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At least 1,495 records · Page 83Linked to original sources
USGS2000

Forecasting selenium discharges to the San Francisco Bay-Delta Estuary: Ecological effects of a proposed San Luis drain extension

During the next few years, federal and state agencies may be required to evaluate proposals and discharge permits that could significantly change selenium (Se) inputs to the San Francisco Bay-Delta Estuary (Bay-Delta), particularly in the North Bay (i.e., Suisun Bay and San Pablo Bay). These decisions may include discharge requirements for an extension of the San Luis Drain (SLD) to the estuary to convey subsurface agricultural drainage from the western San Joaquin Valley (SJV), a renewal of an agreement to allow the existing portion of the SLD to convey subsurface agricultural drainage to a tributary of the San Joaquin River (SJR) (coincident with changes in flow patterns of the lower SJR), and refinements to promulgated Se criteria for the protection of aquatic life for the estuary. Understanding the biotransfer of Se is essential to evaluating the fate and impact of proposed changes in Se discharges to the Bay-Delta. However, past monitoring programs have not addressed the specific protocols necessary for an element that bioaccumulates. Confusion about Se threats in the past have stemmed from failure to consider the full complexity of the processes that result in Se toxicity. Past studies show that predators are more at risk from Se contamination than their prey, making it difficult to use traditional methods to predict risk from environmental concentrations alone. In this report, we employ a novel procedure to model the fate of Se under different, potentially realistic load scenarios from the SJV. For each potential load, we progressively forecast the resulting environmental concentrations, speciation, transformation to particulate form, bioaccumulation by invertebrates, trophic transfer to predators, and effects in those predators. Enough is known to establish a first order understanding of effects should Se be discharged directly into the North Bay via a conveyance such as the SLD. Our approach uses 1) existing knowledge concerning the biogeochemical reactions of Se (e.g., speciation, partitioning between dissolved and particulate forms, and bivalve assimilation efficiency) and 2) site-specific data mainly from 1986 to 1996 on clams and bottom-feeding fish and birds. Forecasts of Se loading from oil refineries and agricultural drainage from the SJV enable the calculation of a composite freshwater endmember Se concentration at the head of the estuary and at Carquinez Strait as a foundation for modeling. Our analysis of effects also takes into account the mode of conveyance for agricultural drainage (i.e., the SLD or SJR). The effects of variable flows on a seasonal or monthly basis from the Sacramento River and SJR are also considered. The results of our forecasts for external SJV watershed sources of Se mirror predictions made since 1955 of a worsening salt (and by inference, Se) buildup exacerbated by the arid climate and irrigation for agricultural use. We show that the reservoir of Se in the SJV is sufficient to provide loading at an annual rate of approximately 42,500 pounds (lbs) of Se to a Bay-Delta disposal point for 63 to 304 years at the lower range of our projections, even if influx of Se from the California Coast Ranges could be curtailed. Disposal of wastewaters on an annual basis outside of the SJV may slow the degradation of valley resources, but drainage alone cannot alleviate the salt and Se buildup in the SJV, at least within a century. Our forecasts show the different proportions of Se loading to the Bay-Delta. Oil refinery loads from 1986 to 1992 ranged from 11 to 15 lbs Se per day; with treatment and cleanup, loads decreased to 3 lbs Se per day in 1999. In contrast, SJV agricultural drainage loads could range from of 45 to 117 lbs Se per day across a set of reasonable conditions. Components of this valley-wide load include five source subareas (i.e., Grassland, Westlands, Tulare, Kern, and Northern) based on water and drainage management. Loads vary per subarea mainly because of proximity of the s

California↗
USGS2002

Ecological evaluation of the abundance and effects of elk herbivory in Rocky Mountain National Park, Colorado, 1994-1999

