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At least 1,567 records · Page 87Linked to original sources
USGS2016

Can the eastern red-backed salamander (Plethodon cinereus) persist in an acidified landscape?

Hardwood forests of eastern North America have experienced decades of acidic deposition, leading to soil acidification where base cation supply was insufficient to neutralize acid inputs. Negative impacts of soil acidity on amphibians include disrupted embryonic development, lower growth rates, and habitat loss. However, some amphibians exhibit intraspecific variation in acid tolerance, suggesting the potential for local adaptation in areas where soils are naturally acidic. The eastern red-backed salamander ( Plethodon cinereus ) is a highly abundant top predator of the northern hardwood forest floor. Early research found that P. cinereus was sensitive to acidic soils, avoiding substrates with pH < 3.8 and experiencing decreased growth rates in acidic habitats. However, recent studies have documented P. cinereus populations in lower pH conditions than previously observed, suggesting some populations may persist in acidic conditions. Here, we evaluated relationships between organic horizon soil pH and P. cinereus abundance, adult health (body size and condition), and microhabitat selection, based on surveys of 34 hardwood forests in northeastern United States that encompass a regional soil pH gradient. We found no associations between soil pH and P. cinereus abundance or health, and observed that this salamander used substrates with pH similar to that available, suggesting that pH does not mediate their fine-scale distributions. The strongest negative predictor of P. cinereus abundance was the presence of dusky salamanders ( Desmognathus spp.), which were most abundant in the western Adirondacks. Our results indicate that P. cinereus occupies a wider range of soil pH than has been previously thought, which has implications for their functional role in forest food webs and nutrient cycles in acid-impaired ecosystems. Tolerance of P. cinereus for more acidic habitats, including anthropogenically acidified forests, may be due to local adaptation in reproductively isolated populations and/or generalist life history traits that allow them to exploit a wider resource niche.

Ecosphere↗
USGS2017

Full annual cycle climate change vulnerability assessment for migratory birds

Climate change is a serious challenge faced by all plant and animal species. Climate change vulnerability assessments (CCVAs) are one method to assess risk and are increasingly used as a tool to inform management plans. Migratory animals move across regions and continents during their annual cycles where they are exposed to diverse climatic conditions. Climate change during any period and in any region of the annual cycle could influence survival, reproduction, or the cues used to optimize timing of migration. Therefore, CCVAs for migratory animals best estimate risk when they include climate exposure during the entire annual cycle. We developed a CCVA incorporating the full annual cycle and applied this method to 46 species of migratory birds breeding in the Upper Midwest and Great Lakes (UMGL) region of the United States. Our methodology included background risk, climate change exposure × climate sensitivity, adaptive capacity to climate change, and indirect effects of climate change. We compiled information about migratory connectivity between breeding and stationary non-breeding areas using literature searches and U.S. Geological Survey banding and re-encounter data. Climate change exposure (temperature and moisture) was assessed using UMGL breeding season climate and winter climate from non-breeding regions for each species. Where possible, we focused on non-breeding regions known to be linked through migratory connectivity. We ranked 10 species as highly vulnerable to climate change and two as having low vulnerability. The remaining 34 species were ranked as moderately vulnerable. In general, including non-breeding data provided more robust results that were highly individualistic by species. Two species were found to be highly vulnerable throughout their annual cycle. Projected drying will have the greatest effect during the non-breeding season for species overwintering in Mexico and the Caribbean. Projected temperature increases will have the greatest effect during the breeding season in UMGL as well as during the non-breeding season for species overwintering in South America. We provide a model for adaptive management of migratory animals in the face of projected climate change, including identification of priority species, research needs, and regions within non-breeding ranges for potential conservation partnerships.

Ecological Applications↗
USGS2018

Patch age since disturbance drives patch dynamics for flycatchers breeding in both reservoir and riverine habitat

