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USGS2021

Science needs of southeastern grassland species of conservation concern: A framework for species status assessments

The unglaciated southeastern United States is a biodiversity hotspot, with a disproportionate amount of this biodiversity concentrated in grasslands. Like most hotspots, the Southeast is also threatened by human activities, with the total reduction of southeastern grasslands estimated as 90 percent (upwards to 100 percent for some types) and with many threats escalating today. This report summarizes the results of a multistakeholder workshop organized by the Southeastern Grasslands Initiative and the U.S. Geological Survey, held in January 2020 to provide a scientific needs assessment to help inform the Species Status Assessment (SSA) process under the U.S. Endangered Species Act, with a focus on grassland species and communities of conservation concern in the southeastern United States. This report reviews the ecology of southeastern grasslands, including influences on their origin, maintenance, and high species richness and endemism; presents findings from the workshop; and discusses science questions, hypotheses, and possibilities for future research projects to help fill key knowledge gaps. Participants in the January 2020 workshop, representing diverse expertise in various topics in southeastern grassland ecology, were tasked with identifying major threats to grassland species in the Southeast as well as potential ways to make the SSA process more efficient and effective. An underlying assumption and starting place for workshop discussion was that an ecosystem-based approach to the SSA process is more cost-efficient than a species-by-species approach, in large part because many species with similar biological requirements can be addressed by the same actions. Nevertheless, one partner in this effort, the U.S. Fish and Wildlife Service, does require specific attention be given to taxa that have been petitioned for Federal listing, though as often as possible these taxa are considered alongside a larger group of priority taxa with an ecosystem approach. For group discussions, workshop participants followed a modified “World Café” method, a structured conversational approach for knowledge sharing. Group discussions focused on five categories of threats to grassland communities and species: (1) habitat loss, fragmentation, and disruption of functional population connectivity; (2) climate change, especially changes in temperature and precipitation, including intensity and seasonality, and impacts on soil moisture, groundwater levels, and other ecosystem parameters; (3) changes to disturbance regimes, as influenced by climate and land-use change, extinctions, and human attitudes and behaviors; (4) invasive species (not limited to nonnative species); and (5) localized or subregional impacts such as sea-level rise. In addition to group discussions, workshop participants—as well as other grassland experts who were unable to attend the workshop—completed a preworkshop survey concerning challenges and opportunities for grassland conservation. Findings reported here under each of these topics represent ideas, problems, hypotheses, and questions identified by a diverse community of grassland managers and researchers which may be addressed by future research and monitoring in southeastern grassland ecosystems to help guide science-based conservation of grassland-dependent species.

Alabama, Arkansas, Florida, Georgia, Kentucky, Lou↗
USGS2013

Terrestrial salamander abundance on reclaimed mountaintop removal mines

Mountaintop removal mining, a large-scale disturbance affecting vegetation, soil structure, and topography, converts landscapes from mature forests to extensive grassland and shrubland habitats. We sampled salamanders using drift-fence arrays and coverboard transects on and near mountaintop removal mines in southern West Virginia, USA, during 2000–2002. We compared terrestrial salamander relative abundance and species richness of un-mined, intact forest with habitats on reclaimed mountaintop removal mines (reclaimed grassland, reclaimed shrubland, and fragmented forest). Salamanders within forests increased in relative abundance with increasing distance from reclaimed mine edge. Reclaimed grassland and shrubland habitats had lower relative abundance and species richness than forests. Characteristics of reclaimed habitats that likely contributed to lower salamander abundance included poor soils (dry, compacted, little organic matter, high rock content), reduced vertical structure of vegetation and little tree cover, and low litter and woody debris cover. Past research has shown that salamander populations reduced by clearcutting may rebound in 15–24 years. Time since disturbance was 7–28 years in reclaimed habitats on our study areas and salamander populations had not reached levels found in adjacent mature forests.

West Virginia↗
USGS2006

Lesser scaup winter foraging and nutrient reserve acquisition in east-central Florida

