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The Amphibian Research and Monitoring Initiative (ARMI): 5-year report

The Amphibian Research and Monitoring Initiative (ARMI) is an innovative, multidisciplinary program that began in 2000 in response to a congressional directive for the Department of the Interior to address the issue of amphibian declines in the United States. ARMI’s formulation was cross-disciplinary, integrating U.S. Geological Survey scientists from Biology, Water, and Geography to develop a course of action (Corn and others, 2005a). The result has been an effective program with diverse, yet complementary, expertise. ARMI’s approach to research and monitoring is multiscale. Detailed investigations focus on a few species at selected local sites throughout the country; monitoring addresses a larger number of species over broader areas (typically, National Parks and National Wildlife Refuges); and inventories to document species occurrence are conducted more extensively across the landscape. Where monitoring is conducted, the emphasis is on an ability to draw statistically defensible conclusions about the status of amphibians. To achieve this objective, ARMI has instituted a monitoring response variable that has nationwide applicability. At research sites, ARMI focuses on studying species/environment interactions, determining causes of observed declines, and developing new techniques to sample populations and analyze data. Results from activities at all scales are provided to scientists, land managers, and policymakers, as appropriate. The ARMI program and the scientists involved contribute significantly to understanding amphibian declines at local, regional, national, and international levels. Within National Parks and National Wildlife Refuges, findings help land managers make decisions applicable to amphibian conservation. For example, the National Park Service (NPS) selected amphibians as a vital sign for several of their monitoring networks, and ARMI scientists provide information and assistance in developing monitoring methods for this NPS effort. At the national level, ARMI has had major exposure at a variety of meetings, including a dedicated symposium at the 2004 joint meetings of the Herpetologists’ League, the American Society of Ichthyologists and Herpetologists, and the Society for the Study of Amphibians and Reptiles. Several principal investigators have brought international exposure to ARMI through venues such as the World Congress of Herpetology in South Africa in 2005 (invited presentation by Dr. Gary Fellers), the Global Amphibian Summit, sponsored by the International Union for Conservation of Nature (IUCN) and Wildlife Conservation International, in Washington, D.C., 2005 (invited participation by Dr. P.S. Corn), and a special issue of the international herpetological journal Alytes focused on ARMI in 2004 (edited by Dr. C.K. Dodd, Jr.). ARMI research and monitoring efforts have addressed at least 7 of the 21 Threatened and Endangered Species listed by the U.S. Fish and Wildlife Service (California red-legged frog [Rana draytonii], Chiricahua leopard frog [R. chiricahuensis], arroyo toad [Bufo californicus], dusky gopher frog [Rana sevosa], mountain yellow-legged frog [R. muscosa], flatwoods salamander [Ambystoma cingulatum], and the golden coqui [Eleutherodactylus jasperi]), and 9 additional species of concern recognized by the IUCN. ARMI investigations have addressed time-sensitive research, such as emerging infectious diseases and effects on amphibians related to natural disasters like wildfire, hurricanes, and debris flows, and the effects of more constant, environmental change, like urban expansion, road development, and the use of pesticides. Over the last 5 years, ARMI has partnered with an extensive list of government, academic, and private entities. These partnerships have been fruitful and have assisted ARMI in developing new field protocols and analytic tools, in using and refining emerging technologies to improve accuracy and efficiency of data handling, in conducting amphibian disease, malformation, and environmental effects research, and in implementing a network of monitoring and research sites. Accomplishments from these endeavors include more than 40 publications on amphibian status and trends, nearly 100 publications on amphibian ecology and causes of declines, and over 30 methodological publications. Several databases have emerged as a result of ARMI and its partnerships; one, a digital atlas of ranges for all U.S. amphibian species, was used by the IUCN to display amphibian distribution maps in the Global Amphibian Assessment Project. Given the scope of ARMI and the panoply of projects, findings have had implications for policy. Investigations that demonstrate amphibian declines or illuminate causes of declines provide valuable information about habitat management, environmental effects, mechanisms for the spread of disease, and human/amphibian interfaces. This information has been made available to land managers, scientists, educators, Congress and other policymakers, and the public. The support afforded ARMI by Congress has been influential in the program’s development and success. The value of ARMI’s efforts will continue to increase as we are able to extend our studies spatially and temporally to answer critical questions with more confidence. We are using ARMI’s resources efficiently and continuing to develop innovative mechanisms for leveraging resources for maximum effectiveness during challenging financial times. This report is a 5-year retrospective of the structure, methodology, progress, and contributions to the broader scientific community that have resulted from this national USGS program. We evaluate ARMI’s success to date, with regard to the challenges faced by the program and the strengths that have emerged. We chart objectives for the next 5 years that build on current accomplishments, highlight areas meriting further research, and direct efforts to overcome existing weaknesses.

