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At least 1,693 records · Page 94Linked to original sources
USGS2023

The effects of estradiol-17β on the sex reversal, survival, and growth of Red Shiner and its use in the development of YY individuals

Objective The Red Shiner Cyprinella lutrensis is one of the most prolific and ecologically destructive invasive fish species in the southwestern United States. The production and release of YY individuals as Trojan sex chromosome carriers can theoretically eradicate invasive fish populations by eventually eliminating phenotypic females. Methods The YY individuals are typically produced through hormonally induced sex reversals and selective breeding of subsequently feminized males. We tested three dosages of estradiol-17β (E2)-treated diets (50, 100, and 150 mg of E2 per kg of diet) administered to sexually immature Red Shiner for various durations to determine their effectiveness at feminizing Red Shiner cohorts. Survival, growth, and gonadal development were assessed for each treatment. Result All E2 treatments had minimal, if any, detrimental effects on the growth and gonadal development of Red Shiner. The 50-mg dosage lasting from 2 to 120 days posthatch achieved a 100% feminization rate while using the lowest amount of E2; therefore, this dosage and treatment interval are recommended when attempting Red Shiner feminization under these rearing conditions. Feminization of males allowed for the spawning of neofemales (F XY ) with wild-type males (M XY ), which resulted in the first putative YY Red Shiner. The YY verification crosses ( n = 20) resulted in predominately male offspring (189 males/191 offspring) except for (1) an intersex individual from an M YY × F XX cross with two previtellogenic oocytes in its testis and (2) a single female that may have resulted from an inbred cross between an XY male and a YY female or from an unknown autosomal or environmental effect on sexual phenotype. Conclusion More progeny tests with inbred and outbred crosses should be conducted to determine the prevalence of female offspring from YY individuals and how this may impact an eradication strategy featuring releases of YY Red Shiner.

North American Journal of Aquaculture↗
USGS2017

Fish assemblages

Methods to sample fishes in stream ecosystems and to analyze the raw data, focusing primarily on assemblage-level (all fish species combined) analyses, are presented in this chapter. We begin with guidance on sample site selection, permitting for fish collection, and information-gathering steps to be completed prior to conducting fieldwork. Basic sampling methods (visual surveying, electrofishing, and seining) are presented with specific instructions for estimating population sizes via visual, capture-recapture, and depletion surveys, in addition to new guidance on environmental DNA (eDNA) methods. Steps to process fish specimens in the field including the use of anesthesia and preservation of whole specimens or tissue samples (for genetic or stable isotope analysis) are also presented. Data analysis methods include characterization of size-structure within populations, estimation of species richness and diversity, and application of fish functional traits. We conclude with three advanced topics in assemblage-level analysis: multidimensional scaling (MDS), ecological networks, and loop analysis.

Book chapter↗
USGS2018

A spatially discrete, integral projection model and its application to invasive carp

Natural resource managers and ecologists often desire an understanding of spatial dynamics such as migration, dispersion, and meta-population dynamics. Network-node models can capture these salient features. Additionally, the state-variable used with many species may be appropriately modeled as a continuous variable (e.g., length) and management activities sometimes can only target individuals of certain sizes. Integral projection models (IPMs) can capture this life history characteristic and allow for the examination of size-specific management. We combined an IPM with a network-node model to capture both of these salient features. We then demonstrated how this model could be used to understand and manage populations of invasive species focusing on grass carp as an example. Grass carp disrupt ecosystems outside of their native range and have spread around much of the world, including North America. The impacts of grass carp include adversely changing aquatic plant communities, which in turn affect a wide range of endpoints ranging from water quality to waterfowl recruitment. We specifically examined two theoretical systems using parameters from the literature. First, we modeled a lake with two tributaries and examined how modified sterile males could be used as a control tool. We found that modified sterile males may be a feasible control tool to limit population growth. Second, we modeled a series of river pools and examined how harvest and deterrents could be used to decrease the risk of expanding grass carp's range within a river system. Within this system, we also compared the impacts of size specific harvest and uniform harvest across all sizes. We found that targeting the largest, spawning populations may be more important than targeting the populations close to the invasion front for reducing the risk of spreading grass carp. We also demonstrate that size of harvested fish was important for controlling populations.

