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Chemical Characteristics, Water Sources and Pathways, and Age Distribution of Ground Water in the Contributing Recharge Area of a Public-Supply Well near Tampa, Florida, 2002-05

In 2001, the National Water-Quality Assessment (NAWQA) Program of the U.S. Geological Survey began a series of studies on the transport of anthropogenic and natural contaminants (TANC) to public-supply wells. The main goal of the TANC program was to better understand the source, transport, and receptor factors that control contaminant movement to public-supply wells in representative aquifers of the United States. Studies were first conducted at regional scales at four of the eight TANC study areas during 2002-03 and at small (local) scales during 2003-05 in California, Nebraska, Connecticut, and Florida. In the Temple Terrace study area near Tampa, Florida, multiple chemical indicators and geochemical and ground-water flow modeling techniques were used to assess the vulnerability of a public-supply well in the karstic Upper Floridan aquifer to contamination from anthropogenic and naturally occurring contaminants. During 2003-05, water samples were collected from the public-supply well and 13 surrounding monitoring wells that all tap the Upper Floridan aquifer, and from 15 monitoring wells in the overlying surficial aquifer system and the intermediate confining unit that are located within the modeled ground-water contributing recharge area of the public-supply well. Six volatile organic compounds and four pesticides were detected in trace concentrations (well below drinking-water standards) in water from the public-supply well, which had an open interval from 36 to 53 meters below land surface. These contaminants were detected more frequently in water samples from monitoring wells in the overlying clastic surficial aquifer system than in water from monitoring wells in the Upper Floridan aquifer in the study area. Likewise, nitrate-N concentrations in the public-supply well (0.72-1.4 milligrams per liter) were more similar to median concentrations in the oxic surficial aquifer system (2.1 milligrams per liter) than to median nitrate-N concentrations in the anoxic Upper Floridan aquifer (0.06 milligram per liter) under sulfate-reducing conditions. High concentrations of radon-222 and uranium in the public-supply well compared to those in monitoring wells in the Upper Floridan aquifer appear to originate from water moving downward through sands and discontinuous clay lenses that overlie the aquifer. Water samples also were collected from three overlapping depth intervals (38-53, 43-53, and 49-53 meters below land surface) in the public-supply well. The 49- to 53-meter interval was identified as a high-flow zone during geophysical logging of the wellbore. Water samples were collected from these depth intervals at a low pumping rate by placing a low-capacity submersible pump (less than 0.02 cubic meter per minute) at the top of each interval. To represent higher pumping conditions, a large-capacity portable submersible pump (1.6 cubic meters per minute) was placed near the top of the open interval; water-chemistry samples were collected using the low-capacity submersible pump. The 49- to 53-meter depth interval had distinctly different chemistry than the other two sampled intervals. Higher concentrations of nitrate-N, atrazine, radon, trichloromethane (chloroform), and arsenic (and high arsenic (V)/arsenic (III) ratios); lower concentrations of dissolved solids, strontium, iron, manganese, and lower nitrogen and sulfur isotope ratios were found in this highly transmissive zone in the limestone than in water from the two other depth intervals. Movement of water likely occurs from the overlying sands and clays of the oxic surficial aquifer system and intermediate confining unit (that contains high radon-222 and nitrate-N concentrations) into the anoxic Upper Floridan aquifer (that contains low radon-222 and nitrate-N concentrations). Differences in arsenic concentrations in water from the various depth intervals in the public-supply well (3.2-19.0 micrograms per liter) were related to pumping conditions. The high arsenic

Scientific Investigations Report↗

Status and understanding of groundwater quality in the San Diego Drainages Hydrogeologic Province, 2004: California GAMA Priority Basin Project

Groundwater quality in the approximately 3,900-square-mile (mi 2 ) San Diego Drainages Hydrogeologic Province (hereinafter San Diego) study unit was investigated from May through July 2004 as part of the Priority Basin Project of the Groundwater Ambient Monitoring and Assessment (GAMA) Program. The study unit is located in southwestern California in the counties of San Diego, Riverside, and Orange. The GAMA Priority Basin Project is being conducted by the California State Water Resources Control Board in collaboration with the U.S. Geological Survey (USGS) and the Lawrence Livermore National Laboratory. The GAMA San Diego study was designed to provide a statistically robust assessment of untreated-groundwater quality within the primary aquifer systems. The assessment is based on water-quality and ancillary data collected by the USGS from 58 wells in 2004 and water-quality data from the California Department of Public Health (CDPH) database. The primary aquifer systems (hereinafter referred to as the primary aquifers) were defined by the depth interval of the wells listed in the California Department of Public Health (CDPH) database for the San Diego study unit. The San Diego study unit consisted of four study areas: Temecula Valley (140 mi 2 ), Warner Valley (34 mi 2 ), Alluvial Basins (166 mi 2 ), and Hard Rock (850 mi 2 ). The quality of groundwater in shallow or deep water-bearing zones may differ from that in the primary aquifers. For example, shallow groundwater may be more vulnerable to surficial contamination than groundwater in deep water-bearing zones. This study had two components: the status assessment and the understanding assessment. The first component of this study-the status assessment of the current quality of the groundwater resource-was assessed by using data from samples analyzed for volatile organic compounds (VOC), pesticides, and naturally occurring inorganic constituents, such as major ions and trace elements. The status assessment is intended to characterize the quality of groundwater resources within the primary aquifers of the San Diego study unit, not the treated drinking water delivered to consumers by water purveyors. The second component of this study-the understanding assessment-identified the natural and human factors that affect groundwater quality by evaluating land use, well construction, and geochemical conditions of the aquifer. Results from these evaluations were used to help explain the occurrence and distribution of selected constituents in the study unit. Relative-concentrations (sample concentration divided by benchmark concentration) were used as the primary metric for relating concentrations of constituents in groundwater samples to water-quality benchmarks for those constituents that have Federal and (or) California benchmarks. For organic and special-interest constituents, relative-concentrations were classified as high (> 1.0), moderate (> 0.1 and &le;1.0), and low (&le;0.1). For inorganic constituents, relative concentrations were classified as high (> 1.0), moderate (> 0.5 and &le;1.0), and low (&le;0.5). Grid-based and spatially weighted approaches were then used to evaluate the proportion of the primary aquifers (aquifer-scale proportions) with high, moderate, and low relative-concentrations for individual compounds and classes of constituents. One or more of the inorganic constituents with health-based benchmarks were high (relative to those benchmarks) in 17.6 percent of the primary aquifers in the Temecula Valley, Warner Valley, and Alluvial Basins study areas (hereinafter also collectively referred to as the Alluvial Fill study areas because they are composed of alluvial fill aquifers), and in 25.0 percent of the Hard Rock study area. Inorganic constituents with health-based benchmarks that were frequently detected at high relative-concentrations included vanadium (V), arsenic (As), and boron (B). Vanadium and As concentrations were not significantly correlated to either urban or agricultural land use indicating natural sources as the primary contributors of these constituents to groundwater. The positive correlation of B concentration to urban land-use was significant which indicates that anthropogenic activities are a contributing source of B to groundwater. The correlation of V, As and B concentrations to pH was positive, indicating that in alkaline groundwater these constituents are being desorbed from, or being inhibited from adsorbing to, particle surfaces. Inorganic constituents with aesthetic benchmarks that were detected at high relative-concentrations include manganese (Mn), iron (Fe), and total dissolved solids (TDS). In the Alluvial Fill study areas, Mn and TDS were detected at high relative-concentrations in 13.7 percent of the primary aquifers, and Fe in 6.9 percent. In the Hard Rock study area, Mn was detected at high relative-concentrations in 33.3 percent of the primary aquifers, and TDS in 16.7 percent; Fe was not detected at high relative-concentrations. Total dissolved solids concentrations were significantly correlated to agricultural land use suggesting that agricultural practices are a contributing source of TDS to groundwater. Manganese and Fe concentrations were highest in groundwater with low dissolved oxygen and pH indicating that the reductive dissolution of oxyhydroxides may be an important mechanism for the mobilization of Mn and Fe in groundwater. TDS concentrations were highest in shallow wells and in modern (< 50 yrs) groundwater which indicates anthropogenic activities as a source of TDS concentrations in groundwater. The relative-concentrations of organic constituents with health-based benchmarks were high in 3.0 percent of the primary aquifers in the Alluvial Fill study areas. A single detection in the Alluvial Basins study area of the discontinued gasoline oxygenate methyl tert-butyl ether (MTBE) was the only organic constituent detected at a high relative-concentration; high relative-concentrations of these constituents were not detected in the Hard Rock study area. Twelve of 88 VOCs and 14 of 123 pesticides and pesticide degradates analyzed in grid wells were detected. Chloroform was the only VOC detected in more than 10 percent of the grid wells. The herbicides simazine, atrazine, and prometon were each detected in greater than 10 percent of the grid wells. Perchlorate was detected in 22 percent of the grid wells sampled. The understanding assessment showed a significant correlation of trihalomethanes (THMs) and solvents to urban land-use, indicating that detections of these constituents are more likely to occur in groundwater underlying urbanized areas of the study unit. MTBE concentrations were negatively correlated to the distance from the nearest leaking underground fuel tank, indicating that point sources are the most significant contributing factor for MTBE concentrations to groundwater in the study unit. The positive correlation of THM and herbicide concentrations to modern groundwater was significant, as was the negative correlation of herbicide concentrations to pH and anoxic groundwater. The negative correlation of herbicides to pH and anoxic groundwater was likely due to the fact that these constituents were detected more frequently in shallow wells where groundwater conditions tend to be oxic with relatively low pH.

