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At least 1,657 records · Page 92Linked to original sources

USGS2023

Ancient bears provide insights into Pleistocene ice age refugia in Southeast Alaska

During the Late Pleistocene, major parts of North America were periodically covered by ice sheets. However, there are still questions about whether ice-free refugia were present in the Alexander Archipelago along the Southeast (SE) Alaska coast during the last glacial maximum (LGM). Numerous subfossils have been recovered from caves in SE Alaska, including American black ( Ursus americanus ) and brown ( U. arctos ) bears, which today are found in the Alexander Archipelago but are genetically distinct from mainland bear populations. Hence, these bear species offer an ideal system to investigate long-term occupation, potential refugial survival and lineage turnover. Here, we present genetic analyses based on 99 new complete mitochondrial genomes from ancient and modern brown and black bears spanning the last ~45,000 years. Black bears form two SE Alaskan subclades, one preglacial and another postglacial, that diverged >100,000 years ago. All postglacial ancient brown bears are closely related to modern brown bears in the archipelago, while a single preglacial brown bear is found in a distantly related clade. A hiatus in the bear subfossil record around the LGM and the deep split of their pre- and postglacial subclades fail to support a hypothesis of continuous occupancy in SE Alaska throughout the LGM for either species. Our results are consistent with an absence of refugia along the SE Alaska coast, but indicate that vegetation quickly expanded after deglaciation, allowing bears to recolonize the area after a short-lived LGM peak.

Alaska↗

USGS2011

Landscape matrix mediates occupancy dynamics of Neotropical avian insectivores

In addition to patch‐level attributes (i.e., area and isolation), the nature of land cover between habitat patches (the matrix) may drive colonization and extinction dynamics in fragmented landscapes. Despite a long‐standing recognition of matrix effects in fragmented systems, an understanding of the relative impacts of different types of land cover on patterns and dynamics of species occurrence remains limited. We employed multi‐season occupancy models to determine the relative influence of patch area, patch isolation, within‐patch vegetation structure, and landscape matrix on occupancy dynamics of nine Neotropical insectivorous birds in 99 forest patches embedded in four matrix types (agriculture, suburban development, bauxite mining, and forest) in central Jamaica. We found that within‐patch vegetation structure and the matrix type between patches were more important than patch area and patch isolation in determining local colonization and local extinction probabilities, and that the effects of patch area, isolation, and vegetation structure on occupancy dynamics tended to be matrix and species dependent. Across the avian community, the landscape matrix influenced local extinction more than local colonization, indicating that extinction processes, rather than movement, likely drive interspecific differences in occupancy dynamics. These findings lend crucial empirical support to the hypothesis that species occupancy dynamics in fragmented systems may depend greatly upon the landscape context.

Clarendon Parish, Manchester Parish↗

USGS1993

Ecology and population status of Northern Fulmars ( Fulmarus glacialis ) of the North Pacific

I n the North Pacific, the breeding distribution of Northern Fulmars ( Fulmarus glacialis ) includes about equal numbers of very large colonies (50,000-500,000 individuals) and relatively small ones (5-5,000 individuals). The almost complete segregation of light and dark colour phases between adjacent colonies in the Bering Sea and Sea of Okhotsk suggests there is little gene flow among the major colonies. Annual productivity averaged 0.42 chicks per breeding pair in 10 years at one colony in the Gulf of Alaska; adult survival was 0.97 per year over five years at the same location. There is no clear indication of population change at either of two large colonies studied, but several small colonies in the western Aleutians and northern Gulf of Alaska have increased since the mid-1970s. Fulmars appear to have low vulnerability to oil pollution and drifting gill nets, but they are relatively heavy consumers of plastic debris. Introduced predators probably reduced fulmar populations in the past. Population monitoring is recommended for one or more of the large Pacific colonies and several of the smaller ones. Small colonies may provide early indications of changing population status.

Conference Paper↗

USGS2023

Does post-fire recovery of native grasses across abiotic-stress and invasive-grass gradients match theoretical predictions, in sagebrush steppe?

