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Effects of water temperature, turbidity, and rainbow trout on humpback chub population dynamics

Humpback chub ( Gila cypha Miller 1946), found only in the Colorado River Basin, was one of the first species to be given full protection under the Endangered Species Act of 1973. Habitat alterations, such as changes in flow and water temperature caused by dams, and the introduction of nonnative fish have contributed to population declines in humpback chub and other native fish. These habitat alterations provide ideal conditions for the nonnative sport fish, rainbow trout ( Oncorhynchus mykiss Walbaum 1792). Managers have long sought to balance recovery of humpback chub with a viable rainbow trout fishery. However, finding this balance requires understanding how environmental conditions and rainbow trout have affected humpback chub populations. Recent findings indicate that the Colorado River can be managed for rainbow trout while maintaining a healthy humpback chub population in Grand Canyon National Park.

Arizona↗

Longer-term effects of selective thinning on microarthropod communities in a late-successional coniferous forest

Microarthropod densities within late-successional coniferous forests thinned 16–41 yr before sampling were compared with adjacent unthinned stands to identify longer term effects of thinning on this community. Soil and forest floor layers were sampled separately on eight paired sites. Within the forest floor oribatid, mesostigmatid, and to a marginal extent, prostigmatid mites, were reduced in thinned stands compared with unthinned stands. No differences were found for Collembola in the forest floor or for any mite suborder within the soil. Family level examination of mesostigmatid and prostigmatid mites revealed significant differences between stand types for both horizons. At the species level, thinning influenced numerous oribatid mites and Collembola. For oribatid mites, significant or marginally significant differences were found for seven of 15 common species in the forest floor and five of 16 common species in soil. Collembola were affected less, with differences found for one of 11 common species in the forest floor and three of 13 common species in soil. Multivariate analysis of variance and ordination indicated that forest thinning had little influence on the composition of oribatid mite and collembolan communities within either the forest floor or soil. Differences in microclimate or in the accumulation of organic matter on the forest floor were likely most responsible for the observed patterns of abundance. Considering the role that microarthropods play in nutrient cycling, determining the functional response of a wide range of taxa to thinning may be important to effective ecosystem management.

Oregon↗

Strategies for managing the effects of urban development on streams

Urban development remains an important agent of environmental change in the United States. The U.S. population grew by 17 percent from 1982 to 1997, while urbanized land area grew by 47 percent, suggesting that urban land consumption far outpaced population growth (Fulton and others, 2001; Sierra Club, 2003; American Farmland Trust, 2009). Eighty percent of Americans now live in metropolitan areas. Each American effectively occupies about 20 percent more developed land (for housing, schools, shopping, roads, and other related services) than 20 years ago (Markham and Steinzor, 2006). Passel and Cohn (2008) predict a dramatic 48 percent increase in the population of the United States from 2005 to 2050. The advantages and challenges of living in these developed areas—convenience, congestion, employment, pollution—are part of the day-to-day realities of most Americans. Nowhere are the environmental changes associated with urban development more evident than in urban streams. The U.S. Geological Survey's National Water-Quality Assessment (NAWQA) Program investigation of the effects of urban development on stream ecosystems (EUSE) during 1999–2004 provides the most spatially comprehensive analysis of stream impacts of urban development that has been completed in the United States. A nationally consistent study design was used in nine metropolitan areas of the United States—Portland, Oregon; Salt Lake City, Utah; Birmingham, Alabama; Atlanta, Georgia; Raleigh, North Carolina; Boston, Massachusetts; Denver, Colorado; Dallas, Texas; and Milwaukee, Wisconsin. A summary report published as part of the EUSE study describes several of these impacts on urban streams ( Coles and others, 2012 ).