California↗

Character and Trends of Water Quality in the Blue River Basin, Kansas City Metropolitan Area, Missouri and Kansas, 1998 through 2007

Water-quality and ecological character and trends in the metropolitan Blue River Basin were evaluated from 1998 through 2007 to provide spatial and temporal resolution to factors that affect the quality of water and biota in the basin and provide a basis for assessing the efficacy of long-term combined sewer control and basin management plans. Assessments included measurements of stream discharge, pH, dissolved oxygen, specific conductance, turbidity, nutrients (dissolved and total nitrogen and phosphorus species), fecal-indicator bacteria (Escherichia coli and fecal coliform), suspended sediment, organic wastewater and pharmaceutical compounds, and sources of these compounds as well as the quality of stream biota in the basin. Because of the nature and myriad of factors that affect basin water quality, multiple strategies are needed to decrease constituent loads in streams. Strategies designed to decrease or eliminate combined sewer overflows (CSOs) would substantially reduce the annual loads of nutrients and fecal-indicator bacteria in Brush Creek, but have little effect on Blue River loadings. Nonpoint source reductions to Brush Creek could potentially have an equivalent, if not greater, effect on water quality than would CSO reductions. Nonpoint source reductions could also substantially decrease annual nutrient and bacteria loadings to the Blue River and Indian Creek. Methods designed to decrease nutrient loads originating from Blue River and Indian Creek wastewater treatment plants (WWTPs) could substantially reduce the overall nutrient load in these streams. For the main stem of the Blue River and Indian Creek, primary sources of nutrients were nonpoint source runoff and WWTPs discharges; however, the relative contribution of each source varied depending on how wet or dry the year was and the number of upstream WWTPs. On Brush Creek, approximately two-thirds of the nutrients originated from nonpoint sources and the remainder from CSOs. Nutrient assimilation processes, which reduced total nitrogen loads by approximately 13 percent and total phosphorus loads by double that amount in a 20-kilometer reach of the Blue River during three synoptic base-flow sampling events between August through September 2004 and September 2005, likely are limited to selected periods during any given year and may not substantially reduce annual nutrient loads. Bacteria densities typically increased with increasing urbanization, and bacteria loadings to the Blue River and Indian Creek were almost entirely the result of nonpoint source runoff. WWTPs contributed, on average, less than 1 percent of the bacteria to these reaches, and in areas of the Blue River that had combined sewers, CSOs contributed only minor amounts (less than 2 percent) of the total annual load in 2005. The bulk of the fecal-indicator bacteria load in Brush Creek also originated from nonpoint sources with the remainder from CSOs. From October 2002 through September 2007, estimated daily mean Escherichia coli bacteria density in upper reaches of the Blue River met the State of Missouri secondary contact criterion standard approximately 85 percent of the time. However, in lower Blue River reaches, the same threshold was exceeded approximately 45 percent of the time. The tributary with the greatest number of CSO discharge points, Brush Creek, contributed approximately 10 percent of the bacteria loads to downstream reaches. The tributary Town Fork Creek had median base-flow Escherichia coli densities that were double that of other basin sites and stormflow densities 10 times greater than those in other parts of the basin largely because approximately one-fourth of the runoff in the Town Fork Creek Basin is believed to originate in combined sewers. Genotypic source typing of bacteria indicated that more than half of the bacteria in this tributary originated from human sources with two storms contributing the bulk of all bacteria sourced as human. However, areas outsid

Scientific Investigations Report↗

California State Waters Map Series: Offshore of Santa Barbara, California

In 2007, the California Ocean Protection Council initiated the California Seafloor Mapping Program (CSMP), designed to create a comprehensive seafloor map of high-resolution bathymetry, marine benthic habitats, and geology within the 3-nautical-mile limit of California’s State Waters. The CSMP approach is to create highly detailed seafloor maps through collection, integration, interpretation, and visualization of swath sonar data, acoustic backscatter, seafloor video, seafloor photography, high-resolution seismic-reflection profiles, and bottom-sediment sampling data. The map products display seafloor morphology and character, identify potential marine benthic habitats, and illustrate both the surficial seafloor geology and shallow (to about 100 m) subsurface geology. The Offshore of Santa Barbara map area lies within the central Santa Barbara Channel region of the Southern California Bight. This geologically complex region forms a major biogeographic transition zone, separating the cold-temperate Oregonian province north of Point Conception from the warm-temperate California province to the south. The map area is in the southern part of the Western Transverse Ranges geologic province, which is north of the California Continental Borderland. Significant clockwise rotation—at least 90°—since the early Miocene has been proposed for the Western Transverse Ranges province, and geodetic studies indicate that the region is presently undergoing north-south shortening. Uplift rates (as much as 2.2 mm/yr) that are based on studies of onland marine terraces provide further evidence of significant shortening. The city of Santa Barbara, the main coastal population center in the map area, is part of a contiguous urban area that extends from Carpinteria to Goleta. This urban area was developed on the coalescing alluvial surfaces, uplifted marine terraces, and low hills that lie south of the east-west-trending Santa Ynez Mountains. Several beaches line the actively utilized Santa Barbara coastal zone, including Arroyo Burro Beach Park, Leadbetter Beach, East Beach, and “Butterfly Beach.” There are ongoing coastal erosion problems associated with both development and natural processes; between 1933–1934 and 1998, cliff erosion in the map area occurred at rates of about 0.1 to 1 m/yr, the largest amount (63 m) occurring at Arroyo Burro in the western part of the map area. In addition, development of the Santa Barbara Harbor, which began in 1928, lead to shoaling west of the harbor as the initial breakwater trapped sand, as well as to coastal erosion east of the harbor. Since 1959, annual harbor dredging has mitigated at least some of the downcoast erosion problems. The Offshore of Santa Barbara map area lies in the central part of the Santa Barbara littoral cell, which is characterized by littoral drift to the east-southeast. Drift rates have been estimated to be about 400,000 tons/yr at Santa Barbara Harbor. Sediment supply to the western and central parts of the littoral cell, including the map area, is largely from relatively small transverse coastal watersheds. Within the map area, these coastal watersheds include (from east to west) San Ysidro Creek, Oak Creek, Montecito Creek, Sycamore Creek, Mission Creek, Arroyo Burro, and Atascadero Creek. The Ventura and Santa Clara Rivers, the mouths of which are about 40 to 50 km southeast of Santa Barbara, are much larger sediment sources. Still farther east, eastward-moving sediment in the littoral cell is trapped by Hueneme and Mugu Canyons and then transported to the deep-water Santa Monica Basin. The offshore part of the map area consists of a relatively flat and shallow continental shelf, which dips gently seaward (about 0.4° to 0.8°) so that water depths at the 3-nautical-mile limit of California’s State Waters are about 45 m in the east and about 75 m in the west. This part of the Santa Barbara Channel is relatively well protected from large Pacific swells from the north and northwest by Point Conception and from the south and southwest by offshore islands and banks. The shelf is underlain by variable amounts of upper Quaternary shelf, estuarine, and fluvial sediments deposited as sea level fluctuated in the late Pleistocene. Seafloor habitats in the broad Santa Barbara Channel region consist of significant amounts of soft sediment and isolated areas of rocky habitat that support kelp-forest communities nearshore and rocky-reef communities in deep water. The potential marine benthic habitat types mapped in the Offshore of Santa Barbara map area are directly related to its Quaternary geologic history, geomorphology, and active sedimentary processes. These potential habitats, which lie within the Shelf (continental shelf) megahabitat, range from soft, unconsolidated sediment to hard sedimentary bedrock. This heterogeneous seafloor provides promising habitat for rockfish, groundfish, crabs, shrimp, and other marine benthic organisms.

