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USGS2026

A Lake Charr pangenome reveals highly conserved Ohnologs as drivers of phenotypic diversity

Whole-genome duplication (WGD) is hypothesized to spur evolutionary diversification by producing genome-wide duplicate gene sets (Ohnologs) that are initially functionally redundant but can diverge markedly as the effects of relaxed selection accumulate over time. However, the underlying mechanisms remain unclear, in part because genomic studies often reconstruct Ohnolog evolution over millions of years, during which subsequent mutations can obscure deep-time signals. Investigating the relationship between Ohnolog evolution and diversification on a contemporary timescale offers clearer insights. We explore this relationship in Lake Charr ( Salvelinus namaycush ), where ∼10% of genes are retained highly conserved polyploid duplicates following the Salmonid-Specific Fourth Round WGD. Using 31 chromosome-level assemblies of Lake Charr from morphologically and ecologically diverse populations, joined into a pangenome graph, we characterized 189,555 structural variants (SVs) that were significantly less likely to affect genes retained as sequence-conserved Ohnolog pairs, nuancing the hypothesis that gene redundancy, relaxed selection, and functional diversification are intertwined. However, we found that SVs affecting such conserved Ohnologs may be potent drivers of adaptive evolution. Notably, we identified a putative 938-Kb interchromosomal translocation containing 25 genes with highly conserved Ohnologs in a paralogous (but untranslocated) genomic block. This putative translocation appears to have facilitated Ohnolog divergence in ankrd11 and hp , genes putatively linked to craniofacial and lipid metabolic diversity in sympatric Lake Superior morphs. This research reveals that conserved Ohnologs previously presumed to be redundant remain a reservoir for adaptive change.

BioRxiv↗
USGS2024

Earthquake scenario development in conjunction with the 2023 USGS National Seismic Hazard Model

We present earthquake scenarios developed to accompany the release of the 2023 update to the US Geological Survey National Seismic Hazard Model (NSHM). Scenarios can serve a range of local and regional needs, from developing proactive-targeted mitigation strategies for minimizing impending risk to aiding emergency management planning. These deterministic scenarios can also be used to communicate seismic hazard and risk to audiences who are not well versed in methods, such as probabilistic seismic hazard analyses. Specifically, we discuss the scenarios developed, challenges, and lessons learned in the development process, and how this work aided the development of the 2023 NSHM itself. In total, 28 scenarios were developed for Hawaii, Utah, Alaska, and Virginia considering the 2023 NSHM science, past scenario efforts, and input from local experts and stakeholders. Finally, we investigate how NSHM modeling decisions can change estimated impacts to Utah and Hawaii in more detail showing, for example, that a shallower dip of the Wasatch fault under Salt Lake City can increase predicted ground-motion intensities and therefore estimated losses and deaths.

Earthquake Spectra↗
USGS2025

Strong shaking from past Cascadia Subduction Zone earthquakes encoded in coastal landforms

Strong earthquakes along subduction zones are often devastating events, but sparse records along some tectonic margins limit our understanding of seismic hazards. Constraining shaking intensities is critical, especially in subduction zones with infrequent but large-magnitude earthquakes like the Cascadia Subduction Zone (CSZ), where the lack of recorded ground motions has led to uncertainty in the severity and potential impacts of future earthquakes. Here we fill this observational gap with a novel inventory of quantitative estimates of past shaking intensities from geotechnical modeling of coastal landforms. One hundred fifty-four deep-seated landslides and 65 fragile geologic features constrain minimum and maximum peak ground accelerations, respectively. These estimates are broadly consistent with model predictions of M9 ruptures, suggesting strong shaking of 0.4–0.8 g during past CSZ earthquakes. Local discrepancies between our geologic shaking constraints and earthquake simulations may inform past rupture behavior, leading to better predictions of shaking intensity for future earthquakes.

