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Ecology and diagnosis of introduced avian malaria in Hawaiian forest birds

Avian malaria is a disease caused by species of protozoan parasites (Plasmodium) that infect birds. Related species commonly infect reptiles, birds and mammals in tropical and temperate regions of the world. Transmitted by mosquitoes, the parasites spend part of their lives in the red blood cells of birds (Figure 1). Avian malaria is common in continental areas, but is absent from the most isolated island archipelagos where mosquitoes do not naturally occur. More than 40 different species of avian Plasmodium have been described, but only one, P. relictum, has been introduced to the Hawaiian Islands. Because they evolved without natural exposure to avian malaria, native Hawaiian honeycreepers are extremely susceptible to this disease. Malaria currently limits the geographic distribution of native species, has population level impacts on survivorship, and is limiting the recovery of threatened and endangered species of forest birds.

Fact Sheet↗

Physiological Ecology and Ecohydrology of Coastal Forested Wetlands

The form, function, and productivity of wetland communities are influenced strongly by the hydrologic regime of an area. Wetland ecosystems persist by depending upon surpluses of rainfall, evapotranspiration, soil moisture, and frequency and amplitude of water-level fluctuations. Yet, wetland vegetation can also influence ecosystem water economy through conservative water- and carbon-use strategies at several organizational scales. Scientists have described leaf-level water-use efficiency in coastal mangrove forests as being among the highest of any ecosystem. These forested wetlands occur in intertidal areas and often persist under flooded saline conditions. Are these same strategies used by other types of coastal forested wetlands? Do conservative water-use strategies reflect a consequence of salt balance more than efficiency in water use per se? At what organizational scales do these strategies manifest? These are just a few of the questions being answered by physiological and landscape ecologists at the U.S. Geological Survey National Wetlands Research Center (NWRC).

Fact Sheet↗

Microbial ecology of deep-water mid-Atlantic canyons

The research described in this fact sheet will be conducted from 2012 to 2014 as part of the U.S. Geological Survey's DISCOVRE (DIversity, Systematics, and COnnectivity of Vulnerable Reef Ecosystems) Program. This integrated, multidisciplinary effort will be investigating a variety of topics related to unique and fragile deep-sea ecosystems from the microscopic level to the ecosystem level. One goal is to improve understanding, at the microbiological scale, of the benthic communities (including corals) that reside in and around mid-Atlantic canyon habitats and their associated environments. Specific objectives include identifying and characterizing the microbial associates of deep-sea corals, characterizing the microbial biofilms on hard substrates to better determine their role in engineering the ecosystem, and adding a microbial dimension to benthic community structure and function assessments by characterizing micro-eukaryotes, bacteria, and archaea in deep-sea sediments.

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Integrated monitoring of ecological conditions in wetland-upland landscapes

Landscapes of interwoven wetlands and uplands offer a rich set of ecosystem goods and services. Managing lands to maximize ecosystem services requires information that distinguishes change caused by local actions from broader-scale shifts in climate, land use, and other forms of global change. Satellite and airborne sensors collect valuable data for this purpose, especially when the data are analyzed along with data collected from ground-based sensors. The U.S. Geological Survey (USGS) is using remote sensing technology in this way as part of the Terrestrial Wetland Global Change Research Network to assess effects of climate change interacting with land-use change and other potential stressors along environmental gradients of wetland-upland landscapes in the United States and Canada.

Fact Sheet↗

Ecological health in the Nation's streams

Aquatic biological communities, which are collections of organisms, are a direct measure of stream health because they indicate the ability of a stream to support life. This fact sheet highlights selected findings of a national assessment of stream health by the National Water-Quality Assessment (NAWQA) Program of the U.S. Geological Survey (USGS). The assessment was unique in that it integrated the condition of three biological communities—algae, macroinvertebrates, and fish—as well as measures of streamflow modification, pesticides, nutrients, and other factors. At least one biological community was altered at 83 percent of assessed streams, and the occurrence of altered communities was highest in urban streams. Streamflows were modified at 86 percent of assessed streams, and increasing severity of streamflow modification was associated with increased occurrence of altered biological communities. Agricultural and urban land use in watersheds may contribute pesticides and nutrients to stream waters, and increasing concentrations of these chemicals were associated with increased occurrence of altered biological communities.