Ecological Modelling↗
USGS2003

Application of adaptive cluster sampling to low-density populations of freshwater mussels

Freshwater mussels appear to be promising candidates for adaptive cluster sampling because they are benthic macroinvertebrates that cluster spatially and are frequently found at low densities. We applied adaptive cluster sampling to estimate density of freshwater mussels at 24 sites along the Cacapon River, WV, where a preliminary timed search indicated that mussels were present at low density. Adaptive cluster sampling increased yield of individual mussels and detection of uncommon species; however, it did not improve precision of density estimates. Because finding uncommon species, collecting individuals of those species, and estimating their densities are important conservation activities, additional research is warranted on application of adaptive cluster sampling to freshwater mussels. However, at this time we do not recommend routine application of adaptive cluster sampling to freshwater mussel populations. The ultimate, and currently unanswered, question is how to tell when adaptive cluster sampling should be used, i.e., when is a population sufficiently rare and clustered for adaptive cluster sampling to be efficient and practical? A cost-effective procedure needs to be developed to identify biological populations for which adaptive cluster sampling is appropriate.

Environmental and Ecological Statistics↗
USGS2022

Experimental inoculation trial to determine the effects of temperature and humidity on White-nose Syndrome in hibernating bats

Disease results from interactions among the host, pathogen, and environment. Inoculation trials can quantify interactions among these players and explain aspects of disease ecology to inform management in variable and dynamic natural environments. White-nose Syndrome, a disease caused by the fungal pathogen, Pseudogymnoascus destructans ( Pd ), has caused severe population declines of several bat species in North America. We conducted the first experimental infection trial on the tri-colored bat, Perimyotis subflavus , to test the effect of temperature and humidity on disease severity. We also tested the effects of temperature and humidity on fungal growth and persistence on substrates. Unexpectedly, only 37% (35/95) of bats experimentally inoculated with Pd at the start of the experiment showed any infection response or disease symptoms after 83 days of captive hibernation. There was no evidence that temperature or humidity influenced infection response. Temperature had a strong effect on fungal growth on media plates, but the influence of humidity was more variable and uncertain. Designing laboratory studies to maximize research outcomes would be beneficial given the high costs of such efforts and potential for unexpected outcomes. Understanding the influence of microclimates on host–pathogen interactions remains an important consideration for managing wildlife diseases, particularly in variable environments.

Scientific Reports↗
USGS2025

On the interface between cultural transmission, phenotypic diversity, demography and the conservation of migratory ungulates

Recent evidence indicates that green-wave surfing behaviour in ungulates and the migrations that stem from this behaviour are socially learned, culturally transmitted across generations and become more efficient via cumulative cultural evolution. But given a lack of corroborative evidence, whether ungulate migration is a cultural phenomenon remains a hypothesis deserving of further testing. In this opinion piece, we summarize the role memory and social learning play in the green-wave surfing that underlies ungulate migration, and when combined with the natural history of ungulates, we argue that the most likely mechanism for maintenance of ungulate migration is animal culture. We further our argument by providing a synopsis of processes that promote diversification of migratory behaviour and link these processes to their emergent ecological patterns, which are common in nature but have not historically been considered as potential cultural phenomena. The notion that diverse portfolios of migratory behaviour may buffer populations from environmental change emerges from this synthesis but requires empirical testing. Finally, we contend that, because the migratory behaviour of ungulates stems largely from cultural transmission as opposed to a genetic programme, the diversity of observed migratory strategies represents ‘culturally significant units’ deserving of the same conservation effort afforded to evolutionarily significant units.

Wyoming↗
USGS2014

Incubation success and habitat selection of shore-spawning kokanee Onchorhynchus nerka: effects of water level regulation and habitat characteristics.

