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At least 1,621 records · Page 90Linked to original sources

USGS2017

Putting flow-ecology relationships into practice: A decision-support system to assess fish community response to water-management scenarios

This paper presents a conceptual framework to operationalize flow–ecology relationships into decision-support systems of practical use to water-resource managers, who are commonly tasked with balancing multiple competing socioeconomic and environmental priorities. We illustrate this framework with a case study, whereby fish community responses to various water-management scenarios were predicted in a partially regulated river system at a local watershed scale. This case study simulates management scenarios based on interactive effects of dam operation protocols, withdrawals for municipal water supply, effluent discharges from wastewater treatment, and inter-basin water transfers. Modeled streamflow was integrated with flow–ecology relationships relating hydrologic departure from reference conditions to fish species richness, stratified by trophic, reproductive, and habitat characteristics. Adding a hypothetical new water-withdrawal site was predicted to increase the frequency of low-flow conditions with adverse effects for several fish groups. Imposition of new reservoir release requirements was predicted to enhance flow and fish species richness immediately downstream of the reservoir, but these effects were dissipated further downstream. The framework presented here can be used to translate flow–ecology relationships into evidence-based management by developing decision-support systems for conservation of riverine biodiversity while optimizing water availability for human use.

Water↗

USGS2015

Upstream dispersal of an invasive crayfish aided by a fish passage facility

Fish passage facilities for reservoir dams have been used to restore habitat connectivity within riverine networks by allowing upstream passage for native species. These facilities may also support the spread of invasive species, an unintended consequence and potential downside of upstream passage structures. We documented dam passage of the invasive virile crayfish, Orconectes virilis (Hagen, 1870), at fish ladders designed for upstream passage of American eels, Anguilla rostrata (Lesueur, 1817), in the Shenandoah River drainage, USA. Ladder use and upstream passage of 11 virile crayfish occurred from 2007–2014 during periods of low river discharge (<30 m 3 s –1 ) and within a wide range of water temperatures from 9.0–28.6 °C. Virile crayfish that used the eel ladders were large adults with a mean carapace length and width of 48.0 mm and 24.1 mm, respectively. Our data demonstrated the use of species-specific fish ladders by a non-target non-native species, which has conservation and management implications for the spread of aquatic invasive species and upstream passage facilities. Specifically, managers should consider implementing long-term monitoring of fish passage facilities with emphasis on detection of invasive species, as well as methods to reduce or eliminate passage of invasive species.

Virginia, West Virginia↗

USGS2016

Pathways of fish invasions in the Mid-Atlantic region of the United States

Non-native fish introductions are a major threat to biodiversity and fisheries, and occur through numerous pathways that vary regionally in importance. A key strategy for managing invasions is to focus prevention efforts on pathways posing the greatest risk of future introductions. We identified high-risk pathways for fish establishment in the Mid-Atlantic region of the United States based on estimates of probability of establishment and records of previous introductions, which were considered in the context of emerging socioeconomic trends. We used estimates of propagule pressure, species’ environmental tolerance, and size of species pool to assess the risk of establishment by pathway. Pathways varied considerably in historic importance and species composition, with the majority of species introduced intentionally via stocking (primarily for sport, forage, or biocontrol) or bait release. Bait release, private stocking, illegal introductions intended to establish reproducing populations (e.g., of sport fish), aquaculture, and the sale of live organisms all create risks for future invasions in the Mid-Atlantic region. Of these pathways, bait release probably poses the greatest risk of introductions for the Mid-Atlantic region because propagule pressure is moderate, most released species are tolerant of local environmental conditions, and the pool of species available for transplantation is large. Our findings differ considerably from studies in other regions (e.g., bait release is a dominant pathway in the Mid-Atlantic region, whereas illegal introduction of sport fish is dominant in the western US and aquarium releases are dominant in Florida), demonstrating the need for regional-scale assessments of, and management strategies for, introduction pathways.