Several National Park Service units in the Intermountain region possess a number of closely related management needs relative to the abundance of wild ungulates and their herbivory effects on plants and ecosystem processes. In 1993, the then National Biological Service (NBS) - now U.S. Geological Survey, Biological Resources Discipline (USGS, BRD)­ initiated a series of research studies in four park units in the Intermountain West., into the abundance and effects of ungulates on park ecosystems. Each of these parks received a number of similar research study elements including: (a) a number of new ungulate grazing exclosures (n = 12-21 exclosures per park); (b) aerial survey sightability models to estimate population sizes of ungulates; (e) measures of biomass production and consumption rates near the exclosures and across the landscape; (d) studies of the effects of the grazing on plant abundance, species diversity, and ecosystem effects; and (e) computer model simulations (SAVANNA) of the effects on the ecosystem and plant resources of different ungulate management scenarios. One park unit, Rocky Mountain National Park, Colorado, received funding from the U.S. Geological Survey (USGS, BRD) and parallel funding from NPS for an intensive research study of the effects of elk on the park ecosystems.

Colorado↗
USGS2002

Ecological dynamics of wetlands at Lisbon Bottom, Big Muddy National Fish and Wildlife Refuge, Missouri

The study documented the interaction between hydrology and the biological dynamics within a single spring season at Lisbon Bottom in 1999. The study goal was to provide information necessary for resource managers to develop management strategies for this and other units of the Big Muddy National Fish and Wildlife Refuge. Researchers studied the hydrology, limnology, and biological dynamics of zooplankton, macroinvertebrates, fish and waterbird communities. Lisbon Bottom is one of several parcels of 1993 flood-damaged land that was purchased from willing sellers by the U.S. Fish and Wildlife Service as part of the Big Muddy National Fish and Wildlife Refuge. Lisbon Bottom is a loop bend in the river near Glasgow in Howard County, Missouri between approximately river mile (RM) 213 to RM 219. Flooding at Lisbon in 1993 and 1995 breeched local levees and created a diverse wetland complex.

Missouri↗
USGS2007

Fish movement ecology in high gradient headwater streams: Its relevance to fish passage restoration through stream culvert barriers

Restoration of fish passage through culvert barriers has emerged as a major issue in the Pacific Northwest and nationwide, in part, because of their potential influence on fish movement. Movement is an essential mechanism by which mobile animals acquire the resources necessary for the successful completion of their life-cycles. In this report, we provide a brief review of some essential characteristics of animal movement and examples from a focal group of fishes in Washington State: salmon, trout, and char. We begin by outlining some basic characteristics of animal movement and then apply that foundation to the case of salmonid fishes. Next we consider the consequences of disrupting fish movement with human-constructed barriers, such as culverts. Finally, this body of evidence is summarized, and we propose a short list of what we view as high priority information needs to support more effective restoration of fish passage through culverts.

Open-File Report↗
USGS2008

Aspen Ecology in Rocky Mountain National Park: Age Distribution, Genetics, and the Effects of Elk Herbivory

Lack of recruitment and canopy replacement of aspen (Populus tremuloides) stands that grow on the edges of grasslands on the low-elevation elk (Cervus elaphus) winter range of Rocky Mountain National Park (RMNP) in Colorado have been a cause of concern for more than 70 years. We used a combination of traditional dendrochronology and genetic techniques as well as measuring the characteristics of regenerating and nonregenerating stands on the elk winter range to determine when and under what conditions and estimated elk densities these stands established and through what mechanisms they may regenerate. The period from 1975 to 1995 at low elevation on the east side had 80-95 percent fewer aspen stems than would be expected based on the trend from 1855 through 1965. The age structure of aspen in the park indicates that the interacting effects of fires, elk population changes, and livestock grazing had more-or-less consistent effects on aspen from 1855 to 1965. The lack of a significant change in aspen numbers in recent decades in the higher elevation and west side parts of the park supports the idea that the extensive effects of elk browsing have been more important in reducing aspen numbers than other factors. The genetic variation of aspen populations in RMNP is high at the molecular level. We expected to find that most patches of aspen in the park were composed of a single clone of genetically identical trees, but in fact just 7 percent of measured aspen patches consisted of a single clone. A large frequency of polyploid (triploid and tetraploid) genotypes were found on the low elevation, east-side elk winter range. Nonregenerating aspen stands on the winter range had greater annual offtake, shorter saplings, and lower density of mid-height (1.5-2.5 m) saplings than regenerating stands. Overwinter elk browsing, however, did not appear to inhibit the leader length of aspen saplings. The winter range aspen stands of RMNP appear to be highly resilient in the face of very intense herbivory by elk and harsh environmental conditions. Conservation efforts through fencing protection and decreased elk browsing pressure are already being planned as part of the park's new elk management plan. If these efforts are undertaken, conditions that encourage stem recruitment to the tree canopy will likely result and the continued survival of these aspen stands will be enhanced.

