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USGS2025

Effects of chronic metal exposure and metamorphosis on the microbiomes of larval and adult insects and riparian spiders through the aquatic-riparian food web

The macroinvertebrate microbiome controls various aspects of the host's physiology, from regulation of environmental contaminants to reproductive output. Aquatic insects provide critical nutritional subsidies linking aquatic and riparian food webs while simultaneously serving as a contaminant pathway for riparian insectivores in polluted ecosystems. Previous studies have characterized the transport and transfer of contaminants from aquatic to riparian ecosystems through insect metamorphosis, but both contaminant exposure and metamorphosis are energetically intensive processes that may cause host microbiomes to undergo radical transformation in structure and function, potentially affecting the host's physiology. We collected arthropods from three sites within Torch Lake, a historical copper mine in the Keweenaw Peninsula, Michigan, USA, and three sites within a nearby reference lake. Our objectives were to: 1) characterize the variation in microbiome communities and predicted metagenomic functions with legacy copper mining activity across space, among host types and family-level host taxonomy, 2) characterize how insect metamorphosis alters the microbiome community, including the degree of endosymbiotic infection, and predicted metagenomic function. We field-collected organisms, extracted their DNA, and sequenced the 16S region of the rRNA gene to characterize microbiome communities, then predicted metagenomic function. Site, lake, and host taxonomy affected the host microbiome community composition. Copper exposure increased the abundance of xenobiotic and lipid metabolism pathways in the Araneidae spider microbiome. Insect metamorphosis reduced the alpha diversity, altered the community composition, and predicted metagenomic function. We observed a bioconcentration of endosymbiotic bacteria in adult insects, especially holometabolous insects. Through metamorphosis, we observed a transition in function from xenobiotic degradation pathways to carbohydrate metabolism. Overall, contaminant exposure alters the microbiome composition in aquatic insects and riparian spiders and alters the function of the microbiome across the aquatic-riparian interface. Furthermore, metamorphosis is a critical element in shaping the aquatic insect microbiome across its life history.

Michigan↗

USGS2016

Flow management for hydropower extirpates aquatic insects, undermining river food webs

Dams impound the majority of rivers and provide important societal benefits, especially daily water releases that enable on-peak hydroelectricity generation. Such “hydropeaking” is common worldwide, but its downstream impacts remain unclear. We evaluated the response of aquatic insects, a cornerstone of river food webs, to hydropeaking using a life history–hydrodynamic model. Our model predicts that aquatic-insect abundance will depend on a basic life-history trait—adult egg-laying behavior—such that open-water layers will be unaffected by hydropeaking, whereas ecologically important and widespread river-edge layers, such as mayflies, will be extirpated. These predictions are supported by a more-than-2500-sample, citizen-science data set of aquatic insects from the Colorado River in the Grand Canyon and by a survey of insect diversity and hydropeaking intensity across dammed rivers of the Western United States. Our study reveals a hydropeaking-related life history bottleneck that precludes viable populations of many aquatic insects from inhabiting regulated rivers.

BioScience↗

USGS2023

Food web changes reflected in age-0 piscivore diets and growth

Lake Erie walleye ( Stizostedion vitreum ) recruitment fluctuates annually and depends partially on their diet and growth during their first year of life. In recent decades, age-0 walleye diet and growth may be responding to food web changes in western Lake Erie. To determine how age-0 walleye have responded to changes in prey species and abundance, we compared diet between 2019, 2014 and 1994–1999. Larval walleye ate predominantly cyclopoids in 2019, compared to 1994–1999 when calanoids were the most consumed copepod. Juvenile walleye ate predominantly large cladocerans and benthic invertebrates in 2019, compared to 2014 and 1994 when fish was the most consumed prey. Additionally, in 2019 and 2014, age-0 walleye ate two of the current aquatic invasive species (AIS), Bythotrephes longimanu s and Neogobius melanostomus , and the historical AIS, Osmerus mordax . Age-0 walleye were smaller in 2019 than in 2014 and switched to consuming more AIS and less fish suggesting that more energetically favourable prey were not available. While age-0 walleye showed adaptation to new prey and conditions, they had a lower quality diet because they consumed less fish, but also because the invasive fish they now consume have a lower energy density than native species. However, lower quality diet and size may not result in reduced survival, if adequate alternative prey is available. Continued monitoring of age-0 walleye diet could provide confirmation that lower diet quality during the first year decreased walleye growth and aid to identify any effects changes in age-0 diets has on recruitment to the adult population.