Species dependent upon early-successional landscapes often occupy patches at different stages of recovery after disturbance. The demographic processes that drive patch dynamics in these systems have rarely been described but are important for developing effective conservation and management plans, especially when humans have modified the timing and intensity of disturbances that drive regeneration. In riparian systems, disturbance by floods historically initiated plant regeneration, but many rivers are now regulated and stream flows disrupted by dams and reservoirs. We studied the demography and patch dynamics of an endangered, neotropical migrant bird dependent on remnant riparian patches for breeding, the southwestern willow flycatcher ( Empidonax trailli extimus ), over 9 yr at both a riverine and reservoir site in central Arizona. We found that at both sites, number of territories/ha within patches increased for 2–4 yr after colonization and then declined, with several patches abandoned after 6–10 yr. Age of birds increased with patch age, with younger birds in colonizing patches and older, site-faithful birds in older patches, while mean per capita reproductive success did not differ with patch age. Natal dispersal and breeding dispersal were primarily from intermediate-aged patches into either young- or other intermediate-aged patches. At both riverine and reservoir sites, both the number of patches and the number of territorial birds increased over time, with the percentage of territories shifting into younger and younger patches. The type of disturbance driving patch regeneration differed between riverine and reservoir sites (seasonal flooding vs. falling lake levels due to drought), but the demographic patterns did not, indicating that reservoirs can generate patch dynamics similar to those on rivers. Managing stream flows and reservoir levels to maintain disturbance cycles sufficient to generate riparian patches at different stages of regeneration through time would benefit succession-dependent species like the endangered flycatcher we studied, whether those disturbances arise from natural flooding events along free-flowing rivers or through changes in reservoir levels.

Ecosphere↗
USGS2019

To forage or flee: Lessons from an elk migration near a protected area

Alteration of wide-ranging wildlife migrations can drastically impact the structure and function of ecosystems, yet the causes and consequences of shifting migration patterns remain largely unknown. Management decisions made in one portion of a landscape may induce spatial and temporal shifts of wildlife use in another, creating tension among private, state, and federal lands with varying missions. Recent declines in migratory behavior have initiated studies focused primarily on spring migration, but the timing and benefits of autumn migration have received limited attention due to the difficulty in assessing the extreme asynchrony in autumnal events, although nutrition during this time period is crucial to winter survival and reproduction. Here, we used five years of data from 73 female elk (Cervus canadensis) which utilize a landscape managed by 4 federal agencies, a state, and private landowners, to identify the driving factors behind the initiation of fall migration in two subpopulations, one of which migrates to a protected area where hunting is prohibited. Most elk departed summer range prior to frost or snow, with 67% of elk that used the protected area migrating prior to the onset of archery hunting season (1 September), preemptively avoiding risk, while no elk from the other subpopulation left prior to archery season. However, departure from productive summer range prior to frost or snow, nearly two months before vegetation senescence led to an important tradeoff. Early migrants gave up 0.30% of late summer-fall integrated NDVI (iNDVI) per day when they moved to the safety of the protected area, leading to an average difference of 15.81% in iNDVI between an individual departing on 30 August (the mean departure date) versus an individual departing on 1 November. Our results suggest that in areas where migratory ungulates span multiple jurisdictions, the benefits of migratory behavior may be dramatically impacted by unevenly distributed anthropogenic disturbance. As this is a common scenario globally, our work highlights the urgent need to improve our understanding of subtle changes in migratory behavior, both spatially and temporally, which may erode the resilience of migration to future change.

Wyoming↗
USGS2021

Shifting correlations among multiple aspects of weather complicate predicting future demography of a threatened species

Most studies of the ecological effects of climate change consider only a limited number of weather drivers that could affect populations, though we know that multiple weather drivers can simultaneously affect population growth rate. Multiple drivers could simultaneously increase/decrease one vital rate, or one may increase a vital rate while another decreases the same vital rate. Considering the impact of multiple weather drivers on vital rates is particularly important in a changing climate, in which correlations among drivers may not be preserved in the future. We used a long-term dataset on the endangered red-cockaded woodpecker ( Dryobates borealis ) to understand how multiple weather drivers jointly affect survival and reproductive vital rates and then assessed the contributions of individual weather drivers to historical trends in vital rates over time. We found that vital rates were often influenced by more than one weather driver and that weather drivers most commonly exerted opposing effects. For instance, some weather drivers increased vital rates over time, while others acted in the opposite direction, decreasing vital rates over time. Importantly, the historical correlations among weather drivers are almost always projected to change in the future climate, such that future trends in vital rates may not match historical trends. For example, we do not find historical trends in adult survival, but changing correlations among weather drivers could generate future trends in this vital rate. Our work provides an example of how multiple weather drivers can control a variety of vital rates and also illustrates how changes in the correlation structure of weather drivers through time might substantially affect future trends in individual and population performance.

