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At least 145 records · Page 8Linked to original sources

USGS2016

Physiological comparisons of plasma and tissue metrics of selected inland and coastal steelhead kelts.

The physiological status of migrating steelhead kelts ( Oncorhynchus mykiss ) from the Situk River, Alaska, and two tributaries of the Clearwater River, Idaho, was evaluated to explore potential differences in post-spawning survival related to energy reserves. Blood plasma samples were analyzed for metrics related to nutritional and osmotic status, and samples of white muscle tissue collected from recent mortalities at weirs were analyzed for proximate constituents. Female kelts from the Situk River had significantly higher plasma cholesterol, triglycerides, glucose and calcium concentrations, all of which suggested higher lipid and energy stores. Additional support for energy limitation in kelts was provided by evaluating the presence of detectable proteins in the plasma. Most all kelts sampled from the Situk River populations had detectable plasma proteins, in contrast to kelts sampled from the Clearwater River tributary populations where 27 % of kelts from one tributary, and 68 % of the second tributary were below the limits of detection. We found proximate constituents of kelt mortalities were similar between the Situk and Clearwater River populations, and the lipid fraction of white muscle averaged 0.1 and 0.2 %. Our findings lend support to the hypothesis that energetic limitations likely affect post-spawn survival in the Clearwater River kelts.

Alaska, Idaho↗

USGS1976

Dynamics of storage of organochlorine pollutants in herring gulls

Several organochlorine pollutants were studied over the period of one annual cycle in caged juvenile and wild-collected adult herring gulls (Lagus argentatus) from Lake Michigan. Fish, mostly alewives (Alosa pseudoharengus), comprised the major year-round food items in the wild; alewives were also fed to the caged juveniles. Fish residues averaged around 3 mg/kg of p,p'-DDE, 2 mg/kg p,p'DDT + p,p'-TDE, and 2 mg/kg apparent PCBs. Juvenile body-burdens of DDE and PCBs showed a continual buildup after fledging, then a temporary dynamic equilibrium, related only in part to annual lipid deposition. Maximum body-burdens were reached in both juveniles and adults when winter fat deposits were declining prior to the breeding season?followed by a return to dynamic equilibrium. Residues of DDT and TDE followed closely the annual pattern of lipid deposition in both juveniles and adults. Total body-burdens in both age classes were similar after the buildups to equilibrium in juveniles in their eighth month after fledging. Seasonal variations of residues of DDE and PCBs were characterised by two phases in adults and three in juveniles, which gradually assumed the adult cyclic pattern. The maximum body-burdens attained by caged juveniles fed a diet of Lake Michigan alewives were 290 mg/kg DDE, 19 mg/kg DDT + TDE, and 200 mg/kg apparent PCBs. Residues in wild adults at the same time were 300, 4, and 200 mg/kg of the same residues. Apparent PCBs and DDE were highly accumulative, although DDE levels resulted from dietary DDE, as well as conversion from DDT.

Environmental Pollution↗

USGS1982

Organic geochemistry and pore water chemistry of sediments from Mangrove Lake, Bermuda

Mangrove Lake, Bermuda, is a small coastal, brackish-water lake that has accumulated 14 m of banded, gelatinous, sapropelic sediments in less than 10 4 yr. Stratigraphic evidence indicates that Mangrove Lake's sedimentary environment has undergone three major depositional changes (peat, freshwater gel, brackish-water gel) as a result of sea level changes. The deposits were examined geochemically in an effort to delineate sedimentological and diagenetic changes. Gas and pore water studies include measurements of sulfides, ammonia, methane, nitrogen gas, calcium, magnesium, chloride, alkalinity, and pH. Results indicate that sulfate reduction is complete, and some evidence is presented for bacterial denitrification and metal sulfide precipitation. The organic-rich sapropel is predominantly algal in origin, composed mostly of carbohydrates and insoluble macromolecular organic matter called humin with minor amounts of proteins, lipids, and humic acids. Carbohydrates and proteins undergo hydrolysis with depth in the marine sapropel but tend to be preserved in the freshwater sapropel. The humin, which has a predominantly aliphatic structure, increases linearly with depth and composes the greatest fraction of the organic matter. Humic acids are minor components and are more like polysaccharides than typical marine humic acids. Fatty acid distributions reveal that the lipids are of an algal and/or terrestrial plant source. Normal alkanes with a total concentration of 75 ppm exhibit two distribution maxima. One is centered about n -C 22 with no odd/even predominance, suggestive of a degraded algal source. The other is centered at n -C 31 with a distinct odd/even predominance indicative of a vascular plant origin. Stratigraphic changes in the sediment correlate to observed changes in the gas and pore water chemistry and the organic geochemistry.