Michigan, Ohio↗

USGS2000

Accumulation and fate of mercury in an Everglades aquatic food web

This project examined the pathways of mercury (Hg) bioaccumulation and its relation to trophic position and hydroperiod in the Everglades. I described fish-diet differences across habitats and seasons by analyzing stomach contents of 4,000 fishes of 32 native and introduced species. Major foods included periphyton, detritus/algal conglomerate, small invertebrates, aquatic insects, decapods, and fishes. Florida gar, largemouth bass, pike killifish, and bowfin were at the top of the piscine food web. Using prey volumes, I quantitatively classified the fishes into trophic groups of herbivores, omnivores, and carnivores. Stable-isotope analysis of fishes and invertebrates gave an independent and similar assessment of trophic placement. Trophic patterns were similar to those from tropical communities. I tested for correlations of trophic position and total mercury. Over 4,000 fish, 620 invertebrate, and 46 plant samples were analyzed for mercury with an atomic-fluorescence spectrometer. Mercury varied within and among taxa. Invertebrates ranged from 25–200 ng g −1 ww. Small-bodied fishes varied from 78–>400 ng g −1 ww. Large predatory fishes were highest, reaching a maximum of 1,515 ng −1 ww. Hg concentrations in both fishes and invertebrates were positively correlated with trophic position. I examined the effects of season and hydroperiod on mercury in wild and caged mosquitofish at three pairs of marshes. Nine monthly collections of wild mosquitofish were analyzed. Hydroperiod-within-site significantly affected concentrations but it interacted with sampling period. To control for wild-fish dispersal, and to measure in situ uptake and growth, I placed captive-reared, neonate mosquitofish with mercury levels from 7–14 ng g −1 ww into field cages in the six study marshes in six trials. Uptake rates ranged from 0.25–3.61 ng g −1 ww d −1 . As with the wild fish, hydroperiod-within-site was a significant main effect that also interacted with sampling period. Survival exceeded 80%. Growth varied with season and hydroperiod, with greatest growth in short-hydroperiod marshes. The results suggest that dietary bioaccumulation determined mercury levels in Everglades aquatic animals, and that, although hydroperiod affected mercury uptake, its effect varied with season.

Thesis↗

USGS2020

Hydrodynamics drive pelagic communities and food web structure in a tidal environment

Hydrodynamic processes can lead to the accumulation and/or dispersal of water column constituents, including sediment, phytoplankton, and particulate detritus. Using a combination of field observations and stable isotope tracing tools, we identified how hydrodynamic processes influenced physical habitat, pelagic communities, and food web structure in a freshwater tidal system. The pelagic habitat of a terminal channel differed spatially, likely aligning with differences in hydrodynamics. Three zones that we classified by exchange with downstream habitat had distinct water quality characteristics, supported different densities of zooplankton and nekton, and exhibited disparate support from benthic and pelagic trophic pathways to pelagic consumers. Hydrodynamically driven zones and their emergent characteristics appeared sensitive to hydrology, as elevated runoff was correlated with a shift in hydrodynamic habitat and organismal distributions. The results of our study highlight the relationship between hydrodynamic processes, biological responses, and climate, and suggest that understanding the physical process can improve understanding of pelagic habitats and communities.