Changes to water-level regimes have been known to restructure fish assemblages and interfere with the population dynamics of both littoral and pelagic species. The effect of altered water-level regimes on shore-spawning kokanee Oncorhynchus nerka incubation success was evaluated using a comprehensive in situ study in Lake Pend Oreille, ID, USA. Survival was not related to substrate size composition or depth, indicating that shore-spawning kokanee do not currently receive a substrate-mediated survival benefit from higher winter water levels. Substrate composition also did not differ among isobaths in the nearshore area. On average, the odds of an egg surviving to the preemergent stage were more than three times greater for sites in downwelling areas than those lacking downwelling. This study revealed that shoreline spawning habitat is not as limited as previously thought. Downwelling areas appear to contribute substantially to shore-spawning kokanee recruitment. This research illustrates the value of rigorous in situ studies both for testing potential mechanisms underlying population trends and providing insight into spawning habitat selection.

Ecology of Freshwater Fish↗
USGS2023

Food web changes reflected in age-0 piscivore diets and growth

Lake Erie walleye ( Stizostedion vitreum ) recruitment fluctuates annually and depends partially on their diet and growth during their first year of life. In recent decades, age-0 walleye diet and growth may be responding to food web changes in western Lake Erie. To determine how age-0 walleye have responded to changes in prey species and abundance, we compared diet between 2019, 2014 and 1994–1999. Larval walleye ate predominantly cyclopoids in 2019, compared to 1994–1999 when calanoids were the most consumed copepod. Juvenile walleye ate predominantly large cladocerans and benthic invertebrates in 2019, compared to 2014 and 1994 when fish was the most consumed prey. Additionally, in 2019 and 2014, age-0 walleye ate two of the current aquatic invasive species (AIS), Bythotrephes longimanu s and Neogobius melanostomus , and the historical AIS, Osmerus mordax . Age-0 walleye were smaller in 2019 than in 2014 and switched to consuming more AIS and less fish suggesting that more energetically favourable prey were not available. While age-0 walleye showed adaptation to new prey and conditions, they had a lower quality diet because they consumed less fish, but also because the invasive fish they now consume have a lower energy density than native species. However, lower quality diet and size may not result in reduced survival, if adequate alternative prey is available. Continued monitoring of age-0 walleye diet could provide confirmation that lower diet quality during the first year decreased walleye growth and aid to identify any effects changes in age-0 diets has on recruitment to the adult population.

Michigan, Ohio↗
USGS2019

Transient population dynamics impede restoration and may promote ecosystem transformation after disturbance

The apparent failure of ecosystems to recover from increasingly widespread disturbance is a global concern. Despite growing focus on factors inhibiting resilience and restoration, we still know very little about how demographic and population processes influence recovery. Using inverse and forward demographic modelling of 531 post‐fire sagebrush populations across the western US, we show that demographic processes during recovery from seeds do not initially lead to population growth but rather to years of population decline, low density, and risk of extirpation after disturbance and restoration, even at sites with potential to support long‐term, stable populations. Changes in population structure, and resulting transient population dynamics, lead to a > 50% decline in population growth rate after disturbance and significant reductions in population density. Our results indicate that demographic processes influence the recovery of ecosystems from disturbance and that demographic analyses can be used by resource managers to anticipate ecological transformation risk.

