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Soil characteristics are associated with gradients of big sagebrush canopy structure after disturbance

Reestablishing shrub canopy cover after disturbance in semi-arid ecosystems, such as sagebrush steppe, is essential to provide wildlife habitat and restore ecosystem functioning. While several studies have explored the effects of landscape and climate factors on the success or failure of sagebrush seeding, the influence of soil properties on gradients of shrub canopy structure in successfully seeded areas remains largely unexplored. In this study, we evaluated associations between soil properties and gradients in sagebrush canopy structure in stands that had successfully reestablished after fire and subsequent seeding treatments. Using a dataset collected across the Great Basin, USA, of sagebrush stands that had burned and reestablished between 1986 and 2013, we tested soil depth and texture, soil surface classification, biological soil crusts plus mean historical precipitation, solar heatload, and fire history as modeling variables to explore gradients in sagebrush canopy structure growth in terms of cover, height, and density. Deeper soils were associated with greater sagebrush canopy structure development in terms of plant density and percent cover, coarser textured soils were associated with greater sagebrush cover and density, and more clayey soils were typically associated with greater height. Biological crust presence was also positively associated with enhanced sagebrush canopy growth, but adding more demographically or morphologically explicit descriptions of biocrust communities did not improve explanatory power. Increasing heatload had a negative effect on sagebrush canopy structure growth, and increased mean annual precipitation was only associated with greater sagebrush height. Given that conservation and restoration of the sagebrush steppe ecosystems has become a priority for land managers, the associations we identify between gradients in post-fire sagebrush canopy structure growth and field-identifiable soil characteristics may improve planning of land treatments for sagebrush restoration and the understanding of semi-arid ecosystem functioning and post-disturbance dynamics.

Ecosphere↗

U.S. Geological Survey science for the Wyoming Landscape Conservation Initiative—2014 annual report

This is the seventh report produced by the U.S. Geological Survey (USGS) for the Wyoming Landscape Conservation Initiative (WLCI) to detail annual activities conducted by the USGS for addressing specific management needs identified by WLCI partners. In FY2014, there were 26 projects, including a new one that was completed, two others that were also completed, and several that entered new phases or directions. The 26 projects fall into several categories: (1) synthesizing and analyzing existing data to identify current conditions on the landscape and using the data to develop models for projecting past and future landscape conditions; (2) monitoring indicators of ecosystem conditions and the effectiveness of on-the-ground habitat projects; (3) conducting research to elucidate the mechanisms underlying wildlife and habitat responses to changing land uses; (4) managing and making accessible the large number of databases, maps, and other products being developed; and (5) coordinating efforts among WLCI partners, helping them use USGS-developed decision-support tools, and integrating WLCI outcomes with future habitat enhancement and research projects. The new (completed) project was the development and publication of a public outreach piece for visitors of Fossil Butte National Monument. The final product was a USGS Fact Sheet that capitalized on previously collected elk-monitoring data to interpret the ecology of the Monument’s elk population and the importance of the Monument’s habitats to this highly visible wildlife species. One of the completed projects entailed developing and evaluating a synthetic approach to high-resolution satellite imagery for use in effectiveness monitoring, which culminated in a journal article. The other completed project was a coalescing of two similar tasks under data and information management that pertain to Web application development and the development of outreach and graphic products into a single integrated project that focuses on developing and maintaining/upgrading Web applications and other tools for visualizing, mapping, and using geospatial data. Major accomplishments for FY2014 included several publications, including Part B of an energy resources map that (with Part A) depicts coal, wind, oil, gas, oil shale, uranium, and solar energy production in the WLCI region. Two published works associated with sage-grouse included a Wildlife Monograph on prioritizing species’ habitats across large landscapes, multiple seasons, and novel areas (using sage-grouse in Wyoming as an example), and a USGS Data Series report that includes both the data used in the habitat-prioritization models and the habitat prioritization models developed for sage-grouse. Our Science Team also published a framework for conducting large, collaborative projects that rely on geospatial data, and a paper that describes the efficacy of fusing satellite data collected at various resolutions for measuring and monitoring vegetation changes. These products are all invaluable tools for maximizing the efficiency and effectiveness of managing species of concern, conducting future landscape-scale assessments, and monitoring status and trends of landscape conditions. Other highlights of FY2014 included a renewed effort to gather and analyze wildlife and habitat status and trend data for the WLCI Interagency Monitoring Database (IAMD) to assess long-term trends and cumulative effects associated with land-use and climate changes. Water-monitoring efforts included drilling four new groundwater-monitoring wells in the Green and New Fork River basins near the proposed Normally Pressured Lance Formation energy development, and continued data collection at established water-monitoring sites. Three additional wells were sampled as part of the Wyoming Groundwater Monitoring Network, bringing the total to 19 Network wells sampled in the WLCI region since 2010. Combined, these water-monitoring efforts can help to identify potential changes in water quality or levels that may result from land-use changes. Major terrestrial monitoring accomplishments included processing satellite imagery from 1985−2010 to develop a historical perspective of long-term vegetation changes, which can serve as a basis for monitoring current and future trends in sagebrush steppe. Such data are crucial tools for agencies tasked with sage-grouse management and conservation. The USGS WLCI Science Team also continued monitoring and testing methods for evaluating WLCI habitat treatments designed to promote aspen regeneration and enhance sage-grouse habitat, and to assess how those treatments influence invasive species distributions and ungulate herbivory. Highlights included analyzing field data collected to elucidate the relationships between sage-grouse habitat use and the proximity of energy infrastructure, and using new instruments to measure productivity responses of aspen woodlands to various factors. Numerous FY2014 accomplishments specifically addressed agency needs to manage and conserve Wyoming’s wildlife species of concern. A pygmy rabbit habitat model and Wyoming distribution map were completed to identify factors associated with rabbit habitat occupancy. Previous work on sage-grouse population dynamics was expanded to better understand the factors that drive long-term viability of sage-grouse populations and to develop a tool that helps to identify key factors limiting sage-grouse persistence in Wyoming. Field work and data analyses continued for elucidating the relationships between sagebrush songbird abundance and productivity, the intensity of energy development, and community dynamics of nest predators. For the mule deer study, mixed mountain shrublands important to migrating and wintering mule deer were mapped and delivered to WLCI partners. Additionally, the relationships between energy development and crucial winter habitat for mule deer were evaluated, and a new phase of work was implemented to better understand relationships between plant phenology and mule deer migration movements. Finally, initial analyses of data collected to evaluate fish-community composition in relation to habitat quality indicate that water quality, as measured by concentrations of hydrocarbons, water temperature, and others parameters, has been diminished in subwatersheds with higher levels of energy development. Overall, the outcomes and products of these wildlife studies contribute significantly to the information and tools needed for addressing effects of land-use changes on Wyoming’s species of concern. Finally, capabilities of the WLCI Web site and the USGS ScienceBase infrastructure were maintained and upgraded to help ensure access to and efficient use of all the WLCI data, products, assessment tools, and outreach materials that have been developed. Of particular note is the completion of three Web applications developed for mapping (1) the 1900−2008 progression of oil and gas development;(2) the predicted distributions of Wyoming’s Species of Greatest Conservation Need; and (3) the locations of coal and wind energy production, sage-grouse distribution and core management areas, and alternative routes for transmission lines within the WLCI region. Collectively, these applications tools provide WLCI planners and managers with powerful tools for better understanding the distributions of wildlife species and potential alternatives for energy development.

