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Groundwater surveillance of swine pathogens from private wells supplying swine farms in Iowa

Biosecurity practices are essential for maintaining pig health and productivity. Despite these measures, pathogen spread still occurs. Water is one of the largest daily inputs on swine farms by volume and is not routinely tested or disinfected before it is consumed by the animals [1-3], making it a poorly understood biosecurity risk. Groundwater from privately-owned wells is a common water source for swine farms. Pathogens in the landscape, such as bacteria, viruses, and protozoa, can reach groundwater more rapidly through soil macropores, maintaining viability and facilitating transmission of pathogens into aquifers [3-13].

Iowa

Seismic intensities, ground motions and basin amplification from the 2022 Mw 6.4 Ferndale, California intraslab earthquake

On December 20, 2022, a Mw 6.4 earthquake occurred at a depth of 18 km within the subducting Gorda plate in the Mendocino Triple Junction (MTJ), one of the most seismically active regions of the contiguous United States, causing widespread damage to local communities. Here we document the seismic intensities, ground motions, and basin amplification effects recorded by this earthquake across Humboldt County as part of an ongoing scientific effort to understand subduction zone earthquake hazards. Modified Mercalli Intensity (MMI) values from our post-earthquake field survey report shaking intensities as high as VIII (Severe). Strong ground motion data from 54 seismic stations were processed to calculate amplitude and frequency content parameters across Northern California. The maximum calculated geometric mean PGA and PGV are 1053 cm/s 2 and 52 cm/s (respectively), both recorded within the 3 km deep Eel River sedimentary basin. Comparisons with four published Ground Motion Prediction Equations indicate that PGA and PGV measurements align with expected attenuation-distance patterns for intraslab earthquakes of this nature. Within the Eel River Basin, ground motions for frequencies above 1 Hz are amplified, with respect to reference stations, by factors greater than 2. Our findings suggest that peak ground motions were mainly caused by sedimentary basin site-effects within the Eel River basin, although rupture directivity may have also increased ground motion amplitudes locally. While the Ferndale area is primarily impacted by shallow intraslab earthquakes, our results also raise questions about site-response and basin amplification hazards from a potential megathrust earthquake. The high seismicity rates of the southernmost Cascades call for stronger regional preparedness and improved strategies to mitigate the effects of such a large-scale disaster.

California

ShakeAlert® version 3: Expected performance in large earthquakes

The ShakeAlert earthquake early warning (EEW) system partners along with U.S. Geological Survey (USGS) licensed operators deliver EEW alerts to the public and trigger automated systems when a significant earthquake is expected to impact California, Oregon, or Washington. ShakeAlert’s primary goal is to provide usable warning times before the arrival of damaging shaking. EEW is most likely to achieve this goal in large‐magnitude earthquakes. In recent years, ShakeAlert has gone through a series of upgrades to its underlying scientific algorithms aimed at improved performance during large earthquakes. Version 3 of this software recently went live in the production system and includes improvements to all algorithms. The main seismic algorithms that detect an earthquake and characterize its location, magnitude, and fault rupture orientation are faster than older versions. Other key changes include: using real‐time geodetic data to characterize the magnitude growth in large earthquakes; the introduction of an alert pause procedure to compromise between speed near the epicenter and improved accuracy at larger distances; and the inclusion of a nonergodic site‐response model in the ground‐motion predictions. ShakeAlert has achieved its primary goal of usable warning times before strong shaking at some locations in real‐time operations in recent M 6 earthquakes. Using offline tests, we demonstrate usable warning times are possible for many sites with peak shaking values of modified Mercalli intensity (MMI) 7–8 in M 7+ earthquakes and also for many MMI 8–9 sites in M 8+ earthquakes. ShakeAlert partners use a variety of MMI and magnitude thresholds in deciding when to alert their users within bounds set by the USGS. Our study shows that there is room to raise the magnitude thresholds up to about M 5.5 without adversely affecting performance in large earthquakes. The ground‐motion criteria are more complex owing to a significant drop‐off in warning times between the MMI 4 and 5 levels of predicted shaking. However, widely used ShakeAlert products, such as the MMI 3 and 4 contour products, can provide sufficiently long warning times before strong shaking in moderate‐to‐great earthquakes to enable a range of protective actions.