Interactions among species can strongly affect how plant communities reassemble after disturbances, and variability among native and invasive species across environmental gradients must be known in order to manage plant-community recovery. The stress-gradient hypothesis (SGH) predicts species interactions will be more positive in abiotically stressful conditions and conversely, more negative in benign conditions, and the resistance-resilience concept (RRC) may predict where and when invasions will complicate ecosystem recovery. We evaluated how abiotic stress and biotic interactions determine native bunchgrass abundances across environmental gradients using additive models of cover data from over 500 plots re-measured annually for 5 years as they recovered naturally (untreated) after a megafire (>100,000 ha) in sagebrush steppe threated by the invasive-grass and fire cycle. The species included native bunchgrasses, bluebunch wheatgrass ( Pseudoroegneria spicata ) and Sandberg bluegrass ( Poa secunda ), and the exotic and invasive annual cheatgrass ( Bromus tectorum ). We asked whether associations between native bunchgrasses and cheatgrass were context dependent and if the SGH could help predict interspecific associations between species in a semiarid environment. The association of cover of each native bunchgrass to cheatgrass was not uniform, and instead varied from neutral to negative across environmental gradients in both space and time (i.e., weather), to which the species had nonlinear and sometimes threshold-like responses. Consistent with the SGH, bunchgrasses were generally more negatively related to cheatgrass (i.e., putative competition) in conditions which increased the cover of each bunchgrass – which were higher elevations and temperatures and lower solar heatload, and, for Sandberg bluegrass, drier conditions. There were few indications of positive interactions (i.e., putative facilitation) in stressful conditions, and instead associations were again negative, albeit weaker, in some of the conditions evaluated. Synthesis . These findings demonstrate that the negative association among native bunchgrasses and cheatgrass is context dependent and is determined by the abundances of both interacting species which is driven by environmental stress. This led to a hypothesis that together Sandberg bluegrass and bluebunch wheatgrass provide complementary resistance to cheatgrass at the landscape level, despite their different ecology and contrary to the management preference for bluebunch wheatgrass. Sandberg bluegrass might be critical for providing resistance against cheatgrass where invasion potential is greatest, i.e., at lower elevations, where bluebunch wheatgrass is scarce.

Global Ecology and Conservation↗

USGS2011

Evaluating interactions between river otters and muskrats at bridge crossings in Kentucky

hreatened or endangered. Muskrat populations have been reduced in some streams where North American river otters (Lontra canadensis) were reintroduced, and it has been hypothesized that otter reintroduction could be used as a tool for conservation of mussels. We used occupancy estimation methods to evaluate the ecological relationship between muskrats and otters by collecting presence–absence data based on field sign found at bridge crossings in eastern and central Kentucky. Mean detection probabilities (ps) and occupancy probabilities (ψs) for muskrats were 0.692 (SE = 0.045) and 0.723 (SE = 0.071) and for otters were 0.623 (SE = 0.036) and 0.662 (SE = 0.069), respectively. Otter occupancy was related negatively to distance from release sites, which suggests that the otter population is still expanding its range. A 2-species interaction model indicated that the occupancy by muskrats and river otters was independent, and we conclude that river otter reintroduction would not be an effective strategy for conserving mussels.

Journal of Mammalogy↗

USGS2025

A hidden heelsplitter: Distribution of an undescribed endemic freshwater mussel in the Barrens Plateau

Malacologists generally acknowledge that the Alasminota holstonia (Tennessee Heelsplitter) populations in the Caney Fork, Elk, and Duck river drainages in the Barrens Plateau region of middle Tennessee likely represent a closely related, but distinct, species, collectively referred to as Alasminota sp. (Barrens Heelsplitter). Recent surveys indicate that the species persists in at least 5 streams: Collins River, Pocahontas Branch, Witty Creek, and Pepper Hollow Branch in the Caney Fork River drainage and Little Duck River in the Duck River drainage, with evidence of recruitment in 2 of these streams. These findings suggest a restricted distribution and highlight the need for taxonomic assessment through genetic analysis. If elevated to species status, the Barrens Heelsplitter would represent a narrow endemic that may require conservation attention, underscoring the ecological significance of Tennessee's Barrens Plateau Region.