California↗

Effects of urbanization on stream ecosystems along an agriculture-to-urban land-use gradient, Milwaukee to Green Bay, Wisconsin, 2003-2004

In 2003 and 2004, 30 streams near Milwaukee and Green Bay, Wisconsin, were part of a national study by the U.S. Geological Survey to assess urbanization effects on physical, chemical, and biological characteristics along an agriculture-to-urban land-use gradient. A geographic information system was used to characterize natural landscape features that define the environmental setting and the degree of urbanization within each stream watershed. A combination of land cover, socioeconomic, and infrastructure variables were integrated into a multi-metric urban intensity index, scaled from 0 to 100, and assigned to each stream site to identify a gradient of urbanization within relatively homogeneous environmental settings. The 35 variables used to develop the final urban intensity index characterized the degree of urbanization and included road infrastructure (road area and road traffic index), 100-meter riparian land cover (percentage of impervious surface, shrubland, and agriculture), watershed land cover (percentage of impervious surface, developed/urban land, shrubland, and agriculture), and 26 socioeconomic variables (U.S. Census Bureau, 2001). Characteristics examined as part of this study included: habitat, hydrology, stream temperature, water chemistry (chloride, sulfate, nutrients, dissolved and particulate organic and inorganic carbon, pesticides, and suspended sediment), benthic algae, benthic invertebrates, and fish. Semipermeable membrane devices (SPMDs) were used to assess the potential for bioconcentration of hydrophobic organic contaminants (specifically polycyclic aromatic hydrocarbons, polychlorinated biphenyls, and organochlorine and pyrethroid insecticides) in biological membranes, such as the gills of fish. Physical habitat measurements reflective of channel enlargement, including bankfull channel size and bank erosion, increased with increasing urbanization within the watershed. In this study, percentage of riffles and streambed substrate size were more strongly related to local geologic setting, slope, watershed topography, and river-engineering practices than to urbanization. Historical local river-engineering features such as channelization, bank stabilization, and grade controls may have confounded relations among habitat characteristics and urbanization. A number of hydrologic-condition metrics (including flashiness and duration of high flow during pre- or post-ice periods) showed strong relations to the urban intensity index. Hydrologic-condition metrics cannot be used alone to predict habitat or geomorphic change. Chloride and SPMD measures of potential toxicity and polycyclic aromatic hydrocarbon concentrations showed the strongest positive correlations to urbanization including increases in road infrastructure, percentage of impervious surface in the watershed, urban land cover, and land-distribution related to urban land cover. This suggests that automobiles and the infrastructure required to support automobiles are a significant source of these compounds in this study area. Chloride in spring and summer showed a significant positive correlation with the urban intensity index; concentrations increased with increasing road infrastructure, urban land cover, and a number of landscape variables related to urbanization. Spring concentrations of sulfate, prometon, and diazinon correlated to fewer urban characteristics than chloride, including increases in road infrastructure, percentage of impervious surface, and urban land cover. Changes in biological communities correlated to the urban intensity index or individual urban-associated variables. Decreased percentages of pollution-sensitive diatoms and diatoms requiring high dissolved-oxygen saturation correlated to increases in the percentage of developed urban land, total impervious surface, stream flashiness, population density, road-area density, and decreases in the percentage of wetland in the watershed. Invertebrate taxa richness and Coleop

Scientific Investigations Report↗

Flood-frequency estimation for very low annual exceedance probabilities using historical, paleoflood, and regional information with consideration of nonstationarity

Streamflow estimates for floods with an annual exceedance probability of 0.001 or lower are needed to accurately portray risks to critical infrastructure, such as nuclear powerplants and large dams. However, extrapolating flood-frequency curves developed from at-site systematic streamflow records to very low annual exceedance probabilities (less than 0.001) results in large uncertainties in the streamflow estimates. Traditionally, methods for statistically estimating flood frequency have relied on the systematic streamflow record, which provides a time series of annual maximum flood peaks, often including some historical peaks. However, most peak-flow records are less than 100 years, and uncertainties are large when trying to extrapolate magnitudes of very low annual exceedance probability events. Other data may be available that extend the record beyond the systematic dataset. Historical data are defined as data from outside the period of systematic records but within the period of human records. Examples of historical information include flood estimates from other agencies and newspaper accounts that can be translated to flood magnitude point estimates, interval estimates, or perception thresholds (such as a statement that an 1880 flood was the largest since 1869). Paleoflood data, which may also extend the dataset, include a broad range of information about flood occurrence or magnitude from sources like sediment deposits or tree rings. Several assumptions are made in flood-frequency analysis, and an understanding of whether the data conform to these assumptions is desired. A particularly difficult assumption to evaluate for flood-frequency analysis is the underlying assumption that the flood series is stationary—the assumption that a time series of peak flow varies around a constant mean within a particular range of values (constant variance). As the hydrologic community’s understanding of natural systems and anthropogenic effects on streamflows has evolved, the community has come to understand that many surface-water systems exhibit one or more forms of nonstationarity, and thus the stationarity assumption is often violated to some degree. However, there is currently (2020) no consensus among hydrologists regarding the most appropriate flood-frequency-analysis methods for nonstationary systems, and this topic remains an active area of research. A literature review was completed to summarize the state of the science of flood frequency. The literature review highlights tools available to detect nonstationarities and identifies approaches that include external information to inform flood-frequency analysis. To demonstrate methods for initial data analysis and for incorporating historical and paleoflood information in flood-frequency analysis, five sites were selected: the Red River of the North at James Avenue Pumping Station, Winnipeg, Manitoba, Canada; lower reach, Rapid Creek, South Dakota; Spring Creek, South Dakota; Cherry Creek near Melvin, Colorado; and Escalante River near Escalante, Utah. The sites were chosen for the availability of published historical and paleoflood data and for their geographic diversity and unique characteristics, which highlighted issues such as autocorrelation, change points, trends, outlier peaks, or short periods of record. An initial data analysis that involved examining records for autocorrelation, change points, and trends was completed for all sites. The flood-frequency analysis completed for this study used version 7.2 of the U.S. Geological Survey PeakFQ program. Multiple analyses were done on each site documenting the change in the flood-frequency curve when additional historical or paleoflood data were added. When other flood-frequency studies were available, their results were compared to the results here. The comparisons in some cases simply show the effect of additional years of data, whereas other comparisons show results from probability distributions or fitting methods other than those used in PeakFQ. For the Red River of the North, flood-frequency analysis shows that paleoflood data appear necessary to reasonably estimate very low annual exceedance probabilities. For the analysis of the lower reach of Rapid Creek and Spring Creek, paleoflood information helped put a high outlier from the systematic period in context; however, very low annual exceedance probabilities at these sites still had extraordinarily large confidence bounds. These sites also showed that paleoflood information might be transferred from one site to another, with the caveat that this is a case where we had existing paleoflood data to test the transfer of paleoflood information—this is not the case at many sites, and transferring paleoflood information requires assumptions about the comparability of floods at the sites. The Cherry Creek analysis affirmed the result of an earlier study that showed that the generalized Pareto distribution was not a good distribution for estimating very low annual exceedance probabilities. The Escalante River analysis showed that adding paleoflood information might increase uncertainty for very low annual exceedance probabilities, compared to analysis with the systematic period of record information only, when the paleoflood peaks are of much larger magnitudes than the systematic record.

Scientific Investigations Report↗

Trends in streamflow and precipitation for selected sites in the Elkhorn River Basin and in streamflow in the Salt Creek and Platte River Basins, Nebraska, 1961–2011

To better understand the streamflow trends at the streamgages in the Elkhorn River Basin in Nebraska, the U.S. Geological Survey (USGS) in cooperation with the Lower Elkhorn Natural Resources District further investigated streamflow trends at the eight streamgages on the Elkhorn River, Salt Creek, and the Lower Platte River that indicated a positive trend in streamflow characteristics and analyzed precipitation trends in the four basins upstream from the Elkhorn River Basin streamgages. An analysis of four streamgages in the Elkhorn River Basin, one streamgage in Salt Creek Basin, and three streamgages in the Lower Platte River Basin that had previously indicated trends in selected annual mean streamflow, annual low flows, fall low flows, and growing season monthly mean streamflows metrics were analyzed for the period from 1961 to 2011. A streamgage in the Upper Elkhorn River Basin (Elkhorn River at Neligh, Nebraska [USGS station 06798500; maintained by USGS from water years 1930 to 1993, maintained by Nebraska Department of Natural Resources from water years 1994 to 2019]) had significant positive trends in annual mean streamflow and insignificant trends for other streamflow metrics whereas the lower three sites (Logan Creek near Uehling, Nebr. [USGS station 06799500]; Maple Creek at Nickerson, Nebr. [USGS station 06800000]; and Elkhorn River at Waterloo, Nebr. [USGS station 06800500]) had significant positive trends for annual mean streamflow, for all durations of the annual low-flow periods (1-day, 2-day, 3-day, 7-day, 14-day, 30-day, 60-day, 90-day, and 183-day periods), for all durations of the low-flow periods in October–November (1-day, 2-day, 3-day, 7-day, 14-day, 30-day, and 60-day periods), and for monthly mean streamflow for July, August, and September. Upstream from the confluence of the Elkhorn River and the Platte River, the Platte River at North Bend, Nebr. (USGS station 06796000), streamgage indicated insignificant trends for most streamflow metrics. A streamgage in the Salt Creek Basin (Salt Creek at Greenwood, Nebr. [USGS station 06803555]) also indicated positive trends in some low-flows metrics. Streamflow at the Platte River at Louisville, Nebr. (USGS station 06805500), streamgage, downstream from the Salt Creek and Elkhorn River inflows, indicated significant positive trends in most annual and all October–November low flows and August mean streamflow but insignificant trends in annual mean streamflow and June, July, and September monthly mean streamflows. Streamflow records for the Platte River near Duncan, Nebr. (USGS station 06774000), streamgage only indicated a significant trend in the August mean streamflow; no other metrics had significant trends at the streamgage. The trend analyses are sensitive to the period that is analyzed for trends. Sites with the most significant trends for low-flow metrics for the period 1961–2011 have fewer significant trends for low-flow metrics for the period after 1980–2011. The results indicate that positive trends in low flows at the Salt Creek and Elkhorn River streamgages may be contributing to positive trends in low flows for the Platte River at Louisville, Nebr., streamgage. Likewise, streamflow in the Salt Creek and Elkhorn River Basins may be contributing to the positive trend in August mean streamflow for the Platte River at Louisville, Nebr., streamgage, three lower Elkhorn River streamgages, and the Salt Creek streamgage. Precipitation was also examined as a primary cause for streamflow trends in the Elkhorn River Basin. For the four streamgages in the Elkhorn River Basin, relations between precipitation and streamflow were examined on an annual and monthly basis using linear regression. In general, the goodness of fit for the linear relations was poor with coefficient of determination values of less than or equal to 0.10 for four of the eight relations. Only one significant increase in annual precipitation upstream from the four streamgages and the frequent detection of significant increases in streamflow after removing the effect of precipitation indicate that other factors besides precipitation may have played a role in the significant positive trends in low-flow periods in the lower Elkhorn River and its tributaries.