Mangrove Lake↗

USGS1984

Accumulation of organic matter in Cretaceous oxygen-deficient depositional environments in the central Pacific Ocean

Complete records of organic-carbon-rich Cretaceous strata were continuouslycored on the flanks of the Mid-Pacific Mountains and southern Hess Rise in the central North Pacific Ocean during DSDP Leg 62. Organic-carbon-rich laminated silicified limestones were deposited in the western Mid-Pacific Mountains during the early Aptian, a time when that region was south of the equator and considerably shallower than at present. Organic-carbon-rich, laminated limestone on southern Hess Rise overlies volcanic basement and includes 136 m of stratigraphic section of late Albian to early Cenomanian age. This limestone unit was deposited rapidly as Hess Rise was passing under the equatorial high-productivity zone and was subsiding from shallow to intermediate depths. The association of volcanogenic components with organic-carbon-rich strata on Hess Rise in the Mid-Pacific Mountains is striking and suggests that there was a coincidence of mid-plate volcanic activity and the production and accumulation of organic matter at intermediate water depths in the tropical Pacific Ocean during the middle Cretaceous. Pyrolysis assays and analyses of extractable hydrocarbons indicate that the organic matter in the limestone on Hess Rise is composed mainly of lipid-rich kerogen derived from aquatic marine organisms and bacteria. Limestones from the Mid-Pacific Mountains generally contain low ratios of pyrolytic hydrocarbons to organic carbon and low hydrogen indices, suggesting that the organic matter may contain a significant proportion of land-derived material, possibly derived from numerous volcanic islands that must have existed before the area subsided. The organic carbon in all samples analyzed is isotopically light ( δ 13 C − 24 to − 29 per mil) relative to most modern rine organic carbon, and the lightest carbon is also the most lipid-rich. There is a positive linear correlation between sulfur and organic carbon in samples from Hess Rise and from the Mid-Pacific Mountains. The slopes and intercepts of C-S regression lines however, are different for each site and all are different from regression lines for samples from modern anoxic marine sediments and from Black Sea cores. The organic-carbon-rich limestones on Hess Rise, the Mid-Pacific Mountains, and other plateaus and seamounts in the Pacific Ocean are not synchronous but do occur within the same general middle Cretaceous time period as organic-carbon-rich lithofacies elsewhere in the world ocean, particularly in the Atlantic Ocean. Strata of equivalent age in the deep basins of the Pacific Ocean are not rich in organic carbon, and were deposited in oxygenated environments. This observation, together with the evidence that the plateau sites were considerably shallower and closse to the equator during the middle Creataceous suggests that local tectonic and hydrographic conditions may have resulted in high surface-water productivity and the preservation of organic matter in an oxygen-deficient environment where an expanded mid-water oxygen minimum developed and impinged on elevated platforms and seamounts.

Organic Geochemistry↗

USGS1993

Effect of pH on bacteriophage transport through sandy soils

Effects of pH and hydrophobicity on attachment and detachment of PRD- 1 and MS- 2 in three different sandy soils were investigated in a series of laboratory-column experiments. Concentrations of the lipid-containing phage PRD- 1 decreased 3–4 orders of magnitude during passage through the 10–15-cm-long columns. Attachment of the lipid-containing phage PRD- 1 was insensitive to pH and was apparently controlled by hydrophobic interactions in soil media. The less-hydrophobic phage MS-2 acted conservatively; it was not removed in the columns at pH's 5.7–8.0. The sticking efficiency (α) in a colloid-filtration model was between 0.1 and 1 for PRD- 1 , indicating a relatively high removal efficiency. Phage attachment was reversible, but detachment under steady-state conditions was slow. An increase in pH had a moderate effect on enhancing detachment. Still, these soils should continue to release phage to virus-free water for days to weeks following exposure to virus-containing water. In sandy soils with a mass-fraction organic carbon as low as a few hundredths of a percent, pH changes in the range 5.7–8.0 should have little effect on retention of more-hydrophobic virus (e.g., PRD- 1 ), in that retardation will be dominated by hydrophobic effects. Sharp increases in pH should enhance detachment and transport of virus previously deposited on soil grains. A more hydrophilic virus (e.g., MS- 2 ) will transport as a conservative tracer in low-carbon sandy soil.