Wyoming↗

Rapid increases and time-lagged declines in amphibian occupancy after wildfire

Climate change is expected to increase the frequency and severity of drought and wildfire. Aquatic and moisture-sensitive species, such as amphibians, may be particularly vulnerable to these modified disturbance regimes because large wildfires often occur during extended droughts and thus may compound environmental threats. However, understanding of the effects of wildfires on amphibians in forests with long fire-return intervals is limited. Numerous stand-replacing wildfires have occurred since 1988 in Glacier National Park (Montana, U.S.A.), where we have conducted long-term monitoring of amphibians. We measured responses of 3 amphibian species to fires of different sizes, severity, and age in a small geographic area with uniform management. We used data from wetlands associated with 6 wildfires that burned between 1988 and 2003 to evaluate whether burn extent and severity and interactions between wildfire and wetland isolation affected the distribution of breeding populations. We measured responses with models that accounted for imperfect detection to estimate occupancy during prefire (0-4 years) and different postfire recovery periods. For the long-toed salamander (Ambystoma macrodactylum) and Columbia spotted frog (Rana luteiventris), occupancy was not affected for 6 years after wildfire. But 7-21 years after wildfire, occupancy for both species decreased ≥ 25% in areas where >50% of the forest within 500 m of wetlands burned. In contrast, occupancy of the boreal toad (Anaxyrus boreas) tripled in the 3 years after low-elevation forests burned. This increase in occupancy was followed by a gradual decline. Our results show that accounting for magnitude of change and time lags is critical to understanding population dynamics of amphibians after large disturbances. Our results also inform understanding of the potential threat of increases in wildfire frequency or severity to amphibians in the region.