Nebraska↗

Groundwater discharge characteristics for selected streams within the Loup River Basin, Nebraska, 2014–16

Streams in the Loup River Basin are sensitive to groundwater withdrawals because of the close hydrologic connection between groundwater and surface water. Groundwater discharge is the primary component of streamflow in the Loup River Basin and constitutes more than 90 percent of streamflow in the central part of the Sand Hills. To improve the understanding of geologic controls and various climatic and land-use changes on groundwater discharge, the U.S. Geological Survey (USGS), in cooperation with the Upper Loup Natural Resources District (NRD), the Lower Loup NRD, and the Nebraska Environmental Trust, studied the spatial and temporal characteristics of groundwater discharge within the Loup River Basin. This report documents the methods of data collection and analysis, which include the collection of approximately 350 river miles of aerial thermal infrared imagery and continuous groundwater-level and temperature data from six streamflow-gaging stations within the Loup River Basin. The results from the stream reconnaissance and examination of aerial thermal infrared imagery demonstrated the influence of the surficial and subsurface geology on the spatial characteristics of groundwater discharge to streams in the Loup River Basin. At the headwaters of the South Loup River, streamflow is sustained and increased from focused groundwater discharge emanating from Quaternary deposits at many small (less than 0.1 cubic foot per second) focused points. The volume of water produced from this dense network of focused groundwater discharge points along the North Fork South Loup River is sufficient to provide approximately 40 percent of the flow measured at the South Loup River at Arnold, Nebraska streamflow-gaging station (USGS station 06781600) during the irrigation season. Approximately 5 miles downstream from the South Loup River at Arnold, Nebr., streamflow-gaging station, the river incises into Pliocene-age sand and gravel deposits, which provide additional groundwater discharge to the stream. The streamflow of the South Loup River increases by a factor of 5 across a 62-mile reach of the middle South Loup River. Increases in streamflow along the upper Dismal River result from a dense network of focused groundwater discharge points within semiconsolidated Pliocene-age deposits. Below the Dismal River near Thedford, Nebr., streamflow-gaging station (USGS station 06775900), the Dismal River incises into the Ogallala Formation over a short reach before flowing over coarser, more permeable Quaternary-age alluvial deposits. Diffuse groundwater discharge sustains and increases the streamflow of the lower Dismal River in this reach. Groundwater sapping was evident on some stream reaches and has increased the size and flow of focused groundwater discharge points. Previous researchers have documented streambed incision and groundwater sapping on the upper Dismal River that have created and enlarged focused groundwater discharge points capturing additional groundwater. Similar processes appear to have played a role in the formation of larger focused groundwater discharge points, which sustain the flow of the middle South Loup River. The constant flow of groundwater into the South Loup River has removed finer-grained Quaternary sediments and further exposed Pliocene-age gravel deposits. Headward erosion is evident where some of the large focused groundwater discharge points have incised their own draws and terminate in bowl-like depressions away from the stream. Within the Loup River NRDs, the percentage of groundwater-irrigated land in a stream basin is one factor that affects groundwater discharge to streams. A striking example was at the South Loup River at Saint Michael, Nebr., groundwater and streamflow-gaging station (USGS station 06784000) where the shallow groundwater levels declined below the level of the stream during the middle to late part of the growing season (July to September) when consumptive groundwater use was at its peak. The South Loup River Basin above the South Loup River at Saint Michael, Nebr., streamflow-gaging station has the highest percentage of groundwater-irrigated row crops of all the basins examined in this study. Continuous groundwater and surface-water levels measured at the North Loup River at the Taylor, Nebr., streamflow-gaging station (USGS station 06786000) indicate that the stream is receiving groundwater throughout the year; however, when consumptive groundwater use peaks during the middle to late part of the growing season (July to September), the difference in elevation between the groundwater level and the stream elevation decreases, which indicates a reduction in the amount of groundwater discharge received.

Nebraska↗

Ground-Water Quality of the Northern High Plains Aquifer, 1997, 2002-04

An assessment of ground-water quality in the northern High Plains aquifer was completed during 1997 and 2002-04. Ground-water samples were collected at 192 low-capacity, primarily domestic wells in four major hydrogeologic units of the northern High Plains aquifer-Ogallala Formation, Eastern Nebraska, Sand Hills, and Platte River Valley. Each well was sampled once, and water samples were analyzed for physical properties and concentrations of nitrogen and phosphorus compounds, pesticides and pesticide degradates, dissolved solids, major ions, trace elements, dissolved organic carbon (DOC), radon, and volatile organic compounds (VOCs). Tritium and microbiology were analyzed at selected sites. The results of this assessment were used to determine the current water-quality conditions in this subregion of the High Plains aquifer and to relate ground-water quality to natural and human factors affecting water quality. Water-quality analyses indicated that water samples rarely exceeded established U.S. Environmental Protection Agency public drinking-water standards for those constituents sampled; 13 of the constituents measured or analyzed exceeded their respective standards in at least one sample. The constituents that most often failed to meet drinking-water standards were dissolved solids (13 percent of samples exceeded the U.S. Environmental Protection Agency Secondary Drinking-Water Regulation) and arsenic (8 percent of samples exceeded the U.S. Environmental Protection Agency Maximum Contaminant Level). Nitrate, uranium, iron, and manganese concentrations were larger than drinking-water standards in 6 percent of the samples. Ground-water chemistry varied among hydrogeologic units. Wells sampled in the Platte River Valley and Eastern Nebraska units exceeded water-quality standards more often than the Ogallala Formation and Sand Hills units. Thirty-one percent of the samples collected in the Platte River Valley unit had nitrate concentrations greater than the standard, 22 percent exceeded the manganese standard, 19 percent exceeded the sulfate standard, 26 percent exceeded the uranium standard, and 38 percent exceeded the dissolved-solids standard. In addition, 78 percent of samples had at least one detectable pesticide and 22 percent of samples had at least one detectable VOC. In the Eastern Nebraska unit, 30 percent of the samples collected had dissolved-solids concentrations larger than the standard, 23 percent exceeded the iron standard, 13 percent exceeded the manganese standard, 10 percent exceeded the arsenic standard, 7 percent exceeded the sulfate standard, 7 percent exceeded the uranium standard, and 7 percent exceeded the selenium standard. No samples exceeded the nitrate standard. Thirty percent of samples had at least one detectable pesticide compound and 10 percent of samples had at least one detectable VOC. In contrast, the Sand Hills and Ogallala Formation units had fewer detections of anthropogenic compounds and drinking-water exceedances. In the Sand Hills unit, 15 percent of the samples exceeded the arsenic standard, 4 percent exceeded the nitrate standard, 4 percent exceeded the uranium standard, 4 percent exceeded the iron standard, and 4 percent exceeded the dissolved-solids standard. Fifteen percent of samples had at least one pesticide compound detected and 4 percent had at least one VOC detected. In the Ogallala Formation unit, 6 percent of water samples exceeded the arsenic standard, 4 percent exceeded the dissolved-solids standard, 3 percent exceeded the nitrate standard, 2 percent exceeded the manganese standard, 1 percent exceeded the iron standard, 1 percent exceeded the sulfate standard, and 1 percent exceeded the uranium standard. Eight percent of samples collected in the Ogallala Formation unit had at least one pesticide detected and 6 percent had at least one VOC detected. Differences in ground-water chemistry among the hydrogeologic units were attributed to variable depth to water, depth of the well screen below the water table, reduction-oxidation conditions, ground-water residence time, interactions with surface water, composition of aquifer sediments, extent of cropland, extent of irrigated land, and fertilizer application rates.