Scientific Investigations Report↗

The National Climate Change and Wildlife Science Center annual report for 2013

In 2008, Congress created the National Climate Change and Wildlife Science Center (NCCWSC) within the U.S. Geological Survey (USGS). The center was formed to respond to the demands of natural resource managers for rigorous scientific information and effective tools for assessing and responding to climate change. Located at the USGS National Headquarters in Reston, Va., the NCCWSC has invested more than $93 million (through FY13) in cutting-edge climate change research and, in response to Secretarial Order No. 3289, established and is managing eight regional Department of Interior (DOI) Climate Science Centers (CSCs). In 2013: The DOI CSCs awarded nearly $7 million in funding to universities and other partners for climate and land-use change research. The scientific work of the NCCWSC-CSC enterprise moved toward projects that focus on ‘Science Infrastructure and Capacity Building’ and ‘Thematic Science’. A permanent director, David Helweg, Ph.D., was hired for the Pacific Islands CSC (PI CSC), completing the CSC leadership team. Staff scientists were hired at the Alaska (AK), Northeast (NE), and Southeast (SE) CSCs. Each of the eight CSCs completed the formation of regional Stakeholder Advisory Committees (SACs) and a national advisory committee (ACCCNRS) was created to oversee the NCCWSC-CSC enterprise. NCCWSC staff worked on creating a searchable public database on climate change vulnerability assessments. NCCWSC scientists authored articles in a special issue of the Ecological Society of America’s journal Frontiers in Ecology and the Environment, which was devoted to an assessment of climate change effects on biodiversity and ecosystems, and the consequences for people. Learn more about these achievements in The National Climate Change and Wildlife Science Center Annual Report for 2013 .

Circular↗

Managing the vanishing North American hunter: A novel framework to address declines in hunters and hunter-generated conservation funds

As long as the funding mechanism supporting state wildlife conservation relies heavily on hunter-generated funds, declines in hunter participation are a threat to the conservation of both game and non-game species. To address options to bolster wildlife agency profit from the sale of hunting licenses, we developed a stage-based, stochastic population model of a hunter population, and demonstrate its utility within a decision-making framework to inform state wildlife agency decisions. We evaluated hypothetical youth and adult recruitment-focused outreach programs over 10 years to increase license sale profit. Using our model as the core of a decision analysis, state agencies can set hunter population or license profit targets, and evaluate management actions designed to achieve those objectives. We anticipate that our approach will provide a valuable framework for anticipating the future of hunting and hunting-generated conservation funds, and can be extended to other user groups, including target shooters and anglers.

Human Dimensions of Wildlife: An International Jou↗

Prepublication communication of research results

Publishing of scientific findings is central to the scientific process, and it is traditional to consider findings “provisional” until accepted by a peer-reviewed journal. Until publication, communication of provisional findings beyond participants in the study is typically limited. This practice helps assure scientific integrity. However, a dilemma arises when a provisional finding has urgent societal consequences that may be exacerbated by delay. This dilemma may be particularly pronounced when a discovery concerns wildlife health, which could have implications for conservation, public health (i.e., zoonoses), or domestic animal health (e.g., avian influenza). A scientist may see a need for prepublication communication but consider such communication to be problematic. We suggest that common concerns about directed prepublication communication are generally misplaced. Our perspective comes from natural resources science and management, but we suspect that this situation could arise in any branch of science and that discussing these issues will help scientists who may not routinely work with public officials navigate an unfamiliar situation.