Fact Sheet↗

Changing Arctic ecosystems: ecology of loons in a changing Arctic

The U.S. Geological Survey (USGS) Changing Arctic Ecosystems (CAE) initiative informs key resource management decisions for Arctic Alaska by providing scientific information on current and future ecosystem response to a changing climate. From 2010 to 2014, a key study area for the USGS CAE initiative has been the Arctic Coastal Plain of northern Alaska. This region has experienced rapid warming during the past 30 years, leading to the thawing of permafrost and changes to lake and river systems. These changes, and projections of continued change, have raised questions about effects on wildlife populations that rely on northern lake ecosystems, such as loons. Loons rely on freshwater lakes for nesting habitat and the fish and invertebrates inhabiting the lakes for food. Loons live within the National Petroleum Reserve-Alaska (NPR-A) on Alaska’s northern coast, where oil and gas development is expected to increase. Research by the USGS examines how breeding loons use the Arctic lake ecosystem and the capacity of loons to adapt to future landscape change.

Alaska↗

Biological and ecological science for Montana—The Treasure State

Montana is rich in minerals, energy, and soils, as well as prairies, forests, mountains, rivers, lakes, fish, and wildlife. Many enterprises that drive the economy are based on natural resources, including tourism, hunting, fishing, agriculture, and energy development. The outdoor-recreation economy alone supports 64,000 Montana jobs and generates nearly \$6 billion each year in economic activity.

Montana↗

Biological and ecological science for Nevada—The Silver State

Nevada is rich in minerals, energy, rangelands, mountains, deserts, lakes, fish, and wildlife. Many enterprises critical to Nevada's economy are based on natural resources including solar energy, livestock production, hunting, fishing, and other outdoor recreation. Nevada is a national leader in both geothermal and solar utility-scale energy production, and invested more than $ 1.2 million in 2016 in solar development alone. Agriculture, primarily livestock production, generates more than half a billion dollars annually, and wildlife watching, hunting, and fishing contribute more than $1 billion to Nevada's economy annually.

Nevada↗

Biological and ecological science for Wisconsin—A Great Lakes and Rivers State

Wisconsin and natural resources go hand-in-hand. Tourism, which generates $ 19 billion annually and sustains about 200,000 jobs, depends on an abundance of lakes, rivers, shorelines, and woodlands for fishing, hunting, boating, and other outdoor recreation. Rivers and floodplains in the Upper Mississippi Basin, including the Mississippi River, are part of a five-State corridor that generates more than $ 300 billion annually and sustains millions of manufacturing, tourism, transportation, and agricultural jobs. Wisconsin also is a Great Lakes State with more than 800 miles of shoreline, and the fisheries of lakes Superior and Michigan deliver $ 185 million annually and provide thousands of jobs.

Wisconsin↗

Biological and ecological science for Michigan—The Great Lakes State

Michigan is rich in lakes, rivers, dune and rocky shorelines, forests, fish and wildlife, and has the longest freshwater coastline in the United States, 3,224 miles. Many enterprises critical to Michigan’s economy and cultural heritage are based on natural resources including commercial and sport fishing, hunting, and other outdoor recreation. Overall, outdoor recreation is enjoyed by more than 63 percent of Michigan residents, and has been estimated to generate $18.7 billion in consumer spending, create 194,000 jobs, and raise $1.4 billion in State and local tax revenue annually.

Michigan↗

Biological and ecological science for Ohio—The Buckeye State

Ohio is home to lakes, rivers, streams, wetlands, forests, prairies, and 312 miles of Lake Erie shoreline. These resources sustain Ohio’s communities by supporting vital sectors of the economy and cultural heritage such as fishing, hunting, and other outdoor recreation. Lake Erie provides drinking water for 3 million Ohioans, supports 124,000 Ohio jobs, and generates \$1.8 billion in tourism revenue to the State. Outdoor recreation is enjoyed by nearly 60 percent of Ohio residents. Annually, it is estimated that outdoor recreation generates \$24.3 billion in consumer spending across the State, creates 215,000 jobs, and raises \$1.5 billion in State and local tax revenue.

Ohio↗

EverForecast—A near-term forecasting application for ecological decision support

The Everglades Forecasting application (EverForecast) provides decision makers with a support tool to examine optimal allocations of water across the managed landscape while explicitly quantifying the conflicting needs of multiple species. Covering the Greater Everglades (a vast, subtropical wetland ecosystem in South Florida), EverForecast provides 6-month forecasts of daily projected water stage across the region. It then runs these forecasts through a suite of species models and illustrates potential tradeoffs. All output is summarized by subregion and hydrologic category. Decision makers can use these near-term forecasts to manage the transition from current conditions to future alternatives according to their management priorities.