Delaware, Maryland, New York, North Carolina, Penn↗

USGS2012

Salinity of the Little Colorado River in Grand Canyon confers anti-parasitic properties on a native fish

Water in the Little Colorado River within Grand Canyon is naturally high in salt (NaCl), which is known to prohibit development of external fish parasites such as Ich ( Ichthyophthirius multifiliis ). The naturally high salinity (>0.3%) of the Little Colorado River at baseflow may be one factor allowing survival and persistence of larval and juvenile humpback chub ( Gila cypha ) and other native fishes in Grand Canyon. We compared salinity readings from the Little Colorado River to those reported in the literature as being effective at removing protozoan parasites from fish. In laboratory tests, 10 juvenile roundtail chub ( Gila robusta ; 61–90 mm TL) were randomly placed into each of 12, 37-L aquaria filled with freshwater, water obtained from the Little Colorado River (0.3% salinity), or freshwater with table salt added until the salinity reached 0.3%. Roundtail chub was used as a surrogate for humpback chub in this study because the species is not listed as endangered but is morphologically and ecologically similar to humpback chub. All roundtail chub infected with Ich recovered and survived when placed in water from the Little Colorado River or water with 0.3% salinity, but all experimental fish placed in freshwater died because of Ich infection. The naturally high salinity of the Little Colorado River at baseflow (0.22%–0.36%), appears sufficiently high to interrupt the life cycle of Ich and may allow increased survival of larval and juvenile humpback chub relative to other areas within Grand Canyon.

Arizona↗

USGS2016

Habitat and fish assemblage associations and current status of northern leatherside chub Lepidomeda copei in western Wyoming

Human activities have extensively altered native fish assemblages and their habitats in the western United States. Conservation and restoration for long-term persistence of these fishes requires knowledge of their distributional patterns and life history requirements. Northern leatherside chub Lepidomeda copei (hereafter northern leatherside) is a cyprinid native to the Snake and Bear River Basins of Wyoming, Idaho, Nevada, and Utah, and it is believed to have declined in distribution relative to historical records. To address information gaps in the species' ecology and assess its status in the state, the objectives of this study were first to document the distribution (2010–2011) of northern leatherside in Wyoming and then to examine habitat factors related to the entire fish assemblage and to evaluate specific habitat associations of northern leatherside in the Bear River Basin, Wyoming. In the Bear River and Upper Snake River Basins, we documented the distribution of northern leatherside and compared it to the previously known distribution. Across the Bear River Basin, we used habitat measurements to assess abiotic features related to the distribution and abundance of northern leatherside. Northern leatherside was found across the Bear River Basin and was present in 2 streams each in the Upper Snake River and Green River Basins in Wyoming. Populations in Wyoming appear to represent the core of northern leatherside range, and our work provided a finer-scale delineation of the species' occurrence. Northern leatherside was collected from a variety of habitats, but multivariate analyses and occurrence modeling indicated it was associated with increased channel depth and depth variability, and positively associated with other native fishes (including mountain sucker Catostomus platyrhynchus, redside shiner Richardsonius balteatus, and speckled dace Rhinichthys osculus). These findings on the distribution and ecology of northern leatherside provide important new information to assist successful management and conservation efforts within Wyoming and across the species' range.

Wyoming↗

USGS2024

Autonomous samplers and environmental DNA metabarcoding: Sampling day and primer choice have greatest impact on fish detection probabilities

Unprecedented rates of biodiversity loss and ecosystem function necessitate the use of rapid, efficacious, and cost-effective biomonitoring tools. The combination of autonomous samplers and high throughput sequencing (i.e., “metabarcoding”) of environmental DNA ( eDNA ) samples enables characterization of entire communities at high frequency and can be an important tool for conservation and management, allowing researchers to track fluctuations in biodiversity. We deployed two autonomous samplers at two U.S. Geological Survey streamgage sites in the upper Snake River (Wyoming and Idaho, USA) to collect eDNA samples from July-September 2021 and 2022 to characterize fish diversity. We used a probabilistic approach to evaluate the effects of water temperature, water discharge, filter pore size, water volume filtered, number of samples collected, timing, and primers on the probability of detecting eDNA from fish species known to be present. We detected eDNA from 13/15 species present in these areas of the Snake River. Overall, we did not find evidence that filter pore size, water volume filtered, water discharge, and water temperature affected the probability of detecting fish species’ eDNA . By contrast, primers and sampling day affected fish detection probabilities, indicating that primer choice and sampling day can either over- or under- estimate species diversity. These results indicate that users would ideally consider sampling on non-consecutive days and which primer set will maximize species detections.