EcoHealth↗

Delineating ecologically-distinct groups for annual cycle management of a declining shorebird

1. Patterns of migratory connectivity are increasingly used to understand and manage threats throughout the annual cycle of migratory species. Strong migratory connectivity refers to when individuals from different populations remain spatially separated across the annual cycle, which may expose populations to unique sets of threats and conditions that cause differential population trends. However, the populations or groups used for species’ management are often defined a priori based on expert knowledge and/or management units, which may mask important population segregation and obscure differential population trends and their drivers. 2. We compared three approaches to defining management groups of a declining shorebird, the long-billed curlew ( Numenius americanus ), for annual cycle management: by expert-opinion, according to management flyways, and with unsupervised clustering of satellite tracking data that maximizes the strength of migratory connectivity. 3. Despite the curlews having a continuous breeding range and a pattern of parallel migration, all three approaches identified groups with different population trends, movement behaviours and habitat selection across the annual cycle, suggesting these are meaningful ecological groups. The expert and clustering approaches resulted in similar group structure, strong estimates of migratory connectivity (measured as MC = 0.64 across seasons), movement behaviour and habitat selection; however, the expert approach identified an additional divide between the easternmost grouping, which revealed strongly negative population trends in the group occupying the Chihuahuan desert during the stationary nonbreeding season. In contrast, the flyway delineation resulted in weaker estimates of migratory connectivity, marginal differences in population trends and less between-group differences in movement behaviour and habitat selection. 4. Synthesis and applications . Using measurements of migratory connectivity in concert with expert opinion can define ecologically distinct groups for wildlife management that differ in the environmental conditions they experience across seasons of the annual cycle, which is a key component for understanding and reversing declines of migratory species.

Journal of Applied Ecology↗

Abundance trends and status of the Little Colorado River population of humpback chub

The abundance of the Little Colorado River population of federally listed humpback chub Gila cypha in Grand Canyon has been monitored since the late 1980s by means of catch rate indices and capture-recapture-based abundance estimators. Analyses of data from all sources using various methods are consistent and indicate that the adult population has declined since monitoring began. Intensive tagging led to a high proportion (>80%) of the adult population being marked by the mid-1990s. Analysis of these data using both closed and open abundance estimation models yields results that agree with catch rate indices about the extent of the decline. Survival rates for age-2 and older fish are age dependent but apparently not time dependent. Back-calculation of recruitment using the apparent 1990s population age structure implies periods of higher recruitment in the late 1970s to early 1980s than is now the case. Our analyses indicate that the U.S. Fish and Wildlife Service recovery criterion of stable abundance is not being met for this population. Also, there is a critical need to develop new abundance indexing and tagging methods so that early, reliable, and rapid estimates of humpback chub recruitment can be obtained to evaluate population responses to management actions designed to facilitate the restoration of Colorado River native fish communities. ?? Copyright by the American Fisheries Society 2006.

North American Journal of Fisheries Management↗

Linking resources with demography to understand resource limitation for bears

1. Identifying the resources that limit growth of animal populations is essential for effective conservation; however, resource limitation is difficult to quantify. Recent advances in geographical information systems (GIS) and resource modelling can be combined with demographic modelling to yield insights into resource limitation. 2. Using long-term data on a population of black bears Ursus americanus, we evaluated competing hypotheses about whether availability of hard mast (acorns and nuts) or soft mast (fleshy fruits) limited bears in the southern Appalachians, USA, during 1981-2002. The effects of clearcutting on habitat quality were also evaluated. Annual survival, recruitment and population growth rate were estimated using capture-recapture data from 101 females. The availability of hard mast, soft mast and clearcuts was estimated with a GIS, as each changed through time as a result of harvest and succession, and then availabilities were incorporated as covariates for each demographic parameter. 3. The model with the additive availability of hard mast and soft mast across the landscape predicted survival and population growth rate. Availability of young clearcuts predicted recruitment, but not population growth or survival. 4. Availability of hard mast stands across the landscape and availability of soft mast across the landscape were more important than hard mast production and availability of soft mast in young clearcuts, respectively. 5. Synthesis and applications. Our results indicate that older stands, which support high levels of hard mast and moderate levels of soft mast, should be maintained to sustain population growth of bears in the southern Appalachians. Simultaneously, the acreage of intermediate aged stands (10-25 years), which support very low levels of both hard mast and soft mast, should be minimized. The approach used in this study has broad application for wildlife management and conservation. State and federal wildlife agencies often possess long-term data on both resource availability and capture-recapture for wild populations. Combined, these two data types can be used to estimate survival, recruitment, population growth, elasticities of vital rates and the effects of resource availability on demographic parameters. Hence data that are traditionally used to understand population trends can be used to evaluate how and why demography changes over time. ?? 2007 The Authors.