Montana↗

Assessment of model estimates of land-atmosphere CO 2 exchange across northern Eurasia

A warming climate is altering land-atmosphere exchanges of carbon, with a potential for increased vegetation productivity as well as the mobilization of permafrost soil carbon stores. Here we investigate land-atmosphere carbon dioxide (CO 2 ) cycling through analysis of net ecosystem productivity (NEP) and its component fluxes of gross primary productivity (GPP) and ecosystem respiration (ER) and soil carbon residence time, simulated by a set of land surface models (LSMs) over a region spanning the drainage basin of Northern Eurasia. The retrospective simulations cover the period 1960–2009 at 0.5° resolution, which is a scale common among many global carbon and climate model simulations. Model performance benchmarks were drawn from comparisons against both observed CO 2 fluxes derived from site-based eddy covariance measurements as well as regional-scale GPP estimates based on satellite remote-sensing data. The site-based comparisons depict a tendency for overestimates in GPP and ER for several of the models, particularly at the two sites to the south. For several models the spatial pattern in GPP explains less than half the variance in the MODIS MOD17 GPP product. Across the models NEP increases by as little as 0.01 to as much as 0.79 g C m −2 yr −2 , equivalent to 3 to 340 % of the respective model means, over the analysis period. For the multimodel average the increase is 135 % of the mean from the first to last 10 years of record (1960–1969 vs. 2000–2009), with a weakening CO 2 sink over the latter decades. Vegetation net primary productivity increased by 8 to 30 % from the first to last 10 years, contributing to soil carbon storage gains. The range in regional mean NEP among the group is twice the multimodel mean, indicative of the uncertainty in CO 2 sink strength. The models simulate that inputs to the soil carbon pool exceeded losses, resulting in a net soil carbon gain amid a decrease in residence time. Our analysis points to improvements in model elements controlling vegetation productivity and soil respiration as being needed for reducing uncertainty in land-atmosphere CO 2 exchange. These advances will require collection of new field data on vegetation and soil dynamics, the development of benchmarking data sets from measurements and remote-sensing observations, and investments in future model development and intercomparison studies.

Biogeosciences↗

Changes in habitat suitability for wintering dabbling ducks during dry conditions in the Central Valley of California

In arid and Mediterranean regions, landscape-scale wetland conservation requires understanding how wildlife responds to dynamic freshwater availability and conservation actions to enhance wetland habitat. Taking advantage of Landsat satellite data and structured and community science bird survey data, we built species distribution models to describe how three duck species, the Northern Pintail ( Anas acuta ), Green-winged Teal ( Anas crecca ), and Northern Shoveler ( Anas clypeata ), respond to freshwater supply and food resources on different flooded land cover types in the Central Valley of California. Specifically, our models compared duck habitat suitability between the wettest and driest conditions in each month from September through April. Using abundance-weighted boosted regression trees, we created three sets of species occurrence models based on different covariates: (1) near real-time (hereafter “real-time”) covariates in which duck observations were matched to the water availability within the 16-day window of a Landsat observation, (2) a combination of real-time covariates and waterfowl food resource covariates describing annual corn and rice biomass and managed wetland moist soil seed yield estimates derived from Landsat data, and (3) long-term average covariates—the most common approach to species distribution modeling—in which long-term average surface water availability was used. We modeled the monthly occurrence of three duck species as a function of surface water availability, land cover type, road density, temperature, and bird data source. We found that dry conditions result in reduced habitat suitability, with the biggest reductions in November through January and in agricultural fields; in contrast, suitability of flooded wetland habitat was relatively robust to surface water availability. When models of habitat suitability based on long-term average climate conditions were compared to models based on real-time conditions, the highest long-term suitability values occurred in areas where suitability was high regardless of whether it was a wet or a dry year. While all models performed well, the inclusion of crop and wetland plant yield covariates resulted in slightly higher model performance. Overall, species distribution models created using data on the environmental conditions present at the time of bird observations can aid conservation efforts under extreme conditions over large spatial scales.

California↗

Satellite remote sensing of crop water use across the Missouri River Basin for 1986–2018 period

Understanding historical crop water use (CWU) dynamics is important to improve land and water management. In this study, well-validated (coefficient of determination = 0.91, percent bias = 4%, and percent root mean square error = 11.8%) Landsat-based actual evapotranspiration (ETa) time-series estimations were used to (1) assess summer season CWU (CWU-Su) dynamics, (2) investigate CWU-Su trends over the study period (1986–2018; 33 years) at the regional- and pixel-scales, and (3) attribute CWU-Su driving factors across Missouri River Basin. Spatial variability of the ETa estimations along with the observed bimodal probability density distribution of ETa highlighted a strong relation between land cover and water uses across the basin. The bimodal distribution of ETa also indicated the presence of two major landcovers in the basin. The drier foothill regions in northwestern Missouri River Basin, dominated by grassland/shrubland, showed lower ETa (< 500 mm/year), whereas cropland dominated regions in lower semi-humid basin and forested subbasins exhibited higher ETa (> 600 mm/year). The CWU-Su anomalies revealed the vulnerability of the basin to year-to-year weather conditions. The CWU-Su trend analysis revealed a significant positive trend (p < 0.1) at the regional-scale affecting 30% of basin’s cropland pixels. The cropland pixels under positive CWU-Su trend were found to be clustered in the eastern and central Missouri River Basin as a result of the combined effect of increased crop production area, increased crop yields, crop practice shifts to higher biomass crops, and increased irrigated land. The effect of improved irrigation and water management practices on reducing CWU-Su was observed in western Missouri River Basin, which had a stable major crop throughout the study period. Overall, the study highlights the usefulness of Landsat imagery and remote sensing-based ETa modeling approaches in generating historical time-series ETa maps over a wide range of elevation, vegetation, and climate.

