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At least 1,495 records · Page 83Linked to original sources
USGS1957

Evolution and distribution of the coregonids

Increased knowledge of the morphological and physiological plasticity of the coregonids has minimized the significance of conflicting morphological data that have retarded the development of an evolutionary theory. Of the four phyletic lines recognized through worldwide studies, Coregonus originated in the lake and stream area of northwest Eurasia, Stenodus and Prosopium evolved in the rivers of Siberia and northwest America respectively, and Leucichthys became differentiated in the lake-studded area of northeast America. Isolation and range extension were facilitated by events of the Pleistocene epoch. Inter-continental exchange most likely took place in the Bering Strait region. Representatives of each group in its area of origin are highly variable. Range extensions of each group are characterized by lesser morphological variability and at the extremes only one or two relatively stable species remain.

Journal of the Fisheries Research Board of Canada↗
USGS2002

α1-Antitrypsin polymorphism and systematics of eastern North American wolves

We used data on the polymorphic status of α 1 -antitrypsin (α 1 AT) to study the relationship of Minnesota wolves to the gray wolf ( Canis lupus ), which was thought to have evolved in Eurasia, and to red wolves ( Canis rufus ) and coyotes ( Canis latrans ), which putatively evolved in North America. Recent evidence had indicated that Minnesota wolves might be more closely related to red wolves and coyotes. Samples from wild-caught Minnesota wolves and from captive wolves, at least some of which originated in Alaska and western Canada, were similarly polymorphic for α 1 AT, whereas coyote and red wolf samples were all monomorphic. Our findings, in conjunction with earlier results, are consistent with the Minnesota wolf being a gray wolf of Eurasian origin or possibly a hybrid between the gray wolf of Eurasian origin and the proposed North American wolf.

Canadian Journal of Zoology↗
USGS2009

An evaluation of the genus Kincaidiana Altman, 1936, with the designation of Altmanella n. gen. (Annelida, Clitellata, Lumbriculidae)

A review of morphological characters for the western Nearctic genus Kincaidiana indicated that the two described species should be assigned to separate genera. Kincaidiana freidris Cook was transferred to a new genus, Altmanella. New material resembling A. freidris was obtained from many sites throughout western North America. Morphology of the male reproductive structures varied among populations, and the most distinctive morphological differences were accounted for by splitting the taxon into two species, which roughly corresponded to large scale regional patterns. Typical A. freidris occurred in several Pacific Coast drainages. Altmanella idahoensis n. sp., mostly associated with the Snake River drainage, was distinguished from A. freidris by shorter and less muscular atria and penial structures. A second new lumbriculid species with the same basic arrangement of reproductive organs was collected in southeastern North America, and was provisionally assigned to Altmanella. However, in contrast to the petiolate atria and large penial structures of A. freidris and A. idahoensis, Altmanella lenati n. sp. has tubular atria and simple male porophores.

Zootaxa↗
USGS2020

A new species of freshwater mussel in the genus Popenaias Frierson, 1927, from the Gulf coastal rivers of central Mexico (Bivalvia: Unionida: Unionidae) with comments on the genus

The Gulf coastal drainages of central Mexico are a faunal transition zone between North and South America and harbor a unique assemblage of freshwater mussels (Bivalvia: Unionida). However, little information is available regarding the taxonomy, distribution, and evolutionary history of the Mexican mussel fauna due to limited sampling over the last 100 years. To address these knowledge gaps, we evaluated species-level diversity in the genus Popenaias Frierson, 1927, in Mexican Gulf coastal drainages as part of a larger effort to inform conservation efforts for members of this genus both in Mexico and the United States of America. Based on our analyses, we describe Popenaias berezai n. sp. from the Río Valles of the Río Pánuco basin, San Luis Potosí, Mexico. We also provide presumptive distributional range, phylogenetic structure, and molecular and morphological diagnoses of the new species and provide comments on the other species currently in Popenaias . Our findings highlight the high levels of endemism among freshwater mussels in Mexican Gulf coastal drainages and will help guide impending conservation actions for P. popeii , which is listed as “endangered” in the United States.