Metabarcoding & Metagenomics↗

USGS2009

Factors affecting the age-C resident fish community along shorelines of the Hanford Reach of the Columbia River

The Hanford Reach is one of the few remaining unimpounded sections of the Columbia River. However, because of flow management at upstream dams, there are often large fluctuations in water level. To determine how environmental conditions might affect age-0 resident fishes in the Hanford Reach, we evaluated species composition, distribution, abundance, and standard lengths of larval and juvenile fishes along shoreline habitats during July and August 1998, 1999, and 2000. Catches in beach seine hauls during all three years were highly variable. The four most abundant taxa collected were three cyprinids, peamouth (Mylocheilus caurinus), northern pikeminnow (Plychocheilus oregonensis), and redside shiner (Richardson ius balteatus); and suckers (Catostoinus spp.). Highest overall catches were in sloughs of the Hanford Reach in 1999, a year with high flows, lower water level fluctuations, and more vegetation. Mean shoreline summer water temperatures were higher in 1998 than in 1999 and 2000, and mean lengths of the four most abundant taxa in late August were also greater in 1998, due presumably to enhanced growth or an earlier spawning season. In spite of flow fluctuations, overall catches of age-0 resident fishes were greater in the riverine Hanford Reach compared to past catches in a more lentic Columbia River reservoir. High abundances of age-0 resident fishes in the Hanford Reach could be due to more spawning and rearing habitat in this structurally complex area, and may mitigate for negative effects of variable flow regimes.

Northwest Science↗

USGS2015

Impact of fishing and stocking practices on Coregonid diversity

Fish species diversity can be lost through interacting stressors including habitat loss, stocking and overfishing. Although a multitude of stressors have played a role in the global decline of coregonid (Coregonus spp.) diversity, a number of contemporary studies have identified habitat loss stemming from eutrophication as the primary cause. Unfortunately, reconstructing the role of fishing and stocking practices can be difficult, because these records are incomplete or appear only in hard-to-access historic grey literature. Based on an illustrative set of historic and contemporary studies, we describe how fisheries management practices may have contributed to coregonid diversity loss in European and North American lakes. We provide case studies examining how fishing and stocking may reduce coregonid diversity through demographic decline and introgressive hybridization. In some lakes, fisheries management practices may have led to a loss of coregonid diversity well before issues with habitat degradation manifested. Our review suggests that fish conservation policies could beneficially consider the relative importance of all stressors, including management practices, as potential drivers of diversity loss.

Great Lakes, Lake Constance, Lake Geneva, Lake Gre↗

USGS2012

Techniques for telemetry transmitter attachment and evaluation of transmitter effects on fish performance: Chapter 4

One assumption of nearly every biotelemetry study is that the tagged animals are representative of the untagged population. That is, that the processes by which study animals are captured, handled, and tagged, as well as the act of carrying a transmitter, will have minimal effect on their behavior and performance. This assumption, commonly stated as a lack of transmitter effects, must be valid if telemetry studies are to describe accurately the movements and behavior of an entire population of interest, rather than only of a subset of that population. Considering the sequence of events necessary to implement telemetry studies (i.e., collection, handling, transmitter attachment), as well as the intrusive nature of many transmitter attachment techniques, it is likely that there will be some effect on the study animals. These potential impacts can range from mild to severe, from transitory to permanent, and may be manifest immediately or not for several days to weeks after tagging. Direct physical impacts can include elevated stress levels, injury, or even death (Knights and Lasee 1996; Jepsen et al. 2001; Lacroix et al. 2004). Interrupted integrity of the scales, mucus, or skin can place fish at increased risk of infection (Mellas and Haynes 1985; Swanberg et al. 1999; Bauer et al. 2005; Harms 2005). Effects on fish behavior include altered buoyancy compensation ability (Gallepp and Magnuson 1972; Fried et al. 1976), reduced swimming performance (McCleave and Stred 1975; Counihan and Frost 1999; Makiguchi and Ueda 2009), reduced feeding, or changes in dominance status (Greenstreet and Morgan 1989; Armstrong and Rawlings 1993; Welch et al. 2007). Changes in behavior such as these can affect a fish’s growth, rate of maturation or migration, or increase its vulnerability to predation. At some level, these transmitter effects will be present in nearly every study using telemetry and if substantial, they can violate the critical assumption that tagged fish are representative of the untagged population.

