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At least 1,441 records · Page 80Linked to original sources

USGS2012

Developing a broader scientific foundation for river restoration: Columbia River food webs

Well-functioning food webs are fundamental for sustaining rivers as ecosystems and maintaining associated aquatic and terrestrial communities. The current emphasis on restoring habitat structure—without explicitly considering food webs—has been less successful than hoped in terms of enhancing the status of targeted species and often overlooks important constraints on ecologically effective restoration. We identify three priority food web-related issues that potentially impede successful river restoration: uncertainty about habitat carrying capacity, proliferation of chemicals and contaminants, and emergence of hybrid food webs containing a mixture of native and invasive species. Additionally, there is the need to place these food web considerations in a broad temporal and spatial framework by understanding the consequences of altered nutrient, organic matter (energy), water, and thermal sources and flows, reconnecting critical habitats and their food webs, and restoring for changing environments. As an illustration, we discuss how the Columbia River Basin, site of one of the largest aquatic/riparian restoration programs in the United States, would benefit from implementing a food web perspective. A food web perspective for the Columbia River would complement ongoing approaches and enhance the ability to meet the vision and legal obligations of the US Endangered Species Act, the Northwest Power Act (Fish and Wildlife Program), and federal treaties with Northwest Indian Tribes while meeting fundamental needs for improved river management.

Proceedings of the National Academy of Sciences of↗

USGS2024

Enhanced microplastic fragmentation along human built structures in an urban waterway

Plastic pollution and microplastic (MP, 1 µm to 5 mm) generation are growing problems affecting the global community and a wide range of natural and disturbed environments. Urban and suburban waterways are directly impacted by plastic pollution due to their proximity to population centers and many different types single use plastic waste sources. In this study, plastic waste accumulation and fragmentation was investigated along the Cooper River in Camden County, NJ. Polymer composition was identified for individual plastic waste particles collected along the Cooper River using Fourier transform infrared (FTIR) spectrometry. Multiple human-built structures (Wallworth Lake, Evans Pond and Hopkins Pond dams) along the Cooper River were found to accumulate different types of plastic waste. The accumulation of plastic waste along these structures resulted in the initial stages of plastic fragmentation and the identification of large MP particles (1 to 5 mm). Quantitative analysis revealed that fragmented polystyrene (PS) particles constituted 82.8% of the total plastic fragments identified, most of which were identified at the Wallworth Lake dam. Many other types of fragmented plastic litter, including polyethylene and polypropylene, were identified at the Wallworth Lake dam, as well. This research demonstrates that engineered structures within urban and suburban aquatic ecosystems serve as significant aggregators of plastic debris, thereby catalyzing its breakdown into microplastics. Considering the escalating ecological and human health ramifications of microplastic proliferation, the fragmentation of plastic waste in an urban and suburban waterway observed in this study can also result in potentially toxic smaller MP particles, and increased exposure to aquatic organisms and humans.

New Jersey↗

USGS2001

Species and population variation to salinity stress in Panicum hemitomon, Spartina patens, and Spartina alterniflora: Morphological and physiological constraints

Panicum hemitomon, Spartina patens, and Spartina alterniflora are wide-spread dominant grasses of fresh, brackish, and salt marsh plant communities, respectively. Our previous research identified significant intraspecific variation in salt tolerance and morphology among populations within each species. In this study our objectives were to determine shorter-term physiological/biochemical responses to salinity stress and identify potential indicators of salt tolerance, with the ultimate goal of discerning similarities and differences in the mechanisms of salinity stress resistance. We subjected a subset of six populations within each species, ranging from high to low salt tolerance, to sublethal salinity levels (4, 20, and 30 ppt, respectively, for species) and monitored physiological and growth responses after 1 week (early harvest) and 5 weeks (late harvest). In all three species sublethal salinity levels generally resulted in significantly reduced net CO2 assimilation, leaf expansion, midday leaf xylem pressure, water use efficiency, and live and total biomass; and significantly increased leaf Na+/K+ ratio, leaf proline, leaf glycine betaine, leaf sucrose, root-to-shoot ratio, and dead:total aboveground biomass ratio. All three species displayed significant population (intraspecific) variation in net CO2 assimilation, leaf expansion, water use efficiency, midday leaf xylem pressure, leaf proline, leaf glycine betaine (except Panicum, where it could not be accurately determined), leaf Na+/K+ ratio, leaf sucrose, total plant biomass, dead:total aboveground biomass ratio, and root-to-shoot ratio. General indicators of salt tolerance (regardless of species) included high net CO2 assimilation rates and water use efficiencies, and low ratios of root-to-shoot and dead:total aboveground biomass. Factor analysis and a-priori linear contrasts revealed some unique differences between species in terms of the relative importance of morphology and physiology in explaining intraspecific variation in salt tolerance. Plant morphology (size attributes) were strongly associated with salt tolerance in P. hemitomon, weakly associated with salt tolerance in S. patens, and not associated with salt tolerance in S. alterniflora. Highly salt-tolerant populations of Spartina alterniflora displayed the greatest ion selectivity (lower leaf Na+/K+ ratios), which was not displayed by the other two species. These results suggest that plant size attributes can be very important in explaining population differences in salt tolerance in glycophytes, but may be independent of salt tolerance in halophytes, which have specialized physiological (and/or anatomical) adaptations that can confer salinity stress resistance through mechanisms such as selective ion exclusion and secretion. ?? 2001 Elsevier Science B.V. All rights reserved.