California, Oregon, Washington↗
USGS2025

Annual NLCD (National Land Cover Database)—The next generation of land cover mapping

Introduction The widely used National Land Cover Database (NLCD) has long been the foundational land cover source for scientists, resource managers, and decision makers across the United States. In 2024, a reinvention as Annual NLCD added the key improvement of annual time steps to show decades of change at a higher frequency than the intervals of 2–3 years used in the legacy NLCD. Annual NLCD was derived primarily from the long Landsat satellite data record, and it includes data from other sources. The first release in 2024 of Annual NLCD provides Collection 1.0 of products encompassing land cover and land change from 1985 through 2023 for the conterminous United States (CONUS). The Annual NLCD Collection 1.0 consists of six operational products that map the unique characteristics of land cover. A map created from Annual NLCD shows 16 land cover classes for the CONUS in 2023.

conterminous United States↗
USGS2024

Summary of annual repeat magnetotelluric surveys of the Geysers geothermal field

As part of a multi-year project, funded by the California Energy Commission, annual magnetotelluric (MT) surveys have been collected at The Geysers geothermal field in northern California with the goal of measuring temporal changes within the steam field. The repeat surveys started in 2021 and repeated a 2017 survey (Peacock et al., 2020) with further extension to the southern part of the geothermal field. Temporal variations in the MT transfer functions are observed to be spatially coherent and compartmentalized. Mapping residual phase tensor ellipses demonstrates the direction of maximum change is often aligned with existing fracture orientations. Three dimensional inversion of the MT data, using the inversion results from previous years as the starting model, indicates that the steam reservoir has generally become more resistive over time (~10%), suggesting more steam in the field. A few pockets within the steam field have become more electrically conductive over time and are collocated with injection wells, suggesting either more fluid content in those zones, less steam, or more saline fluids.

California↗
USGS2024

Reduced injection rates and shallower depths mitigated induced seismicity in Oklahoma

The proximity of wastewater disposal to the Precambrian basement is a critical factor influencing induced earthquake rates in the Central United States, but the impact of reducing injection depths has not been widely demonstrated. Beginning in 2015, state regulatory efforts in Oklahoma and Kansas mandated that wells injecting into the lower Arbuckle Group, a basal sedimentary unit, be backfilled with cement (i.e. “plugged back”) so that they inject into shallower formations. This plug back activity gives us a unique opportunity to investigate the relationship between injection depth and induced seismicity rate. To evaluate the impact that decreased injection rates and plug backs had on the seismicity rates, we create a suite of rate-state earthquake models. Observed seismicity rates are best fit when only lower Arbuckle volumes are considered, suggesting the lower Arbuckle injectors were primarily responsible for the seismicity and that plug backs were effective at isolating the injected volumes to shallower formations. Our models demonstrate that if these wells had not been plugged back, seismicity rates would be multiple times larger than they are today. We find that the combination of well plug backs and injection volume decreases can be effective strategies for reducing induced seismicity rates.

Oklahoma↗
USGS2025

An exploration of the relative influence of physical models for Omori’s law

Omori’s law states that the rate of aftershocks decays as a function of inverse time. There are multiple physical explanations that we reduce into a nonlinear mixed effects relation of three terms: (1) a Rate/State expression that can account for static/dynamic and viscoelastic triggering caused directly by the mainshock, (2) a fluid diffusion triggering term, and (3) a randomized secondary triggering (cascade) term. We fit free physical-model parameters to an observed aftershock sequence through two nonlinear regression methods to find the relative contributions of physics-based models in an observed aftershock sequence. Results from both methods show that Rate/State models overpredict aftershock rates by ∼0–30%. Secondary aftershocks cause a net negative contribution (seismicity rate reduction that corrects overprediction by other terms) ranging between ∼0 and 30%. All regression solutions yield negative secondary triggering contributions without being guided to do so. A physical explanation for this is that aftershock occurrence relieves stress from the crust, ultimately causing the sequence to extinguish itself. Fluid diffusion triggering contributions range from ∼0 to 20%. Diffusion processes are observed to be shorter in time than the full duration of an aftershock sequence and they are also spatially limited, diminishing their influence. Our results apply to an aftershock decay curve from the 2016 Central Apennines earthquake sequence, meaning that our specific results may not be general. Our primary conclusion is that any one physical model cannot alone fit the observed sequence as well as the combination of three we investigated.