Alabama;Colorado;Georgia;Massachusetts;North Carol↗

Decadal stability in stream fish communities and contemporary ecological drivers of species occupancy in two Appalachian U.S. National Parks

Objective Although conserving fish biodiversity in lotic systems is challenging, protected areas can provide refuge from certain environmental stressors. In the Appalachian region, USA, the National Park Service manages Delaware Water Gap National Recreation Area (DEWA) and New River Gorge National Park & Preserve (NERI), which contain abundant and diverse freshwater resources. To assess the effectiveness of these protected areas in conserving stream fishes, we evaluated decadal changes and ecological drivers of species occupancy and detection. Methods Using fish assemblage data from backpack electrofishing surveys conducted in both parks during 2013–2014 and 2022–2023, we quantified temporal differences in species occupancy and detection probabilities using a Bayesian hierarchical multispecies occupancy modeling approach. For the 2022–2023 survey, we included habitat variables as predictors of occupancy and detection. Results Community composition and occupancy probabilities for species in both parks remained similar through time, with the most recent occupancy estimates ranging from 0.07 (90% CI = 0.02, 0.14) for Variegate Darter Etheostoma variatum and Rainbow Darter E. ­caeruleum to 0.73 (90% credible interval = 0.59, 0.85) for Blacknose Dace Rhinichthys atratulus . Changes in occupancy were more prominent at Delaware Water Gap National Recreation Area than New River Gorge National Park & Preserve, with Yellow Perch Perca flavescens having a posterior mean difference of −0.17 [90% credible interval = −0.35, −0.01] and American Eel Anguilla rostrata having a high posterior probability (>80%) of occupancy increasing by at least 1%. Habitat variables were related to community structure, but effects varied in significance, magnitude, and direction among species and parks. Conversely, species-specific detection probabilities were comparatively less affected by environmental and sampling effort predictors. Conclusions Between 2013 and 2023, occupancy estimates for 44 fish species across two protected, ecologically diverse landscapes remained relatively stable. Furthermore, we highlight the efficacy of national parks in maintaining freshwater fish biodiversity amidst rapid global change.

New Jersey, Pennsylvania, West Virginia↗

Employing an ecosystem services framework to deliver decision ready science

Public land managers have limited information to allow for the integration and balancing of multiple objectives in land management decisions including the social (cultural and health), economic (monetary and nonmonetary), and environmental aspects. In this article, we document an approach to consider the many facets of decision making by incorporating them into a decision context using an ecosystem services framework. This analysis is based on a multi-partner project led by the US Geological Survey and the US Fish and Wildlife Service to provide land management decision support for the Great Dismal Swamp National Wildlife Refuge. It is an integrated ecologic-economic analysis of baseline (current) and potential future quantities, qualities, and values of selected ecosystem services from the Refuge. Alternative management scenarios are modeled to consider the impact of specific management actions or natural disturbances on priority ecosystem services. We examine the benefits and challenges of using this framework. Key lessons learned from this effort include the mismatch in timing between physical and social science; the challenge of integrating methods from multiple disciplines; the importance of frequent communication to overcome siloed research; and the utility of an integrating framework for ecosystem services and supporting tools such as the dynamic ecosystem model.