Journal of Contaminant Hydrology↗

USGS1984

Composition and energy contents of mature inshore spawning capelin ( Mallotus villosus ): Implications for seabird predators

1. Lipid levels of capelin are highest in late fall and lowest during the summer spawning season; protein levels are constant at 13–14% body wt throughout the year. 2. Ovid females contained significantly more lipid and protein and less water and had higher energy densities than males and spent females. 3. Surgically-removed egg masses made up 34.2 ± 10.3% female body wt and were very similar in composition and energy density to gravid females, differing from spent females and males in similar respects. Owing to the ovarian development of females, sexes differ in energy density only during the spawning season. 4. Sexes were similar in amino acid composition. Analysis of capelin and three other seabird forage species revealed that isoleucine levels were lower than minimum avian maintenance and growth requirements. 5. Implications for the foraging behaviour and food preferences of diving seabird predators (murres, puffins) are discussed

Comparative Biochemistry and Physiology, Part A: M↗

USGS2006

The effect of chronic chromium exposure on the health of Chinook salmon (Oncorhynchus tshawytscha)

This study was designed to determine fish health impairment of Chinook salmon ( Oncorhynchus tshawytscha ) exposed to chromium. Juvenile Chinook salmon were exposed to aqueous chromium concentrations (0–266 μg l −1 ) that have been documented in porewater from bottom sediments and in well waters near salmon spawning areas in the Columbia River in the northwestern United States. After Chinook salmon parr were exposed to 24 and 54 μg Cr l −1 for 105 days, neither growth nor survival of parr was affected. On day 105, concentrations were increased from 24 to 120 μg Cr l −1 and from 54 to 266 μg Cr l −1 until the end of the experiment on day 134. Weight of parr was decreased in the 24/120 μg Cr l −1 treatment, and survival was decreased in the 54/266 μg Cr l −1 treatment. Fish health was significantly impaired in both the 24/120 and 54/266 μg Cr l −1 treatments. The kidney is the target organ during chromium exposures through the water column. The kidneys of fish exposed to the greatest concentrations of chromium had gross and microscopic lesions (e.g. necrosis of cells lining kidney tububules) and products of lipid peroxidation were elevated. These changes were associated with elevated concentrations of chromium in the kidney, and reduced growth and survival. Also, variations in DNA in the blood were associated with pathological changes in the kidney and spleen. These changes suggest that chromium accumulates and enters the lipid peroxidation pathway where fatty acid damage and DNA damage (expressed as chromosome changes) occur to cause cell death and tissue damage. While most of the physiological malfunctions occurred following parr exposures to concentrations ≥120 μg Cr l −1 , nuclear DNA damage followed exposures to 24 μg Cr l −1 , which was the smallest concentration tested. The abnormalities measured during this study are particularly important because they are associated with impaired growth and reduced survival at concentrations ≥120 μg Cr l −1 . Therefore, these changes can be used to investigate the health of resident fish in natural waters with high chromium concentrations as well as provide insight into the mechanisms of chromium toxicity.

Aquatic Toxicology↗

USGS2013

Comparative embryotoxicity of a pentabrominated diphenyl ether mixture to common terns ( Sterna hirundo ) and American kestrels ( Falco sparverius )

Concentrations of polybrominated diphenyl ethers (PBDEs) in Forster’s tern ( Sterna forsteri ) eggs from San Francisco Bay have been reported to range up to 63 μg g −1 lipid weight. This value exceeds the lowest-observed-adverse-effect level (1.8 μg g −1 egg wet weight; ∼32 μg −1 lipid weight) reported in an embryotoxicity study with American kestrels ( Falco sparverius ). As a surrogate for Forster’s terns, common tern ( Sterna hirundo ) eggs were treated by air cell injection with corn oil vehicle (control) or a commercial penta-BDE formulation (DE-71) at nominal concentrations of 0.2, 2, and 20 μg g −1 egg. As a positive control, kestrel eggs received vehicle or 20 μg DE-71 g −1 egg. In terns, there were no effects of DE-71 on embryonic survival, and pipping or hatching success; however, treated eggs hatched later (0.44 d) than controls. Organ weights, organ-to-body weight ratios, and bone lengths did not differ, and histopathological observations were unremarkable. Several measures of hepatic oxidative stress in hatchling terns were not affected by DE-71, although there was some evidence of oxidative DNA damage (8-hydroxy-deoxyguanosine; 8-OH-dG). Although DE-71 did not impair pipping and hatching of kestrels, it did result in a delay in hatch, shorter humerus length, and reduced total thyroid weight. Concentrations of oxidized glutathione, reduced glutathione, thiobarbituric acid reactive substances, and 8-OH-dG in liver were greater in DE-71-treated kestrels compared to controls. Our findings suggest common tern embryos, and perhaps other tern species, are less sensitive to PBDEs than kestrel embryos.

