been studied with regard to sedimentary structures, organic petrology and organic geochemistry. The succession above the Blue Creek Member of the Mansfield Formation is typical of the lithologies covering low-sulphur coals (< 1%) in the area studied, whereas the succession above the unnamed Mansfield coal is typical of high-sulphur coals (>2.%). The transgressive-regressive packages above both seams reflect the periodic inundation of coastal mires by tidal flats and creeks as inferred from bioturbation and sedimentary structures such as tidal rhythmites and clay-draped ripple bedforms. Geochemistry and petrology of organic facies above the Blue Creek coal suggest that tidal flats formed inland in fresh-water environments. These overlying fresh water sediments prevented saline waters from invading the peat, contributing to low-sulphur content in the coal. Above the unnamed coal, trace fossils and geochemical and petrological characteristics of organic facies suggest more unrestricted seaward depositional environment. The absence of saline or typically marine biomarkers above this coal is interpreted as evidence of very short periods of marine transgression, as there was not enough time for establishment of the precursor organisms for marine biomarkers. However, sufficient time passed to raise SO 4 2− concentration in pore waters, resulting in the formation of authigenic pyrite and sulphur incorparation into organic matter.

International Journal of Coal Geology↗
USGS2002

Ecological and evolutionary traps

Organisms often rely on environmental cues to make behavioral and life-history decisions. However, in environments that have been altered suddenly by humans, formerly reliable cues might no longer be associated with adaptive outcomes. In such cases, organisms can become 'trapped' by their evolutionary responses to the cues and experience reduced survival or reproduction. Ecological traps occur when organisms make poor habitat choices based on cues that correlated formerly with habitat quality. Ecological traps are part of a broader phenomenon, evolutionary traps, involving a dissociation between cues that organisms use to make any behavioral or life-history decision and outcomes normally associated with that decision. A trap can lead to extinction if a population falls below a critical size threshold before adaptation to the novel environment occurs. Conservation and management protocols must be designed in light of, rather than in spite of, the behavioral mechanisms and evolutionary history of populations and species to avoid 'trapping' them.

Trends in Ecology and Evolution↗
USGS2003

Flood plain and channel dynamics of the Quinault and Queets Rivers, Washington, USA

Comparison of historic channel migration rates, modern planform conditions, and overall sediment, wood, and flow conditions and interactions for the Quinault River and Queets River in the western Olympic Peninsula, Washington, reveals decadal- to century-scale interactions between gravel-bed channels and forested flood plains in temperate maritime environments. The downstream alluvial portions of these two rivers can be divided into three reaches of different slope, flow, sediment, and wood regimes: (i) the upper Quinault River is aggrading behind Lake Quinault, a natural lake that traps most sediment and wood transported from the Olympic Mountain headwaters. (ii) The lower Quinault River, downstream of Lake Quinault, transports only sediment and wood derived from reworking of flood-plain deposits and contributed from valley margins. (iii) The Queets River has unimpeded movement of sediment and water from the mountainous headwaters to the Pacific Ocean. Measurements of channel planform characteristics and historic migration rates and patterns show that these three reaches have correspondingly distinct channel and flood-plain morphologies and dynamics. The aggrading and sediment-rich upper Quinault River has the widest flood plain, widest active channel, greatest number of low-flow channels and flanking gravel bars, and an average channel migration rate of 12.7&plusmn;3.3 m/year between 1900 and 1994. The comparatively sediment-poor lower Quinault River has the narrowest flood plain, narrowest active channel, and lowest channel migration rate (4.0&plusmn;1.2 m/year); and most flow is through a single channel with few adjacent gravel bars. The Queets River has attributes intermediate between the lower and upper Quinault Rivers, including an average channel migration rate of 7.5&plusmn;2.9 m/year. Flood-plain turnover rates are similar for all three reaches, with channels eroding the flood plain at the rate of about 0.2% of the flood-plain area per year, and with corresponding flood-plain half-lives of 300 to 500 years. Observations from this study and previous studies on the Queets River show that channel and flood-plain dynamics and morphology are affected by interactions between flow, sediment, and standing and entrained wood, some of which likely involve time frames similar to 200&ndash;500-year flood-plain half-lives. On the upper Quinault River and Queets River, log jams promote bar growth and consequent channel shifting, short-distance avulsions, and meander cutoffs, resulting in mobile and wide active channels. On the lower Quinault River, large portions of the channel are stable and flow within vegetated flood plains. However, locally, channel-spanning log jams have caused channel avulsions within reaches that have been subsequently mobile for several decades. In all three reaches, log jams appear to be areas of conifer germination and growth that may later further influence channel and flood-plain conditions on long time scales by forming flood-plain areas resistant to channel migration and by providing key members of future log jams. Appreciation of these processes and dynamics and associated temporal and spatial scales is necessary to formulate effective long-term approaches to managing fluvial ecosystems in forested environments.

Geomorphology↗