Advances in Ecological Research↗

Impacts of tidal road-stream crossings on aquatic organism passage

ivers and streams are highly vulnerable to fragmentation from roads due to their prevalence in the landscape. Road-stream crossings are far more numerous than other anthropogenic barriers such as dams; these crossing structures (culverts, bridges, fords, and tide gates) have been demonstrated to impede the passage of aquatic organisms. However, road-stream crossings vary widely in the extent to which they serve as a barrier. It is important to identify barrier severity to facilitate prioritization of restoration activities, since proactively addressing all structures is not feasible. In 2015 the North Atlantic Landscape Conservation Collaborative (LCC) funded a project managed by the North Atlantic Aquatic Connectivity Cooperative (NAACC) to develop a unified protocol for assessing aquatic road-stream crossings focusing on aquatic connectivity. The NAACC relied on rapid field-based assessments, which have been shown to be a useful tool for gathering information necessary for prioritization. However, the rapid assessment protocol developed from the NAACC initiative is not applicable to tidal crossings as it does not address two-directional flow, daily water depth fluctuations, or many of the species likely present in coastal habitats. The goal of this report is to provide the background necessary to create guidelines and rapid assessment tools for assessing risk posed to aquatic organism passage at tidal crossings. To accomplish these goals, this report identifies species present in tidally influenced coastal wetlands, the unique traits they may display that puts them at risk for detrimental impact from impeded passage, and passage threats unique to tidal crossings that are not addressed by protocols designed for non-tidal systems. Species lists were compiled through literature reviews and discussions with regional researchers and managers familiar with coastal ecosystems or fish passage concerns. Life history traits, environmental sensitivities, and movement patterns for each species were compiled to build a database that can be queried to identify species that are highly vulnerable to impeded passage at tidal crossings (Available at: https://umass.box.com/s/w5mhokxjxshyxmr7si2v0gzcypcitu9d ). These risk factors for species, combined with passage threats associated with specific crossing characteristics are discussed in this report. The species list is thorough enough to provide a baseline summary of the types of threats experienced by aquatic organisms at tidal road-stream crossings, but it is not exhaustive. Unique ecosystems, species assemblages, management goals, and prioritization models may require different approaches and solutions. Thus, care must be taken to ensure that assessment tools are appropriate to a project’s target species, habitats, and scale.

Cooperator Science Series↗

Seventy-five years of science—The U.S. Geological Survey’s Western Fisheries Research Center

As of January 2010, 75 years have elapsed since Dr. Frederic Fish initiated the pioneering research program that would evolve into today’s Western Fisheries Research Center (WFRC). Fish began his research working alone in the basement of the recently opened Fisheries Biological Laboratory on Lake Union in Seattle, Washington. WFRC’s research began under the aegis of the U.S. Fish and Wildlife Service and ends its first 75 years as part of the U.S. Geological Survey with a staff of more than 150 biologists and support personnel and a heritage of fundamental research that has made important contributions to our understanding of the biology and ecology of the economically important fish and fish populations of the Nation. Although the current staff may rarely stop to think about it, WFRC’s antecedents extend many years into the past and are intimately involved with the history of fisheries conservation in the Western United States. Thus, WFRC Director Lyman Thorsteinson asked me to write the story of this laboratory “while there are still a few of you around who were here for some of the earlier years” to document the rich history and culture of WFRC by recognizing its many famous scientists and their achievements. This historyalso would help document WFRC’s research ‘footprint’ in the Western United States and its strategic directions. Center Director Thorsteinson concluded that WFRC’s heritage told by an emeritus scientist also would add a texture of legitimacy based on personal knowledge that will all-to-soon be lost to the WFRC and to the USGS. The WFRC story is important for the future as well as for historical reasons. It describes how we got to the place we are today by documenting the origin, original mission, and our evolving role in response to the constantly changing technical information requirements of new environmental legislation and organizational decision-making. The WFRC research program owes its existence to the policy requirements of Federal conservation legislation originating with the construction of Grand Coulee Dam in 1933. The research program was shaped by laws enacted in subsequent years such as the Federal Water Pollution Control Act (1972), National Environmental Policy Act (1973), Endangered Species Act (1974), and Northwest Power Planning Act (1980), to name only a few. The WFRC has not been constrained by direct management or regulatory responsibility for a particular fishery (such as providing sustainable catch limits data to a resource management structure). Thus, WFRC has been able to concentrate on scientific pursuits and information needs required by contemporary environmental legislation. Over the years, we have pioneered in several important areas of fisheries research including the diagnoses and control of diseases in economically important fish, effects of environmental alterations on the physiological quality and survival of Pacific salmon released from federal mitigation hatcheries, applications in biotelemetry, and the bioenergetics of predator-prey interactions in the Columbia River. The WFRC of today is a widely distributed organization in the Western United States. Knowledge of the historical connections and accomplishments of our predecessors is important beyond the sense of pride and unity it instills in the WFRC family of today. For example, a discerning reader will note the evolution of WFRC’s research from a single disciplinary focus (early era—hatchery disease problems), to multiple disciplines (middle to late era—species, populations, habitats; threatened and endangered species), to the present era (multidisciplinary and with increasing process focus). For the benefit of the current WFRC staff, more emphasis has been placed on the early years rather than on the present day because people are quite naturally more familiar with the recent past than with the research done during the first decades of WFRC’s existence. By every rational measure, the WFRC has evolved into a fisheries research organization well positioned to provide the biological information needed to support the continued conservation and management of our Nation’s living aquatic natural resources. The high standard of excellence that connects WFRC’s past to our present research program provides a firm foundation on which to base the work yet to be done. In another 75 years, WFRC will undoubtedly be a very different place than it is today, but its evolution will be forever rooted in the story of the research and of the people related here. More about the diverse fisheries research projects WFRC scientists are conducting today is available at WFRC’s website: http://wfrc.usgs.gov/.