Frontiers in Earth Science↗
USGS2024

Simulated ground-motion records for the seismic assessment of monumental masonry structures

Earthquakes are natural disasters that can cause widespread devastation and loss of life. Simulated ground-motion records can be useful in regions with limited seismic stations or a history of damaging but infrequent earthquakes. This is especially true in areas with a high concentration of heritage masonry structures, which are especially susceptible to damage, as simulated records can be crucial in predicting their seismic response and protecting these buildings from seismic damage. Despite the importance of simulated earthquakes, few studies have investigated how effective they are compared to real earthquakes when assessing the structural response of heritage buildings. To address this knowledge gap, we employ two different simulation methods of the Mw 6.2 Faial earthquake, which occurred on July 9th, 1998, in the Azores, to replicate the recorded time-series at four available stations within an epicentral distance of 150 km. The study has two objectives: first, to validate the simulated records of the 1998 Faial earthquake using alternative stochastic ground-motion simulation approaches, and second, to determine how these approaches impact the seismic assessment of historic masonry structures. To accomplish these objectives, this study uses real and simulated ground-motion datasets to conduct non-linear response history analyses of the São Francisco Church, a monumental structure in Horta that sustained damage during the Faial earthquake. The results show that both simulation approaches yield structural responses similar to the observed records.

Conference Paper↗
USGS2025

Memory and jamming in fault zone sediments

Many subsurface processes involve transitions in granular material states, from arrested to creeping to flowing. Experiments and frameworks for idealized systems reveal that granular fabrics develop during shearing, co-evolve with applied stress, and govern such transitions. We use microtomography to test whether fabrics at two San Andreas fault sites reflect slip history and whether idealized frameworks extend to nature. Near-surface sediments within the fault zone transition between deformation patterns over the seismic cycle, including bulk/localized grain re-arrangements, individual grain fracturing, and localized zones of fracturing. Aseismic and co-seismic shearing produce distinct preferred grain orientations. Co-seismic fabrics can be preserved after centuries of aseismic strain, aseismic fabrics may be overprinted, and grain size and coordination number influence the fabrics. Idealized frameworks, namely anisotropic critical state theory, frictional jamming, and material memory, can explain our observations, and fault zone sediments likely undergo cycles of memory creation and erasure that influence rigidity spatiotemporally.

California↗
USGS2026

Testing characteristic magnitude distributions in modern PSHA models

The characteristic magnitude distribution hypothesis predicts a higher rate of large earthquakes than a Gutenberg–Richter extrapolation of the small‐earthquake rate would imply. Characteristic magnitude distributions have been commonly applied to faults in probabilistic seismic hazard analysis (PSHA), and in modern models they can emerge from the way short‐term seismicity constraints are combined with long‐term geologic and geodetic constraints. We test the characteristic magnitude distribution hypothesis by comparing the fault‐based magnitude distributions from the 2023 update to the National Seismic Hazard Model (NSHM23) in the Western United States with observed seismicity over the past 93 yr. We find that observed magnitude distributions fall outside the model‐predicted confidence bounds in regions where NSHM23 produces characteristic magnitude distributions: in these regions, the model predicts higher rates of large earthquakes than are observed. An analysis of the earlier California model (Uniform California Earthquake Rupture Forecast, version 3) also reveals discrepancies between the modeled and observed magnitude distributions. In addition, we find that observed magnitude distributions near modeled faults are not significantly different from those in background regions. These results challenge the prevalence of characteristic magnitude distributions in fault‐based seismic hazard models and call for a reassessment of how disparate data sets are integrated in PSHA.

western United States↗
USGS2026

Transit time modeling framework for predicting freshwater salinization in urban catchments