Open-File Report↗
USGS2009

Progress Report: Stratton Ecological Research Site - An Experimental Approach to Assess Effects of Various Grazing Treatments on Vegetation and Wildlife Communities Across Managed Burns and Habitat Controls

Understanding how management practices affect wildlife is fundamental to wise decisions for conservation of public lands. Prescribed fire and grazing timing are two management tools frequently used within publicly owned sagebrush ecosystems. We conducted a variety of surveys in order to assess the impacts of grazing timing strategies (early summer before peak green-up, mid-summer at peak green-up, and late summer after peak green-up) in conjunction with prescribed fire on avian and small mammal populations in a high-elevation sagebrush ecosystem. Avian surveys resulted in a large detection sample size for three bird species: Brewer's sparrow (Spizella breweri), horned lark (Eremophila alpestris), and vesper sparrow (Pooecetes gramineus). Brewer's sparrows had the lowest number of detections within the mid-summer grazing treatment compared to early and late summer grazing treatments, while horned larks and vesper sparrows had higher detection frequencies within the late summer grazing treatment. Summer and fall sage-grouse (Centrocercus urophasianus) pellet counts revealed that the greatest over-winter and over-summer use by sage-grouse occurred within the early summer grazing treatment with minimal use of burn treatment areas across all grazing treatments. Deer-mice (Peromyscus maniculatus) represented approximately 90 percent of small mammals captured and were most prevalent within the mid-summer grazing treatment. Sagebrush cover was greatest within the mid-summer grazing treatment. We monitored 50 and 103 nests in 2007 and 2008, respectively. The apparent success rate for shrub-obligate nesting species was 58 percent in 2007 and 63 percent in 2008. This research will support management of sagebrush ecosystems by providing public land managers with direct comparisons of wildlife response to management regimes.

Open-File Report↗
USGS2010

Microbial and geochemical investigations of dissolved organic carbon and microbial ecology of native waters from the Biscayne and Upper Floridan Aquifers