Bulletin of the Seismological Society of America

Critical minerals in mine waste

Introduction Critical minerals are commodities with vulnerable supply chains that play a vital role in supporting the United States’ economy, national defense and security, emerging technologies, and energy independence. The prosperity of our Nation depends on generating a resilient supply of domestic critical minerals; mine waste may be an untapped source of these commodities. Mine waste from centuries of legacy mining persist on the landscape and may contain critical minerals and other valuable commodities previously deemed uneconomic to recover. At modern mines, the financial viability of recovering byproduct critical minerals, which are not the primary target, may be marginal and can ultimately destine them to mine waste. Further, mine waste can be a liability for the mining company or, at legacy mines, the taxpayer because of its effect on the landscape. The U.S. Geological Survey (USGS) has several initiatives to evaluate critical mineral resources in various types of waste. This factsheet highlights studies of mine waste carried out by USGS scientists at the Geology, Energy & Minerals Science Center in collaboration with other science centers funded through the USGS Mineral Resources Program. Recovery of critical minerals from mine waste can aid in remediation efforts and increase domestic supply of vital mineral resources.

Fact Sheet

Development of USGS NSHMs: Do small changes in hazard imply small changes in risk?

One of the flagship products from the U.S. Geological Survey (USGS) is the National Seismic Hazard Model (NSHM). Since 1976, the NSHM has been periodically updated to reflect newly published earthquake science and provide probabilistic estimates of seismic hazard for the United States. During each update cycle, alternative models are deliberated, analyzed, and documented through logic trees and their corresponding logic tree branch weights. For example, the decision to modify a logic tree branch weight may be influenced by sensitivity analyses of the logic tree branches in their effects on the mean hazard. However, do small changes in traditional measures of hazard imply small changes in risk? In this study, we make use of two update cycles of the USGS NSHMs and a National Bridge Inventory (NBI) from the Federal Highway Administration (FHWA) to explore the preceding question. Specifically, we first identify geographic locations in the conterminous United States in which the change in hazard from one cycle to another is relatively small. Next, we model the seismic risk to highway bridges for these locations and for each update cycle, while simultaneously distinguishing low hazard environments from high hazard environments. These data enable quantitative analysis of how much changes in risk can be expected given small changes in hazard, investigating the importance of risk models in decision-making during development of the USGS NSHMs.

Conference Paper

Quantifying groundwater response and uncertainty in beaver-influenced mountainous floodplains using machine learning-based model calibration

Beavers ( Castor canadensis ) alter river corridor hydrology by creating ponds and inundating floodplains, and thereby improving surface water storage. However, the impact of inundation on groundwater, particularly in mountainous alluvial floodplains with permeable gravel/cobble layers overlain by a soil layer, remains uncertain. Numerical modeling across various floodplain structures considers topographic and sediment complexity and multidirectional flow, linking inundation to groundwater response. This study develops a model-data integration workflow to address uncertainty in groundwater response to beaver-induced inundations in a mountainous alluvial floodplain in the Upper Colorado River Basin. Uncertain factors include seasonal hydrologic dynamics, hydraulic conductivities, floodplain structures, and meteorological forcings. We employed an ensemble of groundwater models, based on geophysical and hydrologic data, with machine learning-based calibration using a neural density estimator. This allowed us to quantify the vertical flux from the soil layer to the permeable gravel bed, the down-valley underflow within the gravel bed, and their ratios. Results show a significant increase in the vertical flux relative to down-valley underflow, from 2% during dry pond periods to 20% during wet periods, serving as an analogy for conditions without and with beaver ponds. The study highlights the influence of floodplain structure on groundwater storage, water balance, and water quality impacted by beaver ponds. A thick gravel bed layer, with a large down-valley underflow, minimizes the effect of beaver-induced inundation on water quality. We emphasize the need for field-scale measurements of floodplain structure and improved characterization of evapotranspiration changes to reduce uncertainty in groundwater response.

Colorado

From model to action: Identifying the gaps in coastal marsh models for decision making

Coastal salt marsh modeling projects are designed to answer questions about where salt marshes may migrate, how they can migrate, and how they will be impacted by changing water levels. While this information is vital for climate-resilient marsh conservation, translating these findings into actionable results remains a challenge. The authors examined the actionability of marsh modeling efforts in the United States by analyzing data collected from semi-structured interviews of marsh model users ( n = 24) across two ongoing projects along the U.S. East Coast and the Gulf of America (Gulf of Mexico). By qualitatively analyzing the interview data, the authors found that the tasks of practitioners who use coastal marsh model outputs fall into three major themes: (1) marsh restoration, (2) planning with uncertainty, and (3) conserving habitat for marsh-reliant species. For each of these themes, the authors identify unmet needs, including high spatial resolution information for local planning, accessible descriptions of uncertainty to increase user confidence, and the incorporation of human dimensions data (e.g., human alterations to the landscape such as impoundments and culverts) for a comprehensive understanding of the coastal salt marsh. Marsh modeling projects should strategize how to fulfil these unmet user needs so that marsh modeling outputs can better support decisions related to marsh conservation and restoration.