The salinity of inland freshwaters is rising globally, particularly in urban watersheds where winter road deicers are widely applied. Attributing stream salinity dynamics to specific sources and transport pathways remains challenging due to episodic salt inputs, engineered drainage, and strong coupling between hydrology and subsurface storage. We present a modeling framework that couples climate-driven deicer build-up and wash-off with transient transit time distribution theory to simulate salt transport through drainage, interflow, and groundwater pathways. Applied to an urban watershed in Northern Virginia (USA), the model reproduces ten years of high-frequency stream salinity measurements across daily-to-decadal timescales. The calibrated model implies an average deicer application of 206 tonnes Cl −1 yr −1 , or roughly one 20 kg bag of rock salt person −1 yr −1 when normalized by the 20,000 people living in the watershed. In winter months, higher infiltration routes a large fraction of snowmelt and deicers into shallow subsurface pathways, enhancing vadose-zone and interflow contributions to stream salinity. Limited subsurface storage capacity and seasonal hydrologic turnover flush excess chloride from the vadose zone and groundwater during subsequent summer storms. By linking climate-driven deicer inputs, hydrologic connectivity, and stream water age, the framework provides a transferable basis for diagnosing and managing freshwater salinization in urban watersheds.

Virginia↗
USGS2025

Characterizing sedimentary organic carbon in a hydrothermal spreading center, the Escanaba Trough

Sediments in critical marine mineral environments are of wide importance due to their preservation of both marine minerals and organic carbon (OC) stocks. However, OC storage and cycling is often overlooked in mineral system studies. This work characterizes sedimentary OC within the Escanaba Trough, a hydrothermal sulfide system off the coast of northern California. By utilizing ROV-based push coring, we collected sediments near and far from high temperature, low temperature, and inactive vents. We applied a multipronged organic geochemical approach, measuring bulk sediment, OC fractions of varying labilities, and biomarkers to tease apart the storage, source, and cycling of OC within this complex system. In contrast to past work indicating a primarily terrestrial source to deeper, Pleistocene sediments, our results suggest a primarily marine source in surface sediments at least 50 m away from active venting. Near active venting, we see evidence of locally produced chemosynthetic OC in addition to the background marine source. This chemosynthetic OC appears to be rapidly remineralized and supports more complex deep-sea food webs compared to hemipelagic sites. Still, the greatest contribution of labile OC was observed at inactive vent sites, which we suggest is due to hydrothermal fluid alteration of more labile OC at actively venting sites. Depending on fluid temperature, hydrothermally altered OC is either preserved in the sediments as petroleum or migrated with fluid flow. Considering inactive sites are those most likely to be targeted by potential mining, we suggest additional studies could verify if these results apply at other sedimented seafloor massive sulfide systems.

California↗
USGS2024

Developing international standards and guidelines for disseminating and validating simulated ground motions

We are leading an effort to develop international standards and guidelines for curating, disseminating, and validating simulated ground-motion data. This effort is organized as a working group within the Consortium of Organizations for Strong Motion Observation Systems (COSMOS). In 2022 we held online workshops on 7 and 8 June and 20 October. The first workshop focused on curating and disseminating simulated ground-motion data. The second workshop focused on validating simulated ground-motions for engineering applications. About 100 people participated in each of the workshops with strong representation from North America, Europe, and western Asia. In the coming year, we intend to form a technical committee to draft the international guidelines and standards while continuing to engage stakeholders from across the globe through online and in-person meetings. The key points from the workshops include: (1) Numerous groups are generating simulated earthquake ground motions and making them openly available; however there is very little coordination among groups to provide consistent interfaces for searching and retrieving data; (2) Standardizing interfaces for metadata and data access should consider agile approaches that can adapt to changing capabilities and user needs while building upon existing efforts; (3) A distributed architecture is preferred by most participants to allow institutions to host and manage their own data while broadcasting their holdings to a combined catalog; (4) Validation of ground-motion simulations applies to the entire workflow for simulating earthquake ground-motions, including the rupture model, seismic velocity model, and seismic wave propagation software; (5) Metrics to evaluate the validation are application dependent; more research is needed to tie structural response characteristics to ground-motion characteristics; and (6) Validation results should provide a clear, transparent, and quantitative assessment of the simulated ground motions.