Missouri River Basin↗

Mismatch-induced growth reductions in a clade of Arctic-breeding shorebirds are rarely mitigated by increasing temperatures

In seasonal environments subject to climate change, organisms typically show phenological changes. As these changes are usually stronger in organisms at lower trophic levels than those at higher trophic levels, mismatches between consumers and their prey may occur during the consumers’ reproduction period. While in some species a trophic mismatch induces reductions in offspring growth, this is not always the case. This variation may be caused by the relative strength of the mismatch, or by mitigating factors like increased temperature-reducing energetic costs. We investigated the response of chick growth rate to arthropod abundance and temperature for six populations of ecologically similar shorebirds breeding in the Arctic and sub-Arctic (four subspecies of Red Knot Calidris canutus , Great Knot C . tenuirostris and Surfbird C . virgata ). In general, chicks experienced growth benefits (measured as a condition index) when hatching before the seasonal peak in arthropod abundance, and growth reductions when hatching after the peak. The moment in the season at which growth reductions occurred varied between populations, likely depending on whether food was limiting growth before or after the peak. Higher temperatures led to faster growth on average, but could only compensate for increasing trophic mismatch for the population experiencing the coldest conditions. We did not find changes in the timing of peaks in arthropod availability across the study years, possibly because our series of observations was relatively short; timing of hatching displayed no change over the years either. Our results suggest that a trend in trophic mismatches may not yet be evident; however, we show Arctic-breeding shorebirds to be vulnerable to this phenomenon and vulnerability to depend on seasonal prey dynamics.

Global Change Biology↗

Evaluating the potential for near-shore bathymetry on the Majuro Atoll, Republic of the Marshall Islands, using Landsat 8 and WorldView-3 imagery

Satellite-derived near-shore bathymetry (SDB) is becoming an increasingly important method for assessing vulnerability to climate change and natural hazards in low-lying atolls of the northern tropical Pacific Ocean. Satellite imagery has become a cost-effective means for mapping near-shore bathymetry because ships cannot collect soundings safely while operating close to the shore. Also, green laser light detection and ranging (lidar) acquisitions are expensive in remote locations. Previous research has demonstrated that spectral band ratio-based techniques, commonly called the natural logarithm approach, may lead to more precise measurements and modeling of bathymetry because of the phenomenon that different substrates at the same depth have approximately equal ratio values. The goal of this research was to apply the band ratio technique to Landsat 8 at-sensor radiance imagery and WorldView-3 atmospherically corrected imagery in the coastal waters surrounding the Majuro Atoll, Republic of the Marshall Islands, to derive near-shore bathymetry that could be incorporated into a seamless topobathymetric digital elevation model of Majuro. Attenuation of light within the water column was characterized by measuring at-sensor radiance and reflectance at different depths and calculating an attenuation coefficient. Bathymetric lidar data, collected by the U.S. Naval Oceanographic Office in 2006, were used to calibrate the SDB results. The bathymetric lidar yielded a strong linear relation with water depths. The Landsat 8-derived SDB estimates derived from the blue/green band ratio exhibited a water attenuation extinction depth of 6 meters with a coefficient of determination R 2 =0.9324. Estimates derived from the coastal/red band ratio had an R 2 =0.9597. At the same extinction depth, SDB estimates derived from WorldView-3 imagery exhibited an R 2 =0.9574. Because highly dynamic coastal shorelines can be affected by erosion, wetland loss, hurricanes, sea-level rise, urban development, and population growth, consistent bathymetric data are needed to better understand sensitive coastal land/water interfaces in areas subject to coastal disasters.

Majuro Atoll↗

Alternative community structures in a kelp-urchin community: A qualitative modeling approach

Shifts in interaction patterns within a community may result from periodic disturbances and climate. The question arises as to the extent and significance of these shifting patterns. Using a novel approach to link qualitative mathematical models and field data, namely using the inverse matrix to identify the community matrix, we reconstructed community networks from kelp forests off the Oregon Coast. We simulated all ecologically plausible interactions among community members, selected the models whose outcomes match field observations, and identified highly frequent links to characterize the community network from a particular site. We tested all possible biologically reasonable community networks through qualitative simulations, selected those that matched patterns observed in the field, and further reduced the set of possibilities by retaining those that were stable. We found that a community can be represented by a set of alternative structures, or scenarios. From 11,943,936 simulated models, 0.23% matched the field observations; moreover, only 0.006%, or 748 models, were highly reliable in their predictions and met conditions for stability. Predator-prey interactions as well as non-predatory relationships were consistently found in most of the 748 models. These highly frequent connections were useful to characterize the community network in the study site. We suggest that alternative networks provide the community with a buffer to disturbance, allowing it to continuously reorganize to adapt to a variable environment. This is possible due to the fluctuating capacities of foraging species to consume alternate resources. This suggestion is sustained by our results, which indicate that none of the models that matched field observations were fully connected. This plasticity may contribute to the persistence of these communities. We propose that qualitative simulations represent a powerful technique to raise new hypotheses concerning community dynamics and to reconstruct guidelines that may govern community patterns. ?? 2007 Elsevier B.V. All rights reserved.