San Francisco Bay;Poplar Island↗

USGS2023

Organohalogenated contaminants in multiple life stages of the Pacific lamprey (Entosphenus tridentatus), Oregon, USA

Pacific lamprey (Entosphenus tridentatus) are ecologically and culturally important anadromous animals native to the West Coast of the United States. Pacific lamprey populations are in decline, and contaminants may be a contributing factor. Between 2017 and 2021, three life stages of Pacific lamprey and collocated sediment samples were collected in Oregon (larval lamprey, sediment, and returning adult lamprey) and off the coast of Oregon and Washington (ocean juvenile lamprey). Tissue and sediment samples were analyzed for 56 organohalogenated compounds that included legacy pesticides, current use pesticides, polybrominated diphenyl ether congeners, and polychlorinated biphenyl congeners. Organohalogenated compounds were detected in all three Pacific lamprey life stages. The organohalogenated compounds detected in collocated sediment and larval lamprey samples were generally dissimilar, and compounds detected in larval lamprey indicate potential point sources along the rivers. Ocean-caught juvenile lamprey had significantly higher lipid contents than returning adult lamprey, but lipid content and concentrations of select compounds were not strongly correlated. Concentrations of select compounds detected in both ocean juvenile and returning adult lamprey were either not significantly different or were higher in returning adult lamprey. Concentrations of some compounds in returning adult lamprey—which are consumed by Indigenous peoples—exceeded state and national human health consumption thresholds. Collaboration among Tribes and public-sector agencies helped make this study successful.

Oregon↗

USGS2019

Diet predictions of Lake Ontario salmonines based on fatty acids and correlations between their fat content and thiamine concentrations

Thiamine Deficiency Complex (TDC) limits early life stage survival of salmonines. Consuming fatty prey has been hypothesized as a cause of thiamine deficiency; however, this relationship has not been evaluated in the Laurentian Great Lakes where TDC occurs. We found that alewife ( Alosa pseudoharengus ) have higher lipid content than other common Lake Ontario prey fish. In addition, alewife were predicted as the most consumed prey for brown trout ( Salmo trutta ), Chinook salmon ( Oncorhynchus tshawytscha ), coho salmon ( O. kisutch ), lake trout ( Salvelinus namaycush ), and steelhead trout ( O. mykiss ); however, the relative importance of alewife in diet composition varied within and among species. Overall, species with greater predicted consumption of alewife had lower egg and muscle thiamine concentrations. Negative correlations between thiamine concentrations and both lipid content and fatty acid concentrations (mg/mg of wet tissue) were limited to brown trout. Similarly, negative correlations between fatty acid proportions (i.e., cumulative proportions of polyunsaturated fatty acids [PUFA] and monounsaturated fatty acids [MUFA]) and thiamine concentrations were only observed for brown and lake trout. Combining data from all species produced curvilinear correlations between thiamine concentrations (egg and muscle) and fatty acid composition (eggs and belly flap). Proportions of PUFAs had negative correlations with thiamine concentrations while proportions of MUFAs had positive correlations. These results provide evidence that, in some cases, salmonine fatty acid composition negatively correlates with thiamine concentrations in Lake Ontario; however, additional research is needed to confirm that this mechanism causes TDC in salmonines, and to understand additional factors potentially associated with TDC.