Washington↗

Coastal geoindicators of environmental change in the humid tropics

The primary geoindicators appropriate for monitoring environmental changes in the humid tropics are transitory surface water levels, shoreline position, wetlands distribution, coral reefs, landforms, and sediment sequence and composition. Lateral zonations and temporal successions of vegetation also can be used as geoindicators of riverine and shoreline changes. All of these coastal geoindicators are sensitive to regional tectonic processes and anthropogenic alterations and they typically reflect significant changes in coastal conditions such as fluvial processes, coastal energy, water quality, relative sea level, and sediment supply. Where humid tropical coasts coincide with active tectonic margins, indicators of seismic activity are critical to understanding Coastal changes associated with co-seismic subsidence or uplift, tsunamis, and liquefaction of coastal sediments. Coastal landforms and sedimentary deposits that record late Quaternary environmental changes include perched fluvial and marine terraces, delta-plain morphologies, crevassesplay deposits, peats and other paleosols, beach ridges, mud capes, and mud volcanoes. Although these features and deposits typically reflect environmental changes spanning more than 100 years, they are relevant to modern processes, management of coastal lands and resources, and prediction of future conditions. In some regions of the humid tropics, large coastal areas are unaffected by hurricanes or typhoons. Nevertheless, these tropical coasts are vulnerable to other non-storm processes, such as El Nin??o events, tsunamis, and monsoons that increase water levels, and cause widespread flooding and beach erosion. The environmental and political significance of coastal geoindicators increases when they are integrated and applied to issues of human safety and health such as hazards mapping, risk assessment, and dispersion of contaminated sediments. However, to be relevant, those socio-environmental applications demand accurate predictions of future trends and rates of change.

Environmental Geology↗

Relation of watershed setting and stream nutrient yields at selected sites in central and eastern North Carolina, 1997-2008