Gulf Coast↗
USGS1995

Large-scale atmospheric forcing of recent trends toward early snowmelt runoff in California

Since the late 1940s, snowmelt and runoff have come increasingly early in the water year in many basins in northern and central California. This subtle trend is most pronounced in moderate-altitude basins, which are sensitive to changes in mean winter temperatures. Such basins have broad areas in which winter temperatures are near enough to freezing that small increases result initially in the formation of less snow and eventually in early snowmelt. In moderate-altitude basins of California, a declining fraction of the annual runoff has come in April–June. This decline has been compensated by increased fractions of runoff at other, mostly earlier, times in the water year. Weather stations in central California, including the central Sierra Nevada, have shown trends toward warmer winters since the 1940s. A series of regression analyses indicate that runoff timing responds equally to the observed decadal-scale trends in winter temperature and interannual temperature variations of the same magnitude, suggesting that the temperature trend is sufficient to explain the runoff-timing trends. The immediate cause of the trend toward warmer winters in California is a concurrent, long-term fluctuation in winter atmospheric circulations over the North Pacific Ocean and North America that is not immediately distinguishable from natural atmospheric variability. The fluctuation began to affect California in the 1940s, when the region of strongest low-frequency variation of winter circulations shifted to a part of the central North Pacific Ocean that is teleconnected to California temperatures. Since the late 1940s, winter wind fields have been displaced progressively southward over the central North Pacific and northward over the west coast of North America. These shifts in atmospheric circulations are associated with concurrent shifts in both West Coast air temperatures and North Pacific sea surface temperatures.

California↗
USGS2001

Changes in the Onset of Spring in the Western United States

Fluctuations in spring climate in the western United States over the last 4-5 decades are described by examining changes in the blooming of plants and the timing of snowmelt-runoff pulses. The two measures of spring's onset that are employed are the timing of first bloom of lilac and honeysuckle bushes from a long-term cooperative phonological network, and the timing of the first major pulse of snowmelt recorded from high-elevation streams. Both measures contain year-to-year fluctuations, with typical year-to-year fluctuations at a given site of one to three weeks. These fluctuations are spatially coherent, forming regional patterns that cover most of the west. Fluctuations in lilac first bloom dates are highly correlated to those of honeysuckle, and both are significantly correlated with those of the spring snowmelt pulse. Each of these measures, then, probably respond to a common mechanism. Various analyses indicate that anomalous temperature exerts the greatest influence upon both interannual and secular changes in the onset of spring in these networks. Earlier spring onsets since the late 1970s are a remarkable feature of the records, and reflect the unusual spell of warmer-than-normal springs in western North America during this period. The warm episodes are clearly related to larger-scale atmospheric conditions across North America and the North Pacific, but whether this is predominantly an expression of natural variability or also a symptom of global warming is not certain.

Bulletin of the American Meteorological Society↗
USGS2008

Joint variability of global runoff and global sea surface temperatures

Global land surface runoff and sea surface temperatures (SST) are analyzed to identify the primary modes of variability of these hydroclimatic data for the period 1905-2002. A monthly water-balance model first is used with global monthly temperature and precipitation data to compute time series of annual gridded runoff for the analysis period. The annual runoff time series data are combined with gridded annual sea surface temperature data, and the combined dataset is subjected to a principal components analysis (PCA) to identify the primary modes of variability. The first three components from the PCA explain 29% of the total variability in the combined runoff/SST dataset. The first component explains 15% of the total variance and primarily represents long-term trends in the data. The long-term trends in SSTs are evident as warming in all of the oceans. The associated long-term trends in runoff suggest increasing flows for parts of North America, South America, Eurasia, and Australia; decreasing runoff is most notable in western Africa. The second principal component explains 9% of the total variance and reflects variability of the El Ni??o-Southern Oscillation (ENSO) and its associated influence on global annual runoff patterns. The third component explains 5% of the total variance and indicates a response of global annual runoff to variability in North Aflantic SSTs. The association between runoff and North Atlantic SSTs may explain an apparent steplike change in runoff that occurred around 1970 for a number of continental regions.

Journal of Hydrometeorology↗
USGS2021

Spectral damping scaling factors for horizontal components of ground motions from subduction earthquakes using NGA-Subduction data