California↗

USGS2023

Pelagic food web interactions in a large invaded ecosystem: Implications for reintroducing a native top predator

A series of species introductions, overexploitation, and habitat modification preceded the extirpation of Lahontan cutthroat trout ( Oncorhynchus clarkii henshawi; LCT), historically the apex predator, from Lake Tahoe, California-Nevada, USA. Studies evaluating limiting factors for LCT emphasise the need to elucidate food web interactions, yet important knowledge gaps regarding trophic interactions among nonnative pelagic fishes and invertebrates remain. We quantified the abundance and consumption demand of planktivores with an emphasis on kokanee ( Oncorhynchus nerka ) and Mysis diluviana . We synthesised this new information with existing information for lake trout ( Salvelinus namaycush ). The seasonal supply of copepods satisfied the consumption demand of kokanee, but only supported low feeding and growth rates. Kokanee relied heavily on Mysis as prey, an unusual result. Mysis exhibited a high degree of herbivory initially followed by heavier consumption on copepods by larger individuals. Consumption demand for Mysis on copepods exceeded that of kokanee during all seasons. Mysis contributed to over 50% of the annual energy budget for lake trout up to 625 mm. Consumption of Mysis by lake trout and kokanee represented a significant source of mortality when compared to the production of Mysis . Predation on kokanee was sustainable, only involved lake trout >625 mm, and was focused on prespawning aggregations. Despite the presence of Mysis -fueled lake trout, kokanee have persisted; a noteworthy pattern when considering the negative responses of kokanee to nonnative lake trout and Mysis observed elsewhere. This pattern suggests that there may still be an effective niche for LCT in the invaded Lake Tahoe ecosystem.

California, Nevada↗

USGS2000

Food-web dynamics and trophic-level interactions in a multispecies community of freshwater unionids

We compared feeding habits and trophic-level relationships of unionid species in a detritus-dominated river and an alga-dominated lake using biochemical analyses, gut contents, and stable-isotope ratios. The δ 13 C ratios for algae and other food-web components show that all unionids from both the river and the lake used bacterial carbons, not algal carbons, as their main dietary source, in spite of positive selection and concentration of diatoms and green algae from the water column in the gut and mantle cavity. Algae did provide key nutrients such as vitamins A and D and phytosterols that were bioaccumulated in the tissues of all species. The δ 15 N ratios for the multispecies unionid community in the Huron River indicated some differences in nitrogen enrichment between species, the greatest enrichment being found in Pyganadon grandis . These δ 15 N ratios indicate that unionids may not always feed as primary consumers or omnivores. Stable-isotope data were critical for delineating diets and trophic-level interactions of this group of filter-feeders. Further refinements in identifying bacterial and picoplankton components of the fine particulate organic matter are needed to complete our understanding of resource partitioning between multispecies unionid populations.

Canadian Journal of Zoology↗

USGS2004

Light dependence of selenium uptake by phytoplankton and implications for predicting selenium incorporation into food webs

The potentially toxic element selenium is first concentrated from solution to a large but highly variable degree by algae and bacteria before being passed on to consumers. The large loads of abiotic and detrital suspended particles often present in rivers and estuaries may obscure spatial and temporal patterns in Se concentrations at the base of the food web. We used radiotracers to estimate uptake of both selenite (Se(IV)) and C by intact plankton communities at two sites in the Sacramento/San Joaquin River Delta. Our goals were to determine (1) whether C and Se(IV) uptake were coupled, (2) the role of bacteria in Se(IV) uptake, and (3) the Se:C uptake ratio of newly produced organic material. Se(IV) uptake, like C uptake, was strongly related to irradiance. The shapes of both relationships were very similar except that at least 42-56% of Se(IV) uptake occurred in the dark, whereas C uptake in the dark was negligible. Of this dark Se(IV) uptake, 34-67% occurred in the 0.2-1.0-??m size fraction, indicating significant uptake by bacteria. In addition to dark uptake, total Se(IV) uptake consisted of a light-driven component that was in fixed proportion to C uptake. Our estimates of daily areal Se(IV):C uptake ratios agreed very well with particulate Se:C measured at a site dominated by phytoplankton biomass. Estimates of bacterial Se:C were 2.4-13 times higher than for the phytoplankton, suggesting that bacteriovores may be exposed to higher dietary Se concentrations than herbivores.