Ecology Letters↗
USGS2008

Rainfall effects on rare annual plants

Variation in climate is predicted to increase over much of the planet this century. Forecasting species persistence with climate change thus requires understanding of how populations respond to climate variability, and the mechanisms underlying this response. Variable rainfall is well known to drive fluctuations in annual plant populations, yet the degree to which population response is driven by between-year variation in germination cueing, water limitation or competitive suppression is poorly understood. We used demographic monitoring and population models to examine how three seed banking, rare annual plants of the California Channel Islands respond to natural variation in precipitation and their competitive environments. Island plants are particularly threatened by climate change because their current ranges are unlikely to overlap regions that are climatically favourable in the future. Species showed 9 to 100-fold between-year variation in plant density over the 5–12 years of censusing, including a severe drought and a wet El Niño year. During the drought, population sizes were low for all species. However, even in non-drought years, population sizes and per capita growth rates showed considerable temporal variation, variation that was uncorrelated with total rainfall. These population fluctuations were instead correlated with the temperature after the first major storm event of the season, a germination cue for annual plants. Temporal variation in the density of the focal species was uncorrelated with the total vegetative cover in the surrounding community, suggesting that variation in competitive environments does not strongly determine population fluctuations. At the same time, the uncorrelated responses of the focal species and their competitors to environmental variation may favour persistence via the storage effect. Population growth rate analyses suggested differential endangerment of the focal annuals. Elasticity analyses and life table response experiments indicated that variation in germination has the same potential as the seeds produced per germinant to drive variation in population growth rates, but only the former was clearly related to rainfall. Synthesis . Our work suggests that future changes in the timing and temperatures associated with the first major rains, acting through germination, may more strongly affect population persistence than changes in season-long rainfall.

Journal of Ecology↗
USGS2006

Fine-scale population genetic structure of a wildlife disease vector: The southern house mosquito on the island of Hawaii

The southern house mosquito, Culex quinquefasciatus, is a widespread tropical and subtropical disease vector. In the Hawaiian Islands, where it was introduced accidentally almost two centuries ago, it is considered the primary vector of avian malaria and pox. Avian malaria in particular has contributed to the extinction and endangerment of Hawaii's native avifauna, and has altered the altitudinal distribution of native bird populations. We examined the population genetic structure of Cx. quinquefasciatus on the island of Hawaii at a smaller spatial scale than has previously been attempted, with particular emphasis on the effects of elevation on population genetic structure. We found significant genetic differentiation among populations and patterns of isolation by distance within the island. Elevation per se did not have a limiting effect on gene flow; however, there was significantly lower genetic diversity among populations at mid elevations compared to those at low elevations. A recent sample taken from just above the predicted upper altitudinal distribution of Cx. quinquefasciatus on the island of Hawaii was confirmed as being a temporary summer population and appeared to consist of individuals from more than one source population. Our results indicate effects of elevation gradients on genetic structure that are consistent with known effects of elevation on population dynamics of this disease vector. ?? 2006 The Authors.

Molecular Ecology↗
USGS2021

Mapping out a future for ungulate migrations

Migration of ungulates (hooved mammals) is a fundamental ecological process that promotes abundant herds, whose effects cascade up and down terrestrial food webs. Migratory ungulates provide the prey base that maintains large carnivore and scavenger populations and underpins terrestrial biodiversity (fig. S1). When ungulates move in large aggregations, their hooves, feces, and urine create conditions that facilitate distinct biotic communities. The migrations of ungulates have sustained humans for thousands of years, forming tight cultural links among Indigenous people and local communities. Yet ungulate migrations are disappearing at an alarming rate ( 1 ). Efforts by wildlife managers and conservationists are thwarted by a singular challenge: Most ungulate migrations have never been mapped in sufficient detail to guide effective conservation. Without a strategic and collaborative effort, many of the world's great migrations will continue to be truncated, severed, or lost in the coming decades. Fortunately, a combination of animal tracking datasets, historical records, and local and Indigenous knowledge can form the basis for a global atlas of migrations, designed to support conservation action and policy at local, national, and international levels.