Journal of Applied Ecology↗

Annotated bibliography of scientific research relevant to oil and gas reclamation best management practices in the western United States, published from 1969 through 2020

Integrating recent scientific knowledge into management decisions supports effective natural resource management and can lead to better resource outcomes. However, finding and accessing scientific knowledge can be time consuming and costly. To assist in this process, the U.S. Geological Survey has created a series of annotated bibliographies on topics of management concern for lands in the western United States (U.S.). Oil and gas development on public lands is a long-standing and substantial component of local and regional economies and has expanded in recent decades, particularly on public lands in the western U.S. This development is associated with extensive networks of pipelines, roads, and processing facilities, across which reclamation is Federally mandated following initial well pad development (“interim” reclamation) and once resource extraction is complete (“final” reclamation). Reclamation is critical for recovering ecological services to energy-affected lands, including vegetation productivity, wildlife habitat, water and air quality, and soil stability (for example, resistance to wind and water erosion). However, reclamation of oil and gas affected lands in the western U.S. has proved challenging due to an array of regulatory and environmental factors, such as minimally developed soils, short growing seasons, herbivory, high winds, invasive species, rugged terrain, and in particular, arid climates associated with low total precipitation, high evapotranspiration rates, and highly variable precipitation patterns. We compiled and summarized journal articles, government reports, technical reports, proceedings, and theses and dissertations relevant to oil and gas reclamation. We constrained our search to products published on or before December 31, 2020 but did not limit our search by a starting date; the earliest product resulting from this effort was published in March 1969. Second, we manually scanned the last 15 years (2005-2020) of tables of contents in journals, bibliographies, and proceedings of which we were aware would contain articles highly relevant to this bibliography. We carried out the search for these products through multiple means: (1) performing a structured search of two reference databases, (2) examining articles published since 2005 in highly relevant scientific journals and conference proceedings, and (3) reviewing additional material suggested by authors of products identified in steps 1 and 2. Our search was intentionally broad in order to identify as much relevant work as possible, much of which is professionally applied and tested within the industry of oil and gas reclamation, but which remains unpublished in scientific journals. We refined the initial list of products by removing: (1) duplicates, (2) products not written in English, (3) products that were not relevant to the arid ecosystems of western North America, (4) products that were not released as research, data products, or review articles in journals or as formal scientific reports, and (5) products with data which were not relevant to reclamation of oil and gas-affected lands, or for which the study did not present new data, findings, or syntheses relevant to reclamation of oil and gas-affected lands. We summarized each product using a consistent structure (background, objectives, methods, location, findings, and implications) and assigned standardized management topics to each. Management topics are intended to aid online searching within the bibliography and are described in more detail in the Methods Section of this report; they include what type of disturbance the product addresses (well pads, mining, pipelines), what aspect of oil and gas reclamation they pertain to (practices, standards, monitoring), what type of data are present in the product (for instance soil or vegetation recovery data), and an indication if the product were from a source other than a published, peer-reviewed outlet (such as dissertations or unpublished professional reports – these are identified as grey literature). The review process for this annotated bibliography included an initial internal colleague review of each summary, requesting input on each summary from an author of the original product, and a formal peer-review. Our initial searches resulted in 3,197 total products, of which 290 met our criteria for inclusion. “Reclamation Practices” is by far the management topic most addressed, followed by “Reclamation Monitoring,” for example, products assessing what and how monitoring methods are used to track and measure reclamation outcome. This document may be accessed at https://doi.org/10.3133/ofr20231068 or from the U.S. Geological Survey Publication Warehouse ( https://pubs.usgs.gov/ ). The 1-page product summaries herein will also be used to create a bibliography at https://apps.usgs.gov/science-for-resource-managers that includes links to each original product, where available, and in which subject matter will be searchable by topic, location, and year. The studies compiled and summarized here may inform planning and management actions that seek to reclaim landscapes across the western U.S. which have been affected by oil and gas development.