Ecosphere↗
USGS2022

Dietary composition and fatty acid content of giant salmonflies (Pteronarcys californica) in two Rocky Mountain rivers

Many aquatic invertebrates are declining or facing extinction from stressors that compromise physiology, resource consumption, reproduction, and phenology. However, the influence of these common stressors specifically on consumer–resource interactions for aquatic invertebrate consumers is only beginning to be understood. We conducted a field study to investigate Pteronarcys californica (i.e., the “giant salmonfly”), a large-bodied insect that is ecologically and culturally significant to rivers throughout the western United States. We sampled gut contents and polyunsaturated fatty acid composition of salmonflies to compare resource consumption across river (Madison or Gallatin, Montana), sex (male or female), and habitat (rock or woody debris). We found that allochthonous detritus comprised the majority of salmonfly diets in the Gallatin and Madison Rivers, making up 68% of the gut contents on average, followed by amorphous detritus, diatoms, and filamentous algae. Diets showed little variation across river, sex, or length. Minor differences in diets were detected by habitat type, with a higher proportion of diatoms in the diets of salmonflies collected from rocky habitat compared to woody debris. Fatty acid composition generally supported the results of gut content analysis but highlighted the importance of primary producers. The presence of eicosapentaenoic acid (20:5n-3) and alpha linolenic acid (18:3n-3) indicated consumption of diatoms and filamentous green algae, respectively. Our research underscores the importance of a healthy riparian zone that provides allochthonous detritus for invertebrate nutrition as well as the role of algae as an important source of fatty acids.

Montana↗
USGS2022

Redundancy analysis reveals complex den use patterns by eastern spotted skunks, a conditional specialist

Wildlife managers tasked with understanding habitat and resource selection at the population level attempt to characterize patterns in nature that aid and inform conservation. Resource selection functions (RSFs), such as discrete choice analyses, are the standard convention to characterize the effects of habitat attributes on resource selection patterns. These tools are invaluable for wildlife management and conservation and have proven successful in numerous studies. However, the analysis of small datasets using RSF becomes problematic when attempting to account for complex sources of variation, and the inclusion of factors such as weather or intrinsic variation on target species' response may produce models with poor predictive ability. We compared the application of generalized linear mixed-effects modeling (GLMM) and redundancy analysis (RDA) on Appalachian spotted skunk ( Spilogale putorius putorius ) den selection data at four study sites within the George Washington, Jefferson, and Monongahela National Forests, and surrounding private lands in the Appalachian Mountains of western Virginia and northeastern West Virginia. We assessed the need for the inclusion of alternative sources of variation (i.e., weather conditions and individual intrinsic variation) in addition to standard habitat attributes to better identify sources of variation in den selection. The RDA elucidated complex and opposing relationships, whereby den type use was based on reproductive status or weather condition, which were not evident in the GLMM model that relied solely on habitat measures. Our results demonstrated the importance of examining resource selection data using multivariate techniques in addition to conventional discrete choice analyses to better understand intricate habitat–species relationships, especially for small datasets. Furthermore, from our analyses, we proposed that spotted skunks are neither a true generalist nor specialist species. We introduced and define the term “conditional specialist” to represent a species that is conditionally selective of a given resource in response to one or more current environmental or intrinsic conditions.

Viginia, West Virginia↗
USGS2023

Juvenile life history diversity is associated with lifetime individual heterogeneity in a migratory fish

Differences in the life history pathways (LHPs) of juvenile animals are often associated with differences in demographic rates in later life stages. For migratory animals, different LHPs often result in animals from the same population occupying distinct habitats subjected to different environmental drivers. Understanding how demographic rates differ among animals expressing different LHPs may reveal fitness trade-offs that drive the expression of alternative LHPs and enable better prediction of population dynamics in a changing environment. To understand how demographic outcomes and their relationships with environmental variables differ among animals with different LHPs, we analyzed a long-term (2006–2021) mark–recapture dataset for Chinook salmon ( Oncorhynchus tshawytscha ) from the Wenatchee River, Washington, USA. Distinct LHPs represented in this population include either remaining in the natal stream until emigrating to the ocean as a 1-year-old (natal-reach rearing) or emigrating from the natal stream and rearing in downstream habitats for several months before completing the emigration to the ocean as a 1-year-old (downstream rearing). We found that downstream-rearing fish emigrated to the ocean 19 days earlier on average and returned as adults from the ocean at higher rates. We detected a positive correlation between rate of return from the ocean by downstream-rearing fish and coastal upwelling in their spring of outmigration, whereas for natal-reach-rearing fish we detected a positive correlation with sea surface temperature during their first marine summer. Different responses to environmental variability should lead to asynchrony in adult abundance among juvenile LHPs. A higher proportion of downstream-rearing fish returned at younger ages compared with natal-reach-rearing fish, which contributed to variability in age at reproduction and greater mixing across generations. Our results demonstrate how diversity in juvenile LHPs is associated with heterogeneity in demographic rates during subsequent life stages, which can in turn affect variance in aggregate population abundance and response to environmental change. Our findings underscore the importance of considering life history diversity in demographic analyses and provide insights into the effects of life history diversity on population dynamics and trade-offs that contribute to the maintenance of life history diversity.