Ecological Modelling↗

Validating a time series of annual grass percent cover in the sagebrush ecosystem

We mapped yearly (2000–2016) estimates of annual grass percent cover for much of the sagebrush ecosystem of the western United States using remotely sensed, climate, and geophysical data in regression-tree models. Annual grasses senesce and cure by early summer and then become beds of fine fuel that easily ignite and spread fire through rangeland systems. Our annual maps estimate the extent of these fuels and can serve as a tool to assist land managers and scientists in understanding the ecosystem’s response to weather variations, disturbances, and management. Validating the time series of annual maps is important for determining the usefulness of the data. To validate these maps, we compare Bureau of Land Management Assessment Inventory and Monitoring (AIM) data to mapped estimates and use a leave-one-out spatial assessment technique that is effective for validating maps that cover broad geographical extents. We hypothesize that the time series of annual maps exhibits high spatiotemporal variability because precipitation is highly variable in arid and semiarid environments where sagebrush is native, and invasive annual grasses respond to precipitation. The remotely sensed data that help drive our regression-tree model effectively measures annual grasses’ response to precipitation. The mean absolute error (MAE) rate varied depending on the validation data and technique used for comparison. The AIM plot data and our maps had substantial spatial incongruence, but despite this, the MAE rate for the assessment equaled 12.62%. The leave-one-out accuracy assessment had an MAE of 8.43%. We quantified bias, and bias was more substantial at higher percent cover. These annual maps can help management identify actions that may alleviate the current cycle of invasive grasses because it enables the assessment of the variability of annual grass − percent cover distribution through space and time, as part of dynamic systems rather than static systems.

Rangeland Ecology and Management↗

Relations between rainfall–runoff-induced erosion and aeolian deposition at archaeological sites in a semi-arid dam-controlled river corridor

Process dynamics in fluvial-based dryland environments are highly complex with fluvial, aeolian, and alluvial processes all contributing to landscape change. When anthropogenic activities such as dam-building affect fluvial processes, the complexity in local response can be further increased by flood- and sediment-limiting flows. Understanding these complexities is key to predicting landscape behavior in drylands and has important scientific and management implications, including for studies related to paleoclimatology, landscape ecology evolution, and archaeological site context and preservation. Here we use multi-temporal LiDAR surveys, local weather data, and geomorphological observations to identify trends in site change throughout the 446-km-long semi-arid Colorado River corridor in Grand Canyon, Arizona, USA, where archaeological site degradation related to the effects of upstream dam operation is a concern. Using several site case studies, we show the range of landscape responses that might be expected from concomitant occurrence of dam-controlled fluvial sand bar deposition, aeolian sand transport, and rainfall-induced erosion. Empirical rainfall-erosion threshold analyses coupled with a numerical rainfall&ndash;runoff&ndash;soil erosion model indicate that infiltration-excess overland flow and gullying govern large-scale (centimeter- to decimeter-scale) landscape changes, but that aeolian deposition can in some cases mitigate gully erosion. Whereas threshold analyses identify the normalized rainfall intensity (defined as the ratio of rainfall intensity to hydraulic conductivity) as the primary factor governing hydrologic-driven erosion, assessment of false positives and false negatives in the dataset highlight topographic slope as the next most important parameter governing site response. Analysis of 4+ years of high resolution (four-minute) weather data and 75+ years of low resolution (daily) climate records indicates that dryland erosion is dependent on short-term, storm-driven rainfall intensity rather than cumulative rainfall, and that erosion can occur outside of wet seasons and even wet years. These results can apply to other similar semi-arid landscapes where process complexity may not be fully understood.

Arizona↗

Seasonal and spatial distribution of bacterial biomass and the percentage of viable cells in a reservoir of Alabama

Spatial community dynamics of bacterioplankton were evaluated along the length of the former stream channel of Elledge Lake, a small reservoir in western Alabama. The reservoir was strongly stratified from April to October with up to a 10??C temperature difference across the 1 m deep metalimnion. Bacterial biomass was highest during late summer, with a general pattern of increasing abundance from the inflowing river (???10 ??g C l-1) to the dam (???20-30 ??g C l-1). Bacterial numbers also increased following a >10-fold increase in turbidity associated with a major precipitation event, although only ???10% of these cells were viable. The percentage of viable cells generally increased through the stratified period with 50-70% viable cells in late summer. Overall, an average of 38% of bacterial cells were viable, with a range from <20 to 70%. Although these values were similar to those found by others, additional patterns were identified that have not been previously observed: a marked decline in viable cells was found following turbid storm inflows and increases in the percentage of viable cells occurred during spring warming and following autumnal mixing events. Although a modest increase in abundance occurred along the gradient from inflow down-reservoir to the dam, bacterial abundance did not increase near the dam in a pattern coincident with the commonly observed increased algal biomass in the lacustrine portion of reservoir ecosystems. The increases observed in bacterial viability moving from the inflowing rivers towards the dam and later in stratified periods stress the importance of differences in environmental conditions in time and space in regulating bacterial biomass and development, as well as of shifts that would be anticipated accompanying altered hydrological regimes under climatic change.