Lesser scaup (Aythya affinis) populations have been declining since the late 1970s. One of the explanations to account for this decline, the spring-condition hypothesis (SCH), is based on the premise that scaup are limited by their ability to acquire or maintain nutrient reserves during migration to the breeding grounds, leading to an impairment of their reproductive potential. Available evidence suggests that endogenous reserves required for reproduction are obtained at a later stage of migration or after arrival at the breeding grounds, not wintering sites. However, only one study has addressed body-condition levels on a southern wintering site in the last decade, with results limited to the wintering grounds on the Mississippi Flyway. We documented foraging behavior, nutrient levels, and body mass of lesser scaup in east-central Florida, USA, where 62% of the Atlantic Flyway population overwinters, during the winters of 2002 and 2003. Diurnal foraging did not increase seasonally. Nocturnal foraging increased seasonally by 76% or 43 minutes per night in females and by 478% or 1.9 hours per night in males. Measures of body condition did not change seasonally during 2002 for either sex. Between early and later winter in 2003 corrected body mass (CBM) and lipid reserves of male scaup increased 77 g and 39 g, respectively. Our results suggest that lesser scaup maintain or may slightly improve their physiological condition in east-central Florida during winter. Lower body mass and differences in nutrient levels in east-central Florida, compared to a wintering site in Louisiana, likely stem from geographic variation and lower thermal requirements associated with the warmer Florida environment. Lesser scaup depart Florida with sufficient reserves to initiate spring migration, but they maximize nutrient reserves used during reproduction elsewhere during migration or on the breeding grounds. These results suggest that maintaining the ecological integrity of this wintering ground is critical in minimizing winter mortality and preventing it from becoming an ancillary factor in current declines. Future research should address understanding survival rates during spring migration and at critical staging areas to provide new insight into the ramifications of scaup leaving wintering habitats such as MINWR with lower body condition than at other wintering sites in other flyways.

Journal of Wildlife Management↗
USGS2016

Survival estimates for reintroduced populations of the Chiricahua Leopard Frog ( Lithobates chiricahuensis )

Global amphibian declines have been attributed to a number of factors including disease, invasive species, habitat degradation, and climate change. Reintroduction is one management action that is commonly used with the goal of recovering imperiled species. The success of reintroductions varies widely, and evaluating their efficacy requires estimates of population viability metrics, such as underlying vital rates and trends in abundance. Although rarely quantified, assessing vital rates for recovering populations provides a more mechanistic understanding of population growth than numerical trends in population occupancy or abundance. We used three years of capture-mark-recapture data from three breeding ponds and a Cormack-Jolly-Seber model to estimate annual apparent survival for reintroduced populations of the federally threatened Chiricahua Leopard Frog ( Lithobates chiricahuensis ) at the Buenos Aires National Wildlife Refuge (BANWR), in the Altar Valley, Arizona, USA. To place our results in context, we also compiled published survival estimates for other ranids. Average apparent survival of Chiricahua Leopard Frogs at BANWR was 0.27 (95% CI [0.07, 0.74]) and average individual capture probability was 0.02 (95% CI [0, 0.05]). Our apparent survival estimate for Chiricahua Leopard Frogs is lower than for most other ranids and is not consistent with recent research that showed metapopulation viability in the Altar Valley is high. We suggest that low apparent survival may be indicative of high emigration rates. We recommend that future research should estimate emigration rates so that actual, rather than apparent, survival can be quantified to improve population viability assessments of threatened species following reintroduction efforts.

Copeia↗
USGS2012

U.S. Department of the Interior Southeast Climate Science Center Science and Operational Plan

Climate change challenges many of the basic assumptions routinely used by conservation planners and managers, including the identification and prioritization of areas for conservation based on current environmental conditions and the assumption those conditions could be controlled by management actions. Climate change will likely alter important ecosystem drivers (temperature, precipitation, and sea-level rise) and make it difficult, if not impossible, to maintain current environmental conditions into the future. Additionally, the potential for future conservation of non-conservation lands may be affected by climate change, which further complicates resource planning. Potential changes to ecosystem drivers, as a result of climate change, highlight the need to develop and adapt effective conservation strategies to cope with the effects of climate and landscape change. The U.S. Congress, recognized the potential effects of climate change and authorized the creation of the U.S. Geological Survey National Climate Change and Wildlife Science Center (NCCWSC) in 2008. The directive of the NCCWSC is to produce science that supports resource-management agencies as they anticipate and adapt to the effects of climate change on fish, wildlife, and their habitats. On September 14, 2009, U.S. Department of the Interior (DOI) Secretary Ken Salazar signed Secretarial Order 3289 (amended February 22, 2010), which expanded the mandate of the NCCWSC to address climate-change-related impacts on all DOI resources. Secretarial Order 3289 "Addressing the Impacts of Climate Change on America's Water, Land, and Other Natural and Cultural Resources," established the foundation of two partner-based conservation science entities: Climate Science Centers (CSC) and their primary partners, Landscape Conservation Cooperatives (LCC). CSCs and LCCs are the Department-wide approach for applying scientific tools to increase the understanding of climate change, and to coordinate an effective response to its impacts on tribes and the land, water, ocean, fish and wildlife, and cultural-heritage resources that DOI manages. The NCCWSC is establishing a network of eight DOI CSCs (Alaska, Southeast, Northwest, North Central, Pacific Islands, Southwest, Northeast, and South Central) that will work with a variety of partners and stakeholders to provide resource managers the tools and information they need to help them anticipate and adapt conservation planning and design for projected climate change. The Southeast CSC, a federally led research collaboration hosted by North Carolina State University, was established in 2010. The Southeast CSC brings together the expertise of federal and university scientists to address climate-change priority needs of federal, state, non-governmental, and tribal resource managers. This document is the first draft of a science and operational plan for the Southeast CSC. The document describes operational considerations, provides the context for climate-change impacts in the Southeastern United States, and establishes six major science themes the Southeast CSC will address in collaboration with partners. This document is intended to be reevaluated and modified as partner needs change.