Limnology and Oceanography↗

USGS2003

Selenium in San Francisco Bay zooplankton: Potential effects of hydrodynamics and food web interactions

The potential toxicity of elevated selenium (Se) concentrations in aquatic ecosystems has stimulated efforts to measure Se concentrations in benthos, nekton, and waterfowl in San Francisco Bay (SF Bay). In September 1998, we initiated a 14 mo field study to determine the concentration of Se in SF Bay zooplankton, which play a major role in the Bay food web, but which have not previously been studied with respect to Se. Monthly vertical plankton tows were collected at several stations throughout SF Bay, and zooplankton were separated into two operationally defined size classes for Se analyses: 73-2,000 ??m, and ???2,000 ??m. Selenium values ranged 1.02-6.07 ??g Se g-1 dry weight. No spatial differences in zooplankton Se concentrations were found. However, there were inter- and intra-annual differences. Zooplankton Se concentrations were enriched in the North Bay in Fall 1999 when compared to other seasons and locations within and outside SF Bay. The abundance and biovolume of the zooplankton community varied spatially between stations, but not seasonally within each station. Smaller herbivorous-omnivorous zooplankton had higher Se concentrations than larger omnivorous-carnivorous zooplankton. Selenium concentrations in zooplankton were negatively correlated with the proportion of total copepod biovolume comprising the large carnivorous copepod Tortanus dextrilobatus, but positively correlated with the proportion of copepod biovolume comprising smaller copepods of the family Oithonidae, suggesting an important role of trophic level and size in regulating zooplankton Se concentrations.

Estuaries↗

USGS2014

Lake Michigan offshore ecosystem structure and food web changes from 1987 to 2008

Ecosystems undergo dynamic changes owing to species invasions, fisheries management decisions, landscape modifications, and nutrient inputs. At Lake Michigan, new invaders (e.g., dreissenid mussels ( Dreissena spp.), spiny water flea ( Bythotrephes longimanus ), round goby ( Neogobius melanostomus )) have proliferated and altered energy transfer pathways, while nutrient concentrations and stocking rates to support fisheries have changed. We developed an ecosystem model to describe food web structure in 1987 and ran simulations through 2008 to evaluate changes in biomass of functional groups, predator consumption, and effects of recently invading species. Keystone functional groups from 1987 were identified as Mysis , burbot ( Lota lota ), phytoplankton, alewife ( Alosa pseudoharengus ), nonpredatory cladocerans, and Chinook salmon (Oncorhynchus tshawytscha ). Simulations predicted biomass reductions across all trophic levels and predicted biomasses fit observed trends for most functional groups. The effects of invasive species (e.g., dreissenid grazing) increased across simulation years, but were difficult to disentangle from other changes (e.g., declining offshore nutrient concentrations). In total, our model effectively represented recent changes to the Lake Michigan ecosystem and provides an ecosystem-based tool for exploring future resource management scenarios.

Lake Michigan↗

USGS2016

Seasonal variation exceeds effects of salmon carcass additions on benthic food webs in the Elwha River