Conference Paper↗
USGS2024

Field observations and logs from the Rose Hip trench exposure across a north-facing scarp within the Seattle Fault Zone, southern Bainbridge Island, Washington

The Seattle Fault Zone is an approximately 70-km-long, east-west-trending zone of south-dipping blind reverse faults within the Puget lowland region in Washington. Because of the proximity, the Seattle Fault Zone poses a significant earthquake hazard to the Puget sound and Seattle metropolitan regions. We present preliminary mapping and trench-site information from a paleoseismic investigation across a newly identified active fault scarp located within the hanging wall of the Seattle Fault Zone on southern Bainbridge Island, Washington. The trench exposed monoclinally folded Miocene bedrock, fractured and faulted glacial-related deposits, and laminated lacustrine deposits capped by slope-derived colluvium. The observations from this investigation record late Pleistocene to Holocene north-vergent folding and faulting along this new fault scarp.

Washington↗
USGS2025

Lunar grid systems, coordinate systems, and map projections for the Artemis missions and lunar surface navigation

Foreward This document contains design specifications of a navigational standard for the Moon, including a Lunar Transverse Mercator system, a Lunar Polar Stereographic system, a Lunar Grid Reference System, and a unique coordinate structure, Artemis Condensed Coordinates, for Artemis mission navigation and lunar surface science. The National Aeronautics and Space Administration (NASA) Artemis campaign seeks to place humans on the Moon for the first time since the Apollo missions. Early Artemis missions are heavily focused on the lunar south pole, which promises to return valuable data on the Moon’s geologic record, amongst other mission objectives. Coordinate systems in use today for the lunar south pole provides crew members on the surface neither an efficient nor intuitive means to communicate their position and orientation. A novel grid coordinate system, the Lunar Grid Reference System, is proposed to address these concerns for use in real-time extravehicular activity operations on the lunar surface. The many stakeholders involved in the Artemis missions will need a common system to communicate position and orientation while astronauts are operating on the lunar surface. To that end, Artemis crew members will need that system to be efficient and intuitive to promote efficient extravehicular activity timelines and reduce confusion. In the context of this document, these characteristics are addressed on the design of lunar coordinate systems: Efficient.—The number of characters required to communicate a location within a desired precision level in both local and global contexts, and how many steps are required for a recipient or sender to interpret a location. Intuitive.—How well the system aligns with human perceptual abilities, and whether the system yields distances that have the same relationship to actual lunar surface distance in all directions from the point where a person is located. Technological systems are currently being investigated to supplement the crew members’ ability to locate and orient themselves and other assets on the lunar surface; however, it is unlikely that those systems will be fully operational for the first few landed missions. Even with future positional aids, crew members will still need an efficient and intuitive means to communicate position and orientation. In addition, if technological systems fail, the crews will require land navigation skills and have maps available, thus providing further motivation for a crew-centric coordinate system. The contents of this U.S. Geological Survey (USGS) document detail a comprehensive framework for standardizing lunar crewed surface navigation within NASA and outlines the protocols, methods, and designs necessary for achieving consistency and interoperability across relevant space mission teams and lunar surface navigators. Key components of this document include designs of map projections, projected coordinate reference systems (Lunar Transverse Mercator and Lunar Polar Stereographic systems), and a grid system (Lunar Grid Reference System and Artemis Condensed Coordinates) for the Moon. The work proposed in this document seeks to accomplish something similar to the National Geospatial-Intelligence Agency (NGA) document SIG 0012 (NGA, 2014a), but for using grid systems for the Moon. This report incorporates initial feedback and input from NASA’s Artemis Geospatial Data Team, NASA’s Flight Operations Directorate, National Geodetic Survey, USGS Astrogeology Science Center, and NGA and is intended to serve as a resource for all involved with the Artemis missions, as well as for engineers designing and operating lunar infrastructure.