Conference Paper↗

USGS2009

Mercury cycling in stream ecosystems. 2. Benthic methylmercury production and bed sediment - Pore water partitioning

Mercury speciation, controls on methylmercury (MeHg) production, and bed sediment−pore water partitioning of total Hg (THg) and MeHg were examined in bed sediment from eight geochemically diverse streams where atmospheric deposition was the predominant Hg input. Across all streams, sediment THg concentrations were best described as a combined function of sediment percent fines (%fines; particles < 63 μm) and organic content. MeHg concentrations were best described as a combined function of organic content and the activity of the Hg(II)-methylating microbial community and were comparable to MeHg concentrations in streams with Hg inputs from industrial and mining sources. Whole sediment tin-reducible inorganic reactive Hg (Hg(II) R ) was used as a proxy measure for the Hg(II) pool available for microbial methylation. In conjunction with radiotracer-derived rate constants of 203 Hg(II) methylation, Hg(II) R was used to calculate MeHg production potential rates and to explain the spatial variability in MeHg concentration. The %Hg(II) R (of THg) was low (2.1 ± 5.7%) and was inversely related to both microbial sulfate reduction rates and sediment total reduced sulfur concentration. While sediment THg concentrations were higher in urban streams, %MeHg and %Hg(II) R were higher in nonurban streams. Sediment pore water distribution coefficients (log K d ’s) for both THg and MeHg were inversely related to the log-transformed ratio of pore water dissolved organic carbon (DOC) to bed sediment %fines. The stream with the highest drainage basin wetland density also had the highest pore water DOC concentration and the lowest log K d ’s for both THg and MeHg. No significant relationship existed between overlying water MeHg concentrations and those in bed sediment or pore water, suggesting upstream sources of MeHg production may be more important than local streambed production as a driver of water column MeHg concentration in drainage basins that receive Hg inputs primarily from atmospheric sources.

Environmental Science & Technology↗

USGS2022

Wildfire effects on mass and thermal tolerance of Hydropsyche oslari (Trichoptera) in southwestern USA montane grassland streams

Large-scale disturbances, such as wildfire, can markedly affect streams for years. As terrestrial areas within a watershed slowly recover, stream environments and biota can experience repeated and long-lasting challenges. In 2011, the Las Conchas wildfire burned 1 / 3 of the Valles Caldera National Preserve in northern New Mexico, USA. Seven y post-fire, streams located near the burn perimeter continue to experience varying levels of alteration (e.g., channel alteration with large diel temperature swings), whereas the terrestrial uplands have begun to recover. Extreme temperatures in stream systems may affect the aquatic community, including ectotherms such as caddisflies. These post-fire temperature ranges may increase an ectotherm’s breadth of thermal adaptation, but at metabolic costs that diminish organismal performance, such as growth, development, and fecundity. In this study we characterized in-situ effects of varied thermal regimes across preserve streams on the performance of the caddisfly Hydropsyche oslari Banks, 1905. We measured mass and critical thermal maximum (CT max ) in H. oslari larvae from preserve streams affected by wildfire (high temperature range) and in streams minimally affected by wildfire (low temperature range). We predicted that increased daily temperature maxima and reduced daily temperature minima (i.e., large diel temperature swings) would be associated with reduced H. oslari mass because of the limiting effects of suboptimal temperatures on growth. As predicted, in the weeks prior to their emergence as terrestrial adults, 5 th -instar larvae within the high-temperature range stream had reduced mass (mean 3.3 ± SE 0.55 mg) relative to larvae from the low-temperature range stream (6.2 ± 0.69 mg). We also predicted that CT max of H. oslari would reflect stream thermal history. Indeed, larvae H. oslari from the high-temperature range stream exhibited increased CT max (35.4 ± 0.17°C) compared with larvae from the low-temperature range stream (34.4 ± 0.28°C). We demonstrated that the effects of wildfire on caddisflies can be long lasting, as evidenced by the reduced size at maturity and higher thermal tolerance in a caddisfly population 7 y post-fire.