Open-File Report↗

Seasonal activity patterns of northern long-eared bats at hibernacula in western Virginia

Understanding the relationships of biotic and abiotic factors to seasonal activity at hibernacula is important for the conservation of bats impacted by white-nose syndrome (WNS). Research on the relative and probable activity patterns of the federally endangered northern long-eared bat ( Myotis septentrionalis ) primarily has focused on summer maternity colonies, whereas surveys at hibernacula have traditionally relied on external capture and internal counts. We used passive acoustic monitoring to assess the relative and probable activity of northern long-eared bats at 13 hibernacula in western Virginia, from August 2020 to May 2022. Northern long-eared bats were most active near hibernacula during warmer weeks of the fall swarm and spring emergence, when rainfall was low. Similarly, the probability of northern long-eared bat activity was highest near hibernacula during the spring/summer season. However, unlike relative activity, the likelihood of recording northern long-eared bats was associated with more heterogeneous, interior forests. Our results suggest that northern long-eared bat activity largely follows the described pre-WNS hibernation phenology of the species. Therefore, acoustical surveys to monitor northern long-eared bat populations at hibernacula should focus on entrances during peak activity periods (mid-April and early September), rather than the nearby landscape. Finally, management to promote resource-rich foraging habitat adjacent to hibernacula for use during swarming and emergence may increase survival during hibernation, fitness for spring migration, and ultimately, improve the reproductive success of northern long-eared bats in western Virginia.

Virginia↗

Improving our legacy: Incorporation of adaptive management into state wildlife action plans

The loss of biodiversity is a mounting concern, but despite numerous attempts there are few large scale conservation efforts that have proven successful in reversing current declines. Given the challenge of biodiversity conservation, there is a need to develop strategic conservation plans that address species declines even with the inherent uncertainty in managing multiple species in complex environments. In 2002, the State Wildlife Grant program was initiated to fulfill this need, and while not explicitly outlined by Congress follows the fundamental premise of adaptive management, 'Learning by doing'. When action is necessary, but basic biological information and an understanding of appropriate management strategies are lacking, adaptive management enables managers to be proactive in spite of uncertainty. However, regardless of the strengths of adaptive management, the development of an effective adaptive management framework is challenging. In a review of 53 State Wildlife Action Plans, I found a keen awareness by planners that adaptive management was an effective method for addressing biodiversity conservation, but the development and incorporation of explicit adaptive management approaches within each plan remained elusive. Only ???25% of the plans included a framework for how adaptive management would be implemented at the project level within their state. There was, however, considerable support across plans for further development and implementation of adaptive management. By furthering the incorporation of adaptive management principles in conservation plans and explicitly outlining the decision making process, states will be poised to meet the pending challenges to biodiversity conservation. ?? 2010 .

Journal of Environmental Management↗

Between a rock and a hard place: Experiences of the chronic wasting disease management community

Chronic wasting disease (CWD) is a widespread and incurable cervid disease. Despite continuing investments, the logistical challenges of CWD have required wildlife managers and researchers to navigate changing priorities with conflicting public perceptions. When overcoming difficult management problems, leveraging exploratory methods may identify previously unrecognized hypotheses. In this study, we interviewed wildlife managers and researchers to describe the diverse experiences of experts in the CWD management community. Our study asked about common management strategies used, challenges experienced, and attempted to understand how decision-making in CWD management is shaped and constrained. Our study participants experienced a wide range of constraining factors, primarily related to external influences. We also identified connections between these constraints and a common concern for staff and public burnout. The results of this study provide insight on constraints limiting CWD management success and possible explanations for some commonly recognized challenges resulting from social and ecological interactions.

Journal of Society and Natural Resources↗

Efficacy of landscape scale woodland and savanna restoration at multiple spatial and temporal scales

The loss of historic ecosystem conditions has led forest managers to implement woodland and savanna ecosystem restoration on a landscape scale (≥10,000 ha) in the Ozark Plateau of Arkansas. Managers are attempting to restore and conserve these ecosystems through the reintroduction of disturbance, mainly short-rotation early-growing-season prescribed fire. Short-rotation early-growing season prescribed fire in the Ozarks typically occurs immediately before bud-break, through bud-break, and before leaf-out, and fire events occur on a three-to five-year interval. We examined short-rotation early-growing season prescribed fire as a restoration tool on vegetation characteristics. We collected vegetation measurements at 70 locations annually from 2011 to 2012 in and around the White Rock Ecosystem Restoration Area (WRERA), Ozark-St. Francis National Forest, Arkansas, and used generalized linear models to investigate the impact and efficacy of prescribed fire on vegetation structure. We found the number of large shrubs (>5 cm base diameter) decreased and small shrubs (<5 cm ground diameter) increased with prescribed fire severity. We found that horizontal understory cover from ground level to 1 m in height increased with time-since-prescribed-fire and woody ground cover decreased with the number of prescribed fire treatments. Using LANDFIRE datasets at the landscape scale, we found that since the initiation of a short-rotation early-growing season prescribed fire management regime, forest canopy cover has not reverted to levels characteristic of woodlands and savannas or reached restoration objectives over large areas. Without greater reductions in forest canopy cover and increases in forest-canopy cover heterogeneity, advanced regeneration will be limited in success, and woodland and savanna conditions will not return soon or to the extent desired.