This article develops global models of damping scaling factors (DSFs) for subduction zone earthquakes that are functions of the damping ratio, spectral period, earthquake magnitude, and distance. The Next Generation Attenuation for subduction earthquakes (NGA-Sub) project has developed the largest uniformly processed database of recorded ground motions to date from seven subduction regions: Alaska, Cascadia, Central America and Mexico, South America, Japan, Taiwan, and New Zealand. NGA-Sub used this database to develop new ground motion models (GMMs) at a reference 5% damping ratio. We worked with the NGA-Sub project team to develop an extended database that includes pseudo-spectral accelerations (PSA) for 11 damping ratios between 0.5% and 30%. We use this database to develop parametric models of DSF for both interface and intraslab subduction earthquakes that can be used to adjust any subduction GMM from a reference 5% damping ratio to other damping ratios. The DSF is strongly influenced by the response spectral shape and the duration of motion; therefore, in addition to the damping ratio, the median DSF model uses spectral period, magnitude, and distance as surrogate predictor variables to capture the effects of the spectral shape and the duration of motion. We also develop parametric models for the standard deviation of DSF. The models presented in this article are for the RotD50 horizontal component of PSA and are compared with the models for shallow crustal earthquakes in active tectonic regions. Some noticeable differences arise from the considerably longer duration of interface records for very large magnitude events and the enriched high-frequency content of intraslab records, compared with shallow crustal earthquakes. Regional differences are discussed by comparing the proposed global models with the data from each subduction region along with recommendations on the applicability of the models.

Earthquake Spectra↗
USGS2021

NGA-subduction global ground motion models with regional adjustment factors

We develop semi-empirical ground motion models (GMMs) for peak ground acceleration, peak ground velocity, and 5%-damped pseudo-spectral accelerations for periods from 0.01 to 10 s, for the median orientation-independent horizontal component of subduction earthquake ground motion. The GMMs are applicable to interface and intraslab subduction earthquakes in Japan, Taiwan, Mexico, Central America, South America, Alaska, the Aleutian Islands, and Cascadia. The GMMs are developed using a combination of data inspection, data regression with respect to physics-informed functions, ground-motion simulations, and geometrical constraints for certain model components. The GMMs capture observed differences in source and path effects for interface and intraslab events, conditioned on moment magnitude, rupture distance, and hypocentral depth. Site effect and aleatory variability models are shared between event types. Regionalized GMM components include the model constant (that controls ground motion amplitude), anelastic attenuation, magnitude-scaling break point, linear site response, and sediment depth terms. We develop models for the aleatory between-event variability ( τ ) "> ( τ ) , within-event variability ( ϕ ) "> ( ϕ ) , single-station within-event variability ( ϕ SS ) "> ( ϕ SS ) , and site-to-site variability ( ϕ S 2 S ) "> ( ϕ S 2 S ) . Ergodic analyses should use the median GMM and aleatory variability computed using the between-event and within-event variability models. An analysis incorporating non-ergodic site response should use the median GMM at the reference shear-wave velocity condition, a site-specific site response model, and aleatory variability computed using the between-event and single-station within-event variability models. Epistemic uncertainty in the median model is represented by standard deviations on the regional model constants, which facilitates scaled-backbone representations of model uncertainty in hazard analyses.

Earthquake Spectra↗
USGS2021

NGA-Subduction research program

This article summarizes the Next Generation Attenuation (NGA) Subduction (NGA-Sub) project, a major research program to develop a database and ground motion models (GMMs) for subduction regions. A comprehensive database of subduction earthquakes recorded worldwide was developed. The database includes a total of 214,020 individual records from 1,880 subduction events, which is by far the largest database of all the NGA programs. As part of the NGA-Sub program, four GMMs were developed. Three of them are global subduction GMMs with adjustment factors for up to seven worldwide regions: Alaska, Cascadia, Central America and Mexico, Japan, New Zealand, South America, and Taiwan. The fourth GMM is a new Japan-specific model. The GMMs provide median predictions, and the associated aleatory variability, of RotD50 horizontal components of peak ground acceleration, peak ground velocity, and 5%-damped pseudo-spectral acceleration (PSA) at oscillator periods ranging from 0.01 to 10 s. Three GMMs also quantified “within-model” epistemic uncertainty of the median prediction, which is important in regions with sparse ground motion data, such as Cascadia. In addition, a damping scaling model was developed to scale the predicted 5%-damped PSA of horizontal components to other damping ratios ranging from 0.5% to 30%. The NGA-Sub flatfile, which was used for the development of the NGA-Sub GMMs, and the NGA-Sub GMMs coded on various software platforms, have been posted for public use.