Freshwater Science↗

USGS2022

Relative bias in catch among long-term fish monitoring surveys within the San Francisco Estuary

Fish monitoring gears rarely capture all available fish, an inherent bias in monitoring programs referred to as catchability. Catchability is a source of bias that can be affected by numerous aspects of gear deployment (e.g., deployment speed, mesh size, and avoidance behavior). Thus, care must be taken when multiple surveys—especially those using different sampling methods—are combined to answer spatio-temporal questions about population and community dynamics. We assessed relative catchability differences among four long-term fish monitoring surveys from the San Francisco Estuary: the Bay Study Otter Trawl (BSOT), the Bay Study Midwater Trawl (BSMT), the Fall Midwater Trawl (FMWT), and the Suisun Marsh Otter Trawl (SMOT). We used generalized additive models with a spatio-temporal smoother and survey as a fixed effect to predict gear-specific estimates of catch for 45 different fish species within large and small size classes. We used estimates of the fixed effect coefficients for each survey (e.g., BSOT) relative to the reference gear (FMWT) to develop relative measures of catchability among taxa, surveys, and fish-size classes, termed the catch-ratio. We found higher relative catchability of 27%, 22%, and 57% of fish species in large size classes from the FMWT than in the BSMT, BSOT, or SMOT, respectively. In the small size class, relative catchability was higher in the FMWT than the BSMT, BSOT, or SMOT for 50%, 18%, and 25% of fish species, respectively. As expected, relative catchability of demersal species was higher in the otter trawls (BSOT, SMOT) while relative catchability of pelagic species was higher in the midwater trawls (FMWT, BSMT). Our results demonstrate that catchability is a source of bias among monitoring efforts within the San Francisco Estuary, and assuming equal catchability among surveys, species, and size classes could result in significant bias when describing spatio-temporal patterns in catch if ignored.

California↗

USGS2023

Capturing patterns of evolutionary relatedness with reflectance spectra to model and monitor biodiversity

Biogeographic history can set initial conditions for vegetation community assemblages that determine their climate responses at broad extents that land surface models attempt to forecast. Numerous studies have indicated that evolutionarily conserved biochemical, structural, and other functional attributes of plant species are captured in visible-to-short wavelength infrared, 400 to 2,500 nm, reflectance properties of vegetation. Here, we present a remotely sensed phylogenetic clustering and an evolutionary framework to accommodate spectra, distributions, and traits. Spectral properties evolutionarily conserved in plants provide the opportunity to spatially aggregate species into lineages (interpreted as “lineage functional types” or LFT) with improved classification accuracy. In this study, we use Airborne Visible/Infrared Imaging Spectrometer data from the 2013 Hyperspectral Infrared Imager campaign over the southern Sierra Nevada, California flight box, to investigate the potential for incorporating evolutionary thinking into landcover classification. We link the airborne hyperspectral data with vegetation plot data from 1372 surveys and a phylogeny representing 1,572 species. Despite temporal and spatial differences in our training data, we classified plant lineages with moderate reliability (Kappa = 0.76) and overall classification accuracy of 80.9%. We present an assessment of classification error and detail study limitations to facilitate future LFT development. This work demonstrates that lineage-based methods may be a promising way to leverage the new-generation high-resolution and high return-interval hyperspectral data planned for the forthcoming satellite missions with sparsely sampled existing ground-based ecological data.