Open-File Report↗
USGS1986

Alaska goose populations: Past, present and future

Many people think Alaska remains a pristine wilderness and that wildlife populations are still at prehistoric levels. This very likely is not true for the 11 species and subspecies of geese that nest in Alaska. Large, widely dispersed populations of geese were observed near the turn of the century. Even in the early 1970s, it was estimated that Alaskan habitats were used by 915,000 nesting and 100,000 additional migrating geese each year (King and Lensink 1971). Since then the Alaskan populations of most of these species have declined, some to dramatically low levels (Raveling 1984), even though habitats within the state have remained largely unaltered by man. The U.S. has treaties with Canada, Mexico, Japan and the Soviet Union to protect geese and other shared migratory birds, confirming international concern for the welfare of this resource. Cooperative research on Alaskan geese during the past several decades has given understanding of their migration corridors, staging and wintering habitats, and the principle places where they are hunted, thereby providing information needed to develop effective management plans. The only attempt to re-introduce geese in Alaska has been in the Aleutian Islands. Other opportunities exist. It is our intent here to: (1) review the historic and current status and important habitats of geese that occur in Alaska; (2) identify existing and potential threats to these populations; and (3) offer alternative management approaches for geese in Alaska.

Alaska↗
USGS2014

Uncertainty, robustness, and the value of information in managing a population of northern bobwhites

The abundance of northern bobwhites (Colinus virginianus) has decreased throughout their range. Managers often respond by considering improvements in harvest and habitat management practices, but this can be challenging if substantial uncertainty exists concerning the cause(s) of the decline. We were interested in how application of decision science could be used to help managers on a large, public management area in southwestern Florida where the bobwhite is a featured species and where abundance has severely declined. We conducted a workshop with managers and scientists to elicit management objectives, alternative hypotheses concerning population limitation in bobwhites, potential management actions, and predicted management outcomes. Using standard and robust approaches to decision making, we determined that improved water management and perhaps some changes in hunting practices would be expected to produce the best management outcomes in the face of uncertainty about what is limiting bobwhite abundance. We used a criterion called the expected value of perfect information to determine that a robust management strategy may perform nearly as well as an optimal management strategy (i.e., a strategy that is expected to perform best, given the relative importance of different management objectives) with all uncertainty resolved. We used the expected value of partial information to determine that management performance could be increased most by eliminating uncertainty over excessive-harvest and human-disturbance hypotheses. Beyond learning about the factors limiting bobwhites, adoption of a dynamic management strategy, which recognizes temporal changes in resource and environmental conditions, might produce the greatest management benefit. Our research demonstrates that robust approaches to decision making, combined with estimates of the value of information, can offer considerable insight into preferred management approaches when great uncertainty exists about system dynamics and the effects of management.

Florida↗
USGS2018

Raptor selection of captive reared and released Galliform birds

Captive rearing and release of birds in the order Galliformes remains a popular management tactic despite low survival rates. We investigated avian predator selection of captive‐reared northern bobwhites ( Colinus virginianus ) as a potential driver of their high mortality. We simulated avian predator hunts on a flushing pair of bobwhites during trials conducted from 6 February 2015 to 14 February 2015 in Texas, USA. When presented a choice of a captive‐reared bobwhite or wild bobwhite, a Harris's hawk ( Parabuteo unicinctus ) pursued a captive‐reared bobwhite in 8 of 10 flight trials. This selective rate, combined with observations from auxiliary research indicate avian predation may be a greater risk for captive‐reared birds than wild birds. The success of captive‐rearing and release efforts may benefit from a better understanding of how to more adequately prepare captive‐reared birds for release.