Washington↗
USGS2023

Integrating community science and agency-collected monitoring data to expand monitoring capacity at large spatial scales

Monitoring species to better understand their status, ecology, and management needs is a major expense for agencies tasked with biodiversity conservation. Community science data have the potential to improve monitoring for minimal cost, given appropriate analytical frameworks. We describe a framework for integrating data from the eBird community science platform with agency-collected monitoring data using a multistate occupancy model. Our model accounts for the structural differences across datasets and allows for estimation of both occupancy and breeding probabilities. The framework was applied to Common Loons ( Gavia immer ) in Washington State. A total of 766 sites had observation effort, of which 713 sites had only eBird effort, 26 sites had only Washington Department of Fish and Wildlife (WDFW) effort, and 27 sites had both. We predicted that the probability of occupancy was only 0.07 (95% Bayesian credible interval, BCI = 0.02–0.51) at the 2324 sites in our sampling frame, though the probability that Common Loons were breeding at occupied sites was 0.95 (95% BCI = 0.71–1.00). We found that probability of occupancy was positively related to waterbody size (probability of a positive effect = 0.88) and negatively related to an index of human influence (probability of a negative effect = 0.94). We found that probability of breeding at occupied sites was positively related to tree canopy cover (0.86), negatively related to elevation (0.99), and negatively related to barren, scrub/shrub, and herbaceous land cover (0.98). We found that state agency biologists were 16 times more likely to detect breeding Common Loons at a site than were eBird users (0.94, 95% BCI = 0.78–0.99 for agency biologists vs. 0.08, 95% BCI = 0.06–0.10 for eBird users). However, the amount of effort expended by eBird users meant that they confirmed Common Loons at 94 sites while agency biologists confirmed them at just 24 sites, although evidence of reproduction was only contributed by agency biologists. Our results provide a better understanding of the distribution of Common Loons in Washington, while further demonstrating that community science data can be a valuable complement to agency-collected data, if appropriate frameworks are developed to integrate these data sources.

Ecosphere↗
USGS2024

Evaluating the effects of nest management on a recovering raptor using integrated population modeling

Evaluating population responses to management is a crucial component of successful conservation programs. Models predicting population growth under different management scenarios can provide key insights into the efficacy of specific management actions both in reversing population decline and in maintaining recovered populations. Bald eagle ( Haliaeetus leucocephalus ) conservation in the United States has seen many successes over the last 50 years, yet the extent to which the bald eagle population has recovered in Arizona, an important population within the Southwest region, remains an area of debate. Estimates of the species' population trend and an evaluation of ongoing nest-level management practices are needed to inform management decisions. We developed a Bayesian integrated population model (IPM) and population viability analysis (PVA) using a 36-year dataset to assess Arizona bald eagle population dynamics and their underlying demographic rates under current and possible future management practices. We estimated that the population grew from 77 females in 1993 to 180 females in 2022, an average yearly increase of 3%. Breeding sites that had trained personnel (i.e., nestwatchers) stationed at active nests to mitigate human disturbance had a 28% higher reproductive output than nests without this protection. Uncertainty around population trends was high, but scenarios that continued the nestwatcher program were less likely to predict abundance declines than scenarios without nestwatchers. Here, the IPM-PVA framework provides a useful tool both for estimating the effectiveness of past management actions and for exploring the management needs of a delisted population, highlighting that continued management action may be necessary to maintain population viability even after meeting certain recovery criteria.