Journal of Plankton Research↗

Experimental changes in food and ectoparasites affect dispersal timing in juvenile burrowing owls

Natal dispersal is a key demographic trait that affects population dynamics, and intraspecific variation in dispersal affects gene flow among populations and source-sink dynamics. However, relatively little is known about the selective pressures and trade-offs that animals face when departing their natal area due to the logistical difficulties associated with monitoring animals during this critical life stage. We used a randomized block design to examine the selective pressure that influence dispersal timing in juvenile burrowing owls ( Athene cunicularia ) by experimentally altering both food and ectoparasites at 135 nests. We also examined the effects of local food abundance, ectoparasite loads, and parental departure on natal dispersal timing. Juvenile burrowing owls varied widely in natal dispersal timing, and phenotypic plasticity in dispersal timing was evident in juvenile owls’ response to our experimental treatments, local conditions, and their parents’ departure from the natal area. Moreover, juveniles responded differently than their parents to experimental manipulation of food and ectoparasite loads. Juveniles typically dispersed shortly after their parents departed the natal area, but delayed dispersing more than 2 weeks after parental departure if they did not receive experimental food supplements during a low-food year. In contrast, the experimental food supplements did not affect the migratory departure decisions of adult owls in either year. Juveniles at nests treated for ectoparasites initiated dispersal at a younger age (and prior to adults in the high-food year) compared to juveniles at control nests. In contrast, parents at nests treated for ectoparasites departed later than parents at control nests. Our results suggest that unfavorable conditions (low food or high ectoparasite loads) caused juveniles to delay dispersal, but prompted adults to depart sooner. Our results highlight the extent of intraspecific variation in natal dispersal timing, and demonstrate that ecological conditions affect dispersal decisions of parents and offspring differently, which can create important trade-offs that likely affect life history strategies and responses to climatic changes.

Washington↗

Measuring SO2 emission rates at Kīlauea Volcano, Hawaii, using an array of upward-looking UV spectrometers, 2014-2017

Retrieving accurate volcanic sulfur dioxide (SO 2 ) gas emission rates is important for a variety of purposes. It is an indicator of shallow subsurface magma, and thus may signal impending eruption or unrest. SO 2 emission rates are significant for accurately assessing climate impact, and providing context for assessing environmental, agricultural, and human health effects during volcanic eruptions. The U.S. Geological Survey Hawaiian Volcano Observatory uses an array of ten fixed, upward-looking ultraviolet spectrometer systems to measure SO 2 emission rates at 10-s sample intervals from the Kīlauea summit. We present Kīlauea SO 2 emission rates from the volcano’s summit and middle East Rift Zone during 2014–2017 and discuss the major sources of error for these measurements. Due to the wide range of SO 2 emissions encountered at the summit vent, we used a variable wavelength spectral analysis range to accurately quantify both high and low SO 2 column densities. We compare measured emission rates from the fixed spectrometer array to independent road and helicopter-based traverse measurements and evaluate the magnitudes and sources of uncertainties for each method. To address the challenge of obtaining accurate plume speed measurements, we examine ground-based wind-speed, plume speed tracking via spectrometer, and SO 2 camera derived plume speeds. Our analysis shows that: (1) the summit array column densities calculated using a dual fit window, are within -6 to +22% of results obtained with a variety of other conventional and experimental retrieval methods; (2) emission rates calculated from the summit array located ∼3 km downwind provide the best, practical estimate of summit SO 2 release under normal trade wind conditions; (3) ground-based anemometer wind speeds are 22% less than plume speeds determined by cross-correlation of plume features; (4) our best estimate of average Kīlauea SO 2 release for 2014–2017 is 5100 t/d, which is comparable to the space-based OMI emissions of 5518 t/d; and (5) short-term variability of SO 2 emissions reflects Kīlauea lava lake dynamics.