Scientific Investigations Report↗

Uranium concentrations in groundwater, northeastern Washington

A study of uranium in groundwater in northeastern Washington was conducted to make a preliminary assessment of naturally occurring uranium in groundwater relying on existing information and limited reconnaissance sampling. Naturally occurring uranium is associated with granitic and metasedimentary rocks, as well as younger sedimentary deposits, that occur in this region. The occurrence and distribution of uranium in groundwater is poorly understood. U.S. Environmental Protection Agency (EPA) regulates uranium in Group A community water systems at a maximum contaminant level (MCL) of 30 μg/L in order to reduce uranium exposure, protect from toxic kidney effects of uranium, and reduce the risk of cancer. However, most existing private wells in the study area, generally for single family use, have not been sampled for uranium. This document presents available uranium concentration data from throughout a multi-county region, identifies data gaps, and suggests further study aimed at understanding the occurrence of uranium in groundwater. The study encompasses about 13,000 square miles (mi 2 ) in the northeastern part of Washington with a 2010 population of about 563,000. Other than the City of Spokane, most of the study area is rural with small towns interspersed throughout the region. The study area also includes three Indian Reservations with small towns and scattered population. The area has a history of uranium exploration and mining, with two inactive uranium mines on the Spokane Indian Reservation and one smaller inactive mine on the outskirts of Spokane. Historical (1977–2016) uranium in groundwater concentration data were used to describe and illustrate the general occurrence and distribution of uranium in groundwater, as well as to identify data deficiencies. Uranium concentrations were detected at greater than 1 microgram per liter (μg/L) in 60 percent of the 2,382 historical samples (from wells and springs). Uranium concentrations ranged from less than 1 to 88,600 μg/L, and the median concentration of uranium in groundwater for all sites was 1.4 μg/L. New (2017) uranium in groundwater concentration data were obtained by sampling 13 private domestic wells for uranium in areas without recent (2000s) water-quality data. Uranium was detected in all 13 wells sampled for this study; concentrations ranged from 1.03 to 1,180 μg/L with a median of 22 μg/L. Uranium concentrations of groundwater samples from 6 of the 13 wells exceeded the MCL for uranium. Uranium concentrations in water samples from two wells were 1,130 and 1,180 μg/L, respectively; nearly 40 times the MCL. Additional data collection and analysis are needed in rural areas where self-supplied groundwater withdrawals are the primary source of water for human consumption. Of the roughly 43,000 existing water wells in the study area, only 1,755 wells, as summarized in this document, have available uranium concentration data, and some of those data are decades old. Furthermore, analysis of area groundwater quality would benefit from a more extensive chemical-analysis suite including general chemistry in order to better understand local geochemical conditions that largely govern the mobility of uranium. Although the focus of the present study is uranium, it also is important to recognize that there are other radionuclides of concern that may be present in area groundwater.

Washington↗

Effects of huisache removal on rangeland evapotranspiration in Victoria County, south-central Texas, 2015–18

The U.S. Geological Survey and Desert Research Institute, in cooperation with the Natural Resources Conservation Service, Texas State Soil and Water Conservation Board, Victoria County Groundwater Conservation District, Victoria Soil and Water Conservation District, and the San Antonio River Authority, evaluated the hydrologic effects of Vachellia farnesiana var. farnesiana (huisache) removal on rangeland evapotranspiration in Victoria County, Texas. Measurements of evapotranspiration, rainfall, and related properties were made at two sites during March 2015 through August 2018. One site was predominantly grassland. The other site was dominated by dense huisache vegetation that was removed about halfway through the study period. The resulting evapotranspiration data were examined for differences between the locations and differences between the pre-removal (2015–16) and post-removal (2017–18) periods to assess the effects of huisache removal on evapotranspiration. Evapotranspiration measurements were made using the eddy-covariance technique and were supplemented by remote-sensing estimates of evapotranspiration derived from thermal and optical satellite images. A map of remotely sensed evapotranspiration was generated for the area surrounding the study sites for 2015 and demonstrates the capability of remote sensing to evaluate land-management effects on evapotranspiration for larger scale areas, such as a county or stream-basin area. During the pre-removal period (March 2015–December 2016), evapotranspiration was greater at the huisache site than at the grassland site. Evapotranspiration at the grassland site (average of the eddy-covariance evapotranspiration and average remotely sensed evapotranspiration) was 87.6 millimeters per month (mm/mo) and at the huisache site was 100.8 mm/mo, with the differences in evapotranspiration rates being attributed to the difference in site vegetation. After huisache was removed in January 2017, evapotranspiration at the huisache site was substantially lower than at the grassland site, the changes in evapotranspiration rates being attributed not only to removal of huisache vegetation but also to possible disruption of soil runoff and infiltration characteristics. During the post-removal period (February 2017–August 2018), evapotranspiration was 88.5 mm/mo at the grassland site and 72.9 mm/mo at the huisache site (average of the eddy-covariance and average remotely sensed evapotranspiration). The monthly differences in evapotranspiration between the grassland and huisache sites, determined by eddy-covariance and remote-sensing methods, were statistically significant between the pre-removal and post-removal periods. Also, the pre-removal period provided the best conditions to evaluate the differences between huisache site and grassland site evapotranspiration. During the pre-removal period, evapotranspiration from the huisache site as measured by the eddy-covariance method was, on average, 10.7 mm/mo greater than evapotranspiration measured at the grassland site. As determined by the average of the remotely sensed methods, huisache site evapotranspiration was 15.8 mm/mo greater than grassland site evapotranspiration. These average differences in evapotranspiration rates by the two methods indicate that evapotranspiration at the grassland site was, on average, 13.2 mm/mo less than that at the huisache site during the pre-removal period. This average difference in evapotranspiration rates also indicates potential increased groundwater recharge and (or) surface-water runoff at the grassland site.

Texas↗

The coral reef of South Moloka'i, Hawai'i— Portrait of a sediment-threatened fringing reef

Moloka‘i, with the most extensive coral reef in the main Hawaiian Islands, is especially sacred to Hina, the Goddess of the Moon. As Hinaalo, she is the Mother of the Hawaiian people; as Hinapuku‘a, she is the Goddess of Fishermen; and in the form Hina‘opuhalako‘a, she is the Goddess who gave birth to coral, coral reefs, and all spiny marine organisms. Interdependence between the reef’s living resources, the people, and their cosmology was the basis for management of Moloka‘i’s coastal waters for over a thousand years. The ancient residents of Moloka‘i built the greatest concentration of fishponds known anywhere, but their mastery of mariculture, something needed now more than ever, was lost after near genocide from exotic Western diseases. Subsequent destruction of the native vegetation for exotic cattle, goats, pigs, sugar cane, and pineapple caused soil erosion and sedimentation on the reef flat. This masterful volume clearly documents that soil washing into the sea is the major threat to the reef today. Abandoned fishponds, choked with sediment, now act as barriers and mud traps, making damage to corals less than it would otherwise would have been. The role of mud and freshwater from land in preventing coral reef growth, clearly articulated in Charles Darwin’s first book, The Structure and Distribution of Coral Reefs, is the major theme of this book. All around the tropics, coral reefs have died from huge increases in terrestrial sedimentation that resulted from destruction of hillside forests for cash-crop agriculture and pastures in the colonial era, especially in Latin America, Asia, and the islands of the Caribbean and Indo-Pacific. It is obvious that one cannot manage the coastal zone as a unit separate from the watersheds that drain into it. Yet there has been surprisingly little comprehensive scientific study of these impacts. In this landmark volume, U.S. Geological Survey researchers and their colleagues have developed and applied a remarkably integrated approach to the reefs of Moloka‘i, combining geology, oceanography, and biology to provide an in-depth understanding of the processes that have made these reefs grow and that now limit them. They have joined old fashioned natural history of marine animals and plants with study of the geological evolution of the island, hydrology, meteorology, and land-use history, to an arsenal of new methods of remote sensing, including aerial photography, laser ranging, infrared thermal mapping, seismic reflection, in-situ instrumentation to measure chemical parameters of water quality, and direct measurements of the physical driving forces affecting them—such as wave energy, currents, sedimentation, and sediment transport. They provide a level of documentation and insight that has never been available for any reef before. A remarkable feature of this book is that it is aimed at the people of Moloka‘i to inform them of what is happening to their reef and what they might do to preserve their vital resources. The scientific data and interpretations are expressed in unusually clear and comprehensible language, free of the professional jargon that makes most technical publications impenetrable to the public that most needs to know about them, yet without loss of scientific rigor. Here readers will see clearly explained the whole path of soil loss, from the impacts of wild pigs and goats at higher elevations, deforestation of the hills for cattle pasture at lower levels, and denudation of low lands for cash crops. The resulting biological impoverishment has bared the soils, which wash away in flash storms, smothering the inshore reefs, whose growth was already limited because they had grown right up to sea level. The data in this book show that the mud doesn’t get far if it is washed into the sea during a big storm with heavy waves. Afterwards this mud keeps getting stirred up by every succeeding storm, spreading and affecting corals over wider areas until it is finally washed out of the system—and that only happens if there is no more new mud washing onto the reef. I saw this myself a few years ago in Pila‘a Bay on Kaua‘i, where a bulldozed hillside of abandoned sugar cane fields had slumped right on top of a coral reef following exceptional rains. Years later, the algae species were zoned in a way that clearly mapped the distribution of nutrients washed into the bay, most likely from fertilizers bound to the eroded soils. That pattern closely mimics, on a small scale, that shown in Moloka‘i in this volume, where the inner reef is covered with algae, zoned by species in a way that points to land-based sources of nutrients, while the outermost reef slope is still coral dominated, and the deep algae seem to indicate deep-water nutrient upwelling. What of the future? The Hawaiian Islands have been exceptionally fortunate to be spared the worst coral heatstroke death from high temperatures, at least to date. So far, the worst global warming impacts have luckily been small in this region, and the small number of people on Moloka‘i has kept population densities, and sewage pollution, low compared to the more developed islands. Nutrients from years of sugar and pineapple fertilization, and the washing of this soil onto the reefs, show clear influences on the pattern of algae on the reef. Even at very low levels of nutrients, well below that which drives algae to smother and kill coral reefs, more algae is present. Soil erosion control is therefore the key to better management of both nutrients and turbidity on Moloka‘i reefs. To that end land management actions mentioned in this book, such as suppressing wild fires and eliminating wild goats and pigs, could be made even more effective if supplemented by active erosion control using plants whose roots bind the soil effectively in place. Through all of these efforts, Hina and the people of Moloka‘i could be happy again!