Arkansas↗

Adaptive management in the U.S. National Wildlife Refuge System: Science-management partnerships for conservation delivery

Adaptive management is an approach to recurrent decision making in which uncertainty about the decision is reduced over time through comparison of outcomes predicted by competing models against observed values of those outcomes. The National Wildlife Refuge System (NWRS) of the U.S. Fish and Wildlife Service is a large land management program charged with making natural resource management decisions, which often are made under considerable uncertainty, severe operational constraints, and conditions that limit ability to precisely carry out actions as intended. The NWRS presents outstanding opportunities for the application of adaptive management, but also difficult challenges. We describe two cooperative programs between the Fish and Wildlife Service and the U.S. Geological Survey to implement adaptive management at scales ranging from small, single refuge applications to large, multi-refuge, multi-region projects. Our experience to date suggests three important attributes common to successful implementation: a vigorous multi-partner collaboration , practical and informative decision framework components , and a sustained commitment to the process. Administrators in both agencies should consider these attributes when developing programs to promote the use and acceptance of adaptive management in the NWRS.

Journal of Environmental Management↗

Managing National Wildlife Refuges for historic or non-historic conditions: Determining the role of the refuge in the ecosystem

The 1997 Refuge Improvement Act mandates that National Wildlife Refuges (NWR) develop Comprehensive Conservation Plans and that the Refuge System be administered in a manner that ensures the biological integrity, diversity, and environmental health of the System are maintained. Refuges must determine their role in the landscape and decide if refuge lands will be managed for historic or non-historic conditions. This decision should be based on an understanding of the Refuge Purpose and supported by available science. Case studies for Sherburne NWR and Bosque del Apache NWR illustrate two possible approaches to determining future management.

Natural Resources Journal↗

Adaptive harvest management of North American waterfowl populations: a brief history and future prospects

Since 1995, the US Fish and Wildlife Service has used an adaptive approach to the management of sport harvest of mid-continent Mallard ducks (Anas platyrhynchos) in North America. This approach differs from many current approaches to conservation and management in requiring close collaboration between managers and scientists. Key elements of this process are objectives, alternative management actions, models permitting prediction of system responses, and a monitoring program. The iterative process produces optimal management decisions and leads to reduction in uncertainty about response of populations to management. This general approach to management has a number of desirable features and is recommended for use in many other programs of management and conservation.

Journal of Ornithology↗

Harvesting wildlife affected by climate change: a modelling and management approach for polar bears

The conservation of many wildlife species requires understanding the demographic effects of climate change, including interactions between climate change and harvest, which can provide cultural, nutritional or economic value to humans. We present a demographic model that is based on the polar bear Ursus maritimus life cycle and includes density-dependent relationships linking vital rates to environmental carrying capacity ( K ). Using this model, we develop a state-dependent management framework to calculate a harvest level that (i) maintains a population above its maximum net productivity level (MNPL; the population size that produces the greatest net increment in abundance) relative to a changing K , and (ii) has a limited negative effect on population persistence. Our density-dependent relationships suggest that MNPL for polar bears occurs at approximately 0·69 (95% CI = 0·63–0·74) of K . Population growth rate at MNPL was approximately 0·82 (95% CI = 0·79–0·84) of the maximum intrinsic growth rate, suggesting relatively strong compensation for human-caused mortality. Our findings indicate that it is possible to minimize the demographic risks of harvest under climate change, including the risk that harvest will accelerate population declines driven by loss of the polar bear's sea-ice habitat. This requires that (i) the harvest rate – which could be 0 in some situations – accounts for a population's intrinsic growth rate, (ii) the harvest rate accounts for the quality of population data (e.g. lower harvest when uncertainty is large), and (iii) the harvest level is obtained by multiplying the harvest rate by an updated estimate of population size. Environmental variability, the sex and age of removed animals and risk tolerance can also affect the harvest rate. Synthesis and applications . We present a coupled modelling and management approach for wildlife that accounts for climate change and can be used to balance trade-offs among multiple conservation goals. In our example application to polar bears experiencing sea-ice loss, the goals are to maintain population viability while providing continued opportunities for subsistence harvest. Our approach may be relevant to other species for which near-term management is focused on human factors that directly influence population dynamics within the broader context of climate-induced habitat degradation.