Proceedings of the Natural Academy of Sciences↗

USGS2018

Department of the Interior metadata implementation guide—Framework for developing the metadata component for data resource management

The Department of the Interior (DOI) is a Federal agency with over 90,000 employees across 10 bureaus and 8 agency offices. Its primary mission is to protect and manage the Nation’s natural resources and cultural heritage; provide scientific and other information about those resources; and honor its trust responsibilities or special commitments to American Indians, Alaska Natives, and affiliated island communities. Data and information are critical in day-to-day operational decision making and scientific research. DOI is committed to creating, documenting, managing, and sharing high-quality data and metadata in and across its various programs that support its mission. Documenting data through metadata is essential in realizing the value of data as an enterprise asset. The completeness, consistency, and timeliness of metadata affect users’ ability to search for and discover the most relevant data for the intended purpose; and facilitates the interoperability and usability of these data among DOI bureaus and offices. Fully documented metadata describe data usability, quality, accuracy, provenance, and meaning. Across DOI, there are different maturity levels and phases of information and metadata management implementations. The Department has organized a committee consisting of bureau-level points-of-contacts to collaborate on the development of more consistent, standardized, and more effective metadata management practices and guidance to support this shared mission and the information needs of the Department. DOI’s metadata implementation plans establish key roles and responsibilities associated with metadata management processes, procedures, and a series of actions defined in three major metadata implementation phases including: (1) Getting started—Planning Phase, (2) Implementing and Maintaining Operational Metadata Management Phase, and (3) the Next Steps towards Improving Metadata Management Phase. DOI’s phased approach for metadata management addresses some of the major data and metadata management challenges that exist across the diverse missions of the bureaus and offices. All employees who create, modify, or use data are involved with data and metadata management. Identifying, establishing, and formalizing the roles and responsibilities associated with metadata management are key to institutionalizing a framework of best practices, methodologies, processes, and common approaches throughout all levels of the organization; these are the foundation for effective data resource management. For executives and managers, metadata management strengthens their overarching views of data assets, holdings, and data interoperability; and clarifies how metadata management can help accelerate the compliance of multiple policy mandates. For employees, data stewards, and data professionals, formalized metadata management will help with the consistency of definitions, and approaches addressing data discoverability, data quality, and data lineage. In addition to data professionals and others associated with information technology; data stewards and program subject matter experts take on important metadata management roles and responsibilities as data flow through their respective business and science-related workflows. The responsibilities of establishing, practicing, and governing the actions associated with their specific metadata management roles are critical to successful metadata implementation.

Techniques and Methods↗

USGS2019

Effects of urban multi-stressors on three stream biotic assemblages

During 2014, the U.S. Geological Survey (USGS) National Water-Quality Assessment(NAWQA) project assessed stream quality in 75 streams across an urban disturbance gradient within the Piedmont ecoregion of southeastern United States. Our objectives were to identify primary instream stressors affecting algal, macroinvertebrate and fish assemblages in wadeable streams. Biotic communities were surveyed once at each site, and various instream stressors were measured during a 4-week index period preceding the ecological sampling. The measured stressors included nutrients; contaminants in water, passive samplers, and sediment; instream habitat; and flow variability. All nine boosted regression tree models – three for each of algae, invertebrates, and fish – had cross-validation R 2 (CV R 2 ) values of 0.41 or above, and an invertebrate model had the highest CV R 2 of 0.65. At least one contaminant metric was important in every model, and minimum daytime dissolved oxygen (DO), nutrients, and flow alteration were important explanatory variables in many of the models. Physical habitat metrics such as sediment substrate were only moderately important. Flow alteration metrics were useful factors in eight of the nine models. Total phosphorus, acetanilide herbicides and flow (time since last peak) were important in all three algal models, whereas insecticide metrics (especially those representing fipronil and imidacloprid) were dominant in the invertebrate models. DO values below approximately 7 mg/L corresponded to a strong decrease in sensitive taxa or an increase in tolerant taxa. DO also showed strong interactions with other variables, particularly contaminants and sediment, where the combined effect of low DO and elevated contaminants increased the impact on the biota more than each variable individually. Contaminants and flow alteration were strongly correlated to urbanization, indicating the importance of urbanization to ecological stream condition in the region.