Hawaii↗

Hydrogeology and shallow groundwater quality in the tidal Anacostia River watershed, Washington, D.C.

Groundwater hydrology and geochemistry within the tidal Anacostia River watershed of Washington, D.C. are related to natural and human influences. The U.S. Geological Survey, in cooperation with the District Department of Energy & Environment, began investigating the hydrogeology and groundwater quality of the watershed in 2002. Lithologic coring, groundwater-level and tidal monitoring, and water-quality sampling have been conducted to improve understanding of the groundwater-flow system, geochemistry, water quality, and the likely interaction between groundwater and the tidal Anacostia River. The flow and interaction of shallow groundwater with the tidal Anacostia River and other area streams are affected by diversions, pumping, land reclamation, and other human activities in this highly urbanized watershed. The tidal Anacostia River watershed is underlain by a wedge of unconsolidated sediments that is part of the Atlantic Coastal Plain Physiographic Province. These sediments form a system of confined and unconfined aquifers. The coarse sediments of the Potomac Group sand-dominated lithofacies form the Patuxent aquifer. The Patuxent aquifer crops out and subcrops in the northwestern part of the study area, but is confined to the southeast by the overlying Potomac Group clay-dominated lithofacies. Overlying the Potomac Group is a series of interbedded sands and clays that form an unconfined surficial aquifer system. Regional correlation in the unconfined surficial aquifer system is complicated by local heterogeneity in aquifer sediments. Local perched and semi-confined conditions occur in some areas. Recharge of the confined Patuxent aquifer occurs primarily in the outcrop and subcrop area, although some recharge may also occur through overlying confining units. Recharge to the unconfined surficial aquifer system occurs through infiltration of precipitation and possible artificial recharge from structures such as underground water or sewer pipes. In the Patuxent aquifer, hydraulic gradients indicate downward movement in the outcrop area, whereas hydraulic heads beneath the Anacostia River are higher than land surface, indicating an upward hydraulic gradient. In the unconfined surficial aquifer system, groundwater generally flows from upland recharge areas towards discharge areas near the Anacostia River and its tributaries. Groundwater from the confined part of the Patuxent aquifer also may discharge to the Anacostia River in locations where the overlying clay-dominated lithofacies of the Potomac Group is absent as a result of past geologic and (or) alluvial processes. Geochemistry and groundwater quality are affected by hydrologic conditions as well as anthropogenic influences. Local variability in groundwater quality reflects local variability in hydrogeologic conditions and sources of chemicals. Groundwater ranges from anoxic and iron- or calcium-bicarbonate type, to oxic with elevated nitrate. The occurrence and distribution of pesticides, volatile organic compounds, and other selected chemical compounds in groundwater reflect the multitude of sources common to urban areas, as well as variable hydrogeologic and geochemical conditions that affect their fate and transport in the environment. Overall, concentrations of only a few of the over 200 chemical constituents included in laboratory analyses exceeded regulatory standards or guidance values. These include tetrachloroethene and arsenic, which were each detected one time in different wells. There were also several detections of iron and manganese that exceeded regulatory standards or guidance values that are associated with reducing conditions in aquifer sediments.

Washington, D.C.↗

Simulation of groundwater flow, 1895–2010, and effects of additional groundwater withdrawals on future stream base flow in the Elkhorn and Loup River Basins, central Nebraska—Phase three

The U.S. Geological Survey, in cooperation with the Lewis and Clark, Lower Elkhorn, Lower Loup, Lower Platte North, Lower Niobrara, Middle Niobrara, Upper Elkhorn, and the Upper Loup Natural Resources Districts, designed a study to refine the spatial and temporal discretization of a previously modeled area. This updated study focused on a 30,000-square-mile area of the High Plains aquifer and constructed regional groundwater-flow models to evaluate the effects of groundwater withdrawal on stream base flow in the Elkhorn and Loup River Basins, Nebraska. The model was calibrated to match groundwater-level and base-flow data from the stream-aquifer system from pre-1940 through 2010 (including predevelopment [pre-1895], early development [1895–1940], and historical development [1940 through 2010] conditions) using an automated parameter-estimation method. The calibrated model then was used to simulate hypothetical development conditions (2011 through 2060). Predicted changes to stream base flow based on simulated changes to groundwater withdrawal will aid in developing strategies for management of hydrologically connected water supplies. Additional wells were simulated throughout the model domain and pumped for 50 years to assess the effect of wells on aquifer depletions, including stream base flow. The percentage of withdrawal for each well after 50 years, which was compensated by aquifer reductions to stream base flow, storage, or evapotranspiration, was computed and mapped. These depletions are influenced by aquifer properties, time, and distance from the well. Stream base-flow depletion results showed that the closer the added well was to a stream, the greatest the effect on the stream base flow. Areas of stream base-flow depletion percentages greater than 80 percent were generally within 1 mile (mi) from the stream. The distance increased to 6 mi near the confluence of the Dismal and Middle Loup Rivers, and the North Loup and Calamus Rivers. The percentage of stream base-flow depletion decreased as the distance from the stream increased. Areas more than 10 mi from the stream generally had a stream base-flow depletion of 10 percent or less. Evapotranspiration depletion was largest in areas closest to streams, specifically in the Elkhorn River watershed. It was also larger in areas of interdunal wetlands within the Sand Hills. Evapotranspiration depletion was negligible in areas greater than 5 mi from a stream, with the exception of interdunal areas in Cherry, Grant, and Arthur Counties. The storage depletion percentage increased as the distance from a stream increased. Storage depletion was largest in areas between streams. Areas experiencing the smallest amount of storage depletion were adjacent to streams. Calibrated model outputs and streamflow depletion analysis are publicly available online. Accuracy of the simulations is affected by input data limitations, system simplifications, assumptions, and resources available at the time of the simulation construction and calibration. Most of the important limitations relate either to data used as simulation inputs or to data used to estimate simulation inputs. Development of the regional simulations focused on generalized hydrogeologic characteristics within the study area and did not attempt to describe variations important to local-scale conditions. These simulations are most appropriate for analyzing groundwater-management scenarios for large areas and during long periods and are not suitable for analysis of small areas or short periods.

Nebraska↗

Plankton communities and summertime declines in algal abundance associated with low dissolved oxygen in the Tualatin River, Oregon