Tennessee↗

USGS2008

Fall diets of red-breasted merganser (Mergus serrator) and walleye (Sander vitreus) in Sandusky Bay and adjacent waters of western Lake Erie

Although published studies indicate the contrary, there is concern among many sport anglers that migrating red-breasted mergansers (Mergus serrator) and other waterbirds pose a competitive threat to sport fish species such as walleye (Sander vitreus) in Lake Erie. We quantified the diet of autumn-migrant mergansers and walleye during 1998-2000 in Sandusky Bay and adjacent waters of western Lake Erie. We hypothesized that the diets of both predators would be similar in species composition, but because of different foraging ecologies their diets would differ markedly in size of prey consumed. In addition to predator samples, we used trawl data from the same general area as an index of prey availability. We found that mergansers fed almost exclusively on fish (nine species). Gizzard shad (Dorosoma cepedianum), emerald shiner (Notropis atherinoides) and round goby (Neogobius melanostomus) were consumed in the greatest numbers, most frequently and comprised the greatest biomass. Walleye fed exclusively on fish: gizzard shad, alewife (Alosa psuedoharengus) and emerald shiner were consumed in the greatest numbers, most frequently and comprised the greatest biomass. Diet overlap between mergansers and walleye was 67% by weight and 66% by species frequency. Mean total lengths of gizzard shad, emerald shiner and round goby found in walleye stomachs exceeded those captured in trawls by 47%, on average. Mean total lengths of gizzard shad, emerald shiner and round goby were greater in walleye stomachs than in merganser stomachs. Mean total lengths of emerald shiner and round goby were less in merganser stomachs than in trawls. Our results suggest that although the diets of walleye and mergansers overlapped considerably, mergansers generally consumed smaller fish than walleye. Given the abundance and diversity of prey species available, and the transient nature of mergansers on Lake Erie during migration, we conclude that competition for food between these species is minimal.

American Midland Naturalist↗

USGS2021

Sediment budget for watersheds of West Maui, Hawaii

Episodic runoff brings suspended sediment to West Maui’s nearshore waters, turning them from blue to brown. This pollution degrades the ecological, cultural, and recreational value of these iconic nearshore waters. We used mapping, monitoring, and modeling to identify and quantify the watershed sources for fine sediment that pollutes the nearshore each year. These results focus strategies to reduce pollution on the outstanding sources for this sediment. Terrestrial runoff causing coastal plumes now occurs when two or more hours of rain falls at rates greater than 10–20 millimeter (mm) per hour in source watersheds. Analysis of recent and historical rainfall indicates that West Maui communities can expect rainfalls to bring coastal plumes at least 3–5 times per year. Former agricultural fields and some unimproved roads are possible sources for the fine sediment of these plumes. We found, however, that these obvious sources do not produce plumes during small annual storms, because they drain water at rates that far exceed most annual rainfalls and because there is no evidence for runoff from rains that caused recent plumes. Streambanks now eroding into historic fill terraces of sands, silts, and clays are a more plausible source. These terraces are found only downstream of historical agricultural fields and are composed of silt and fine sand. Surveys show that the fill terraces occupy ~40 percent of streambank length, making them extensive. During 2015–2016, these deposits eroded at median rates of 5–24 mm per year. Summed over West Maui’s watersheds, these rates imply sediment loads carried to the coast that can be ten times or more than modeled pre-human values. A sediment budget indicates that bank erosion of fill terraces from a few watersheds likely dominates the current annual fine-sediment load to the nearshore, with Kahana Stream watershed producing the largest annual input of 285 metric tons, the equivalent of 29 dump-truck loads every year. Although past large storms have contributed to sediment loading, annual plume generation is now caused by smaller rainfalls eroding these near-stream terrace deposits, a legacy of historic agriculture. Treatments of former agricultural fields, roads, and reserve forests are consequently not likely to measurably effect sediment pollution from smaller, more frequent storms. Increased runoff from residential and commercial development of West Maui has the potential to exacerbate sediment plumes from such storms.