Data collected between 1997 and 2008 at 48 stream sites were used to characterize relations between watershed settings and stream nutrient yields throughout central and eastern North Carolina. The focus of the investigation was to identify environmental variables in watersheds that influence nutrient export for supporting the development and prioritization of management strategies for restoring nutrient-impaired streams. Nutrient concentration data and streamflow data compiled for the 1997 to 2008 study period were used to compute stream yields of nitrate, total nitrogen (N), and total phosphorus (P) for each study site. Compiled environmental data (including variables for land cover, hydrologic soil groups, base-flow index, streams, wastewater treatment facilities, and concentrated animal feeding operations) were used to characterize the watershed settings for the study sites. Data for the environmental variables were analyzed in combination with the stream nutrient yields to explore relations based on watershed characteristics and to evaluate whether particular variables were useful indicators of watersheds having relatively higher or lower potential for exporting nutrients. Data evaluations included an examination of median annual nutrient yields based on a watershed land-use classification scheme developed as part of the study. An initial examination of the data indicated that the highest median annual nutrient yields occurred at both agricultural and urban sites, especially for urban sites having large percentages of point-source flow contributions to the streams. The results of statistical testing identified significant differences in annual nutrient yields when sites were analyzed on the basis of watershed land-use category. When statistical differences in median annual yields were noted, the results for nitrate, total N, and total P were similar in that highly urbanized watersheds (greater than 30 percent developed land use) and (or) watersheds with greater than 10 percent point-source flow contributions to streamflow had higher yields relative to undeveloped watersheds (having less than 10 and 15 percent developed and agricultural land uses, respectively) and watersheds with relatively low agricultural land use (between 15 and 30 percent). The statistical tests further indicated that the median annual yields for total P were statistically higher for watersheds with high agricultural land use (greater than 30 percent) compared to the undeveloped watersheds and watersheds with low agricultural land use. The total P yields also were higher for watersheds with low urban land use (between 10 and 30 percent developed land) compared to the undeveloped watersheds. The study data indicate that grouping and examining stream nutrient yields based on the land-use classifications used in this report can be useful for characterizing relations between watershed settings and nutrient yields in streams located throughout central and eastern North Carolina. Compiled study data also were analyzed with four regression tree models as a means of determining which watershed environmental variables or combination of variables result in basins that are likely to have high or low nutrient yields. The regression tree analyses indicated that some of the environmental variables examined in this study were useful for predicting yields of nitrate, total N, and total P. When the median annual nutrient yields for all 48 sites were evaluated as a group (Model 1), annual point-source flow yields had the greatest influence on nitrate and total N yields observed in streams, and annual streamflow yields had the greatest influence on yields of total P. The Model 1 results indicated that watersheds with higher annual point-source flow yields had higher annual yields of nitrate and total N, and watersheds with higher annual streamflow yields had higher annual yields of total P. When sites with high point-source flows (greater than 10 percent of total streamflow) were excluded from the regression tree analyses (Models 2–4), the percentage of forested land in the watersheds was identified as the primary environmental variable influencing stream yields for both total N and total P. Models 2, 3 and 4 did not identify any watershed environmental variables that could adequately explain the observed variability in the nitrate yields among the set of sites examined by each of these models. The results for Models 2, 3, and 4 indicated that watersheds with higher percentages of forested land had lower annual total N and total P yields compared to watersheds with lower percentages of forested land, which had higher median annual total N and total P yields. Additional environmental variables determined to further influence the stream nutrient yields included median annual percentage of point-source flow contributions to the streams, variables of land cover (percentage of forested land, agricultural land, and (or) forested land plus wetlands) in the watershed and (or) in the stream buffer, and drainage area. The regression tree models can serve as a tool for relating differences in select watershed attributes to differences in stream yields of nitrate, total N, and total P, which can provide beneficial information for improving nutrient management in streams throughout North Carolina and for reducing nutrient loads to coastal waters.

North Carolina↗

Integrated groundwater management: An overview of concepts and challenges

Managing water is a grand challenge problem and has become one of humanity’s foremost priorities. Surface water resources are typically societally managed and relatively well understood; groundwater resources, however, are often hidden and more difficult to conceptualize. Replenishment rates of groundwater cannot match past and current rates of depletion in many parts of the world. In addition, declining quality of the remaining groundwater commonly cannot support all agricultural, industrial and urban demands and ecosystem functioning, especially in the developed world. In the developing world, it can fail to even meet essential human needs. The issue is: how do we manage this crucial resource in an acceptable way, one that considers the sustainability of the resource for future generations and the socioeconomic and environmental impacts? In many cases this means restoring aquifers of concern to some sustainable equilibrium over a negotiated period of time, and seeking opportunities for better managing groundwater conjunctively with surface water and other resource uses. However, there are many, often-interrelated, dimensions to managing groundwater effectively. Effective groundwater management is underpinned by sound science (biophysical and social) that actively engages the wider community and relevant stakeholders in the decision making process. Generally, an integrated approach will mean “thinking beyond the aquifer”, a view which considers the wider context of surface water links, catchment management and cross-sectoral issues with economics, energy, climate, agriculture and the environment. The aim of the book is to document for the first time the dimensions and requirements of sound integrated groundwater management (IGM). The primary focus is on groundwater management within its system, but integrates linkages beyond the aquifer. The book provides an encompassing synthesis for researchers, practitioners and water resource managers on the concepts and tools required for defensible IGM, including how IGM can be applied to achieve more sustainable socioeconomic and environmental outcomes, and key challenges of IGM. The book is divided into five parts: integration overview and problem settings; governance; socioeconomics; biophysical aspects; and modelling and decision support. However, IGM is integrated by definition, thus these divisions should be considered a convenience for presenting the topics rather than hard and fast demarcations of the topic area.