Earthquake Spectra↗
USGS2008

Tracing the first steps of American sturgeon pioneers in Europe

Background. A Baltic population of Atlantic sturgeon was founded ???1,200 years ago by migrants from North America, but after centuries of persistence, the population was extirpated in the 1960s, mainly as a result of over-harvest and habitat alterations. As there are four genetically distinct groups of Atlantic sturgeon inhabiting North American rivers today, we investigated the genetic provenance of the historic Baltic population by ancient DNA analyses using mitochondrial and nuclear markers. Results. The phylogeographic signal obtained from multilocus microsatellite DNA genotypes and mitochondrial DNA control region haplotypes, when compared to existing baseline datasets from extant populations, allowed for the identification of the region-of-origin of the North American Atlantic sturgeon founders. Moreover, statistical and simulation analyses of the multilocus genotypes allowed for the calculation of the effective number of individuals that originally founded the European population of Atlantic sturgeon. Our findings suggest that the Baltic population of A. oxyrinchus descended from a relatively small number of founders originating from the northern extent of the species' range in North America. Conclusion. These results demonstrate that the most northerly distributed North American A. oxyrinchus colonized the Baltic Sea ???1,200 years ago, suggesting that Canadian specimens should be the primary source of broodstock used for restoration in Baltic rivers. This study illustrates the great potential of patterns obtained from ancient DNA to identify population-of-origin to investigate historic genotype structure of extinct populations. ?? 2008 Ludwig et al; licensee BioMed Central Ltd.

BMC Evolutionary Biology↗
USGS2013

White-nose syndrome in bats: Illuminating the darkness

Happy ten-year anniversary to BMC Biology! We can attest to the effectiveness of the journal in reaching a great diversity of scientists based on reader responses to our commentary [1] about bat white-nose syndrome (WNS) two years ago. WNS is still on course to rank among the most destructive wildlife diseases to emerge in recent history, and it has continued to have unprecedented effects on populations of hibernating bats in eastern North America. At the time of our last writing in November 2010, the cold-adapted fungus then presumed to cause WNS ( Geomyces destructans ) had spread about 1,300 km from an index site in New York (Figure 1). In those early years of the epizootic, WNS caused a staggering wave of mass mortality among all six species of hibernating bats that occur in north-eastern North America. Since November 2010, WNS has spread into eight additional US states and two more Canadian provinces (Figure 1), and has continued to cause mortality in those six species most affected during the early years of the epizootic. Although part of a mostly tragic story has continued to unfold as new areas are affected, anecdotal signs are emerging that all may not be lost when it comes to hibernating bats and WNS. Amid the continued large-scale population declines of certain species, we have yet to see mass mortality in some of the more westerly areas where the fungus was detected two winters ago (Figure 1). Also, recently disease without obvious mortality was diagnosed in gray bats ( Myotis grisescens ) - an endangered species thought by many two years ago to be at high risk of extinction from WNS. Clearly, large gaps in our understanding of WNS remain, but some have been filled since we last communicated with readers of BMC Biology.

BMC Biology↗
USGS2013

Evolution of a reassortant North American gull influenza virus lineage: drift, shift and stability

Background: The role of gulls in the ecology of avian influenza (AI) is different than that of waterfowl. Different constellations of subtypes circulate within the two groups of birds and AI viruses isolated from North American gulls frequently possess reassortant genomes with genetic elements from both North America and Eurasian lineages. A 2008 isolate from a Newfoundland Great Black-backed Gull contained a mix of North American waterfowl, North American gull and Eurasian lineage genes. Methods: We isolated, sequenced and phylogenetically compared avian influenza viruses from 2009 Canadian wild birds. Results: We analyzed six 2009 virus isolates from Canada and found the same phylogenetic lineage had persisted over a larger geographic area, with an expanded host range that included dabbling and diving ducks as well as gulls. All of the 2009 virus isolates contained an internal protein coding set of genes of the same Eurasian lineage genes except PB1 that was from a North American lineage, and these genes continued to evolve by genetic drift. We show evidence that the 2008 Great Black-backed Gull virus was derived from this lineage with a reassortment of a North American PA gene into the more stable core set of internal protein coding genes that has circulated in avian populations for at least 2 years. From this core, the surface glycoprotein genes have switched several times creating H13N6, H13N2, and H16N3 subtypes. These gene segments were from North American lineages except for the H16 and N3 vRNAs. Conclusions: This process appears similar to genetic shifts seen with swine influenza where a stable "triple reassortant internal gene" core has circulated in swine populations with genetic shifts occurring with hemaggluttinin and neuraminidase proteins getting periodically switched. Thus gulls may serve as genetic mixing vessels for different lineages of avian influenza, similar to the role of swine with regards to human influenza. These findings illustrate the need for continued surveillance in gull and waterfowl populations, both on the Pacific and especially Atlantic coasts of North America, to document virus intercontinental movement and the role of gull species in the evolution and epidemiology of AI.