Science of the Total Environment↗

USGS2017

Tambora and the mackerel year: Phenology and fisheries during an extreme climate event

Global warming has increased the frequency of extreme climate events, yet responses of biological and human communities are poorly understood, particularly for aquatic ecosystems and fisheries. Retrospective analysis of known outcomes may provide insights into the nature of adaptations and trajectory of subsequent conditions. We consider the 1815 eruption of the Indonesian volcano Tambora and its impact on Gulf of Maine (GoM) coastal and riparian fisheries in 1816. Applying complex adaptive systems theory with historical methods, we analyzed fish export data and contemporary climate records to disclose human and piscine responses to Tambora’s extreme weather at different spatial and temporal scales while also considering sociopolitical influences. Results identified a tipping point in GoM fisheries induced by concatenating social and biological responses to extreme weather. Abnormal daily temperatures selectively affected targeted fish species—alewives, shad, herring, and mackerel—according to their migration and spawning phenologies and temperature tolerances. First to arrive, alewives suffered the worst. Crop failure and incipient famine intensified fishing pressure, especially in heavily settled regions where dams already compromised watersheds. Insufficient alewife runs led fishers to target mackerel, the next species appearing in abundance along the coast; thus, 1816 became the “mackerel year.” Critically, the shift from riparian to marine fisheries persisted and expanded after temperatures moderated and alewives recovered. We conclude that contingent human adaptations to extraordinary weather permanently altered this complex system. Understanding how adaptive responses to extreme events can trigger unintended consequences may advance long-term planning for resilience in an uncertain future.

Maine, Massachusetts↗

USGS2020

Hurricane sedimentation in a subtropical salt marsh-mangrove community is unaffected by vegetation type

Hurricanes periodically deliver sediment to coastal wetlands, such as those in the Mississippi River Delta Complex (MRDC), slowing elevation loss and improving resilience to sea-level rise. However, the amount of hurricane sediment deposited and retained in a wetland may vary depending on the dominant vegetation. In the subtropical climate of the MRDC, the black mangrove (Avicennia germinans) has been expanding and replacing salt marsh (Spartina alterniflora). Because these vegetation types differ in structure, their influence on sedimentation may also differ. We conducted a survey along 160 km of coastline to determine if the spatial deposition pattern in saline wetlands by Hurricanes Gustav and Ike in September 2008 was differentially influenced by vegetation type. Sampling was initiated two months after landfall at eighteen sites in the MRDC containing side-by-side stands of A. germinans and S. alterniflora along the shoreline, with S. alterniflora marsh landward. Average thickness of hurricane sediment across sites varied from 0.6 to 5.6 cm with an overall mean of 2.6 ± 0.4 cm. Within sites, hurricane-layer thickness varied from 1.3 cm at the shoreline to 4.8 cm in the marsh interior, but this pattern was unaffected by vegetation type. Despite greater canopy height, stem density (including pneumatophores), and leaf area, mangroves did not capture more hurricane sediment than salt marsh nor did they attenuate the delivery of sediment to the marsh interior. Data recorded at thirty-six monitoring stations in Louisiana's Coastwide Reference Monitoring System further showed that rates of accretion, as well as elevation change, in saline wetlands (S. alterniflora) of the MRDC were temporarily increased by Hurricanes Gustav and Ike. These findings agree with previous work showing the beneficial effects of hurricane sediments on coastal wetlands, but suggest that a climate-driven shift from S. alterniflora to A. germinans in the MRDC will not necessarily alter hurricane sediment capture.

Louisiana↗

USGS2024

qPCR-based phytoplankton abundance and chlorophyll a: A multi-year study in twelve large freshwater rivers across the United States

Phytoplankton overgrowth, which characterizes the eutrophication or trophic status of surface water bodies, threatens ecosystems and public health. Quantitative polymerase chain reaction (qPCR) is promising for assessing the abundance and community composition of phytoplankton. However, applications of qPCR to indicate eutrophication and trophic status, especially in lotic systems, have yet to be comprehensively evaluated. For the first time, this study correlates qPCR-based phytoplankton abundance with chlorophyll a (the most widely used indicator of eutrophication and trophic status) in multiple freshwater rivers. From early summer to late fall in 2017, 2018, and 2019, we evaluated phytoplankton, chlorophyll a , pheophytin a , and the Trophic Level Index (TLI) in twelve large freshwater rivers in three regions (western, midcontinent, and eastern) in the United States. Chlorophyll a concentration had positive allometric correlations with qPCR-based phytoplankton abundance (adjusted R 2 = 0.5437, p -value < 0.001), pheophytin a concentration (adjusted R 2 = 0.3378, p -value <0.001), and TLI (adjusted R 2 = 0.4789, p -value < 0.001). Thus, a greater phytoplankton abundance suggests a higher trophic status. This work also presents the numerical values of qPCR-based phytoplankton abundance defining the boundaries among trophic statuses (e.g., oligotrophic, mesotrophic, and eutrophic) of freshwater rivers. The sampling sites in the midcontinent rivers were more eutrophic because they had significantly higher chlorophyll a concentrations, pheophytin a concentrations, and TLI values than the sites in the western and eastern rivers. The higher phytoplankton abundance at the midcontinent sites confirmed their higher trophic status. By linking qPCR-based phytoplankton abundance to chlorophyll a , this study demonstrates that qPCR is a promising avenue to investigate the population dynamics of phytoplankton and the trophic status (or eutrophication) of freshwater rivers.