Book chapter↗

USGS2023

Fish community characterization of mid-shelf and shelf-edge mesophotic coral ecosystems in the expanded Flower Garden Banks National Marine Sanctuary

The mid to outer continental shelf in the northern Gulf of Mexico is composed of a patchy distribution of coral and rock reefs designated high priority for marine protection. To better understand the influence of deepwater habitat on fish community dynamics and conservation needs, we compared altiphotic-mesophotic transition (20– 40 m), upper mesophotic (40–60 m), and middle mesophotic (60–80 m) fish communities between mid-shelf (Sonnier Bank) and outer-shelf (McGrail Bank) banks from before their inclusion into the Flower Garden Banks National Marine Sanctuary. Surveys performed over two years with a remotely operated vehicle indicated that each bank and depth zone had distinct fish communities. Both banks were dominated by planktivores and piscivores, with an increase in depth specialists (e.g., deepwater anthiids and serranids) at the deeper zones surveyed, particularly in middle mesophotic depths at McGrail. An increased frequency of snappers, groupers, and amberjack was observed at Sonnier Bank, predominately in mesophotic depths, indicating the Sonnier Mesophotic Coral Ecosystem as either a hotspot or potential refuge for meso- and apex predators. This study fills a temporal gap in fish community dynamics of these two banks, serving to create a more continuous dataset available to assist in conservation assessments of the Flower Garden Banks National Marine Sanctuary.

Texas↗

USGS2019

Evaluation of a method for quantifying eugenol concentrations in the fillet tissue from freshwater fish species

AQUI-S 20E ® (active ingredient, eugenol; AQUI-S New Zealand Ltd, Lower Hutt, New Zealand) is being pursued for approval as an immediate-release sedative in the United States. A validated method to quantify the primary residue (the marker residue) in fillet tissue from AQUI-S 20E–exposed fish was needed. A method was evaluated for determining concentrations of the AQUI-S 20E marker residue, eugenol, in freshwater fish fillet tissue. Method accuracies from fillet tissue fortified at nominal concentrations of 0.15, 1, and 60 μg/g from six fish species ranged from 88–102%. Within-day and between-day method precisions (% CV) from the fortified tissue were ≤8.4% CV. There were no coextracted compounds from the control fillet tissue of seven fish species that interfered with eugenol analyses. Six compounds used as aquaculture drugs did not interfere with eugenol analyses. The lower limit of quantitation (LLOQ) was 0.012 μg/g. The method was robust, i.e., in most cases, minor changes to the method did not impact method performance. Eugenol was stable in acetonitrile–water (3 + 7, v/v) for at least 14 days, in fillet tissue extracts for 4 days, and in fillet tissue stored at ~ −80°C for at least 84 days.