Lake Ontario↗

USGS2007

Age and trophic position dominate bioaccumulation of mercury and organochlorines in the food web of Lake Washington

Understanding the mechanisms of bioaccumulation in food webs is critical to predicting which food webs are at risk for higher rates of bioaccumulation that endanger the health of upper-trophic predators, including humans. Mercury and organochlorines were measured concurrently with stable isotopes of nitrogen and carbon in key fishes and invertebrates of Lake Washington to explore important pathways of bioaccumulation in this food web. Across the food web, age and trophic position together were highly significant predictors of bioaccumulation. Trophic position was more important than age for predicting accumulation of mercury, ???DDT, and ???-chlordane, whereas age was more important than trophic position for predicting ???PCB. Excluding age from the analysis inflated the apparent importance of trophic position to bioaccumulation for all contaminants. Benthic and pelagic habitats had similar potential to bioaccumulate contaminants, although higher ???-chlordane concentrations in organisms were weakly associated with more benthic carbon signals. In individual fish species, contaminant concentrations increased with age, size, and trophic position (??15N), whereas relationships with carbon source (??13C) were not consistent. Lipid concentrations were correlated with contaminant concentrations in some but not all fishes, suggesting that lipids were not involved mechanistically in bioaccumulation. Contaminant concentrations in biota did not vary among littoral sites. Collectively, these results suggest that age may be an important determinant of bioaccumulation in many food webs and could help explain a significant amount of the variability in apparent biomagnification rates among food webs. As such, effort should be made when possible to collect information on organism age in addition to stable isotopes when assessing food webs for rates of biomagnification. ?? 2006 Elsevier B.V. All rights reserved.

Science of the Total Environment↗

USGS2010

Persistent organic pollutants in fish tissue in the mid-continental great rivers of the United States

Great rivers of the central United States (Upper Mississippi, Missouri, and Ohio rivers) are valuable economic and cultural resources, yet until recently their ecological condition has not been well quantified. In 2004–2005, as part of the Environmental Monitoring and Assessment Program for Great River Ecosystems (EMAP-GRE), we measured legacy organochlorines (OCs) (pesticides and polychlorinated biphenyls, PCBs) and emerging compounds (polybrominated diphenyl ethers, PBDEs) in whole fish to estimate human and wildlife exposure risks from fish consumption. PCBs, PBDEs, chlordane, dieldrin and dichlorodiphenyltrichloroethane (DDT) were detected in most samples across all rivers, and hexachlorobenzene was detected in most Ohio River samples. Concentrations were highest in the Ohio River, followed by the Mississippi and Missouri Rivers, respectively. Dieldrin and PCBs posed the greatest risk to humans. Their concentrations exceeded human screening values for cancer risk in 27–54% and 16–98% of river km, respectively. Chlordane exceeded wildlife risk values for kingfisher in 11–96% of river km. PBDE concentrations were highest in large fish in the Missouri and Ohio Rivers (mean > 1000 ng g −1 lipid), with congener 47 most prevalent. OC and PBDE concentrations were positively related to fish size, lipid content, trophic guild, and proximity to urban areas. Contamination of fishes by OCs is widespread among great rivers, although exposure risks appear to be more localized and limited in scope. As an indicator of ecological condition, fish tissue contamination contributes to the overall assessment of great river ecosystems in the U.S.

Science of the Total Environment↗

USGS2025

Cleaner cuts: Farmed fish and skin-off fillets are lower in per- and polyfluoroalkyl substances (PFAS)

The ubiquitous occurrence and persistence of per- and polyfluoroalkyl substances (PFAS) in all environmental matrices and biota poses significant health risks to humans. Fish consumption is one of the main pathways humans are exposed to PFAS, yet general patterns in factors influencing PFAS content in fish fillets remain unknown. We assembled information on PFAS content (total quantified PFAS, PFOS, PFOA, and others) in fish fillets to assess the effect of fish origin (marine, freshwater, wild, or farmed), fillet type (skin-on or skin-off), and lipid content on PFAS variation across environments at a global scale. We found that these factors influenced PFAS contents in fish fillets, with concentrations reaching up to 2149 ng•g wet mass −1 (WM). Specifically, PFOS and PFOA in skin-off fillets were consistently lower in farmed than wild fish across freshwater and marine environments. In freshwater wild fish, PFOS was lower in skin-off fillets than skin-on fillets at group and species levels, and multiple PFAS showed an inverse relationship with the lipid content of skin-off fillets, though the slopes showed varying steepness depending on the carbon chain length and functional group of the PFAS. However, the high variability of PFAS content across sites in aquatic environments and the complexity of PFAS bioaccumulation mechanisms in fish tissues may lead to variable results at a fine scale (i.e. , species level); this highlights general patterns of factors influencing PFAS bioaccumulation that may inform the management of human exposure to PFAS through dietary consumption.