Continental united States↗

USGS2025

Daily fluctuating flows affect riparian plant species distributions from local to regional scales

Aims The number of hydropower dams has grown globally over recent decades, with significant impacts on downstream riparian plant communities. Many of these dams generate daily fluctuating flows known as hydropeaking to meet sub-daily variation in energy demands. Hydropeaking can significantly impact riparian plant communities, with obligate riparian species tending to experience the greatest negative effects on habitat suitability. Whether this pattern holds in arid biomes where daily soil moisture enhancements could benefit some plants is an open question. Location Colorado River, Grand Canyon, Western USA. Methods We used occurrence records to model species responses to variation in daily flow fluctuations across 32 689 river segments in the Western United States. We then applied estimates of hydropeaking responses derived from those models to understanding the abundance and fine scale hydrologic niches of riparian plant species in the Colorado River ecosystem downstream of Glen Canyon Dam, which has experienced vegetation expansion attributed to river regulation, including hydropeaking that began in 1964. Results At the regional scale, species with greater wetland dependence exhibited increasingly negative responses to hydropeaking across 1 496 species, consistent with previous studies at smaller scales. At the local scale of the Colorado River, we found that species inhabiting near-channel habitat characterized by daily inundation and exposure had positive modeled responses to hydropeaking, consistent with a long history of selection for species tolerant of hydropeaking. In contrast, species inhabiting the zone immediately above peak daily river stage had negative modeled responses to hydropeaking, suggesting that they are being excluded from otherwise suitable habitat nearer the channel. Conclusions These results demonstrate that hydropeaking can impact species distributions from local to regional scales by excluding obligate wetland species and reducing habitat suitability for some facultative wetland species. These results from an arid river system are consistent with those reported from other biomes.

Arizona↗

USGS2015

Plant-plant interactions in a subtropical mangrove-to-marsh transition zone: effects of environmental drivers

Questions Does the presence of herbaceous vegetation affect the establishment success of mangrove tree species in the transition zone between subtropical coastal mangrove forests and marshes? How do plant–plant interactions in this transition zone respond to variation in two primary coastal environmental drivers? Location Subtropical coastal region of the southern United States. Methods We conducted a greenhouse study to better understand how abiotic factors affect plant species interactions in the mangrove-to-marsh transition zone, or ecotone. We manipulated salinity (fresh, brackish or salt water) and hydrologic conditions (continuously saturated or 20-cm tidal range) to simulate ecotonal environments. Propagules of the mangroves Avicennia germinans and Laguncularia racemosa were introduced to mesocosms containing an established marsh community. Both mangrove species were also introduced to containers lacking other vegetation. We monitored mangrove establishment success and survival over 22 mo. Mangrove growth was measured as stem height and above-ground biomass. Stem height, stem density and above-ground biomass of the dominant marsh species were documented. Results Establishment success of A. germinans was reduced under saturated saltwater conditions, but establishment of L. racemosa was not affected by experimental treatments. There was complete mortality of A. germinans in mesocosms under freshwater conditions, and very low survival of L. racemosa . In contrast, survival of both species in monoculture under freshwater conditions exceeded 62%. The marsh species Distichlis spicata and Eleocharis cellulosa suppressed growth of both mangroves throughout the experiment, whereas the mangroves did not affect herbaceous species growth. The magnitude of growth suppression by marsh species varied with environmental conditions; suppression was often higher in saturated compared to tidal conditions, and higher in fresh and salt water compared to brackish water. Conclusions Our results indicate that herbaceous marsh species can suppress mangrove early seedling growth. Depending on species composition and density, marsh plants can slow mangrove landward migration under predicted climate change scenarios as salinity in freshwater and oligohaline wetlands increases with rising sea levels. Change in the relative coverage of mangrove forests and marshes will depend on both the ability of marsh species to migrate further inland as mangroves advance, and the ability of shoreline mangroves to adjust to rising sea level through accretionary processes.