Phytoplankton populations in the Tualatin River in northwestern Oregon are an important component of the dissolved oxygen (DO) budget of the river and are critical for maintaining DO levels in summer. During the low-flow summer period, sufficient nutrients and a long residence time typically combine with ample sunshine and warm water to fuel blooms of cryptophyte algae, diatoms, green and blue-green algae in the low-gradient, slow-moving reservoir reach of the lower river. Algae in the Tualatin River generally drift with the water rather than attach to the river bottom as a result of moderate water depths, slightly elevated turbidity caused by suspended colloidal material, and dominance of silty substrates. Growth of algae occurs as if on a “conveyor belt” of streamflow, a dynamic system that is continually refreshed with inflowing water. Transit through the system can take as long as 2 weeks during the summer low-flow period. Photosynthetic production of DO during algal blooms is important in offsetting oxygen consumption at the sediment-water interface caused by the decomposition of organic matter from primarily terrestrial sources, and the absence of photosynthesis can lead to low DO concentrations that can harm aquatic life. The periods with the lowest DO concentrations in recent years (since 2003) typically occur in August following a decline in algal abundance and activity, when DO concentrations often decrease to less than State standards for extended periods (nearly 80 days). Since 2003, algal populations have tended to be smaller and algal blooms have terminated earlier compared to conditions in the 1990s, leading to more frequent declines in DO to levels that do not meet State standards. This study was developed to document the current abundance and species composition of phytoplankton in the Tualatin River, identify the possible causes of the general decline in algae, and evaluate hypotheses to explain why algal blooms diminish in midsummer. Plankton and water-quality sample data from 2006 to 2008 were combined with parts of a larger discrete-sample and continuous water-quality monitoring dataset and examined to identify patterns in water-quality and algal conditions since 1991, with a particular emphasis on 2003–08. Longitudinal plankton surveys were conducted in 2006–08 at six sites between river miles (RM) 24.5 and 3.4 at 2- to 3-week intervals, or 5–6 per season, and in-situ bioassay experiments were conducted in 2008 to examine the potential effects of wastewater treatment facility (WWTF) effluent and phosphorus additions on phytoplankton biomass and algal photosynthesis. Phytoplankton and zooplankton community composition, streamflow, and water-quality data were analyzed using multivariate statistical techniques to gain insights into plankton dynamics to determine what factors might be most tied to the abundance and characteristics of the phytoplankton assemblages, and identify possible causes of their declines. The connection between low-DO events and algal declines was clearly evident, as bloom crashes were nearly always followed by periods of low DO. Algal blooms occurred each year during 2006–08, producing maximum chlorophyll-a (Chl-a) values in June or July generally in the range of 50–80 micrograms per liter (µg/L). Bloom crashes and absence of sufficient algal photosynthesis in mid- to late-summer contributed to minimum DO concentrations that were less than the State standard of 6.5 milligrams per liter (mg/L) based on the 30-day mean daily concentration, for 62–74 days each year. At times, the absolute minimum State standard (4 mg/L DO) also was not met. To learn more about why low-DO events occurred, specific algal declines during 2003–08 were scrutinized to determine their likely causal factors. From this information, a series of hypotheses were formulated and evaluated in terms of their ability to explain recent declines in algal populations in the river in late summer. Meteorological, streamflow, turbidity, water temperature, and conductance conditions in the Tualatin River during the 2006–08 summer seasons were not atypical. Natural flow comprised the majority (70–80 percent) of flow each year during spring, but then reduced to 38–40 percent during midsummer when WWTF effluent—which contributed as much as 36 percent—and flow augmentation releases comprised a greater fraction of the flow. Summer 2008 was unusual, however, in the prolonged influence from the Wapato Lake agricultural area near Gaston in the upper part of the basin. The previous winter flooding and levee breach at Wapato Lake caused a much greater area of inundation. As a result, drainage from this area continued into July, much later than normal. A subsequent algal bloom in Wapato Lake then seeded the upper Tualatin River, and this drainage had a profound effect on the downstream plankton community. A large blue-green algae bloom developed—the largest in recent memory—prompting a public health advisory for recreational contact for about two weeks. Algal growths and surface blooms are a common feature of the Tualatin River. Most of the dominant algae have growth forms and morphologies that are well suited for planktonic life, employing spines and gas vacuoles to resist settling, forming colonies, and producing mucilage (or toxins) to resist zooplankton grazing. In 2006–08, 143 algal taxa were identified in 117 main-stem samples; diatoms and green algae were more diverse than blue-green, golden, and cryptophyte algae, although these later groups sometimes dominated the overall volumetric abundance (biovolume). The most frequently occurring taxa, occurring in 97–99 percent of samples, were flagellated cryptophytes Cryptomonas erosa and Rhodomonas minuta. Other important algal taxa included centric diatoms Stephanodiscus, Cyclotella, and Melosira species and colonial green algae Scenedesmus and Actinastrum. These taxa comprised the majority of the algal biovolume during much of the growing season. A general seasonal trend in the phytoplankton assemblages was observed, with dominance by filamentous centric diatoms Stephanodiscus and Melosira in spring and early summer, and flagellated cryptophytes and green algae, particularly Chlamydomonas sp., in late-summer; or, in 2008, dominance by blue-green algae Anabaena flos-aquae and Aphanizomenon flos-aquae during the Wapato Lake bloom event. There were 99 zooplankton taxa identified from the Tualatin River in 2006–08, composed primarily of cladocerans, copepods, and rotifers. A seasonal increase in zooplankton abundance was observed in early summer just as or shortly after the phytoplankton population began to increase, with populations growing to 15,000−120,000 organisms per cubic meter in the lower river. Zooplankton abundance showed a predictable and distinct longitudinal downstream increase, particularly downstream of Highway 99W (RM 11.6). Although grazing rates were not measured, the data suggest that, at times, zooplankton grazing may affect algal abundance and species composition in the Tualatin River, with diatoms becoming relatively less abundant and flagellated cryptophytes and green algae relatively more abundant during periods when zooplankton densities were highest. Multivariate statistical analyses identified soluble reactive phosphorus (SRP), natural flow, flow augmentation, and WWTF effluent as important factors influencing Tualatin River phytoplankton populations, with zooplankton density (particularly rotifers and copepods), specific conductance, chloride, and water temperature also having an important influence. Although SRP was highly correlated with the plankton communities, that correlation was likely the result of high or low algal activity (uptake) as SRP concentrations were often reduced to low levels during blooms. While previous studies have already established that phosphorus, among other factors such as flow, places a theoretical cap on the size of the phytoplankton population in the river, sometimes algal declines occur when SRP concentrations are apparently sufficient. To identify alternative causal factors, additional analyses were performed without SRP to focus on other water-quality parameters, zooplankton density, and flow factors. Considering data for all 3 years and including just those samples from the lower Tualatin River not affected by the 2008 Wapato Lake drainage event, three factors (percentage of reservoir flow augmentation, total natural flow, and rotifer density) best explained variations in the phytoplankton assemblages. Analyses focusing on the possible causes of algal declines included the above multivariate analyses, scrutiny of 10 specific instances of declines in algal populations during 2003–08 including several bloom–crash sequences, and analyses of historic routine watershed monitoring data from Clean Water Services. Six factors were hypothesized to be important in causing bloom crashes or impeding blooms from rebounding in August: (1) light limitation from cloudy weather, (2) a reduction in the plankton inocula or “seed” entering the lower river from upstream sources, (3) increased summer streamflows, (4) changes in the dominant sources of flow as the percentage of flow augmentation and WWTF discharges have increased, (5) zooplankton grazing, and (6) low concentrations of bioavailable phosphorus (<0.015 milligram per liter). All of these hypotheses are supported in some fashion by the available data and statistical analyses. Zooplankton grazing, short-term declines in photosynthesis from cloudy weather, total flow as it affects residence time, and the dominant source of flow are primary factors responsible for the low-DO events caused by declines in algae in the lower Tualatin River during late summer. Cloudy weather and increased turbidity are known to inhibit algal growth in the Tualatin River, and slight increases in turbidity in recent years may be a problem. Upstream sources of algae are critical in determining the characteristics and size of downstream populations, as illustrated by the Wapato Lake bloom in 2008, but more data are needed from upstream to fully define the importance of this connection. The sources of flow, through their differential contribution of plankton inocula (quality and amount), were, at times, important factors affecting phytoplankton populations. While SRP concentrations were often most highly correlated with phytoplankton species community, the bioavailability of phosphorus is still somewhat unknown and there are several sources to consider. Preliminary bioassay tests suggested that while treated wastewater effluent may stimulate algae at 30 percent concentrations, negative effects (or decreased stimulation) on Chl-a and DO production may occur at concentrations of 50 percent. Targeted data collection and future research will be needed to further understand the importance of these factors on Tualatin River phytoplankton. While the data and analysis completed for this report provide insights into future research and monitoring that would be useful to continue, additional monitoring of turbidity, Chl-a, and plankton abundance and species composition in the upper part of the basin would enhance our understanding of plankton dynamics and factors affecting phytoplankton abundance in the lower river. Assessment of the key upstream sources of algal inocula via surveys of the major flow sources as well as tributaries and wetlands would provide useful information for the management of river water quality. Other studies that could prove useful for developing management strategies include targeted experiments to evaluate the bioavailability of phosphorus from a variety of sources. New research on phytoplankton–zooplankton interactions, and studies of planktivorous fish, might also provide insight about food web dynamics and potential “top-down” effects of fish predation on the plankton communities. In addition, further development of neural-network or other water-quality models would help to evaluate management strategies and provide forecasts of water-quality conditions. Finally, periodic future reassessments of the available data with the multivariate statistical tools used in this study would be helpful to assess whether and how plankton communities are changing, and to continue to shed light on the importance of factors shaping the plankton. Although certain types and sizes of algal blooms are undesirable, minimum phytoplankton populations are an important part of aquatic food webs and are needed to maintain healthy levels of DO in the river. By understanding the sources, characteristics, causal factors, and responses of the plankton communities, management strategies can be developed to improve DO conditions in the lower Tualatin River during the important summer low-flow period.

Oregon↗

Contributions of Phosphorus from Groundwater to Streams in the Piedmont, Blue Ridge, and Valley and Ridge Physiographic Provinces, Eastern United States

Phosphorus from natural and human sources is likely to be discharged from groundwater to streams in certain geochemical environments. Water-quality data collected from 1991 through 2007 in paired networks of groundwater and streams in different hydrogeologic and land-use settings of the Piedmont, Blue Ridge, and Valley and Ridge Physiographic Provinces in the eastern United States were compiled and analyzed to evaluate the sources, fate, and transport of phosphorus. The median concentrations of phosphate in groundwater from the crystalline and siliciclastic bedrock settings (0.017 and 0.020 milligrams per liter, respectively) generally were greater than the median for the carbonate setting (less than 0.01 milligrams per liter). In contrast, the median concentrations of dissolved phosphate in stream base flow from the crystalline and siliciclastic bedrock settings (0.010 and 0.014 milligrams per liter, respectively) were less than the median concentration for base-flow samples from the carbonate setting (0.020 milligrams per liter). Concentrations of phosphorus in many of the stream base-flow and groundwater samples exceeded ecological criteria for streams in the region. Mineral dissolution was identified as the dominant source of phosphorus in the groundwater and stream base flow draining crystalline or siliciclastic bedrock in the study area. Low concentrations of dissolved phosphorus in groundwater from carbonate bedrock result from the precipitation of minerals and (or) from sorption to mineral surfaces along groundwater flow paths. Phosphorus concentrations are commonly elevated in stream base flow in areas underlain by carbonate bedrock, however, presumably derived from in-stream sources or from upland anthropogenic sources and transported along short, shallow groundwater flow paths. Dissolved phosphate concentrations in groundwater were correlated positively with concentrations of silica and sodium, and negatively with alkalinity and concentrations of calcium, magnesium, chloride, nitrate, sulfate, iron, and aluminum. These associations can result from the dissolution of alkali feldspars containing phosphorus; the precipitation of apatite; the precipitation of calcite, iron hydroxide, and aluminum hydroxide with associated sorption of phosphate ions; and the potential for release of phosphate from iron-hydroxide and other iron minerals under reducing conditions. Anthropogenic sources of phosphate such as fertilizer and manure and processes such as biological uptake, evapotranspiration, and dilution also affect phosphorus concentrations. The phosphate concentrations in surface water were not correlated with the silica concentration, but were positively correlated with concentrations of major cations and anions, including chloride and nitrate, which could indicate anthropogenic sources and effects of evapotranspiration on surface-water quality. Mixing of older, mineralized groundwater with younger, less mineralized, but contaminated groundwater was identified as a critical factor affecting the quality of stream base flow. In-stream processing of nutrients by biological processes also likely increases the phosphorus concentration in surface waters. Potential geologic contributions of phosphorus to groundwater and streams may be an important watershed-management consideration in certain hydrogeologic and geochemical environments. Geochemical controls effectively limit phosphorus transport through groundwater to streams in areas underlain by carbonate rocks; however, in crystalline and siliciclastic settings, phosphorus from mineral or human sources may be effectively transported by groundwater and contribute a substantial fraction to base-flow stream loads.