Gulf of America, United States East Coast

Groundwater budget for the surficial aquifer surrounding Lake Nokomis, Minneapolis, Minnesota

During prolonged periods of above-average precipitation, rising groundwater levels have the potential to cause damage to and interfere with underground infrastructure and building foundations. To understand the relations between precipitation and groundwater in the vicinity of Lake Nokomis, the U.S. Geological Survey, in collaboration with the University of Minnesota, quantified five components of the groundwater budget: groundwater recharge, change in surficial aquifer storage, surficial aquifer groundwater discharge to Lake Nokomis, groundwater evapotranspiration, and groundwater discharge to underlying bedrock aquifers. Field data, geologic records, and empirical calculation methods were used to quantify groundwater budget components for April 2023 through April 2024. Lake water budget data indicate that Lake Nokomis is a flowthrough system during periods with no outflow through the weir, with groundwater inputs equal to outputs. Roughly 40 percent of precipitation that fell in the study area was added to the surficial aquifer as recharge. Uncertainty in the vertical hydraulic conductivity resulted in wide-ranging estimates (spanning three orders of magnitude) of water discharging from the surficial aquifer to the underlying bedrock aquifer. Drought conditions persisted for the duration of this study and were not representative of the conditions that motivated this study. This study is a start towards understanding relations between precipitation, Lake Nokomis levels, and groundwater levels that could affect local underground infrastructure.

Minnesota

SlideDetect: Spatio-temporal landslide detection using a three-dimensional convolutional neural network

Landslides pose a serious and ongoing threat to both human lives and infrastructure worldwide; therefore, it is of interest to predict where and when landslides are likely to occur. Advances in machine learning techniques have spurred numerous studies aimed at estimating relative landslide propensity, but are limited to spatial (as opposed to temporal) prediction due to the sparsity of landslide timing data. We address this data gap by training SlideDetect, a 3-dimensional convolutional neural network (3D CNN), to identify landslides based on their spatial and temporal occurrence within multitemporal image stacks. We use an inventory of landsides triggered by the 2018 Hokkaido earthquake and two years of monthly composite optical imagery spanning this event. The model can identify not only landslide location but also landslide date with an area under the precision-recall curve (PR-AUC) of 0.84. We further present a new standard for presenting PR curve results that explicitly compares model performance at different confidence thresholds, allowing for clearer model evaluation and comparison. Our new approach to constraining landslide timing paired with this more consistent and objective method for evaluating model performance shows considerable promise, and with further application and testing, SlideDetect could enhance the data availability and tools needed to advance landslide hazard and risk assessments.

JGR Machine Learning and Computation

Predicted exposure of communities in southeastern United States to climate-related coastal hazards

A rigorous analysis of 21st Century multi-hazard exposure for U.S. Southeast Atlantic coastal communities indicates that up to 70% of residents will be exposed daily to shallow and emerging groundwater by ~2100, 15 times higher than from surficial flooding alone. This threat further exacerbates other coastal stressors, such as flooding, subsidence, and beach erosion, that impact these vulnerable coastal communities and ecosystems under expected future climate change scenarios.

Florida, Georgia, North Carolina, South Carolina,

Controls on natural hydrogen generation during serpentinization of mantle rocks

Mantle rocks undergoing serpentinization can generate significant amounts of natural hydrogen, yet the rates and controlling processes remain poorly understood. Here, we constrain the possible hydrogen generation rates in two distinct mantle rock types, the fertile lherzolites of the Western Pyrenees and the depleted harzburgites of Northern California, to relatively low rates of ~0.1 to ~0.5 tonnes H₂ yr⁻¹ km⁻³ of reactive rock. When integrated over the full reactive volumes, this corresponds to total production rates of ~300 to ~600 tonnes H₂ yr⁻¹. By combining three-dimensional geophysical inversion with numerical modelling of fluid-rock processes, we show that hydrogen generation rates are mainly limited by H₂ saturation in the fluid and reaction kinetics. Under these constraints, hydrogen generation in mantle-derived serpentinization systems proceeds slowly, making rapid large-scale replenishment unlikely and suggesting that large, economically relevant accumulations, would require timescales of thousands to tens of thousands of years to develop.

northern California, western Pyrenees

The new self-anchored suspension (SAS) San Francisco Bay Bridge- Its response to a small earthquake