Science↗
USGS2025

Fine-scale farming features drive resource selection of a small carnivore of conservation concern

Anthropogenic factors are accelerating species extinction, with small mammalian carnivores among the most affected. These species play vital ecological roles, yet their conservation needs are often overlooked. Our study focused on the plains spotted skunk ( Spilogale interrupta (Rafinesque, 1820)), a small carnivore that has experienced population declines. We hypothesized that their resource selection was influenced by factors expected to influence prey availability, protection from predators, and human activity. We tracked 14 plains spotted skunks in east-central South Dakota, USA, over 2 years during spring and summer. Using mixed-effects logistic regression, we identified seasonal habitat associations. In spring, plains spotted skunks selected areas near farming structures and human development, avoiding high wetland density and crop cover. In summer, they continued to select areas near farming structures and low human development, but also high wetland density and pasture, while avoiding hay bales and crop cover. Our first analysis of the species’ resource use in the Great Plains indicates that plains spotted skunks select habitats with permanent small-scale agricultural features and varying levels of human development across seasons. Our findings suggest that species’ persistence in the region may depend on conservation strategies that account for seasonal planning, habitat heterogeneity, and key agricultural structures.

Canadian Journal of Zoology↗
USGS1995

Managing North American waterfowl in the face of uncertainty

Informed management of waterfowl (or any animal population) requires management goals and objectives, the ability to implement management actions, periodic information about population and goal-related varlables, and knowledge of effects of management actions on population and goal-related variables. In North America, international treaties mandate a primary objective of protecting migratory bird populations, with a secondary objective of providing hunting opportunity in a manner compatible with such protection. Through the years, annual establishment of hunting regulations and acquisition and man-agement of habitat have been the primary management actions taken by federal agencies. Various information-gathering programs were established and, by the 1960s, had developed into arguably the best monitoring system in the world for continentally distributed animal populations. Retrospective analyses using estimates from this monitoring system have been used to investigate effects of management actions on waterfowl population and harvest dynamics, but key relationships arc still characterized by uncertainty. We recommend actively adaptive management as an approach that can meet short-term harvest objectives, while reducing uncertainty and ensuring sustainable populations over the long-term.

Annual Review of Ecology and Systematics↗
USGS2024

Morphometry, growth, and condition of hatchery-reared Cisco (Coregonus artedi) and Bloater (Coregonus hoyi)

The re-introduction of native species that have been extirpated or in low abundance in the Great Lakes has been a binational initiative between the United States and Canadian governments. Recently, new management programs have been underway that use current hatchery facilities for the restoration of native forage fishes in Lake Ontario. These species include Bloater ( Coregonus hoyi ), which has been extirpated from Lake Ontario for approximately four decades, and Cisco ( C. artedi ), which exists at a fraction of its former abundance. We assessed morphometrics, length-weight relationships, and condition factors during early life development for eight cohorts of Cisco and Bloater reared from 2012-2019. Weekly samples for Cisco and Bloater were measured from hatch until release (29-45 weeks, 133-1,002 samples annually). Head width, gape, mandible length, and mouth height metrics were all larger for Cisco than Bloater at any given size but increased at similar rates for both species. Average condition factors for Cisco and Bloater were 0.54317 and 0.55892, respectively. This information may also improve field identification of these species, helping managers evaluate the relative success of different release strategies for rehabilitation of populations of these native species.

Ecology and Evolutionary Biology↗
USGS2017

Potential influence of wildfire in modulating climate-induced forest redistribution in a central Rocky Mountain landscape

Introduction Climate change is expected to impose significant tension on the geographic distribution of tree species. Yet, tree species range shifts may be delayed by their long life spans, capacity to withstand long periods of physiological stress, and dispersal limitations. Wildfire could theoretically break this biological inertia by killing forest canopies and facilitating species redistribution under changing climate. We investigated the capacity of wildfire to modulate climate-induced tree redistribution across a montane landscape in the central Rocky Mountains under three climate scenarios (contemporary and two warmer future climates) and three wildfire scenarios (representing historical, suppressed, and future fire regimes). Methods Distributions of four common tree species were projected over 90 years by pairing a climate niche model with a forest landscape simulation model that simulates species dispersal, establishment, and mortality under alternative disturbance regimes and climate scenarios. Results Three species (Douglas-fir, lodgepole pine, subalpine fir) declined in abundance over time, due to climate-driven contraction in area suitable for establishment, while one species (ponderosa pine) was unable to exploit climate-driven expansion of area suitable for establishment. Increased fire frequency accelerated declines in area occupied by Douglas-fir, lodgepole pine, and subalpine fir, and it maintained local abundance but not range expansion of ponderosa pine. Conclusions Wildfire may play a larger role in eliminating these conifer species along trailing edges of their distributions than facilitating establishment along leading edges, in part due to dispersal limitations and interspecific competition, and future populations may increasingly depend on persistence in locations unfavorable for their establishment.