Techniques and Methods↗
USGS1999

Reconfigured-Channel Monitoring and Assessment Program

A U.S. Geological Survey program to monitor and assess channel reconfiguration activity is described. A data base available on the world wide web will enable land-management agencies and other interested parties to evaluate the long-term success of various channel reconfiguration projects. A demonstration project on the Lake Fork of the Gunnison River, Colorado, illustrates the program objectives and approach.

Colorado↗
USGS2024

New developments at the Center for Engineering Strong-Motion Data (CESMD)

The Center for Engineering Strong-Motion Data (CESMD), an internationally utilized joint center of the U.S. Geological Survey (USGS) and the California Geological Survey (CGS), provides a single access point for earthquake strong-motion records and station metadata from the CGS California Strong-Motion Instrumentation Program (CSMIP), the USGS National Strong-Motion Project (NSMP), the USGS Advanced National Seismic System, and other affiliates. The CESMD has been continuously improving its webtools to facilitate the access of strong-motion data and metadata for use in post-earthquake response and for scientific and engineering research applications. The Center provides raw and processed strong-motion data via the Engineering Data Center (EDC) and the Virtual Data Center (VDC) web portals. This paper focuses on the strong-motion products provided by the EDC where more than 48,000 records with peak ground accelerations greater than 0.1% g from over 2400 earthquakes are currently hosted. and on the ongoing efforts to develop data access tools and applications. The new developments and ongoing efforts in the EDC include: 1) enhancements to the CESMD webservices to facilitate access to station metadata, earthquake information, and strong motion records 2) new features to the interactive map interface, improving the visualization and access to earthquake, station, and record information, 3) efforts to develop a new web application tool for data format conversion from a number of data formats, 4) efforts to unify varying waveform data formats into a consistent format, 5) ongoing efforts to compile seismic station site geology, measured or inferred Vs30 values, shear-wave profiles, NEHRP site class, and available structural instrument deployment schematics, and 6) a special studies pages for research topic-specific ground motion datasets that offer uniform processing of records from a variety of sources.

Conference Paper↗
USGS2024

The Europa Imaging System (EIS) investigation

The Europa Imaging System (EIS) consists of a Narrow-Angle Camera (NAC) and a Wide-Angle Camera (WAC) that are designed to work together to address high-priority science objectives regarding Europa’s geology, composition, and the nature of its ice shell. EIS accommodates variable geometry and illumination during rapid, low-altitude flybys with both framing and pushbroom imaging capability using rapid-readout, 8-megapixel (4k × 2k) detectors. Color observations are acquired using pushbroom imaging with up to six broadband filters. The data processing units (DPUs) perform digital time delay integration (TDI) to enhance signal-to-noise ratios and use readout strategies to measure and correct spacecraft jitter. The NAC has a 2.3° × 1.2° field of view (FOV) with a 10-μrad instantaneous FOV (IFOV), thus achieving 0.5-m pixel scale over a swath that is 2 km wide and several km long from a range of 50 km. The NAC is mounted on a 2-axis gimbal, ±30° cross- and along-track, that enables independent targeting and near-global (≥90%) mapping of Europa at ≤100-m pixel scale (to date, only ∼15% of Europa has been imaged at ≤900 m/pixel), as well as stereo imaging from as close as 50-km altitude to generate digital terrain models (DTMs) with ≤4-m ground sample distance (GSD) and ≤0.5-m vertical precision. The NAC will also perform observations at long range to search for potential erupting plumes, achieving 10-km pixel scale at a distance of one million kilometers. The WAC has a 48° × 24° FOV with a 218-μrad IFOV, achieving 11-m pixel scale at the center of a 44-km-wide swath from a range of 50 km, and generating DTMs with 32-m GSD and ≤4-m vertical precision. The WAC is designed to acquire three-line pushbroom stereo and color swaths along flyby ground-tracks.

Space Science Reviews↗