This paper presents a summary of previously published work (Celebi 2023) related to the new Self-Anchored Suspension (SAS) bridge that went into service within the last decade as a replacement for the older truss bridge spanning between Yerba Buena Island and Oakland, California, within the San Francisco Bay Area. During the October 19, 1989 M6.9 Loma Prieta earthquake, which occurred ~100 km south of the Bay Bridge, a section of the upper deck of the truss bridge fell onto the lower deck – thus closing this important lifeline between San Francisco and Oakland. The SAS is unique, self-anchored, and suspended by a single tower that is pivotal in trafficking the cable and hanger system to support the decks. The SAS bridge is extensively instrumented by the California Geological Survey’s Strong Motion Instrumentation Program (CSMIP). There are approximately 85 channels of accelerometers in the seismic monitoring system that recorded the October 14, 2019 Mw4.6 Pleasant Hill earthquake. The data allow a complex but identifiable coupled response of the deck, tower, and cable system. Both acceleration and displacement time-history data are used to extract significant frequencies using system identification methods, including spectral analyses. Results are compared to those from finite-element-model (FEM) analyses carried out during the design and analysis process of the bridge in 2002 (Nader et al. 2002). There are differences between FEM analyses results and those from the low amplitude shaking caused by a seismic event. An apparent frequency (period) of the SAS bridge is assessed (approximately 5.2 seconds). In a plot of deck length versus period, there is an almost linear relationship with periods of other regular suspension bridges, such as the Golden Gate Bridge and the Carquinez Bridge, both in the San Francisco Bay.

California

Site response in the Walnut Creek–Concord region of the San Francisco Bay, California: Ground motion amplification in a fault-bounded basin

Thirty‐seven portable accelerometers were deployed in the eastern San Francisco Bay communities of Walnut Creek and Concord to study site response in a fault‐bounded, urban, sedimentary basin. Local earthquakes were recorded for a period of two years from 2017 to 2019 resulting in 101 well‐recorded events. Site response is estimated by two methods: the reference site spectral ratio method and a source‐site spectral inversion method. The reference site spectral ratio method allows investigation of the variability of site amplification with source azimuth and frequency. The source‐site spectral inversion method yields the best least‐squares fit to site response for a database of ground‐motion records. Both methods show substantial amplification in the Walnut Creek–Concord basin below 2 Hz indicating strong surface‐wave development. Greater amplification is seen for sources aligned along the long axis of the basin. Inversion using close‐in sources at short distances yields lower amplification at longer periods than the entire data set due to reduced surface‐wave generation for steeper angles of incidence. Inversion of site response spectra for shallow shear‐wave velocity using a global search algorithm yields V S30 values consistent with generalized mapping results based on geology and topography but with greater variability due to local site variations. 3D finite‐element modeling shows greater amplification in the Walnut Creek–Concord basin with a basin‐edge effect likely contributing to higher ground motions. Topography is also seen to lead to increased scattering and shadowing effects.

California

Season and antecedent conditions impact concentration-discharge relationships for dissolved organic carbon and alkalinity in southeast Alaskan watershed

Fluvial export of dissolved carbon plays an important role in watershed-scale biogeochemistry. Predicted changes in climate are expected to impact watershed hydrologic regimes, and in turn, the sources and export of dissolved carbon from watersheds. Here, we utilize high resolution measurements of discharge and dissolved carbon concentration to examine how concentration-discharge (CQ) relationships vary seasonally and during high flow events over the main runoff season (May–October) in a temperate forested watershed in Southeast Alaska. Concentration-discharge relationships for dissolved organic carbon (DOC) and alkalinity demonstrated strong seasonal patterns, with more linear relationships in May and June versus other months. Changing power law model slopes ( b values; the exponent in a power law regression between runoff and carbon yields) indicated potentially shifting watershed sources (biogenic vs. geologic) and contrasting dominant flowpaths (shallow vs. deeper groundwater) for DOC and alkalinity over the sampling period. During the largest storm event of the study, DOC and alkalinity b values shifted from an overall pattern of transport (mean b = 1.58 values >1.0 indicate transport limitation) and source limitation (mean b = 0.48, values <1.0 indicate source limitation) to chemostatic (DOC, b = 0.99; alkalinity, b = 1.019). In June through August, patterns in hysteresis index suggest that CQ relationships were altered when storms followed in close succession to each other. Together, these findings indicate that seasonal and antecedent flow conditions play a role in dissolved carbon export from forested watersheds. Understanding these dynamics, particularly during winter months, will become increasingly important as changes to hydroclimate impact riverine carbon export.