Science of the Total Environment↗

USGS1999

Changes in proximate composition and somatic energy content for Pacific sand lance ( Ammodytes hexapterus ) from Kachemak Bay, Alaska relative to maturity and season

Mean dry-weight energy values of adult Pacific sand lance ( Ammodytes hexapterus ) peaked in spring and early summer (20.91 kJg −1 for males, 21.08 kJg −1 for females), then declined by about 25% during late summer and fall (15.91 kJg −1 for males, 15.74 kJg −1 for females). Late summer declines in energy density paralleled gonadal development. Gender differences in energy density (males<females) were only apparent from August to October. Adult sand lance spawn in October, entering the winter with close to their minimum whole body energy content. Juvenile sand lance exhibited a relatively constant protein to lipid ratio until they reached 80 mm fork length. Thereafter, relative proportions of protein remained constant while lipid proportions increased significantly. Dry weight energy densities of juveniles increased from a minimum 16.67 kJg −1 to a maximum of 19.68 kJg −1 , and (per g) are higher than adults in late summer. The seasonal food value of adult sand lance to predators varies markedly, but maximum energetic value coincides with important feeding periods for marine mammals, fish, and seabirds.

Alaska↗

USGS1997

Factors controlling the abundance of organic sulfur in flash pyrolyzates of Upper Cretaceous kerogens from Sergipe Basin, Brazil

The molecular and elemental composition of immature kerogens isolated from Upper Cretaceous marine carbonates from Sergipe Basin, Brazil were investigated using combined pyrolysis-gas chromatography/mass spectrometry and organic petrographic techniques. The kerogens are predominantly composed of reddish-fluorescing amorphous organic matter (AOM) and variable amounts of yellow-fluorescing alginite and liptodetrinite. The abundance of organic sulfur in the kerogens inferred from the ratio 2-ethyl-5-methylthiophene/(1,2-dimethylbenzene + dec-1-ene) in the pyrolyzates is variable and may be related to changes in the type of primary organic input and/or to variations in rates of bacterial sulfate reduction. A concomitant increase in S/C and O/C ratios determined in situ using the electron microprobe is observed in AOM and alginites and may be related to a progressive oxidation of the organic matter during sulfurization. The S/C ratio of the AOM is systematically higher than the S C ratio of the alginites. Combined with a thiophene distribution characteristic of pyrolyzates of Type II organic matter, the higher S/C of AOM in Sergipe kerogens suggests that sulfurization and incorporation of low-molecular weight lipids derived from normal marine organic matter into the kerogen structure predominated over direct sulfurization of highly aliphatic algal biomacromolecules.The molecular and elemental composition of immature kerogens isolated from Upper Cretaceous marine carbonates from Sergipe Basin, Brazil were investigated using combined pyrolysis-gas chromatography/mass spectrometry and organic petrographic techniques. The kerogens are predominantly composed of reddish-fluorescing amorphous organic matter (AOM) and variable amounts of yellow-fluorescing alginite and liptodetrinite. The abundance of organic sulfur in the kerogens inferred from the ratio 2-ethyl-5-methylthiophene/(1,2-dimethylbenzene+dec-1-ene) in the pyrolyzates is variable and may be related to changes in the type of primary organic input and/or to variations in rates of bacterial sulfate reduction. A concomitant increase in S/C and O/C ratios determined in situ using the electron microprobe is observed in AOM and alginites and may be related to a progressive oxidation of the organic matter during sulfurization. The S/C ratio of the AOM is systematically higher than the S/C ratio of the alginites. Combined with a thiophene distribution characteristic of pyrolyzates of Type II organic matter, the higher S/C of AOM in Sergipe kerogens suggests that sulfurization and incorporation of low-molecular weight lipids derived from normal marine organic matter into the kerogen structure predominated over direct sulfurization of highly aliphatic algal biomacromolecules.