Arizona↗
USGS2024

The effects of spatio-temporal variation in marine resources on the occupancy dynamics of a terrestrial avian predator

Identifying how species respond to system drivers such as weather, climate, habitat, and resource availability is critical in understanding population change. In coastal areas, the transfer of nutrients across the marine and terrestrial interface increases complexity. Nesting populations of bald eagles ( Haliaeetus leucocephalus ) along the Pacific coast of North America, although terrestrial, are largely dependent on marine resources during the breeding season and therefore represent a good focal species for understanding linkages of nutrients between terrestrial and marine systems. Due to their location, coastal eagle populations are susceptible to a variety of climate-induced perturbations, from both land and sea. The northeast Pacific Marine Heatwave (PMH) of 2014-2016 had wide-ranging impacts on the marine ecosystem and provided an opportunity to explore how marine conditions can impact terrestrial wildlife populations. We used a spatially-explicit multi-state occupancy modeling framework to analyze >30yrs of bald eagle nest occupancy data collected in four large national parks along a coastal-interior gradient in Alaska, USA. We assessed occupancy state in relation to weather conditions, salmon abundance, access to alternate prey resources, and the PMH event to help elucidate the factors affecting bald eagle occupancy dynamics over time. We found that occupancy probability was higher in areas where prey resources were concentrated (e.g., near seabird colonies, where bears facilitate access to salmon carcasses). We also found that the probability of reproductive success was higher during warmer, drier springs with higher-than-average salmon abundance. After the onset of the marine heatwave, success declined in the areas most dependent on non-salmon marine resources. These findings confirm the importance of spring weather conditions and access to salmon resources during the critical chick-rearing period, but also reveal that marine heatwaves may have important secondary effects through a reduction in the overall quantity or quality of prey available to bald eagles. Given ongoing warming at high latitudes and the expectation that marine heatwaves will become more common, our findings are useful for understanding ongoing and future changes in the transfer of nutrients from marine to terrestrial ecosystems and how such changes may impact terrestrial species such as bald eagles.

Alaska↗
USGS2024

Quantifying uncertainty in anthropogenic causes of injury and mortality for an endangered baleen whale

Understanding the causes of mortality for a declining species is essential for developing effective conservation and management strategies, particularly when anthropogenic activities are the primary threat. Using a competing hazards framework allows for robust estimation of the cause-specific variation in risk that may exist across multiple dimensions, such as time and individual. Here, we estimated cause-specific rates of severe injury and mortality for North Atlantic right whales ( Eubalaena glacialis ), a critically endangered species that is currently in peril due to human-caused interactions. We developed a multistate capture–recapture model that leveraged 30 years of intensive survey effort yielding sightings of individuals with injury assessments and necropsies of carcass recoveries. We examined variation in the hazard rates of severe injury and mortality due to entanglements in fishing gear and vessel strikes as explained by temporal patterns and the age and reproductive status of the individual. We found strong evidence for increased rates of severe entanglement injuries after 2013 and for females with calves, with consequently higher marginal mortality. The model results also suggested that despite vessel strikes causing a lower average rate of severe injuries, the higher mortality rate conditional on injury results in significant total mortality risk, particularly for females resting from a recent calving event. Large uncertainty in the estimation of carcass recovery rate for vessel strike deaths permeated into the apportionment of mortality causes. The increased rates of North Atlantic right whale mortality in the last decade, particularly for reproducing females, has been responsible for the severe decline in the species. By apportioning the human-caused threats using a quantitative approach with estimation of relevant uncertainty, this work can guide development of conservation and management strategies to facilitate species recovery. Our approach is relevant to other monitored populations where cause-specific injuries from multiple threats can be observed in live and dead individuals.

Ecosphere↗
USGS2016

Predicting animal home-range structure and transitions using a multistate Ornstein-Uhlenbeck biased random walk