Virology Journal↗
USGS2014

Comparison of survival patterns of northern and southern genotypes of the North American tick Ixodes scapularis (Acari: Ixodidae) under northern and southern conditions

Background Several investigators have reported genetic differences between northern and southern populations of Ixodes scapularis in North America, as well as differences in patterns of disease transmission. Ecological and behavioral correlates of these genetic differences, which might have implications for disease transmission, have not been reported. We compared survival of northern with that of southern genotypes under both northern and southern environmental conditions in laboratory trials. Methods Subadult I. scapularis from laboratory colonies that originated from adults collected from deer from several sites in the northeastern, north central, and southern U.S. were exposed to controlled conditions in environmental chambers. Northern and southern genotypes were exposed to light:dark and temperature conditions of northern and southern sites with controlled relative humidities, and mortality through time was recorded. Results Ticks from different geographical locations differed in survival patterns, with larvae from Wisconsin surviving longer than larvae from Massachusetts, South Carolina or Georgia, when held under the same conditions. In another experiment, larvae from Florida survived longer than larvae from Michigan. Therefore, survival patterns of regional genotypes did not follow a simple north–south gradient. The most consistent result was that larvae from all locations generally survived longer under northern conditions than under southern conditions. Conclusions Our results suggest that conditions in southern North America are less hospitable than in the north to populations of I. scapularis . Southern conditions might have resulted in ecological or behavioral adaptations that contribute to the relative rarity of I. scapularis borne diseases, such as Lyme borreliosis, in the southern compared to the northern United States.

Parasites & Vectors↗
USGS2015

Introduction to special section: China shale gas and shale oil plays

In the last 10 years, the success of shale gas and shale oil productions as a result of technological advances in horizontal drilling, hydraulic fracturing and nanoscale reservoir characterization have revolutionized the energy landscape in the United States. Resource assessment by the China Ministry of Land and Resources in 2010 and 2012 and by the U.S. Energy Information Administration in 2011 and 2013 indicates China’s shale gas resource is the largest in the world and shale oil resource in China is also potentially significant. Inspired by the success in the United States, China looks forward to replicating the U.S. experience to produce shale gas to power its economy and reduce greenhouse gas emissions. By 2014, China had drilled 400 wells targeting marine, lacustrine, and coastal swamp transitional shales spanning in age from the Precambrian to Cenozoic in the last five years. So far, China is the leading country outside of North America in the viable production of shale gas, with very promising prospects for shale gas and shale oil development, from the Lower Silurian Longmaxi marine shale in Fuling in the southeastern Sichuan Basin. Geological investigations by government and academic institutions as well as exploration and production activities from industry indicate that the tectonic framework, depositional settings, and geomechanical properties of most of the Chinese shales are more complex than many of the producing marine shales in the United States. These differences limit the applicability of geologic analogues from North America for use in Chinese shale oil and gas resource assessments, exploration strategies, reservoir characterization, and determination of optimal hydraulic fracturing techniques. Understanding the unique features of the geology, shale oil and gas resource potential, and reservoir characteristics is crucial for sweet spot identification, hydraulic fracturing optimization, and reservoir performance prediction. Even though China shale gas and shale oil exploration is still in an early stage, limited data are already available. We are pleased to have selected eight high-quality papers from fifteen submitted manuscripts for this timely section on the topic of China shale gas and shale oil plays. These selected papers discuss various subject areas including regional geology, resource potentials, integrated and multidisciplinary characterization of China shale reservoirs (geology, geophysics, geochemistry, and petrophysics) China shale property measurement using new techniques, case studies for marine, lacustrine, and transitional shale deposits in China, and hydraulic fracturing. One paper summarizes the regional geology and different tectonic and depositional settings of the major prospective shale oil and gas plays in China. Four papers concentrate on the geology, geochemistry, reservoir characterization, lithologic heterogeneity, and sweet spot identification in the Silurian Longmaxi marine shale in the Sichuan Basin in southwest China, which is currently the primary focus of shale gas exploration in China. One paper discusses the Ordovician Salgan Shale in the Tarim Basin in northwest China, and two papers focus on the reservoir characterization and hydraulic fracturing of Triassic lacustrine shale in the Ordos Basin in northern China. Each paper discusses a specific area.