Dam removal and other fish barrier removal projects in western North America are assumed to boost freshwater productivity via the transport of marine-derived nutrients from recolonizing Pacific salmon ( Oncorhynchus spp.). In anticipation of the removal of two hydroelectric dams on the Elwha River in Washington State, we tested this hypothesis with a salmon carcass addition experiment. Our study was designed to examine how background nutrient dynamics and benthic food webs vary seasonally, and how these features respond to salmon subsidies. We conducted our experiment in six side channels of the Elwha River, each with a spatially paired reference and treatment reach. Each reach was sampled on multiple occasions from October 2007 to August 2008, before and after carcass placement. We evaluated nutrient limitation status; measured water chemistry, periphyton, benthic invertebrates, and juvenile rainbow trout ( O. mykiss ) response; and traced salmon-derived nutrient uptake using stable isotopes. Outside of winter, algal accrual was limited by both nitrogen and phosphorous and remained so even in the presence of salmon carcasses. One month after salmon addition, dissolved inorganic nitrogen levels doubled in treatment reaches. Two months after addition, benthic algal accrual was significantly elevated. We detected no changes in invertebrate or fish metrics, with the exception of 15 N enrichment. Natural seasonal variability was greater than salmon effects for the majority of our response metrics. Yet seasonality and synchronicity of nutrient supply and demand are often overlooked in nutrient enhancement studies. Timing and magnitude of salmon-derived nitrogen utilization suggest that uptake of dissolved nutrients was favored over direct consumption of carcasses. The highest proportion of salmon-derived nitrogen was incorporated by herbivores (18–30%) and peaked 1–2 months after carcass addition. Peak nitrogen enrichment in predators (11–16%) occurred 2–3 months after addition. All taxa returned to background δ 15 N levels by 7 months. Since this study was conducted, both dams on the Elwha River were removed over 2011–2014 to open over 90% of the basin to anadromous fishes. We anticipate that as the full portfolio of salmon species expands through the basin, nutrient supply and demand will come into better balance.

Ecosphere↗

USGS2015

Trophic ontogeny of fluvial Bull Trout and seasonal predation on Pacific Salmon in a riverine food web

Bull Trout Salvelinus confluentus are typically top predators in their host ecosystems. The Skagit River in northwestern Washington State contains Bull Trout and Chinook Salmon Oncorhynchus tshawytscha populations that are among the largest in the Puget Sound region and also contains a regionally large population of steelhead O. mykiss (anadromous Rainbow Trout). All three species are listed as threatened under the Endangered Species Act (ESA). Our objective was to determine the trophic ecology of Bull Trout, especially their role as predators and consumers in the riverine food web. We seasonally sampled distribution, diets, and growth of Bull Trout in main-stem and tributary habitats during 2007 and winter–spring 2008. Consumption rates were estimated with a bioenergetics model to (1) determine the annual and seasonal contributions of different prey types to Bull Trout energy budgets and (2) estimate the potential impacts of Bull Trout predation on juvenile Pacific salmon populations. Salmon carcasses and eggs contributed approximately 50% of the annual energy budget for large Bull Trout in main-stem habitats, whereas those prey types were largely inaccessible to smaller Bull Trout in tributary habitats. The remaining 50% of the energy budget was acquired by eating juvenile salmon, resident fishes, and immature aquatic insects. Predation on listed Chinook Salmon and steelhead/Rainbow Trout was highest during winter and spring (January–June). Predation on juvenile salmon differed between the two study years, likely due to the dominant odd-year spawning cycle for Pink Salmon O. gorbuscha . The population impact on ocean- and stream-type Chinook Salmon was negligible, whereas the impact on steelhead/Rainbow Trout was potentially very high. Due to the ESA-listed status of Bull Trout, steelhead, and Chinook Salmon, the complex trophic interactions in this drainage provide both challenges and opportunities for creative adaptive management strategies.

Washington↗

USGS2000

Ecogeochemistry of the subsurface food web at pH 0–2.5 in Iron Mountain, California, U.S.A.