The home‐range concept is central in animal ecology and behavior, and numerous mechanistic models have been developed to understand home range formation and maintenance. These mechanistic models usually assume a single, contiguous home range. Here we describe and implement a simple home‐range model that can accommodate multiple home‐range centers, form complex shapes, allow discontinuities in use patterns, and infer how external and internal variables affect movement and use patterns. The model assumes individuals associate with two or more home‐range centers and move among them with some estimable probability. Movement in and around home‐range centers is governed by a two‐dimensional Ornstein‐Uhlenbeck process, while transitions between centers are modeled as a stochastic state‐switching process. We augmented this base model by introducing environmental and demographic covariates that modify transition probabilities between home‐range centers and can be estimated to provide insight into the movement process. We demonstrate the model using telemetry data from sea otters ( Enhydra lutris ) in California. The model was fit using a Bayesian Markov Chain Monte Carlo method, which estimated transition probabilities, as well as unique Ornstein‐Uhlenbeck diffusion and centralizing tendency parameters. Estimated parameters could then be used to simulate movement and space use that was virtually indistinguishable from real data. We used Deviance Information Criterion (DIC) scores to assess model fit and determined that both wind and reproductive status were predictive of transitions between home‐range centers. Females were less likely to move between home‐range centers on windy days, less likely to move between centers when tending pups, and much more likely to move between centers just after weaning a pup. These tendencies are predicted by theoretical movement rules but were not previously known and show that our model can extract meaningful behavioral insight from complex movement data.

Ecology↗
USGS2017

Circumpolar analysis of the Adélie Penguin reveals the importance of environmental variability in phenological mismatch

Evidence of climate-change-driven shifts in plant and animal phenology have raised concerns that certain trophic interactions may be increasingly mismatched in time, resulting in declines in reproductive success. Given the constraints imposed by extreme seasonality at high latitudes and the rapid shifts in phenology seen in the Arctic, we would also expect Antarctic species to be highly vulnerable to climate-change-driven phenological mismatches with their environment. However, few studies have assessed the impacts of phenological change in Antarctica. Using the largest database of phytoplankton phenology, sea-ice phenology, and Adélie Penguin breeding phenology and breeding success assembled to date, we find that, while a temporal match between Penguin breeding phenology and optimal environmental conditions sets an upper limit on breeding success, only a weak relationship to the mean exists. Despite previous work suggesting that divergent trends in Adélie Penguin breeding phenology are apparent across the Antarctic continent, we find no such trends. Furthermore, we find no trend in the magnitude of phenological mismatch, suggesting that mismatch is driven by interannual variability in environmental conditions rather than climate-change-driven trends, as observed in other systems. We propose several criteria necessary for a species to experience a strong climate-change-driven phenological mismatch, of which several may be violated by this system.

Ecology↗
USGS2017

Integrating count and detection–nondetection data to model population dynamics

There is increasing need for methods that integrate multiple data types into a single analytical framework as the spatial and temporal scale of ecological research expands. Current work on this topic primarily focuses on combining capture–recapture data from marked individuals with other data types into integrated population models. Yet, studies of species distributions and trends often rely on data from unmarked individuals across broad scales where local abundance and environmental variables may vary. We present a modeling framework for integrating detection–nondetection and count data into a single analysis to estimate population dynamics, abundance, and individual detection probabilities during sampling. Our dynamic population model assumes that site-specific abundance can change over time according to survival of individuals and gains through reproduction and immigration. The observation process for each data type is modeled by assuming that every individual present at a site has an equal probability of being detected during sampling processes. We examine our modeling approach through a series of simulations illustrating the relative value of count vs. detection–nondetection data under a variety of parameter values and survey configurations. We also provide an empirical example of the model by combining long-term detection–nondetection data (1995–2014) with newly collected count data (2015–2016) from a growing population of Barred Owl ( Strix varia ) in the Pacific Northwest to examine the factors influencing population abundance over time. Our model provides a foundation for incorporating unmarked data within a single framework, even in cases where sampling processes yield different detection probabilities. This approach will be useful for survey design and to researchers interested in incorporating historical or citizen science data into analyses focused on understanding how demographic rates drive population abundance.

Ecology↗
USGS2021

Migration distance and maternal resource allocation determine timing of birth in a large herbivore