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The Everglades vulnerability analysis—Integrating ecological models and addressing uncertainty

The Everglades vulnerability analysis (EVA) is a project led by the U.S. Geological Survey in cooperation with the National Park Service and U.S. Army Corps of Engineers to accomplish one of the science goals of Restoration Coordination & Verification (RECOVER), a multiagency group responsible for providing scientific and technical evaluations and assessments for improving the ability of the Comprehensive Everglades Restoration Plan to restore, preserve, and protect the south Florida ecosystem while providing for the region’s other water-related needs. In 2016, RECOVER acknowledged the need for a tool that could synthesize the decades of Everglades ecosystem science and identify areas vulnerable to changing conditions on the landscape. The EVA tool answers this need through a landscape-scale modeling framework that provides annual responses and relative vulnerability for a suite of indicators of Everglades ecosystem health.

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Forecasting selenium discharges to the San Francisco Bay-Delta Estuary: Ecological effects of a proposed San Luis drain extension

During the next few years, federal and state agencies may be required to evaluate proposals and discharge permits that could significantly change selenium (Se) inputs to the San Francisco Bay-Delta Estuary (Bay-Delta), particularly in the North Bay (i.e., Suisun Bay and San Pablo Bay). These decisions may include discharge requirements for an extension of the San Luis Drain (SLD) to the estuary to convey subsurface agricultural drainage from the western San Joaquin Valley (SJV), a renewal of an agreement to allow the existing portion of the SLD to convey subsurface agricultural drainage to a tributary of the San Joaquin River (SJR) (coincident with changes in flow patterns of the lower SJR), and refinements to promulgated Se criteria for the protection of aquatic life for the estuary. Understanding the biotransfer of Se is essential to evaluating the fate and impact of proposed changes in Se discharges to the Bay-Delta. However, past monitoring programs have not addressed the specific protocols necessary for an element that bioaccumulates. Confusion about Se threats in the past have stemmed from failure to consider the full complexity of the processes that result in Se toxicity. Past studies show that predators are more at risk from Se contamination than their prey, making it difficult to use traditional methods to predict risk from environmental concentrations alone. In this report, we employ a novel procedure to model the fate of Se under different, potentially realistic load scenarios from the SJV. For each potential load, we progressively forecast the resulting environmental concentrations, speciation, transformation to particulate form, bioaccumulation by invertebrates, trophic transfer to predators, and effects in those predators. Enough is known to establish a first order understanding of effects should Se be discharged directly into the North Bay via a conveyance such as the SLD. Our approach uses 1) existing knowledge concerning the biogeochemical reactions of Se (e.g., speciation, partitioning between dissolved and particulate forms, and bivalve assimilation efficiency) and 2) site-specific data mainly from 1986 to 1996 on clams and bottom-feeding fish and birds. Forecasts of Se loading from oil refineries and agricultural drainage from the SJV enable the calculation of a composite freshwater endmember Se concentration at the head of the estuary and at Carquinez Strait as a foundation for modeling. Our analysis of effects also takes into account the mode of conveyance for agricultural drainage (i.e., the SLD or SJR). The effects of variable flows on a seasonal or monthly basis from the Sacramento River and SJR are also considered. The results of our forecasts for external SJV watershed sources of Se mirror predictions made since 1955 of a worsening salt (and by inference, Se) buildup exacerbated by the arid climate and irrigation for agricultural use. We show that the reservoir of Se in the SJV is sufficient to provide loading at an annual rate of approximately 42,500 pounds (lbs) of Se to a Bay-Delta disposal point for 63 to 304 years at the lower range of our projections, even if influx of Se from the California Coast Ranges could be curtailed. Disposal of wastewaters on an annual basis outside of the SJV may slow the degradation of valley resources, but drainage alone cannot alleviate the salt and Se buildup in the SJV, at least within a century. Our forecasts show the different proportions of Se loading to the Bay-Delta. Oil refinery loads from 1986 to 1992 ranged from 11 to 15 lbs Se per day; with treatment and cleanup, loads decreased to 3 lbs Se per day in 1999. In contrast, SJV agricultural drainage loads could range from of 45 to 117 lbs Se per day across a set of reasonable conditions. Components of this valley-wide load include five source subareas (i.e., Grassland, Westlands, Tulare, Kern, and Northern) based on water and drainage management. Loads vary per subarea mainly because of proximity of the s

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