Pyrite oxidation in the underground mining environment of Iron Mountain, California, has created the most acidic pH values ever reported in aquatic systems. Sulfate values as high as 120 000 mg l −1 and iron as high as 27 600 mg l −1 have been measured in the mine water, which also carries abundant other dissolved metals including Al, Zn, Cu, Cd, Mn, Sb and Pb. Extreme acidity and high metal concentrations apparently do not preclude the presence of an underground acidophilic food web, which has developed with bacterial biomass at the base and heliozoans as top predators. Slimes, oil-like films, flexible and inflexible stalactites, sediments, water and precipitates were found to have distinctive communities. A variety of filamentous and non-filamentous bacteria grew in slimes in water having pH values <1.0. Fungal hyphae colonize stalactites dripping pH 1.0 water; they may help to form these drip structures. Motile hypotrichous ciliates and bdelloid rotifers are particularly abundant in slimes having a pH of 1.5. Holdfasts of the iron bacterium Leptothrix discophora attach to biofilms covering pools of standing water having a pH of 2.5 in the mine. The mine is not a closed environment – people, forced air flow and massive flushing during high intensity rainfall provide intermittent contact between the surface and underground habitats, so the mine ecosystem probably is not a restricted one.

California↗

USGS2019

Examination of Bathymodiolus childressi nutritional sources, isotopic niches, and food-web linkages at two seeps in the US Atlantic margin using stable isotope analysis and mixing models

Chemosynthetic environments support distinct benthic communities capable of utilizing reduced chemical compounds for nutrition. Hundreds of methane seeps have been documented along the U.S. Atlantic margin (USAM), and detailed investigations at a few seeps have revealed distinct environments containing mussels, microbial mats, authigenic carbonates, and soft sediments. The dominant mussel, Bathymodiolus childressi , contains methanotrophic endosymbionts but is also capable of filter feeding, and stable isotope analysis (SIA) of mussel-shell periostracum suggests that these mussels are mixotrophic, assimilating multiple food resources. However, it is unknown whether mixotrophy is widespread or varies spatially and temporally. We used SIA (δ 13 C, δ 15 N, and δ 34 S) and an isotope mixing model (MixSIAR) to estimate resource contribution to B. childressi and characterize food webs at two seep sites (Baltimore Seep; 400 m and Norfolk Seep; 1500 m depths) along the USAM, and applied a linear mixed-effects model to explore the role of mussel population density and tissue type in influencing SIA variance. After controlling for location and temporal variation, isotopic variability was a function of proportion of live mussels present and tissue type. Isotopic differences were also spatially discrete, possibly reflecting variations in the underlying carbon source at the two sites. Low mussel δ 13 C values (∼−63‰) are consistent with a dependence on microbial methane. However, MixSIAR results revealed mixotrophy for mussels at both sites, implying a reliance on a mixture of methane and phytoplankton-derived particulate organic material. The mixing model results also reveal population density-driven patterns, suggesting that resource use is a function of live mussel abundance. Mussel isotopes differed by tissue type, with gill having the lowest δ 15 N values relative to muscle and mantle tissues. Based on mass balance equations, up to 79% of the dissolved inorganic carbon (DIC) of the pore fluids within the anaerobic oxidation of the methane zone is derived from methane and available to fuel upper slope deep-sea communities, such as fishes ( Dysommina rugosa and Symphurus nebulosus ), echinoderms ( Odontaster robustus , Echinus wallisi , and Gracilechinus affinis ), and shrimp, ( Alvinocaris markensis ). The presence of these seeps thereby increases the overall trophic and community diversity of the USAM continental slope. Given the presence of hundreds of seeps within the region, primary production at seeps may serve as an important, yet unquantified, energy source to the USAM deep-sea environment.

Delaware, Maryland, North Carolina, Virginia↗

USGS2024

Consumer isoscapes reveal heterogeneous food webs in deep-sea submarine canyons and adjacent slopes