Journal of Vegetation Science↗

USGS2009

A Chronosequence Feasibility Assessment of Emergency Fire Rehabilitation Records within the Intermountain Western United States - Final Report to the Joint Fire Science Program - Project 08-S-08

Department of the Interior (DOI) bureaus have invested heavily (for example, the U.S. Bureau of Land Management (BLM) spent more than $60 million in fiscal year 2007) in seeding vegetation for emergency stabilization and burned area rehabilitation of non-forested arid lands over the past 10 years. The primary objectives of these seedings commonly are to (1) reduce the post-fire dominance of non-native annual grasses, such as cheatgrass (Bromus tectorum) and red brome (Bromus rubens); (2) minimize the probability of recurrent fire; and (3) ultimately produce desirable vegetation characteristics (for example, ability to recover following disturbance [resilience], resistance to invasive species, and a capacity to support a diverse flora and fauna). Although these projects historically have been monitored to varying extents, land managers currently lack scientific evidence to verify whether seeding arid and semiarid lands achieves desired objectives. Given the amount of resources dedicated to post-fire seeding projects, a synthesis of information determining the factors that result in successful treatments is critically needed. Although results of recently established experiments and monitoring projects eventually will provide useful insights for the future direction of emergency stabilization and burned area rehabilitation programs, a chronosequence approach evaluating emergency stabilization and burned area rehabilitation treatments (both referenced hereafter as ESR treatments) over the past 30 years could provide a comprehensive assessment of treatment success across a range of regional environmental gradients. By randomly selecting a statistically robust sample from the population of historic ESR treatments in the Intermountain West, this chronosequence approach would have inference for most ecological sites in this region. The goal of this feasibility study was to compile and examine historic ESR records from BLM field offices across the Intermountain West to determine whether sufficient documentation existed for a future field-based chronosequence project. We collected ESR records and data at nine BLM field offices in four States (Oregon, Idaho, Nevada, and Utah) and examined the utility of these data for the development of a chronosequence study of post-fire seeding treatments from multiple sites and different ages (since seeding) throughout the Intermountain West. We collected records from 730 post-fire seeding projects with 1,238 individual seeding treatments. Records from each project ranged from minimal reporting of the project's occurrence to detailed documentation of planning, implementation, and monitoring. Of these 1,238 projects, we identified 468 (38 percent) that could potentially be used to implement a field-based chronosequence study. There were 206 ground-seeding treatments and 262 aerial-seeding treatments within this initial population, not including hand plantings. We also located a considerable number of additional records from other potential field offices that would be available for the chronosequence study but have yet to be compiled for this feasibility report. There are a number of potential challenges involved in going forward with a field-based chronosequence study derived from data collected at these nine BLM offices. One challenge is that not all seed mixtures in ESR project files have on-the-ground confirmation about what was sown or rates of application. Most projects, particularly records before 2000, just list the planned or purchased seed mixtures. Although this could potentially bias assessments of factors influencing establishment rates of individual species for treatments conducted before 2000, a chronosequence study would not be intended to assess success solely at the species-level. Treatment success would be evaluated based on the establishment of healthy vegetation communities, such as the abundance and density of perennial species, regardless of their lifeforms (grasses, fo

Open-File Report↗

USGS2001

Methyl tert-butyl ether biodegradation by indigenous aquifer microorganisms under natural and artificial oxic conditions

Microbial communities indigenous to a shallow groundwater system near Beaufort, SC, degraded milligram per liter concentrations of methyl tert -butyl ether (MTBE) under natural and artificial oxic conditions. Significant MTBE biodegradation was observed where anoxic, MTBE-contaminated groundwater discharged to a concrete-lined ditch. In the anoxic groundwater adjacent to the ditch, concentrations of MTBE were >1 mg/L. Where groundwater discharge occurs, dissolved oxygen (DO) concentrations beneath the ditch exceeded 1.0 mg/L to a depth of 1.5 m, and MTBE concentrations decreased to <1 μg/L prior to discharge. MTBE mass flux calculations indicate that 96% of MTBE mass loss occurs in the relatively small oxic zone prior to discharge. Samples of a natural microbial biofilm present in the oxic zone beneath the ditch completely degraded [U- 14 C]MTBE to [ 14 C]CO 2 in laboratory liquid culture studies, with no accumulation of intermediate compounds. Upgradient of the ditch in the anoxic, MTBE- and BTEX-contaminated aquifer, addition of a soluble oxygen release compound resulted in oxic conditions and rapid MTBE biodegradation by indigenous microorganisms. In an observation well located closest to the oxygen addition area, DO concentrations increased from 0.4 to 12 mg/L in <60 days and MTBE concentrations decreased from 20 to 3 mg/L. In the same time period at a downgradient observation well, DO increased from <0.2 to 2 mg/L and MTBE concentrations decreased from 30 to <5 mg/L. These results indicate that microorganisms indigenous to the groundwater system at this site can degrade milligram per liter concentrations of MTBE under natural and artificial oxic conditions.