Groundwater resources in the United States are under ever-increasing demands for potable, irrigation, and recreational uses. Additionally, aquifer systems are being used or targeted for use as storage areas for treated surface waters and (or) groundwaters via injection (for example, aquifer storage and recovery). To date, the influence that the nutrients, including carbon, in the injected water have on native microbial communities and the biogeochemistry in the subsurface zones used for storage of the injectate has not been determined. In this report, we describe a series of experiments that establishes a baseline dataset for the quantity and quality of organic and inorganic carbon and nutrients in the Biscayne Aquifer (BA) and Upper Floridan Aquifer (UFA) in south Florida. The most significant differences between the BA (26 meters below surface) and UFA (366 meters below surface) are the average specific conductance (0.552 and 6.12 microsiemens per centimeter, respectively), dissolved oxygen (1.6 and 0 milligrams per liter, respectively), and oxidation-reduction potential (40.3 and -358 millivolts, respectively). The dissolved organic carbon from the BA is characterized by carbon originating from terrestrial sources and microbial activities, while the UFA has a distinctive microbial signature. Acetate and lactate are the dominant carbon constituents in both aquifers. Additionally, components of the dissolved organic carbon from the UFA have a total trihalomethane-formation potential that is approximately threefold greater than the maximum contaminat level of 80 micrograms per liter established by the U.S. Environmental Protection Agency. The average native bacterial abundances in the aquifers are similar with 4.69x10^4 cells per milliliter in the BA and 1.33x10^4 cells per milliliter in the UFA. The average bacteriophage abundances are also similar with 1.15x10^5 virus-like particles in the BA and 1.92x10^5 virus-like particles in the UFA. Interestingly, ciliated protozoa are present in both aquifers. The average abundance of ciliates in the BA (2.97x10^3 ciliates per milliliter) is approximately twentyfold greater than abundances in the UFA (1.39x10^2 ciliates per milliliter). Collectively, these data indicate that microbial processes are the dominant contributor to the cycling of carbon and inorganic carbon in the BA and may be the only carbon cycling process in the UFA, as this aquifer has not had a terrestrial influx of carbon for more than 15,000 years. The rates of carbon, in the form of acetate, utilization by the native microbial communities are significantly different between the two aquifers. Based on data from 14C-acetate-utilization experiments, the microbial communities in the BA turn over the native acetate in 2.5 years, whereas communities in the UFA turn over native acetate in 6.8 years. These data support the hypothesis derived from the microbial-abundance data, in that the carbon for bacterial maintainence and growth is recycled from bacterial biomass released during cell lysis, especially in the UFA. An in situ diffusion chamber was designed to retain bacterial cells within the chamber while allowing native water constituents to move through the chamber. A series of 1-week deployments of chambers filled with fluorescent beads, inactivated native bacteria and laboratory grown and viable bacteria into the UFA, permitted by the State of Florida Environmental Protection Agency, was successfully completed. This was the first time this type of deployment into an aquifer system that is used for potable water supply has been permitted within the United States. This technology will allow, for the first time, in situ studies on the survival of microbial indicators of fecal pollution and true pathogens in groundwater systems.

Florida↗
USGS2010

Tools and data acquisition of borehole geophysical logging for the Florida Power and Light Company Turkey Point Power Plant in support of a groundwater, surface-water, and ecological monitoring plan, Miami-Dade County, Florida

Borehole geophysical logs were obtained from selected exploratory coreholes in the vicinity of the Florida Power and Light Company Turkey Point Power Plant. The geophysical logging tools used and logging sequences performed during this project are summarized herein to include borehole logging methods, descriptions of the properties measured, types of data obtained, and calibration information.

Open-File Report↗
USGS2011

Loch Vale watershed long-term ecological research and monitoring program quality assurance report, 2003-09

The Loch Vale watershed project is a long-term research and monitoring program located in Rocky Mountain National Park that addresses watershed-scale ecosystem processes, particularly as they respond to atmospheric deposition and climate variability. Measurements of precipitation depth, precipitation chemistry, discharge, and surface-water quality are made within the watershed and elsewhere in Rocky Mountain National Park. As data collected for the program are used by resource managers, scientists, policy makers, and students, it is important that all data collected in Loch Vale watershed meet high standards of quality. In this report, data quality was evaluated for precipitation, discharge, and surface-water chemistry measurements collected during 2003-09. Equipment upgrades were made at the Loch Vale National Atmospheric Deposition Program monitoring site to improve precipitation measurements and evaluate variability in precipitation depth and chemistry. Additional solar panels and batteries have been installed to improve the power supply, and data completeness, at the NADP site. As a result of equipment malfunction, discharge data for the Loch Outlet were estimated from October 18, 2005, to August 17, 2006. Quality-assurance results indicate that more than 98 percent of all surface-water chemistry measurements were accurate and precise. Records that did not meet quality criteria were removed from the database. Measurements of precipitation depth, precipitation chemistry, discharge, and surface-water quality were all sufficiently complete and consistent to support project data needs.