Book chapter↗

Calibrating environmental DNA metabarcoding to conventional surveys for measuring fish species richness

The ability to properly identify species present in a landscape is foundational to ecology and essential for natural resource management and conservation. However, many species are often unaccounted for due to ineffective direct capture and visual surveys, especially in aquatic environments. Environmental DNA metabarcoding is an approach that overcomes low detection probabilities and should consequently enhance estimates of biodiversity and its proxy, species richness. Here, we synthesize 37 studies in natural aquatic systems to compare species richness estimates for bony fish between eDNA metabarcoding and conventional methods, such as nets, visual census, and electrofishing. In freshwater systems with fewer than 100 species, we found eDNA metabarcoding detected more species than conventional methods. Using multiple genetic markers further increased species richness estimates with eDNA metabarcoding. For more diverse freshwater systems and across marine systems, eDNA metabarcoding reported similar values of species richness to conventional methods; however, more studies are needed in these environments to better evaluate relative performance. In systems with greater biodiversity, eDNA metabarcoding will require more populated reference databases, increased sampling effort, and multi-marker assays to ensure robust species richness estimates to further validate the approach. eDNA metabarcoding is reliable and provides a path for broader biodiversity assessments that can outperform conventional methods for estimating species richness.

Frontiers in Ecology and Evolution↗

Urbanization effects on stream habitat characteristics in Boston, Massachusetts; Birmingham, Alabama; and Salt Lake City, Utah

Relations between stream habitat and urban land-use intensity were examined in 90 stream reaches located in or near the metropolitan areas of Salt Lake City, Utah (SLC); Birmingham, Alabama (BIR); and Boston, Massachusetts (BOS). Urban intensity was based on a multi-metric index (urban intensity index or UII) that included measures of land cover, socioeconomic organization, and urban infrastructure. Twenty-eight physical variables describing channel morphology, hydraulic properties, and streambed conditions were examined. None of the habitat variables was significantly correlated with urbanization intensity in all three study areas. Urbanization effects on stream habitat were less apparent for streams in SLC and BIR, owing to the strong influence of basin slope (SLC) and drought conditions (BIR) on local flow regimes. Streamflow in the BOS study area was not unduly influenced by similar conditions of climate and physiography, and habitat conditions in these streams were more responsive to urbanization. Urbanization in BOS contributed to higher discharge, channel deepening, and increased loading of fine-grained particles to stream channels. The modifying influence of basin slope and climate on hydrology of streams in SLC and BIR limited our ability to effectively compare habitat responses among different urban settings and identify common responses that might be of interest to restoration or water management programs. Successful application of land-use models such as the UII to compare urbanization effects on stream habitat in different environmental settings must account for inherent differences in natural and anthropogenic factors affecting stream hydrology and geomorphology. The challenge to future management of urban development is to further quantify these differences by building upon existing models, and ultimately develop a broader understanding of urbanization effects on aquatic ecosystems.

American Fisheries Society Symposium↗

Marshes to mangroves: Residential surveys reveal perceived wetland trade-offs for ecosystem services