Hawaii↗

USGS2023

Mass mortality of collector urchins Tripneustes gratilla in Hawai`i

As grazers, sea urchins are keystone species in tropical marine ecosystems, and their loss can have important ecological ramifications. Die-offs of urchins are frequently described, but their causes are often unclear, in part because systematic examinations of animal tissues at gross and microscopic level are not done. In some areas, urchins are being employed to control invasive marine algae. Here, we describe the pathology of a mortality event in Tripneustes gratilla in Hawai`i where urchins were translocated to control invasive algae. Although we did not determine the cause of the mortality event, our investigation indicates that animals died from inflammation of the test and epidermal ulceration, followed by inability to maintain coelomic fluid volume, colonization of coelomic fluid by opportunists (diatom, algae), and inappetence. Parasites, bacteria, fungi, and viruses were not evident as a primary cause of death. Pathology was suggestive of a toxin or other environmental cause such as lack of food, possibilities that could be pursued in future investigations. These findings highlight the need for caution and additional tools to better assess health when translocating marine invertebrates to ensure maximal biosecurity.

Hawaii↗

USGS2006

Using digital photographs and object-based image analysis to estimate percent ground cover in vegetation plots

Ground vegetation influences habitat selection and provides critical resources for survival and reproduction of animals. Researchers often employ visual methods to estimate ground cover, but these approaches may be prone to observer bias. We therefore evaluated a method using digital photographs of vegetation to objectively quantify percent ground cover of grasses, forbs, shrubs, litter, and bare ground within 90 plots of 2m2. We carried out object-based image analysis, using a software program called eCognition, to divide photographs into different vegetation classes (based on similarities among neighboring pixels) to estimate percent ground cover for each category. We used the Kappa index of agreement (KIA) to quantify correctly classified, randomly selected segments of all images. Our KIA values indicated strong agreement (> 80%) of all vegetation categories, with an average of 90-96% (SE = 5%) of shrub, litter, forb, and grass segments classified correctly. We also created artificial plots with known percentages of each vegetation category to evaluate the accuracy of software predictions. Observed differences between true cover and eCognition estimates for each category ranged from 1 to 4%. This technique provides a repeatable and reliable way to estimate percent ground cover that allows quantification of classification accuracy. ?? The Ecological Society of America.

Frontiers in Ecology and the Environment↗

USGS2012

Seasonal use of shallow water habitat in the Lower Snake River reservoirs by juvenile fall Chinook salmon

The U.S. Army Corps of Engineers (COE) is preparing a long term management plan for sediments that affect the authorized project purposes of the Lower Granite, Little Goose, Lower Monumental, and Ice Harbor reservoirs (hereafter, the lower Snake River reservoirs), and the area from the mouth of the Snake River to Ice Harbor Dam. We conducted a study from spring 2010 through winter 2011 to describe the habitat use by juvenile Chinook salmon within a selected group of shallow water habitat complexes (< 6 m deep) in the lower Snake River reservoirs to help inform the long-term plan. Natural fry and parr were present within all four shallow water habitat complexes that we studied from early spring through early summer, and parr ( = 40,345 ± 18,800 [error bound]) were more abundant than fry ( = 24,615 ± 5,701). Water < 2 m deep was highly used for rearing by natural fall Chinook salmon subyearlings (fry and parr combined; hereafter natural subyearlings) based on duration of use and relative group abundances during spring and summer, whereas the 2–6 m depth interval was more highly used by migratory hatchery fall Chinook salmon subyearlings and spring, summer, and fall Chinook salmon yearlings. Overall mean spring-summer apparent density of natural subyearlings was 15.5 times higher within the < 2 m depth interval than within the 2–6 m depth interval. Density of natural subyearlings also decreased as the distance a given shallow water habitat complex was located from the riverine spawning areas increased. Reservoir-type juveniles (or fish likely destined to become reservoir-type juveniles) were present in the lower Snake River reservoirs from fall 2010 through winter 2011; however, use of shallow water habitat by reservoir-type juveniles was limited during our study. We only collected 38 reservoir-type juveniles in shallow water habitat sites in beach and lampara seines during the fall. Radiotelemetry data revealed that though many tagged fish passed shallow water habitat sites, relatively few fish entered them and the median time fish spent within a given site was less than 1.4 h. Fish located by mobile tracking away from study sites were pelagically oriented, and generally not found over shallow water or close to shore. The findings in this report: (1) support the selection of natural fall Chinook subyearlings as the indicator group for determining the potential benefits of using dredge spoils to create shallow water habitat, (2) provide evidence for shallow water habitat use by natural subyearlings, (3) provide evidence against large-scale use of shallow water habitat by reservoir-type juveniles, (4) suggest that the depth criterion for defining shallow water habitat (i.e., < 6 m deep) warrants reconsideration, and (5) provide guidance for when to dredge and create shallow water habitat. Future research on habitat preference, feeding ecology, the food web, and intra-specific competition would help to better inform the long-term management plan.