Interpretation↗
USGS2009

A review of the role of contaminants in amphibian declines

For the past decade, there has been growing concern about worldwide declines in amphibian populations, 1,2 and a general phenomenon of declining populations was recognized in the mid-1990's. Subsequent research has validated this concern. 3,4 These population declines have been defined either as decreases in numbers of individuals in an area or, preferably because of greater reliability, a decrease in the number of sites occupied by breeding amphibians. Widespread population declines have occurred in North America, 5-7 Europe, 3,8,9 Australia, 10 and Central and South America. 11,12 Population declines in eastern Europe, Asia, and Africa have been suggested but are not as well documented. Worldwide, more than 500 populations of frogs and salamanders have been listed as declining or of concern. 4,13 In the United States, a third of known amphibian species are thought to be in trouble.14 While the most severely affected populations are in the mountains of the western United States, serious declines have also been observed among some species in the Midwest and Southeast. 2

Book chapter↗
USGS2000

Late Albian Kiowa-Skull Creek marine transgression, lower Dakota Formation, eastern margin of Western Interior Seaway, U.S.A

An integrated geochemical-sedimentological project is studying the paleoclimatic and paleogeographic characteristics of the mid-Cretaceous greenhouse world of western North America. A critical part of this project, required to establish a temporal framework, is a stratigraphic study of depositional relationships between the Albian-Cenomanian Dakota and the Upper Albian Kiowa formations of the eastern margin of the Western Interior Seaway (WIS). Palynostratigraphic and sedimentologic analyses provide criteria for the Dakota Formation to be divided into three sedimentary sequences bounded by unconformities (D 0 , D 1 , and D 2 ) that are recognized from western Iowa to westernmost Kansas. The lowest of these sequences, defined by unconformities D 0 and D 1 , is entirely Upper Albian, and includes the largely nonmarine basal Dakota (lower part of the Nishnabotna Member) strata in western Iowa and eastern Nebraska and the marine Kiowa Formation to the southwest in Kansas. The gravel-rich fluvial deposits of the basal part of the Nishnabotna Member of the Dakota Formation correlate with transgressive marine shales of the Kiowa Formation. This is a critical relationship to establish because of the need to correlate between marine and nonmarine strata that contain both geochronologic and paleoclimatic proxy data. The basal gravel facies (up to 40 m thick in western Iowa) aggraded in incised valleys during the Late Albian Kiowa-Skull Creek marine transgression. In southeastern Nebraska, basal gravels intertongue with carbonaceous mudrocks that contain diverse assemblages of Late Albian palynomorphs, including marine dinoflagellates and acritarchs. This palynomorph assemblage is characterized by occurrences of palynomorph taxa not known to range above the Albian Kiowa-Skull Creek depositional cycle elsewhere in the Western Interior, and correlates to the lowest of four generalized palynostratographic units that are comparable to other palynological sequences elsewhere in North America. Tidal rhythmites in mudrocks at the Ash Grove Cement Quarry in Louisville (Cass County), Nebraska record well-developed diurnal and semimonthly tidal cycles, and moderately well developed semiannual cycles. These tidal rhythmites are interpreted to have accumulated during rising sea level at the head of a paleoestuary that experienced at least occasional mesotidal conditions. This scenario places the gravel-bearing lower part of the Nishnabotna Member of the Dakota Formation in the mouth of an incised valley of an Upper Albian transgressive systems tract deposited along a tidally influenced coast. Furthermore, it provides a depositional setting consistent with the biostratigraphic correlation of the lower part of the Nishnabotna Member of the Dakota Formation to the marine Kiowa Formation of Kansas.

Iowa↗
USGS2003

Phylogeny and biogeography of Pacific Rubus subgenus Idaeobatus (Rosaceae) species: Investigating the origin of the endemic Hawaiian raspberry R. macraei

The endemic Hawaiian raspberries Rubus hawaiensis and R. macraei (both subgenus Idaeobatus ) had been thought to be closely related species until recent molecular studies demonstrated otherwise. These studies suggest that they are the products of separate colonizations to the Hawaiian Islands. Affinities of R. hawaiensis to R. spectabilis of western North America were clearly confirmed. However, no clear relation to R. macraei has been published. This study was initiated to examine species of subg. Idaeobatus from the surrounding Pacific region as well as species from other subgenera to better evaluate biogeographic and phylogenetic affinities of R. macraei by means of chromosome analysis and molecular data using the chloroplast gene ndbF . Results show that R. macraei clusters in a clade with species of blackberries, subg. Rubus , and of these it is most closely linked to R. ursinus . Chromosomally, R. macraei is 2 n = 6 x = 42, a number that would be a new report for subg. Idaeobatus . However, polyploidy is common in subg. Rubus . Analyses indicate that R. macraei and R. hawaiensis are derived from separate colonizations from North America and that similarities between them are due to convergent evolution in the Hawaiian environment.

Hawai'i↗