Coastal landscapes are rapidly changing due to both climate change and the decisions of waterfront landowners. For instance, the climate-driven encroachment of woody mangrove species into grassy marshland areas is predicted to impact coastal ecosystems, with consequences for the ecosystem services these landscapes provide to people. However, there is a dearth of knowledge concerning coastal resident perceptions of the effects of mangrove expansion on wetlands and their ecosystem services, which may impact residents’ behavior around shorelines and landscape-level patterns. We surveyed waterfront residents in the northern Gulf of Mexico (USA) to understand perceptions of the relative performance of marshes and mangroves to deliver fisheries ecosystem services. Residential-scale shoreline condition and preference, recreational fishing activity, geography, and demographics were evaluated as potential predictors of resident perceptions through non-parametric comparisons across groups and ordered logit modeling. Significant predictors included area of residence, marsh shoreline condition, marsh shoreline preference, fishing frequency, and household income. Florida residents (where mangroves are most prevalent) and frequent recreational fishing participants exhibited stronger preference for mangroves. Unexpectedly, residents with marsh currently present on their shoreline also perceived that mangroves were better at delivering fisheries ecosystem services than marshes. Considering the important role that coastal residents play in shoreline management decisions, these results demonstrate how coastal resident attitudes may drive or mediate climate-driven processes in ways that are not evident by examining environmental conditions alone. Understanding social-ecological shifts due to climate change will be important to inform effective landscape management that promotes resilience in coastal ecosystems and societies.

Landscape and Urban Planning↗

Ecoregional-scale monitoring within conservation areas, in a rapidly changing climate

Long-term monitoring of ecological systems can prove invaluable for resource management and conservation. Such monitoring can: (1) detect instances of long-term trend (either improvement or deterioration) in monitored resources, thus providing an early-warning indication of system change to resource managers; (2) inform management decisions and help assess the effects of management actions, as well as anthropogenic and natural disturbances; and (3) provide the grist for supplemental research on mechanisms of system dynamics and cause-effect relationships (Fancy et al., 2009). Such monitoring additionally provides a snapshot of the status of monitored resources during each sampling cycle, and helps assess whether legal standards and regulations are being met. Until the last 1-2 decades, tracking and understanding changes in condition of natural resources across broad spatial extents have been infrequently attempted. Several factors, however, are facilitating the achievement of such broad-scale investigation and monitoring. These include increasing awareness of the importance of landscape context, greater prevalence of regional and global environmental stressors, and the rise of landscape-scale programs designed to manage and monitor biological systems. Such programs include the US Forest Service's Forest Inventory and Analysis (FIA) Program (Moser et al., 2008), Canada's National Forest Inventory, the 3Q Programme for monitoring agricultural landscapes of Norway (Dramstad et al., 2002), and the emerging (US) Landscape Conservation Cooperatives (USDOI Secretarial Order 3289, 2009; Anonymous, 2011). This Special Section explores the underlying design considerations, as well as many pragmatic aspects associated with program implementation and interpretation of results from broad-scale monitoring systems, particularly within the constraints of high-latitude contexts (e.g., low road density, short field season, dramatic fluctuations in temperature). Although Alaska is the focus of most papers in this Special Section, we posit that many of the issues that characterize the remote, relatively undisturbed ecosystems of high northern latitudes are widespread and thus applicable to natural-resource management and conservation across northern portions of the Holarctic ecozone and indeed anywhere broad-scale monitoring is contemplated.

Biological Conservation↗

Managing dredged sediment placement in open-water disposal sites, Upper Chesapeake Bay

The maintenance dredging of fine-grained sediment which accumulated in shipping channels in the Upper Chesapeake was discussed. The capacity of open-water sites was maximized in an environmentally acceptable manner to provide adequate time for the development of beneficial use or confined placement sites. The additional water column turbidity generated by dragging operations and bottom sediment movement during placement raised environmental concerns which weighted against the need to maximize capacity. The inter-agency team overseeing site management provided a mechanism to implement operational changes which maximized site capacity and insured operational use through the projected life span of the site.

Conference Paper↗

Geologic map of the South Jackson Mountains Wilderness Study Area, Humboldt County, Nevada