Hawaii↗

Modeling impacts of saltwater intrusion on methane and nitrous oxide emissions in tidal forested wetlands

Emissions of methane (CH 4 ) and nitrous oxide (N 2 O) from soils to the atmosphere can offset the benefits of carbon sequestration for climate change mitigation. While past study has suggested that both CH 4 and N 2 O emissions from tidal freshwater forested wetlands (TFFW) are generally low, the impacts of coastal droughts and drought-induced saltwater intrusion on CH 4 and N 2 O emissions remain unclear. In this study, a process-driven biogeochemistry model, Tidal Freshwater Wetland DeNitrification-DeComposition (TFW-DNDC) was applied to examine the responses of CH 4 and N 2 O emissions to episodic drought-induced saltwater intrusion in TFFW along the Waccamaw River and Savannah River, USA. These sites encompass landscape gradients of both surface and porewater salinity as influenced by Atlantic Ocean tides superimposed on periodic droughts. Surprisingly, CH 4 and N 2 O emission responsiveness to coastal droughts and drought-induced saltwater intrusion varied greatly between river systems and among local geomorphologic settings. This reflected the complexity of wetland CH 4 and N 2 O emissions and suggests that simple linkages to salinity may not always be relevant, as non-linear relationships dominated our simulations. Along the Savannah River, N 2 O emissions in the moderate-oligohaline tidal forest site tended to increase dramatically under the drought condition, while CH 4 emission decreased. For the Waccamaw River, emissions of both CH 4 and N 2 O in the moderate-oligohaline tidal forest site tended to decrease under the drought condition, but the capacity of the moderate-oligohaline tidal forest to serve as a carbon sink was substantially reduced due to significant declines in net primary productivity and soil organic carbon sequestration rates as salinity killed the dominant freshwater vegetation. These changes in fluxes of CH 4 and N 2 O reflect crucial synergistic effects of soil salinity and water level on C and N dynamics in TFFW due to drought-induced seawater intrusion.

Ecological Applications↗

Resolving terrestrial ecosystem processes along a subgrid topographic gradient for an earth-system model

Soil moisture is a crucial control on surface water and energy fluxes, vegetation, and soil carbon cycling. Earth-system models (ESMs) generally represent an areal-average soil-moisture state in gridcells at scales of 50–200 km and as a result are not able to capture the nonlinear effects of topographically-controlled subgrid heterogeneity in soil moisture, in particular where wetlands are present. We addressed this deficiency by building a subgrid representation of hillslope-scale topographic gradients, TiHy (Tiled-hillslope Hydrology), into the Geophysical Fluid Dynamics Laboratory (GFDL) land model (LM3). LM3-TiHy models one or more representative hillslope geometries for each gridcell by discretizing them into land model tiles hydrologically coupled along an upland-to-lowland gradient. Each tile has its own surface fluxes, vegetation, and vertically-resolved state variables for soil physics and biogeochemistry. LM3-TiHy simulates a gradient in soil moisture and water-table depth between uplands and lowlands in each gridcell. Three hillslope hydrological regimes appear in non-permafrost regions in the model: wet and poorly-drained, wet and well-drained, and dry; with large, small, and zero wetland area predicted, respectively. Compared to the untiled LM3 in stand-alone experiments, LM3-TiHy simulates similar surface energy and water fluxes in the gridcell-mean. However, in marginally wet regions around the globe, LM3-TiHy simulates shallow groundwater in lowlands, leading to higher evapotranspiration, lower surface temperature, and higher leaf area compared to uplands in the same gridcells. Moreover, more than four-fold larger soil carbon concentrations are simulated globally in lowlands as compared with uplands. We compared water-table depths to those simulated by a recent global model-observational synthesis, and we compared wetland and inundated areas diagnosed from the model to observational datasets. The comparisons demonstrate that LM3-TiHy has the capability to represent some of the controls of these hydrological variables, but also that improvement in parameterization and input datasets are needed for more realistic simulations. We found large sensitivity in model-diagnosed wetland and inundated area to the depth of conductive soil and the parameterization of macroporosity. With improved parameterization and inclusion of peatland biogeochemical processes, the model could provide a new approach to investigating the vulnerability of Boreal peatland carbon to climate change in ESMs.

Hydrology and Earth System Sciences↗

Users' guide to system dynamics model describing Coho salmon survival in Olema Creek, Point Reyes National Seashore, Marin County, California