Colorado↗
USGS2012

Foraging ecology of least terns and piping plovers nesting on Central Platte River sandpits and sandbars

Federally listed least terns ( Sternula antillarum ) and piping plovers ( Charadrius melodus ) nest on riverine sandbars on many major midcontinent river systems. On the Central Platte River, availability of sandbar habitat is limited, and both species nest on excavated sandpits in the river's floodplain. However, the extent to which sandpit-nesting birds use riverine habitats for foraging is unknown. We evaluated use of foraging habitats by least terns and piping plovers by collecting data on movements, behavior, foraging habitat, and productivity. We radiomarked 16 piping plovers and 23 least terns in 2009-2010 and monitored their movements using a network of fixed telemetry dataloggers. Piping plovers were detected primarily by the datalogger located in their nesting sandpit, whereas least terns were more frequently detected on dataloggers outside of the nesting sandpit. Telemetry data and behavioral observations showed that least terns tended to concentrate at the Kearney Canal Diversion Gates, where forage fish were apparently readily available. Fish sampling data suggested that forage fish were more abundant in riverine than in sandpit habitats, and behavioral observations showed that least terns foraged more frequently in riverine than in sandpit habitats. Piping plovers tended to forage in wet substrates along sandpit shorelines, but also used dry substrates and sandpit interior habitats. The greater mobility of least terns makes a wider range of potential foraging habitats available during brood rearing, making them able to exploit concentrations of fish outside the nesting colony. Thus, our data suggest that different spatial scales should be considered in managing nesting and foraging habitat complexes for piping plovers and least terns.

Nebraska↗
USGS2013

Bison grazing ecology at the Rocky Mountain Arsenal National Wildlife Refuge, Colorado

The Rocky Mountain Arsenal (RMA) National Wildlife Refuge reintroduced bison to a small pasture in 2007. Refuge managers needed information on the effects of bison grazing on vegetation communities in the bison pasture as well as information on how bison might affect other management priorities at RMA. In particular, RMA managers were interested in bison grazing effects on vegetation productivity, amount of vegetation utilization by bison, and habitat selection by bison to inform RMA herd managers and for potential expansion of bison range on the refuge. In 2007, U.S. Geological Survey (USGS) designed a study to investigate bison grazing effects through measurement of vegetation in the 600-hectare enclosure where the bison are currently pastured. This research was a collaborative effort between USGS and RMA refuge staff and had active field components in 2007 and 2010. We found that the effects and intensity of bison grazing on vegetation in the RMA bison pasture is linked to prairie dog presence. Where both species were present, they were removing a significant amount of biomass compared to areas where only bison were present. Also, prairie dogs appeared to enhance the greater production of native forbs, but we were not able to identify the mechanism for this increased production. We were not able, however, to generate an accurate vegetation map for the bison pasture, and this limited our ability to achieve the level of statistical precision necessary to identify grazing impacts and habitat selection of bison.

Colorado↗
USGS2014

Ecological implications of Laurel Wilt infestation on Everglades Tree Islands, southern Florida