Report↗

USGS2021

Valleys of fire: Historical fire regimes of forest-grassland ecotones across the montane landscape of the Valles Caldera National Preserve, New Mexico, USA

Context Montane grasslands and forest-grassland ecotones are unique and dynamic components of many landscapes, but the processes that regulate their dynamics are difficult to observe over ecologically relevant time spans. Objectives We aimed to demonstrate the efficacy of using grassland-forest ecotone trees to reconstruct spatial and temporal properties of the historical fire regime in a complex landscape of montane forests and adjacent grasslands. Methods We sampled and crossdated fire-scarred trees along ecotones and compared variations in historical fire occurrence within and among nine adjoining valle basins in a 10,158 ha landscape. We analyzed fire year extensiveness, climate regulation, and the occurrence of consecutive fire years. Results The resulting tree-ring record covers 1240–2005 AD, with 296 trees recording 125 replicated fire years during the analysis period 1601–1902 AD . Mean fire intervals for all events recorded on two or more trees ranged from 4.7 to 13.6 years in individual valles , and a mean of 2.4 ± 1.7 (SD) years at the landscape scale. Between 1660 and 1902, extensive fires occurring in six or more valles occurred 15 times, on average at ~ 17-year intervals; 29 moderately widespread fires (3–5 valles ) occurred during this period, at 8.7 year intervals on average. Widespread events occurred in years with a significantly lower Palmer Drought Severity Index (PDSI) preceded by years of significantly positive PDSI, indicating conditions favorable for fine fuel production. Spatial reconstruction of fire extent revealed multiple occurrences of consecutive-year fires burning non-overlapping areas, associated with persistent low PDSI anomalies preceded by positive conditions in antecedent years. Conclusions A landscape spatiotemporal approach to reconstructing fire regimes of montane forest-grassland complexes provides a valuable baseline for guiding prescribed and natural fire management at large spatial scales.

New Mexico↗

USGS2019

Partitioning global change: Assessing the relative importance of changes in climate and land cover for changes in avian distribution

Understanding the relative impact of climate change and land cover change on changes in avian distribution has implications for the future course of avian distributions and appropriate management strategies. Due to the dynamic nature of climate change, our goal was to investigate the processes that shape species distributions, rather than the current distributional patterns. To this end, we analyzed changes in the distribution of Eastern Wood Pewees (Contopus virens) and Red-eyed Vireos (Vireo olivaceus) from 1997 to 2012 using Breeding Bird Survey data and dynamic correlated-detection occupancy models. We estimated the local colonization and extinction rates of these species in relation to changes in climate (hours of extreme temperature) and changes in land cover (amount of nesting habitat). We fit six nested models to partition the deviance explained by spatial and temporal components of land cover and climate. We isolated the temporal components of environmental variables because this is the essence of global change. For both species, model fit was significantly improved when we modeled vital rates as a function of spatial variation in climate and land cover. Model fit only improved insignificantly when we added temporal variation in climate and land cover to the model. Temporal variation in climate explained more deviance than temporal variation in land cover, although both combined only explained 20% (Eastern Wood Pewee) and 6% (Red-eyed Vireo) of temporal variation in vital rates. Our results showing a significant correlation between initial occupancy and environmental covariates are consistent with biological expectation and previous studies. Our results estimating a weak correlation between vital rates and temporal changes in covariates indicate that we have yet to identify the most relevant components of global change changing the distributions of these species and, more significantly, that spatially significant covariates are not necessarily driving temporal shifts in avian distributions.