Environmental Science & Technology↗

USGS2022

Assessing per- and polyfluoroalkyl substances (PFAS) in sediments and fishes in a large, urbanized estuary and the potential human health implications

The primary source of chronic exposures to per- and polyfluoroalkyl substances (PFASs) in humans is through the ingestion of contaminated foods and drinking water, with fish and other seafood being a major contributor. Nevertheless, there is scant literature on the dietary exposure to PFASs for the general United States (U.S.) population. The Tampa Bay (Florida, USA) region has the highest population density in the State and communities and their attendant support services are arrayed in an urban to semi-rural continuum from the head of the Bay to the ocean mouth. Tampa Bay supports productive recreational and commercial fisheries, providing a diverse community of species. A variety of potential PFAS sources surround Tampa Bay including airports, industry, wastewater treatment plants, fire-fighting training areas and military installations. The objective of this study is to quantify PFASs in sediment and fishes collected from Tampa Bay to further estimate human health risks from dietary exposures. Sediment ( n = 17) and fish (24 species, n = 140) were collected throughout Tampa Bay in 2020 and 2021 and analyzed for 25 PFAS compounds. Concentrations of PFASs in sediments and edible tissues of fish ranged from 36.8 to 2,990 ng kg -1 (dry weight) and 307 to 33,600 ng kg -1 (wet weight), respectively. Generally, levels were highest in Old Tampa Bay and decreased south towards the Gulf of Mexico. Profiles in both matrices were generally dominated by perfluorooctane sulfonic acid (PFOS) with variations by location. Estimated human health risks from the consumption of contaminated fish collected in Tampa Bay exceeded concentration thresholds for minimum risk levels (MRLs) and tolerable weekly intake (TWIs) values for adults and youths. Additionally, concentrations of PFOS in edible fish tissues of several recreationally important species collected in Tampa Bay exceeded consumption guideline levels established by several governmental agencies. In the current context, the elevated levels of PFAS in Tampa Bay and the exceedances of available thresholds for potential human health risks are a cause for concern and justify a more intensive examination especially for more heavily utilized species, particularly those used in subsistence-level fishing, which, as elsewhere may be significantly under documented.

Florida↗

USGS2013

Riparian litter inputs to streams in the central Oregon Coast Range

Riparian-zone vegetation can influence terrestrial and aquatic food webs through variation in the amount, timing, and nutritional content of leaf and other litter inputs. We investigated how riparian-forest community composition, understory density, and lateral slope shaped vertical and lateral litter inputs to 16 streams in the Oregon Coast Range. Riparian forests dominated by deciduous red alder delivered greater annual vertical litter inputs to streams (504 g m −2 y −1 ) than did riparian forests dominated by coniferous Douglas-fir (394 g m −2 y −1 ). Deciduous forests also contributed greater lateral litter inputs per meter of stream bank on one side (109 g m −1 y −1 ) than did coniferous forests (63 g m −1 y −1 ). Total litter inputs from deciduous forests exceeded those from coniferous forests most strongly in November, coincident with an autumn peak in litter inputs. Lateral litter inputs contributed most to total inputs during winter in both forest types. Annual lateral litter movement increased with slope at deciduous sites, but only in spring/summer months at coniferous sites. Neither experimental removal of understory vegetation nor installation of mesh fences to block downslope litter movement affected lateral litter inputs to streams, suggesting that ground litter moves <5 m downslope annually. N concentrations of several litter fractions were higher at deciduous sites and, when combined with greater litter amounts, yielded twice as much total litter N flux to streams in deciduous than coniferous sites. The presence of red alder in riparian forests along many small streams of the deeply incised and highly dendritic basins of the Oregon Coast Range enhances total fluxes and seasonality of litter delivery to both terrestrial and aquatic food webs in this region and complements the shade and large woody debris provided by large coniferous trees.

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