Journal of Applied Ecology↗

Plague transforms positive effects of precipitation on prairie dogs to negative effects

Rodents characteristically benefit from increased precipitation, especially in typically dry habitats; “good years” of high precipitation improve their forage and water balance. However, Yersinia pestis (plague), a flea-borne pathogen of mammals that was introduced to western North America, has the greatest negative impact on at least some species of rodents during years of above-average precipitation. In the absence of plague mitigation, negative effects of plague in wet years might overwhelm the otherwise beneficial effects of increased moisture. In Montana and Utah, USA, where plague now occurs enzootically, we investigated the influence of precipitation on finite rates of annual population change (2000–2005) for 3 species of prairie dogs ( Cynomys spp.) in replicated plots treated with deltamethrin dust and in non-treated plots for paired comparisons. There was a significant interaction between precipitation and treatment. When we reduced plague vector fleas, prairie dog visual counts tended to increase with increasing precipitation. Simultaneously, there was a negative relationship between counts and precipitation on paired plots where plague was not managed, suggesting that plague transformed and reversed the otherwise beneficial effect of increased precipitation. Are the good years gone for prairie dogs? Even if the good years are not gone, they are perhaps relatively scarce compared to historic times prior to the invasion of plague. This scenario might apply to other ecosystems and may pose broad conservation challenges in western North America.

Montana, Utah↗

Annotated bibliography of scientific research on pygmy rabbits published from 1990 to 2020

Integrating recent scientific knowledge into management decisions supports effective natural resource management and can lead to better resource outcomes. However, finding and accessing scientific knowledge can be time consuming and costly. To assist in this process, the U.S. Geological Survey (USGS) is creating a series of annotated bibliographies on topics of management concern for western lands. Previously published reports introduced a methodology for preparing annotated bibliographies to facilitate the integration of recent, peer-reviewed science into resource management decisions. Therefore, relevant text from those efforts is reproduced here to frame the presentation. Sagebrush ecosystems throughout North America face management challenges including habitat loss and fragmentation. Brachylagus idahoensis (pygmy rabbits) are a sagebrush-obligate species that has experienced population declines and range contraction in recent decades. A disjunct population of pygmy rabbits in the Columbia Basin in Washington was listed as federally endangered in 2003. Due to their specialized habitat requirements and low dispersal ability, pygmy rabbits are a high priority for managers throughout their range. We compiled and summarized peer-reviewed journal articles, data products, and formal technical reports (such as U.S. Forest Service General Technical Reports and U.S. Geological Survey Open-File Reports) on pygmy rabbits published between January 1, 1990 and December 31, 2020. We first conducted a structured search of three reference databases and three government databases using the phrase “pygmy rabbit” or “ Brachylagus idahoensis .” We refined the initial list of products by removing (1) duplicates, (2) products not written in English, (3) publications that were not focused on North America, (4) publications that were not published as research, data products, or scientific review articles in peer-reviewed journals or as formal technical reports, and (5) products for which pygmy rabbits were not a research focus or for which the study did not present new data or findings about pygmy rabbits. We summarized each product using a consistent structure (background, objectives, methods, location, findings, and implications) and identified the management topics (for example, captive breeding, habitat characteristics, and population estimates) addressed by each product. We also noted which publications included new publicly available geospatial data. The review process for this annotated bibliography included an initial internal colleague review of each summary, requesting input on each summary from an author of the original publication, and a formal peer review. Our initial searches resulted in 2,285 total products, of which 105 met our criteria for inclusion. Sensitive/rare wildlife, behavior or demographics, site-scale habitat characteristics, habitat selection, and effects distances or spatial scale were the management topics most commonly addressed. The online version of this bibliography, Science for Resource Managers, will be searchable by topic, location, and year; it will include links to each original publication, where available. The studies compiled and summarized here may inform planning and management actions that seek to maintain and restore sagebrush landscapes and associated native species across the western United States.

Open-File Report↗