There is a long history of introduced pests attacking native forest trees in the United States (Liebhold and others, 1995; Aukema and others, 2010). Well-known examples include chestnut blight that decimated the American chestnut ( Castanea dentata ), an extremely important tree in the eastern United States, both as a food source for wildlife and humans and for the wood; Dutch elm disease that attacks native elms ( Ulmus spp.), including those commonly planted as shade trees along city streets; and the balsam wooly adelgid (Adelges piceae), an insect that is destroying Fraser firs ( Abies fraseri ) in higher elevations of Great Smoky Mountains National Park. Laurel wilt, a fungal disease transmitted by the redbay ambrosia beetle (Xyleborus glabratus), is a 21st-century example of an introduced forest pest that attacks native tree species in the laurel family (Lauraceae) (Mayfield, 2007; Hulcr and Dunn, 2011). The introduction of laurel wilt disease has been traced to the arrival of an Asian ambrosia beetle ( Xyleborus glabratus ) at Port Wentworth, Georgia, near Savannah, in 2002, apparently accidently introduced in wooden shipping material (Mayfield, 2007). Within the next 2 years, it was determined that the non-native wood-boring insect was the vector of an undescribed species of fungus, responsible for killing large numbers of red bay ( Persea borbonia ) trees in the surrounding area. Dispersing female redbay ambrosia beetles drill into live trees and create tunnels in the wood. They carry with them fungal spores in specialized organs called mycangia at the base of each mandible and sow the spores in the tunnels they excavate. The fungus, since named Raffaelea lauricola (Harrington and others, 2008), is the food source for adults and larvae. The introduction of Raffaelea lauricola causes the host plant to react in such a way as to block the vascular tissue, resulting in loss of water conduction, wilt, and death (Kendra and others, 2013). Although first seen in red bay, laurel wilt disease also kills other native trees that are members of the laurel family, including swamp bay ( Persea palustris ), silk bay ( Persea borbonia var. humilis ), and sassafras ( Sassafras albidum ), as well as the economically important cultivated avocado ( Persea americana ) (Fraedrich and others, 2008). This paper is concerned primarily with swamp bay, an important component of Everglades tree islands. The spread of the redbay ambrosia beetle and its fungal symbiont has been very rapid, exceeding model predictions (Koch and Smith, 2008); by 2011, laurel wilt disease was found from the southern coastal plain of North Carolina to southern peninsular Florida. The first redbay ambrosia beetle was trapped in Miami-Dade County in March 2010, and laurel wilt disease was discovered in swamp bays in February 2011 and in commercial avocado groves about a year later (Kendra and others, 2013). By 2013, laurel wilt disease was seen in swamp bays throughout the southern Everglades in Everglades National Park, Big Cypress National Preserve, and Water Conservation Areas (WCAs) 3A and 3B (Rodgers and others, 2014).

Florida↗
USGS2015

A conceptual model for site-level ecology of the giant gartersnake ( Thamnophis gigas ) in the Sacramento Valley, California

Giant gartersnakes (Thamnophis gigas) comprise a species of semi-aquatic snakes precinctive to marshes in the Central Valley of California (Hansen and Brode, 1980; Rossman and others, 1996). Because more than 90 percent of their historical wetland habitat has been converted to other uses (Frayer and others, 1989; Garone, 2007), giant gartersnakes have been listed as threatened by the State of California (California Department of Fish and Game Commission , 1971) and the United States (U.S. Fish and Wildlife Service, 1993). Giant gartersnakes currently occur in a highly modified landscape, with most extant populations occurring in the rice - growing regions of the Sacramento Valley, especially near areas that historically were tule marsh habitat (Halstead and others, 2010, 2014). In ricelands and managed marshes, many operational decisions likely affect the health and viability of giant gartersnake populations. Land-use decisions, including the management of water, aquatic vegetation, terrestrial vegetation, and co-occurring species, have the potential to affect giant gartersnakes. Little is known, however, about the effects of these types of decisions on the viability of giant gartersnake populations. Bayesian network models are a useful tool to help guide decisions with uncertain outcomes. These models require the articulation of what experts think they know about a system, and facilitate learning about the hypothesized relations (Marcot and others, 2001; Uusitalo , 2007). Bayesian networks further provide a clear visual display of the model that facilitates understanding among various stakeholders (Marcot and others, 2001; Uusitalo , 2007). Empirical data and expert judgment can be combined, as continuous or categorical variables, to update knowledge about the system (Marcot and others, 2001; Uusitalo , 2007). Importantly, Bayesian network models allow inference from causes to consequences, but also from consequences to causes, so that data can inform the states of nodes (values of different random variables) in either direction (Marcot and others, 2001; Uusitalo , 2007). Because they can incorporate both decision nodes that represent management actions and utility nodes that quantify the costs and benefits of outcomes, Bayesian networks are ideally suited to risk analysis and adaptive management (Nyberg and others, 2006; Howes and others, 2010). Thus, Bayesian network models are useful in situations where empirical data are not available, such as questions concerning the responses of giant gartersnakes to management.

California↗