The deep sea is the largest biome on earth, but one of the least studied despite its critical role in global carbon cycling and climate buffering. Deep-sea organisms largely rely on particulate organic matter from the surface ocean for energy – these organisms in turn play critical roles in energy transport, transformation, storage, and sequestration of carbon. Within the deep sea, submarine canyons are amongst the most complex and dynamic environments in our oceans, where varied morphology, powerful currents, and variable nutrient conditions influence the distribution of species and transport of organic material throughout the water column and the seafloor. Significant habitat heterogeneity provides ideal substrates for cold-water corals, making submarine canyons of interest to conservation and management. However, how these and other topographic features in the deep ocean influence energy flow and trophic pathways is poorly known. Thus, submarine canyons serve as model systems to track variability in organic material flux and consequential utilization and assimilation by the benthos. In this study, we used an extensive stable isotope dataset to examine food-web structure in Baltimore and Norfolk submarine canyons and compared them to their adjacent slopes located along the U.S. Atlantic margin. Linear models were used to construct geospatially-explicit consumer isoscapes that predicted variation in carbon and nitrogen isotopes across the canyon-slope seascape, providing a predictive map from which to test hypotheses on the distribution and flow of energy resources, relevant to understanding whole community function. Communities were composed of isotopically diverse feeding groups with photosynthetically-derived organic carbon providing the basal food resource. Canyon communities were distinct from the slope, with canyon consumers significantly 13 C-depleted, indicating a greater supply and/or utilization of fresh organic matter compared to the slope. Isoscapes for benthic and suspension feeders were distinct, possibly due to the consumption of different quality organic matter sources (fresh = suspension feeders, old = benthic feeders), each with distinct isotope composition. To our knowledge, our modeled isoscapes represent the first spatially extensive isotopic maps of deep-sea consumers, providing insights into regional-scale variation in stable carbon and nitrogen isotopes for different consumer groups. They provide a baseline for tracking climate-change induced fluctuations in the quality and availability of surface primary production and the consequential impact to benthic communities, which play critical roles in carbon cycling in our world’s oceans.

Progress in Oceanography↗

USGS2024

Riparian methylmercury production increases riverine mercury flux and food web concentrations

The production and uptake of toxic methylmercury (MeHg) impacts aquatic ecosystems globally. Rivers can be dynamic and difficult systems to study for MeHg production and bioaccumulation, hence identifying sources of MeHg to these systems is both challenging and important for resource management within rivers and main-stem reservoirs. Riparian zones, which are known biogeochemical hotspots for MeHg production, are understudied as potential sources of MeHg to rivers. Here, we present a comprehensive quantification of the hydrologic and biogeochemical processes governing MeHg concentrations, loads, and bioaccumulation at 16 locations along 164 km of the agriculturally intensive Snake River (Idaho, Oregon USA) during summer baseflow conditions, with emphasis on riparian production of MeHg. Approximately one-third of the MeHg load of the Snake River could not be attributed to inflowing waters (upgradient, tributaries, or irrigation drains). Across the study reach, increases in MeHg loads in surface waters were significantly correlated with MeHg concentrations in riparian porewaters, suggesting riparian zones were likely an important source of MeHg to the Snake River. Across all locations, MeHg concentrations in surface waters positively correlated with MeHg concentrations in benthic snails and clams, supporting that riparian produced MeHg was assimilated into local aquatic food webs. This study contributes new insights into riparian MeHg production within rivers which can inform mitigation efforts to reduce MeHg bioaccumulation in fish.

Idaho, Oregon↗

USGS2013

The effects of juvenile American shad planktivory on zooplankton production in Columbia River food webs