Journal of AOAC International↗

USGS2025

Fish-assemblage evaluation in the lower Sandusky River, Ohio, following dam removal

The Sandusky River, Ohio, USA, has experienced more than a century of alterations, including dam implementation and removal, causing a cascade of habitat changes. The physical changes in the river led to establishment of several invasive species. Ten hoop-net sampling sites, spaced about 500 m apart were established in the river to monitor fish assemblage and their habitat preferences. Four 10-d sampling events were completed from April through October 2021. Ordination analyses were used to assess fish-assemblage structure seasonably, species-habitat relationships, and life-history strategies of 31 species. Generalized linear mixed-effects models were used to assess temporal factors that may drive diversity and community assemblage. Models indicated increased species richness after removal of the dam. Presence and proportion of catch data were compared to Ohio Environmental Protection Agency 2009 pre-dam-removal data to further assess changes in fish assemblage. Several species, especially catostomids, have begun to use the habitat downstream of the former dam, altering fish assemblage throughout the river. We expect shifts in assemblage structure to persist, making continued monitoring essential for understanding how non-native and recreationally important species continue to respond to dam removal.

Ohio↗

USGS1970

Chemotherapy of fish diseases: A review

Fish suffer from environmental, nutritional, viral, bacterial, parasitic, and neoplastic diseases, many of which are similar to those of higher animals. The prevention and treatment of these diseases follow the same principles as diseases of other animals. Fish culture is similar to poultry husbandry in that large numbers of animals are crowded into relatively small areas, feeding is free choice, and medication for systemic infections is usually oral. External treatment of fishes is more common than of poultry, due to a higher frequency of external diseases. Many of the drugs and chemicals used in chemotherapy of fishes are the same as for higher animals. The following is a brief review of the more important drugs and their methods of administration.

Journal of Wildlife Diseases↗

USGS1941

Bathymetric distribution of fish in lakes of the northeastern highlands, Wisconsin

The present study of the bathymetric distribution of fish in the lakes of northeastern Wisconsin has been based on records of the catches of gill nets fished during the summers of 1930, 1931 and 1932. During the first of the three summers, soundings were made only of the general area in which each gang of nets was fished. In 1931 and 1932, however, individual records were made of the depths from which almost all of the nets were lifted. The more exact data obtained in these two years form the basis for most of the material that will be presented, a!though some references will be made to the fishing operations of 1930.

Transactions of the Wisconsin Academy of Sciences,↗

USGS1990

Use of fish corrals in the seine fishery of the Virgin Islands

Although selected aspects of the commercial fishery in the Virgin Islands have been documented since the early 1930's, fish corrals and their use have not been described. This account, based on personal observations made during 1985-86, summarizes commercial fishing methods in the Virgin Islands (U.S. and British), documents the use of fish corrals, and serves as an introduction to the methodologies of this harvesting technique. Interviews of commercial fishermen about how and when fish corrals are used provided information not available from direct observation.

Marine Fisheries Review↗

USGS2004

Type C botulism in pelicans and other fish-eating birds at the Salton Sea

In 1996, type C avian botulism killed over 10,000 pelicans and nearly 10,000 other fish-eating birds at the Salton Sea in southern California. Although botulism had been previously documented in waterbirds at the Sea, this die-off was unusual in that it involved primarily fish-eating birds. The American White Pelican ( Pelecanus erythrorynchos ) was the species with the greatest mortality in 1996. Since 1996, mortality has recurred every year but losses have declined (<2,000 birds/year), with relatively more Brown Pelicans ( P. occidentalis ) than White Pelicans afflicted. In 2000, morbidity and mortality of Brown Pelicans with type C botulism (1311) approached the numbers afflicted in 1996 (2034). In recent years, mortality reached a peak earlier in the summer, July and August, in contrast to 1996 when mortality reached a peak in September. An exotic fish species, tilapia ( Oreochromis mossambicus ), has been implicated as the source of toxin for birds at Salton Sea, but the source of toxin for fish is unknown.