Idaho↗
USGS2013

Mapping monkeypox transmission risk through time and space in the Congo Basin

Monkeypox is a major public health concern in the Congo Basin area, with changing patterns of human case occurrences reported in recent years. Whether this trend results from better surveillance and detection methods, reduced proportions of vaccinated vs. non-vaccinated human populations, or changing environmental conditions remains unclear. Our objective is to examine potential correlations between environment and transmission of monkeypox events in the Congo Basin. We created ecological niche models based on human cases reported in the Congo Basin by the World Health Organization at the end of the smallpox eradication campaign, in relation to remotely-sensed Normalized Difference Vegetation Index datasets from the same time period. These models predicted independent spatial subsets of monkeypox occurrences with high confidence; models were then projected onto parallel environmental datasets for the 2000s to create present-day monkeypox suitability maps. Recent trends in human monkeypox infection are associated with broad environmental changes across the Congo Basin. Our results demonstrate that ecological niche models provide useful tools for identification of areas suitable for transmission, even for poorly-known diseases like monkeypox.

PLoS ONE↗
USGS1943

The age, growth, and bathymetric distribution of Reighard's chub, Leucichthys reighardi koelz, in Lake Michigan

Reighard's chub has come to be one of the most important species of the group since the serious decline in abundance of the larger representatives of the genus Leucichthys in Lake Michigan. An understanding of the biology of as many species of chubs as possible is essential if further depletion and the collapse of the fishery are to be prevented. The age and growth of 331 individuals taken in 1932 were determined. Each of the other phases of the study is based on more than 5,000 specimens collected during the three years, 1930–1932. Reighard's chub occurred most abundantly, when not spawning, in depths of 20 to 60 fathoms where the temperature of the water ranged from 38.8 to 40.6° F. It was taken at all depths where the nets were set from 12 to 97 fathoms, and in water that varied from 34.7 to 50.6° F. The abundance on the east shore was seven times that on the west shore and between two and three times that in the upper part of the lake. The data indicate the existence of separate populations on the two shores. The greater exploitation with smaller meshes in the western part of the lake probably accounts for the relative scarcity in those waters. Ecological factors are considered the probable cause of the lesser abundance in the upper lake. Spawning occurs during May and June at depths of 20 to 79 fathoms, over a wide variety of bottom materials at temperatures of 38.8 to 40.5° F. Age-group IV dominated in the samples of fish whose ages were determined and made up 50.2 per cent of the total. Age-groups V and III were the next largest groups in that order. Growth in length was most rapid during the first year of life. Growth in weight was most rapid during the first three years with the annual increment in weight about the same in each of those years. The sexes grew in both length and weight at approximately the same rate. Growth compensation occurs in the reighardi of Lake Michigan, but the first year differences were not removed entirely by the time of capture in the fifth year. The weight of the fish in the combined samples increased as the 2.468 power of the length. No relationship between condition (K) and rate of growth could be demonstrated. Condition (K) was better in 1931 than in either 1930 or 1932 and usually was better in 1930 than in 1932. The seasonal changes in relative heaviness followed the same general trend irrespective of the sex or stage of maturity of the fish. The females lost 8 per cent of their weight in spawning, but no loss of weight could be demonstrated for the males. The females were always strongly dominant in the samples except during May and June 1931 and May 1932 when the sexes occurred in about equal numbers. The relative abundance of the sexes did not change materially in age-groups II to V. There were no males assigned to age-groups VI and VII.

Transactions of the American Fisheries Society↗