Scientific Investigations Report↗

Aquatic biological communities and associated habitats at selected sites in the Big Wood River Watershed, south-central Idaho, 2014

Assessments of streamflow (discharge) parameters, water quality, physical habitat, and biological communities were completed between May and September 2014 as part of a monitoring program in the Big Wood River watershed of south-central Idaho. The sampling was conducted by the U.S. Geological Survey in cooperation with Blaine County, Trout Unlimited, the Nature Conservancy, and the Wood River Land Trust to help identify the status of aquatic resources at selected locations in the watershed. Information in this report provides a basis with which to evaluate and monitor the long-term health of the Big Wood River and its major tributaries. Sampling sites were co-located with existing U.S. Geological Survey streamgaging stations: three on the main stem Big Wood River and four on the North Fork Big Wood River (North Fork), Warm Springs Creek (Warm Sp), Trail Creek (Trail Ck), and East Fork Big Wood River (East Fork) tributaries. The analytical results and quality-assurance information for water quality, physical habitat, and biological community samples collected at study sites during 2 weeks in September 2014 are summarized. Water-quality data include concentrations of major nutrients, suspended sediment, dissolved oxygen, and fecal-coliform bacteria. To assess the potential effects of nutrient enrichment on algal growth, concentrations of periphyton biomass (chlorophyll- a and ash free dry weight) in riffle habitats were determined at each site. Physical habitat parameters include stream channel morphology, habitat volume, instream structure, substrate composition, and riparian vegetative cover. Biological data include taxa richness, abundance, and stream-health indicator metrics for macroinvertebrate and fish communities. Statistical summaries of the water-quality, habitat, and biological data are provided along with discussion of how these findings relate to the health of aquatic resources in the Big Wood River watershed. Seasonal discharge patterns using statistical summaries of daily discharge from selected sites are reported for water years 2012–15. Results showed that annual average daily mean discharge increased from the Big Wood River near Ketchum, ID (BW Ketchum) downstream to the Big Wood River at Hailey, ID (BW Hailey), but decreased by nearly 50 percent from BW Hailey downstream to Big Wood River at Stanton Crossing near Bellevue, ID (BW Stanton). Annual variability in daily mean discharge among main-stem sites was highest at BW Stanton, suggesting that this part of the river may be subject to some level of flow alteration. Hydrologic alterations resulting in flow reduction can contribute to higher water temperature, especially during the summer months when conditions are often most stressful to fish and other stream organisms. Daily water temperature and water temperature trends from June to September 2014 are reported for select tributary and main-stem sites on the Big Wood River and can be used to assess the potential for biological impairment based on aquatic life temperature criteria for cold-water streams. The State of Idaho maximum temperature criteria for protection of cold-water aquatic life of 22 °C was exceeded at Warm Sp and BW Stanton during summer 2014, but at none of the other main-stem or tributary sites. The 13 °C critical temperature criterion for salmonid spawning was exceeded in early July 2014 at BW Ketchum and BW Hailey near the end of the rainbow trout critical spawning and rearing period. Temperature exceedances were most frequent at BW Stanton, where exceedances for rainbow trout and brown trout occurred from May through early July 2014 during most of the critical spawning and rearing period. Water quality and habitat availability did not seem to be limiting for fish or other aquatic organisms at most sites in the Big Wood River watershed. Water quality assessments in September 2014 determined no exceedances of total maximum daily load target levels. The availability and quality of habitat was limited at BW Stanton, where shallow-water habitat conditions prevailed. Macroinvertebrate community diversity was high at all sites except for BW Stanton, where low community diversity was attributed to low species richness and high abundances of a few tolerant taxa. Presence of low species diversity and high macroinvertebrate tolerance values at BW Stanton indicates that benthic community condition and stream health were reduced at that location. Fish surveys done in September 2014 did not indicate any significant reductions in native fish communities in the Big Wood River or its tributaries. Native rainbow trout ( Oncorhynchus mykiss ) and Wood River sculpin ( Cottus leiopomus ) were the dominant fish species in the drainage and were found at all tributary and main-stem sites. Non-native brown ( Salmo trutta ) and brook trout ( Salvelinus fontinalis ) were limited to lower drainage sites on the Big Wood River (BW Hailey and BW Stanton), and occurred in relatively low numbers.

Idaho↗

Water-quality characteristics of quaternary unconsolidated-deposit aquifers and lower tertiary aquifers of the Bighorn Basin, Wyoming and Montana, 1999-2001

As part of the Yellowstone River Basin National Water Quality Assessment study, ground-water samples were collected from Quaternary unconsolidated-deposit and lower Tertiary aquifers in the Bighorn Basin of Wyoming and Montana from 1999 to 2001. Samples from 54 wells were analyzed for physical characteristics, major ions, trace elements, nutrients, dissolved organic carbon, radionuclides, pesticide compounds, and volatile organic compounds (VOCs) to evaluate current water-quality conditions in both aquifers. Water-quality samples indicated that waters generally were suitable for most uses, and that natural conditions, rather than the effects of human activities, were more likely to limit uses of the waters. Waters in both types of aquifers generally were highly mineralized, and total dissolved-solids concentrations frequently exceeded the U.S. Environmental Protection Agency (USEPA) Secondary Maximum Contaminant Level (SMCL) of 500 milligrams per liter (mg/L). Because of generally high mineralization, waters from nearly one-half of the samples from Quaternary aquifers and more than one-half of the samples from lower Tertiary aquifers were not classified as fresh (dissolved-solids concentration were not less than 1,000 mg/L). The anions sulfate, fluoride, and chloride were measured in some ground-water samples at concentrations greater than SMCLs. Most waters from the Quaternary aquifers were classified as very hard (hardness greater than 180 mg/L), but hardness varied much more in waters from the lower Tertiary aquifers and ranged from soft (less than 60 mg/L) to very hard (greater than 180 mg/L). Major-ion chemistry varied with dissolved-solids concentrations. In both types of aquifers, the predominant anion changes from bicarbonate to sulfate with increasing dissolved-solids concentrations. Samples from Quaternary aquifers with fresh waters generally were calcium-bicarbonate, calcium-sodium-bicarbonate, and calcium-sodium-sulfate-bicarbonate type waters, whereas samples with larger concentrations generally were calcium-sodium-sulfate, calcium-sulfate, or sodium-sulfate-type waters. In the lower Tertiary aquifers, samples with fresh waters generally were sodium-bicarbonate or sodium-bicarbonate-sulfate type waters, whereas samples with larger concentrations were sodium-sulfate or calcium-sodium-sulfate types. Concentrations of most trace elements in both types of aquifers generally were small and most were less than applicable USEPA standards. The trace elements that most often did not meet USEPA secondary drinking-water standards were iron and manganese. In fact, the SMCL for manganese was the most frequently exceeded standard; 68 percent of the samples from the Quaternary aquifers and 31 percent of the samples from the lower Tertiary aquifers exceeded the manganese standard. Geochemical conditions may control manganese in both aquifers as concentrations in Quaternary aquifers were negatively correlated with dissolved oxygen concentrations and concentrations in lower Tertiary aquifers decreased with increasing pH. Elevated nitrate concentrations, in addition to detection of pesticides and VOCs in both aquifers, indicated some effects of human activities on ground-water quality. Nitrate concentrations in 36 percent of the wells in Quaternary aquifers and 28 percent of the wells in lower Tertiary aquifers were greater than 1 mg/L, which may indicate ground-water contamination from human sources. The USEPA drinking-water Maximum Contaminant Level (MCL) for nitrate, 10 mg/L, was exceeded in 8 percent of samples collected from Quaternary aquifers and 3 percent from lower Tertiary aquifers. Nitrate concentrations in Quaternary aquifers were positively correlated with the percentage of cropland and other agricultural land (non-cropland), and negatively correlated with rangeland and riparian land. In the lower Tertiary aquifers, nitrate concentrations only were correlated with the percentage of cropland. Concentratio

Scientific Investigations Report↗