Ecology and Evolution↗

USGS2023

Pardus in the press: Drivers of leopard (Panthera pardus fusca) attack occurrence on humans in Nepal

The negative impact of large carnivore presence in human-dominated landscapes manifests as livestock depredation and in extreme cases as attacks on humans. In the case of conflict with leopards in Nepal, attacks resulting in human fatality have become more frequent over time, thus creating an urgent socio-ecological and management issue. We estimated the occurrence of leopard attacks in Nepal from human-leopard conflict cases reported in the media. We used occupancy models to analyse data collected from online news reports on incidents of leopard attacks on humans to explore drivers of leopard attacks on a landscape scale. Our results suggest that the probability of occurrence of leopard attack is associated with human population density, terrain ruggedness and livestock density. The human population density effect may be indicative of a density-dependent relationship, where attacks are more likely in areas where an increased abundance of humans increases encounter rates with leopards. The positive effect of livestock density suggests that livestock may be drawing leopards into human settlements, and consequently increasing the likelihood of attacks on humans. Terrain ruggedness might be offering ideal conditions to facilitate attacks on humans, for example remoteness and high amounts of cover to launch ambush attacks. We provide inference and insights into key determinants of leopard attacks on humans on a landscape scale. These insights can be used to guide future research, inform mitigation measures to reduce leopard attacks and foster a better understanding of the interaction between people and leopards. This study demonstrates the applicability and novelty of using a hierarchical modelling framework applied to freely and publicly available media reports to inform the applied management of human-wildlife conflict at a national scale.

People and Nature↗

USGS2003

Predicting changes in hydrologic retention in an evolving semi-arid alluvial stream

Hydrologic retention of solutes in hyporheic zones or other slowly moving waters of natural channels is thought to be a significant control on biogeochemical cycling and ecology of streams. To learn more about factors affecting hydrologic retention, we repeated stream-tracer injections for 5 years in a semi-arid alluvial stream (Pinal Creek, Ariz.) during a period when streamflow was decreasing, channel width increasing, and coverage of aquatic macrophytes expanding. Average stream velocity at Pinal Creek decreased from 0.8 to 0.2 m/s, average stream depth decreased from 0.09 to 0.04 m, and average channel width expanded from 3 to 13 m. Modeling of tracer experiments indicated that the hydrologic retention factor ( R h ), a measure of the average time that solute spends in storage per unit length of downstream transport, increased from 0.02 to 8 s/m. At the same time the ratio of cross-sectional area of storage zones to main channel cross-sectional area ( A s / A ) increased from 0.2 to 0.8 m 2 /m 2 , and average water residence time in storage zones ( t s ) increased from 5 to 24 min. Compared with published data from four other streams in the US, Pinal Creek experienced the greatest change in hydrologic retention for a given change in streamflow. The other streams differed from Pinal Creek in that they experienced a change in streamflow between tracer experiments without substantial geomorphic or vegetative adjustments. As a result, a regression of hydrologic retention on streamflow developed for the other streams underpredicted the measured increases in hydrologic retention at Pinal Creek. The increase in hydrologic retention at Pinal Creek was more accurately predicted when measurements of the Darcy–Weisbach friction factor were used (either alone or in addition to streamflow) as a predictor variable. We conclude that relatively simple measurements of channel friction are useful for predicting the response of hydrologic retention in streams to major adjustments in channel morphology as well as changes in streamflow.