Alaska

Long‐period ground motions from dynamic rupture simulations of large earthquakes on the creeping Hayward–Calaveras–Rodgers Creek fault system

he Hayward, Calaveras, and Rodgers Creek faults in the San Francisco Bay region of California have a high probability of producing a large earthquake in the next decades. Although these faults creep, the creep is insufficient to keep up with their relatively rapid slip rates on their deepest sections, so they have been storing tectonic strain since their last large earthquakes, with the Hayward’s and Rodgers Creek’s more than 150 yr ago. We do not know what the next large Hayward–Calaveras–Rodgers Creek earthquakes will look like or how strongly they will shake the San Francisco Bay region. Harris et al. (2021) used the 3D dynamic (spontaneous) rupture method to simulate large earthquakes on these creeping faults. In this article, we examine the resulting simulated long‐period ( T > 1 s) ground shaking from 0 to 50 km distance, for earthquakes nucleating on the Hayward fault and earthquakes nucleating on the Rodgers Creek fault. We compare these simulated long‐period ground motions with the Boore et al. (2014) well‐established empirically based ground‐motion model suitable for the slowest material velocity in our 3D velocity structure. We find that the simulated long‐period ground motions from the creeping‐fault earthquake scenarios produce a reasonable agreement with the empirical expectations if frictional cohesion is included only where it is appropriate.

California

Assessing natural recharge in Indian Wells Valley, California: A Basin Characterization Model case study

The communities in Indian Wells Valley (IWV), in the northern Mojave Desert in California, rely on groundwater for domestic and agricultural use. Mountain front recharge from the surrounding Sierra Nevada is the main source of natural recharge to the valley. Increased urbanization, agricultural development, and groundwater pumping during recent decades put IWV in a state of critical overdraft. The U.S. Geological Survey Basin Characterization Model, version 8 (BCMv8) was used to evaluate historical and future climate and hydrologic conditions in IWV. The BCMv8 estimated natural recharge in IWV at 10.7 million cubic meters (Mm 3 ) per year for the period from 1981 to 2010. Future patterns of water balance variables using three future climate scenarios, hot-wet, hot-dry, and warm-moderately wet, were calculated for mid-century (2040–69) and end-of-century (2070–99) periods. Results for both wet models projected an increase in recharge in both periods, whereas the hot-dry model projected a decrease in recharge in both periods. All models reported a large increase in seasonal variability in recharge, indicating more future availability and frequent occurrences of drought years. All climate scenarios projected an increase in climatic water deficit in both periods. These increases in irrigation demand and variability of water supply highlight the importance of strategic management planning for the sustainability of water resources in IWV.

California

Airborne geophysical analysis to decipher salinization for coastal Louisiana

Coastal Louisiana is known for saltwater intrusion that threatens wetlands, aquifers, and rivers. However, the extent of saltwater intrusion is not well understood. This study develops an innovative framework with airborne electromagnetic (AEM) data to map chloride concentration distributions for wetlands in the Mississippi River deltaic plain and Chenier plain as well as for the Mississippi River Valley alluvial aquifer (MRVA) and Chicot aquifer. Moreover, the framework maps chloride concentrations along the Mississippi River and Atchafalaya River. Key components in the framework include the establishment of resistivity-to-chloride concentration transformation, 3D resistivity architecture building through geostatistics, and the employment of a lithologic model. The transformation functions correlate AEM resistivity data with porewater salinity measurements and groundwater and river chloride samples. The results show that AEM data reliably infers soil water chloride concentrations and correlates well with the distribution of various marsh types. AEM data reveals extensive saltwater presence at depth and near the coast, originating from salt domes and the Gulf of Mexico, respectively. The saltwater upconing pattern in the Chicot aquifer is likely due to excessive groundwater withdrawals. The AEM data also confirms a distinct tongue of saltwater intruding into the Atchafalaya Basin from the Gulf. The AEM data helps to identify faults that are obscured or eroded at the surface, which appear as leaky barriers in the subsurface where dramatic changes in chloride concentration are apparent. Finally, this study uses the AEM data to infer the presence of an extensive seawater wedge in the Mississippi River and Atchafalaya River.

Louisiana

The National Map Corps—Federal Emergency Management Agency and Oak Ridge National Laboratory pilot project report

This report provides an overview of the U.S. Geological Survey National Map Corps —Federal Emergency Management Agency and Oak Ridge National Laboratory pilot project in St. James Parish, Louisiana, that began in February 2024 and ended at the end of March 2024. The project used the power of The National Map Corps’ volunteer community to improve building classifications in the original Federal Emergency Management Agency’s U.S.A. Structures dataset. The report highlights the project’s completion and details the work and results achieved through a collaborative effort to enhance geospatial data quality and utility.

Open-File Report