The system dynamics model described in this report is the result of a collaboration between U.S. Geological Survey (USGS) scientists and National Park Service (NPS) San Francisco Bay Area Network (SFAN) staff, whose goal was to develop a methodology to integrate inventory and monitoring data to better understand ecosystem dynamics and trends using salmon in Olema Creek, Marin County, California, as an example case. The SFAN began monitoring multiple life stages of coho salmon (Oncorhynchus kisutch) in Olema Creek during 2003 (Carlisle and others, 2013), building on previous monitoring of spawning fish and redds. They initiated water-quality and habitat monitoring, and had access to flow and weather data from other sources. This system dynamics model of the freshwater portion of the coho salmon life cycle in Olema Creek integrated 8 years of existing monitoring data, literature values, and expert opinion to investigate potential factors limiting survival and production, identify data gaps, and improve monitoring and restoration prescriptions. A system dynamics model is particularly effective when (1) data are insufficient in time series length and/or measured parameters for a statistical or mechanistic model, and (2) the model must be easily accessible by users who are not modelers. These characteristics helped us meet the following overarching goals for this model: Summarize and synthesize NPS monitoring data with data and information from other sources to describe factors and processes affecting freshwater survival of coho salmon in Olema Creek. Provide a model that can be easily manipulated to experiment with alternative values of model parameters and novel scenarios of environmental drivers. Although the model describes the ecological dynamics of Olema Creek, these dynamics are structurally similar to numerous other coastal streams along the California coast that also contain anadromous fish populations. The model developed for Olema can be used, at least as a starting point, for other watersheds. This report describes each of the model elements with sufficient detail to guide the primary target audience, the NPS resource specialist, to run the model, interpret the results, change the input data to explore hypotheses, and ultimately modify and improve the model. Running the model and interpreting the results does not require modeling expertise on the part of the user. Additional companion publications will highlight other aspects of the model, such as its development, the rationale behind the methodological approach, scenario testing, and discussions of its use. System dynamics models consist of three basic elements: stocks , flows , and converters . Stocks are measurable quantities that can change over time, such as animal populations. Flows are any processes or conditions that change the quantity in a stock over time (Ford, 1999), are expressed in the model as a rate of change, and are diagrammed as arrows to or from stocks. Converters are processes or conditions that change the rate of flows. A converter is connected to a flow with an arrow indicating that it alters the rate of change. Anything that influences the rate of change (such as different environmental conditions, other external factors, or feedbacks from other stocks or flows) is modeled as a converter. For example, the number of fish in a population is appropriately modeled as a stock. Mortality is modeled as a flow because it is a rate of change over time used to determine the number of fish in the population. The density-dependent effect on mortality is modeled as a converter because it influences the rate of morality. Together, the flow and converter change the number, or stock, of juvenile coho. The instructions embedded in the stocks, flows, converters, and the sequence in which they are linked are processed by the simulation software with each completed sequence composing a model run. At each modeled time step within the model run, the stock counts will go up, down, or stay the same based on the modeled flows and the influence of converters on those flows. The model includes a user-friendly interface to change model parameters, which allows park staff and others to conduct sensitivity analyses, incorporate future knowledge, and implement scenarios for various future conditions. The model structure incorporates place holders for relationships that we hypothesize are significant but data are currently lacking. Future climate scenarios project stream temperatures higher than any that have ever been recorded at Olema Creek. Exploring climate change impacts on coho survival is a high priority for park staff, therefore the model provides the user with the option to experiment with hypothesized effects and to incorporate effects based on future observations.

California↗

History and dynamics of the Greater Yellowstone Glacial System during the last two glaciations

The Greater Yellowstone Glacial System (GYGS) covered about 20,000 km2 at its maximum Pleistocene extent. The initiation, culmination, and ultimate decay of the GYGS involved complex interactions between several coalescent ice masses flowing from glacial source areas adjoining and including the Yellowstone Plateau. Here, we present an updated review of the history and dynamics of the GYGS during the penultimate (Bull Lake) and last (Pinedale) glaciations, drawing upon an integration of glacial-geologic mapping with >130 cosmogenic 10Be and 3He exposure ages. Bull Lake glacial deposits in greater Yellowstone are dated to ca. 150–140 ka and correlate with marine isotope stage 6. The Bull Lake glaciation extended well beyond the Pinedale along the southern and western GYGS margins, but Pinedale glaciers overrode Bull Lake ice limits on the north and east sides. The northeastward shift of the center of ice mass from Bull Lake to Pinedale time may be explained by uplift on the leading edge of the Yellowstone hotspot and subsidence on the trailing margin. In early Pinedale time (∼22–18 ka), ice buildup culminated in the high terrain of the Beartooth Uplift and High Absaroka Range. Glaciers from these source regions flowed onto the northeastern margin of the Yellowstone Plateau and advanced to terminal moraines beyond Clarks Fork Canyon and in Jackson Hole. By middle Pinedale time (∼18–16 ka), the Yellowstone Plateau ice cap surface had risen above the equilibrium-line altitude, stimulating orographic glacial buildup nourished by storms funneled eastward through the Snake River Plain. The plateau ice cap eventually thickened to >1000 m and joined glaciers from the Beartooth Uplift and Gallatin Range to form the northern Yellowstone outlet glacier. Terrain east and downwind of the ice cap crest was placed in a precipitation shadow, resulting in glacial recession in these regions. During the late Pinedale (∼16–13 ka), the plateau ice cap prograded southwestward toward the direction of moisture supply, leading to advances along the southern and western margins of the GYGS. Northern sectors of the plateau ice cap were nearly stagnant at this time. The Yellowstone region experienced widespread deglaciation ca. 15–14 ka in response to warming climate. Unloading of the ∼1 km-thick plateau ice cap and consequent release of pressure on the magmatic system beneath Yellowstone was not accompanied by volcanism, indicating that the magma chamber was not primed to erupt via decompression during the last deglaciation.

Idaho, Montana Wyoming↗