Advances in Water Resources↗

USGS2002

Genetic diversity in a morphologically conservative invasive taxon: Multiple introductions of swamp eels to the southeastern United States

Genetic analysis of introduced populations, especially in morphologically conservative taxa, can clarify introduction histories, identify management units and source populations, provide a more realistic estimate of the frequency of successful invasion, and suggest strategies for preventing further introductions. In the last 7 years, populations of swamp eels, referred to the Asian genus Monopterus (Family Synbranchidae) on the basis of external morphology, have been discovered in aquatic habitats near Atlanta, Georgia; Tampa, Florida; North Miami, Florida; and most recently in close proximity to Everglades National Park in Homestead, Florida. Swamp eels are large predators capable of dispersal over land and have the potential to disrupt already threatened ecosystems. We analyzed mitochondrial DNA sequences from four known populations in the continental United States and samples from Malaysia, Indonesia, Vietnam, and two locations in China to determine introduction histories, source populations, genetic diversity, and relationships among populations. Our results indicate that there have been at least three independent introductions of genetically distinct forms. Introduced populations in close proximity (separated by <40 km) are genetically distinct. The level of sequence difference among introduced populations reaches levels seen among sister families of teleost fishes for the same region of the mitochondrial genome. These genetically distinct introduced populations in all likelihood represent at least two and possibly three species. Regardless of species status, these genetically distinct lineages may be expected to vary in ecological or life-history traits, representing different potential threats to the ecosystems where they have been introduced. Given the success of swamp eels in invading many habitats around the world, further study of these eels is warranted to elucidate the characteristics of successful invaders and invasions.

Conservation Biology↗

USGS2014

Predicting connectivity of green turtles at Palmyra Atoll, central Pacific: a focus on mtDNA and dispersal modelling

Population connectivity and spatial distribution are fundamentally related to ecology, evolution and behaviour. Here, we combined powerful genetic analysis with simulations of particle dispersal in a high-resolution ocean circulation model to investigate the distribution of green turtles foraging at the remote Palmyra Atoll National Wildlife Refuge, central Pacific. We analysed mitochondrial sequences from turtles ( n = 349) collected there over 5 years (2008–2012). Genetic analysis assigned natal origins almost exclusively (approx. 97%) to the West Central and South Central Pacific combined Regional Management Units. Further, our modelling results indicated that turtles could potentially drift from rookeries to Palmyra Atoll via surface currents along a near-Equatorial swathe traversing the Pacific. Comparing findings from genetics and modelling highlighted the complex impacts of ocean currents and behaviour on natal origins. Although the Palmyra feeding ground was highly differentiated genetically from others in the Indo-Pacific, there was no significant differentiation among years, sexes or stage-classes at the Refuge. Understanding the distribution of this foraging population advances knowledge of green turtles and contributes to effective conservation planning for this threatened species.

Journal of the Royal Society Interface↗

USGS2023

Stream restoration produces transitory, not permanent, changes to fish assemblages at compensatory mitigation sites

There is inconsistent evidence that stream restoration projects lead to recovery of ecosystem attributes, especially stream biota. While some assessments have documented desired changes in fish community metrics in the first years following restoration, longer-term studies have not always corroborated these findings. In this study, we used data and monitoring reports submitted to federal regulators by stream mitigation consultants to examine whether in-stream restoration activities led to changes in fish community attributes at 23 compensatory mitigation projects representing 53 sampling sites in Georgia, United States over 7 years of post-restoration monitoring. Modeling results indicated that abundance and species richness of fishes generally increased in the first years after restoration before decreasing to baseline levels by the seventh year. This pattern was consistent for models considering sensitive fish taxa, as well as at sites across a range of agricultural and forested land cover percentages. However, the effect of restoration on species richness was dampened in larger streams and at more urbanized locations. A community trajectory analysis supported the findings that fish community change was transitory at most sites. Remote estimation of canopy cover change at restoration sites suggested that the hump-shaped response may be driven by increased light availability during the immediate-post restoration period, followed by subsequent re-shading of stream channels by riparian plantings. Our analysis indicates that reach-level manipulation of streams should not be expected to induce long-term changes in fish communities, and that publicly available monitoring reports may be leveraged to address questions of stream restoration efficacy.

Restoration Ecology↗