Columbia River reservoirs support a large population of nonnative American Shad Alosa sapidissima that consume the zooplankton that native fishes also rely on. We hypothesized that the unprecedented biomass of juvenile American Shad in John Day Reservoir is capable of altering the zooplankton community if these fish consume a large portion of the zooplankton production. We derived taxon-specific estimates of zooplankton production using field data and a production model from the literature. Empirical daily ration was estimated for American Shad and expanded to population-level consumption using abundance and biomass data from hydroacoustic surveys. Daphnia spp. production was high in early summer but declined to near zero by September as shad abundance increased. American Shad sequentially consumed Daphnia spp., copepods, and Bosmina spp., which tracked the production trends of these taxa. American Shad evacuation rates ranged from 0.09 to 0.24/h, and daily rations ranged from 0.008 to 0.045 g·g −1 ·d −1 (dry weight) over all years. We observed peak American Shad biomass (45.2 kg/ha) in 1994, and daily consumption (1.6 kg/ha) approached 30% (5.3 kg/ha) of zooplankton production. On average, American Shad consumed 23.6% of the available zooplankton production (range, <1–83%). The changes in the zooplankton community are consistent with a top-down effect of planktivory by American Shad associated with their unprecedented biomass and consumption, but the effects are likely constrained by temperature, nutrient flux, and the seasonal production patterns of zooplankton in John Day Reservoir. American Shad add to the planktivory exerted by other species like Neomysis mercedis to reduce the capacity of the reservoir to support other planktivorous fishes. The introduction of American Shad and other nonnative species will continue to alter the food web in John Day Reservoir, potentially affecting native fishes, including Pacific salmon Oncorhynchus spp.

Columbia River↗

USGS2023

Bivalve effects on the food web supporting delta smelt—A long-term study of bivalve recruitment, biomass, and grazing rate patterns with varying freshwater outflow

Phytoplankton are an important and limiting food source in the Sacramento-San Joaquin Delta and San Francisco Bay in California. Decreasing phytoplankton biomass is one possible factor for the pelagic organism decline and the decline of the protected Hypomesus transpacificus (delta smelt). Bivalves Corbicula fluminea and Potamocorbula amurensis (hereafter C. fluminea and P. amurensis , respectively) have been shown to control phytoplankton biomass throughout San Francisco Bay and the Sacramento-San Joaquin Delta; therefore, their distribution and population dynamics are of great interest. We describe the distribution and dynamics of bivalve biomass using samples from California Department of Water Resources’ (DWR) 2019 benthic monitoring program. As one element of DWR’s and the Bureau of Reclamation’s Environmental Monitoring Program (EMP), the DWR benthic monitoring program examines the effect of water project operations on the estuary as prescribed by a series of Water Rights Decisions mandated by the California State Water Resources Control Board (SWRCB). The biomass and grazing rate values of both bivalves had similar patterns, therefore, comments on biomass distribution can be applied to grazing rate data. Biomass and recruitment values of C. fluminea were too low at station C9 (Old River upstream from Clift on Court Forebay Intake) to describe a temporal pattern. Corbicula fluminea biomass values were consistently high at station D24 (Sacramento River). Station D4L (confluence of San Joaquin and Sacramento Rivers) biomass values were low during the first half of the year and high the rest of the year. Corbicula fluminea biomass values at station P8 (San Joaquin River) were the highest and most consistent on that river. Station D16 (San Joaquin River) and station D28A (central delta) biomass values were near zero with a small peak in May. Potamocorbula amurensis biomass values were near zero at station D4L (confluence of San Joaquin and Sacramento Rivers). Biomass values were strongly seasonal at station D6 (Suisun Bay). Station D41 (San Pablo Bay) had the highest P. amurensis biomass values. Station D7 (Grizzly Bay) and station D41A (San Pablo Bay) had low biomass values in January-June or July and maximum biomass values in August. Corbicula fluminea recruits in the Sacramento River stations peaked twice, from January to June and from September to December. At the San Joaquin River stations, C. fluminea recruitment peaked from May to July or August and from November to December. Peak recruit abundance was higher on the Sacramento River than the San Joaquin River. Potamocorbula amurensis recruitment was more seasonal than C. fluminea , with a high number of recruits followed by periods with no recruits. Station D4L had few recruits except in January. Station D6 had low recruitment from January to February, increased in August, and peaked from November to December. Station D7 had fewer recruits than station D6 but had a similar temporal pattern, although winter recruits continued into April instead of February. Station D41 recruits were sparce and present only from May to July. Station D41A had the most recruits from January to July, and again in September.

California↗