Conference Paper↗

USGS2001

National-scale, field-based evaluation of the biota - Sediment accumulation factor model

The biota - sediment accumulation factor (BSAF) model has been suggested as a simple tool to predict bioaccumulation of hydrophobic organic compounds (HOCs)in fish and other aquatic biota from measured concentrations in sediment based on equilibrium partitioning between the sediment organic carbon and biotic lipid pools. Currently, evaluation of this model as a predictive tool has been limited to laboratory studies and small-scale field studies, using a limited number of biotic species. This study evaluates the model, from field data, for a suite of organochlorine HOCs from paired fluvial sediment and biota (fish and bivalves) samples throughout the United States and over a large range of biotic species. These data represent a real-world, worst-case scenario of the model because environmental variables are not controlled. Median BSAF values for fish (3.3) and bivalves (2.8) were not statistically different but are higher than theoretically predicted values (1-2). BSAF values varied significantly in a few species. Differences in chemical-specific BSAF values were not observed in bivalves but were statistically significant in fish. The HOCs with differing BSAF values were those known to be biotransformed. Sediment organic carbon content and biota lipid content had no effect on BSAF values in fish and only a weak effect in bivalves. This study suggests that the BSAF model could be useful under in situ riverine conditions as a first-level screening tool for predicting bioaccumulation; however, variability in BSAF values may impose limits on its utility.

Environmental Science & Technology↗

USGS1998

Comparison of streambed sediment and aquatic biota as media for characterizing trace elements and organochlorine compounds in the Willamette Basin, Oregon

During 1992-93, 27 organochlorine compounds (pesticides plus total PCB) and 17 trace elements were analyzed in bed sediment and aquatic biota from 20 stream sites in the Willamette Basin as part of the U.S. Geological Survey's National Water-Quality Assessment Program. Data from each medium were compared to evaluate their relative effectiveness for assessing occurrence (broadly defined as documentation of important concentrations) of these constituents. Except for Cd, Hg, Se, and Ag, trace element concentrations generally were higher in bed sediment than in biota. Conversely, although frequencies of detection for organochlorine compounds in biota were only slightly greater than in bed sediment, actual concentrations in biota (normalized to lipid) were as much as 19 times those in sediment (normalized to organic carbon). Sculpin (Cottus spp.) and Asiatic clams (Corbicula fluminea), found at 14 and 7 sites, respectively, were the most widespread taxa collected during the study. Concentrations of trace elements, particularly As and Cu, were typically greater in Asiatic clams than in sculpin. In contrast, almost half of the organochlorine compounds analyzed were found in sculpin, but only DDT and its degradation products were detected in Asiatic clams; this may be related to the lipid content of sculpin, which was about three times higher than for clams. Thus, the medium of choice for assessing occurrence depends largely on the constituent(s) of interest.

Environmental Monitoring and Assessment↗

USGS2025

Multi-scale spectroscopy to map intertidal microbial biofilm community and trait diversity

Intertidal microbial biofilms, or microphytobenthos, support estuarine biogeochemical cycling, the physical stability of mudflats, and food webs, particularly those of migratory shorebirds. Photosynthetic biofilms dominated by diatoms, cyanobacteria, and chlorophytes represent a significant fraction of biofilm biomass and contain pigments that can be detected with remote sensing. These diverse biofilm community types vary in indicator pigments and functional traits related to biogeochemical cycling and nutritional quality. We modeled and mapped spatial variation in intertidal biofilm distribution, quantity, diversity, and functional traits using multi-scale spectroscopic data collected within southern San Francisco Bay, California, USA (South SFB). We developed a new biofilm index (B-index) from 5 mm HySpex spectra to detect biofilm presence. We developed single and multiple response partial least squares regression (PLS) models of chlorophyll -a (chl -a ; biomass indicator), indicator pigments: fucoxanthin and diadinoxanthin (diatoms), zeaxanthin (cyanobacteria), and chl -b (chlorophytes), and functional traits: carbohydrates, lipids, and total organic carbon from paired in situ biofilm data and field spectra. The B-index and PLS models were scaled to South SFB with a 3.7 m AVIRIS-NG hyperspectral image. The model %RMSE calculated from AVIRIS-NG test samples ranged from 12.7% for chl -a to 49% for chl -b ; for six of the eight models, %RMSE was 23% or below. Mapped community types differed in mapped traits, with average lipid concentrations three times higher in areas indicated as diatoms compared to other groups. Available maps depict for the first time the spatial variation of an important shorebird food resource and inform the contribution of intertidal biofilm in carbon and nutrient cycling.

California↗