The Federal Land Policy and Management Act (Public Law 94-579, October 21, 1976) requires the U.S. Geological Survey and the U.S. Bureau of Mines to conduct mineral surveys on certain areas to determine their mineral values, if any, that may be present. Results must be made available to the public and be submitted to the President and the Congress. This report presents the results of a mineral survey of the South Jackson Mountains (NV-020-603) Wilderness Study Area, Humboldt County, Nevada. The South Jackson Mountains Wilderness Study Area is in south-central Humboldt County, approximately 50 miles northwest of Winnemucca, Nevada. The boundaries originally specified for the wilderness study area encompassed an area of 60,211 acres. The draft Environmental Impact Statement issued in 1983 by the U.S. Bureau of Land Management (BLM) identified 20,094 acres within the wilderness study area as potentially suitable for inclusion into the National Wilderness Preservation System. Subsequent (August 27, 1984) deletions by the BLM have resulted in the present study area of approximately 10,300 acres. The boundaries of the study area are approximated by the range crestline to the east and the 4,400-ft contour along the west side of the range from King Lear Peak north to the divide between Hobo and Christiorsson Canyons.

Nevada↗

A deposit model for carbonatite and peralkaline intrusion-related rare earth element deposits

Carbonatite and alkaline intrusive complexes, as well as their weathering products, are the primary sources of rare earth elements. A wide variety of other commodities have been exploited from carbonatites and alkaline igneous rocks including niobium, phosphate, titanium, vermiculite, barite, fluorite, copper, calcite, and zirconium. Other elements enriched in these deposits include manganese, strontium, tantalum, thorium, vanadium, and uranium. Carbonatite and peralkaline intrusion-related rare earth element deposits are presented together in this report because of the spatial, and potentially genetic, association between carbonatite and alkaline rocks. Although these rock types occur together at many locations, carbonatite and peralkaline intrusion-related rare earth element deposits are not generally found together. Carbonatite hosted rare earth element deposits are found throughout the world, but currently only five are being mined for rare earth elements: Bayan Obo, Daluxiang, Maoniuping, and Weishan deposits in China and the Mountain Pass deposit in California, United States. These deposits are enriched in light rare earth elements, including lanthanum, cerium, praseodynium, and neodynium. The principal rare earth element-minerals associated with carbonatites are fluocarbonates (bastnäsite, parisite, and synchysite), hydrated carbonates (ancylite), and phosphates (monazite) with bastnäsite being the primary ore mineral. Calcite and dolomite are the primary gangue minerals. At present, the only rare earth element production from a peralkaline intrusion-related deposit is as a byproduct commodity at the Lovozero deposit in Russia. Important rare earth element minerals found in various deposits include apatite, eudialyte, loparite, gittinsite, xenotime, gadolinite, monazite, bastnäsite, kainosite, mosandrite, britholite, allanite, fergusonite, and zircon, and these minerals tend to be enriched in heavy rare earth elements. Carbonatite and alkaline intrusive complexes are derived from partial melts of mantle material, and neodymium isotopic data are consistent with the rare earth elements being derived from the parental magma. Deposits and these associated rock types tend to occur within stable continental tectonic units, in areas defined as shields, cratons, and crystalline blocks; they are generally associated with intracontinental rift and fault systems. Protracted fractional crystallization of the magma leads to enrichment in rare earth elements and other incompatible elements. Rare earth element mineralization associated with carbonatites can occur as either primary mineral phases or as mineralization associated with late stage orthomagmatic fluids. Rare earth element mineralization associated with alkaline intrusive complexes may occur as primary phases in magmatic layered complexes or as late-stage dikes and veins. The greatest environmental challenges associated with carbonatite and peralkaline intrusion-related rare earth element deposits center on the associated uranium and thorium. Considerable uncertainty exists around the toxicity of rare earth elements and warrants further investigation. The acid-generating potential of carbonatites and peralkaline intrusion-related deposits is low due to the dominance of carbonate minerals in carbonatite deposits, the presence of feldspars and minor calcite within the alkaline intrusion deposits, and only minor quantities of potentially acid-generating sulfides. Therefore, acid-drainage issues are not likely to be a major concern associated with these deposits. Uranium has the potential to be recovered as a byproduct, which would mitigate some of its environmental effects. However, thorium will likely remain a waste-stream product that will require management since progress is not being made towards the development of thorium-based nuclear reactors in the United States or other large scale commercial uses. Because some deposits are rich in fluorine and beryllium, these elements may be of environmental concern in certain locations.

Scientific Investigations Report↗