Birth timing is a key life-history characteristic that influences fitness and population performance. For migratory animals, however, appropriately timing birth on one seasonal range may be constrained by events occurring during other parts of the migratory cycle. We investigated how the use of capital and income resources may facilitate flexibility in reproductive phenology of migratory mule deer in western Wyoming, USA, over a 5-yr period (2015–2019). Specifically, we examined how seasonal interactions affected three interrelated life-history characteristics: fetal development, birth mass, and birth timing. Females in good nutritional condition at the onset of winter and those that migrated short distances had more developed fetuses (measured as fetal eye diameter in March). Variation in parturition date was explained largely by fetal development; however, there were up to 16 d of plasticity in expected birth date. Plasticity in expected birth date was shaped by income resources in the form of exposure to spring green-up. Although individuals that experienced greater exposure to spring green-up were able to advance expected birth date, being born early or late with respect to fetal development had no effect on birth mass of offspring. Furthermore, we investigated the trade-offs migrating mule deer face by evaluating support for existing theory that predicts that births should be matched to local peaks in resource availability at the birth site. In contrast to this prediction, only long-distance migrants that paced migration with the flush of spring green-up, giving birth shortly after ending migration, were able to match birth with spring green-up. Shorter-distance migrants completed migration sooner and gave birth earlier, seemingly trading off more time for offspring to grow and develop over greater access to resources. Thus, movement tactic had profound downstream effects on birth timing. These findings highlight a need to reconsider classical theory on optimal birth timing, which has focused solely on conditions at the birth site.

Wyoming↗
USGS2022

Modeling spatiotemporal abundance and movement dynamics using an integrated spatial capture–recapture movement model

Animal movement is a fundamental ecological process affecting the survival and reproduction of individuals, the structure of populations, and the dynamics of communities. Methods to quantify animal movement and spatiotemporal abundances, however, are generally separate and therefore omit linkages between individual-level and population-level processes. We describe an integrated spatial capture–recapture (SCR) movement model to jointly estimate (1) the number and distribution of individuals in a defined spatial region and (2) movement of those individuals through time. We applied our model to a study of polar bears ( Ursus maritimus ) in a 28,125 km 2 survey area of the eastern Chukchi Sea, USA in 2015 that incorporated capture–recapture and telemetry data. In simulation studies, the model provided unbiased estimates of movement, abundance, and detection parameters using a bivariate normal random walk and correlated random walk movement process. Our case study provided detailed evidence of directional movement persistence for both male and female bears, where individuals regularly traversed areas larger than the survey area during the 36-day study period. Scaling from individual- to population-level inferences, we found that densities varied from <0.75 bears/625 km 2 grid cell/day in nearshore cells to 1.6–2.5 bears/grid cell/day for cells surrounded by sea ice. Daily abundance estimates ranged from 53 to 69 bears, with no trend across days. The cumulative number of unique bears that used the survey area increased through time due to movements into and out of the area, resulting in an estimated 171 individuals using the survey area during the study (95% credible interval 124–250). Abundance estimates were similar to a previous multiyear integrated population model using capture–recapture and telemetry data (2008–2016; Regehr et al., Scientific Reports 8:16780, 2018). Overall, the SCR–movement model successfully quantified both individual- and population-level space use, including the effects of landscape characteristics on movement, abundance, and detection, while linking the movement and abundance processes to directly estimate density within a prescribed spatial region and temporal period. Integrated SCR–movement models provide a generalizable approach to incorporate greater movement realism into population dynamics and link movement to emergent properties including spatiotemporal densities and abundances.

eastern Chukchi Sea↗
USGS2024

Sources of bias in applying close-kin mark–recapture to terrestrial game species with different life histories

Close-kin mark–recapture (CKMR) is a method analogous to traditional mark–recapture but without requiring recapture of individuals. Instead, multilocus genotypes (genetic marks) are used to identify related individuals in one or more sampling occasions, which enables the opportunistic use of samples from harvested wildlife. To apply the method accurately, it is important to build appropriate CKMR models that do not violate assumptions linked to the species’ and population's biology and sampling methods. In this study, we evaluated the implications of fitting overly simplistic CKMR models to populations with complex reproductive success dynamics or selective sampling. We used forward-in-time, individual-based simulations to evaluate the accuracy and precision of CKMR abundance and survival estimates in species with different longevities, mating systems, and sampling strategies. Simulated populations approximated a range of life histories among game species of North America with lethal sampling to evaluate the potential of using harvested samples to estimate population size. Our simulations show that CKMR can yield nontrivial biases in both survival and abundance estimates, unless influential life history traits and selective sampling are explicitly accounted for in the modeling framework. The number of kin pairs observed in the sample, in combination with the type of kinship used in the model (parent–offspring pairs and/or half-sibling pairs), can affect the precision and/or accuracy of the estimates. CKMR is a promising method that will likely see an increasing number of applications in the field as costs of genetic analysis continue to decline. Our work highlights the importance of applying population-specific CKMR models that consider relevant demographic parameters, individual covariates, and the protocol through which individuals were sampled.

Ecology↗