California↗

USGS1996

Seasonal bathymetric distributions of 16 fishes in Lake Superior, 1958-75

The bathymetric distributions of fishes in Lake Superior, which is one of the largest and deepest lakes in the world, has not been studied on a lakewide scale. Knowledge about the bathymetric distributions will aid in designing fish sampling programs, estimating absolute abundances, and modeling energy flow in the lake. Seasonal bathymetric distributions were determined , by 10-m depth intervals, for 16 fishes collected with bottom trawls and bottom-set gill nets within the upper 150 m of Lake Superior during 1958-75. In spring trawl catches, maximum abundance occurred at these depths: 15 m for round whitefish (Prosopium cylindraceum); 25m for longnose sucker (Catostomus catostomus); 35 m for lake whitefish (Coregonus clupeaformis) and rainbow smelt (Osmerus mordax); 45 m for lake trout (Salvelinus namaycush); 65 m for pygmy whitefish (Prospoium coulteri) and bloater (Coregonus hoyi); 75 m for trout- perch (Percopsis omiscomaycus); 105 m for shortjaw cisco (Coregonus zenithicus); and 115 m for ninespine stickleback (Pungitius pungitius), burbot (Lota lota), slimy sculpin (Cottus cogantus), spoonhead sculpin (Cottus ricei), and deepwater sculpin (Myoxcephalus thompsoni). Bathymetric distributions in spring gill nets were similar to those in trawls, except that depths of maximum abundances in gill nets were shallower than those in trawls for lake trout, rainbow smelt, longnose sucker, and burbot. Lake herring (Coregonus artedi) and kiyi (Coregonus kiyi) were rarely caught in trawls, and their maximum abundances in spring gill net collections were at depths of 25 and 145 m, respectively. In summer, pygmy whitefish, shortjaw cisco, lake herring, kiyi, longnose sucker, burbot, ninespine stickleback, trout-perch, slimy sculpin, and spponhead sculpin were at shallower depths than in spring, whereas rainbow smelt were found in deeper water; there was no change for other species. In fall, shortjaw cisco was at shallower depths than in summer, whereas the remaining species were found deeper, except for lake whitefish and lake trout whose modal depths did not change. Distributions of lake trout and lake whitefish were analyzed by age group, and the young (ages 1-3) of both species were often found in shallower water than were older fish. The shallow-water species exhibited little seasonal changes in bathymetric distributions, whereas the species that inhabited the middepths of deeper water generally moved shallower as the seasons progressed. Most of the more pronounced seasaonl changes in bathymetric distribution were associated with spawning movements.

Biological Science Report↗

USGS1997

Ecotoxicology of aluminum to fish and wildlife

The toxicity of aluminum has been studied extensively in fish, less so in invertebrates, amphibians, and birds, and not at all in reptiles and free-ranging mammals. For aquatic organisms, Al bioavailability and toxicity are intimately related to ambient pH; changes in ambient acidity may affect Al solubility, dissolved Al speciation, and organism sensitivity to Al. At moderate acidity (pH 5.5 to 7.0), fish and invertebrates may be stressed due to Al adsorption onto gill surfaces and subsequent asphyxiation. At pH 4.5 to 5.5, Al can impair ion regulation and augment the toxicity of H+. At lower pH, elevated Al can temporarily ameliorate the toxic effects of acidity by competing for binding sites with H+. Aluminum toxicity in aquatic environments is further affected by the concentration of ligands such as dissolved organic matter, fluoride, or sulfate, and of other cations such as Ca and Mg which compete for cellular binding sites. Although risk of Al toxicity is often based on a model of free-ion (Al3+) activity, recent evidence suggests that factors determining Al toxicity may be more complex. In general, aquatic invertebrates are less sensitive to Al toxicity and acidity than fish; thus acidified, Al-rich waters may actually reduce predation pressure. Fish may be affected by asphyxiation at moderate acidic conditions or electrolyte imbalances at lower pH. In amphibians, embryos and young larvae are typically more sensitive than older larvae. Early breeding amphibians, which lay eggs in ephemeral ponds and streams subject to spring runoff, are most at risk from Al and acidification; those that breed later in the year in lakes or rivers are least vulnerable. Birds and mammals are most likely exposed through dietary ingestion of soil or Al-contaminated foods. Concentrations > 1000 mg.kg-1 in food may be toxic to young birds and mammals. Clinical signs in these animals are consistent with rickets because Al precipitates with P in the gut. Suggestions for additional research on the ecotoxicology of Al to wild animals are provided.

Book chapter↗