Texas↗
USGS2010

Chytridiomycosis widespread in Anurans of Northeastern United States

An emerging disease of amphibians caused by the chytrid fungus Batrachochytrium dendrobatidis has been associated with morbidity, mortality, and extinction of species. Typically, researchers have detected B. dendrobatidis only when examining amphibians for causes of mortalities; few data exist on infection rates where mortalities are lacking. During May-September 2000-2002 we obtained amphibian specimens killed by vehicles and others collected at remote off-road sites throughout Maine, USA, and from federal lands in 5 states in the Northeast. We detected infected specimens, mostly green frogs ( Rana clamitans ), at 5 of 7 national wildlife refuges, a federal waterfowl production area, and Acadia National Park. Seven of 9 species, including all Ranidae species, were infected throughout Maine; rates ranged from 14.6% in American toads ( Bufo americanus ) to 25.7% in northern leopard frogs ( Rana pipiens ). We did not detect any infections in 50 eastern gray tree frogs ( Hyla versicolor ) or 21 spring peepers ( Pseudacris crucifer ). Species that hibernate in terrestrial habitats seem to have lower rates of infection than species that hibernate in aquatic habitats. Infections peaked in spring and autumn and were associated with air temperatures optimal for B. dendrobatidis growth. The relatively high infection rates among species without documented die-offs suggest that either losses have occurred undetected, that the fungus is endemic and species have attained a level of resistance to infections becoming lethal, or that climatic conditions of the Northeast have a role in preventing infections from being lethal. Data on prevalence and distribution of this chytrid fungus in the Northeast may be useful in modeling its origins and predicting long-term ecosystem effects involving anurans.

Maine↗
USGS2018

Plague in a colony of Gunnison's prairie dogs (Cynomys gunnisoni) despite three years of infusions of burrows with 0.05% deltamethrin to kill fleas

At Valles Caldera National Preserve in New Mexico, US, infusing Gunnison's prairie dog ( Cynomys gunnisoni ) burrows with an insecticide dust containing 0.05% deltamethrin killed fleas which transmit bubonic plague. The reduction in the number of fleas per prairie dog was significant and dramatic immediately after infusions, with a suggestion that the reduction persisted for as long as 12 mo. Despite the lower flea counts, however, a plague epizootic killed >95% of prairie dogs after 3 yr of infusions (once per year). More research is necessary for a better understanding of the efficacy of insecticide dusts at lowering flea counts and protecting prairie dogs from plague.

Journal of Wildlife Diseases↗
USGS2007

Yellowstone grizzly bear investigations: Annual report of the Interagency Grizzly Bear Study Team, 2006

The contents of this Annual Report summarize results of monitoring and research from the 2006 field season. The report also contains a summary of nuisance grizzly bear ( Ursus arctos horribilis ) management actions. The Interagency Grizzly Bear Study Team (IGBST) continues to work on issues associated with counts of unduplicated females with cubs-of- the-year (COY). These counts are used to establish a minimum population size, which is then used to establish mortality thresholds for the Recovery Plan (U.S. Fish and Wildlife Service [USFWS] 1993). After considerable delays due to programming issues, a computer program that defines the rule set used by Knight et al. (1995) to differentiate unique family groups was development and tested in 2005 and 2006. Simulations using observations of collared females with COY were randomly sampled to generate datasets of observations of random females with COY. These datasets were then run though the simulations program to test the accuracy of the rules. Data are currently being summarized. This project has been completed and a manuscript was submitted to the Journal of Wildlife Management. The grizzly bear recovery plan (USFWS 1993) established human-caused mortality quotas. We used the latest information on reproduction and survival to estimate population trajectory in the same simulation model originally used by Harris (1984). A Wildlife Monographs was published in 2006. Additionally, the study team, in cooperation with several quantitative experts, reassessed how population size is indexed and how sustainable mortality rates are established. A draft report was presented to the Yellowstone Ecosystem Subcommittee in spring 2005. It was published as part of the USFWS Delisting Rule (Federal Register Vol. 70, No. 221, Nov. 17, 2005, 69853–69884) and subjected to public comment. This workshop document can be found at http://www.fws.gov/mountain-prairie/species/mammals/grizzly/yellowstone.htm. During the summer of 2006, a second workshop was held to address public comment and professional peer review. The result of this workshop was a supplement to the 2005 workshop document. This supplement can be found at http://www.fws.gov/mountain-prairie/species/mammals/grizzly/yellowstone.htm under the link Revised Methods to Estimate Population Size and Sustainable Mortality Limits. Results of those estimates are provided in Appendix A. Our project addressing the potential application of stable isotopes and trace elements to quantify consumption rates of whitebark pine ( Pinus albicaulis ) and cutthroat trout ( Oncorhynchus clarki ) by grizzly bears was completed. Our manuscript on consumption rates of whitebark pine was published in the Canadian Journal of Zoology 81:763-770. Results of the mercury studies were also published in the Canadian Journal of Zoology 82:493–501. Copies can be found on the IGBST website http://www.nrmsc.usgs.gov/research/igbst-home.htm. Based upon this work, we submitted a proposal to analyze all historic tissue samples from grizzly bears in the ecosystem. That proposal was funded and samples have been sent to a lab for isotopic analysis. We hope to have those results in early 2008. Results of DNA hair snaring work conducted on Yellowstone Lake were submitted and published in the Journal Ursus (Haroldson et al. 2005). Results of this study conducted from 1997–2000 showed a decline in fish use by grizzly bears when compared to earlier work conducted by Reinhart (1990) in 1985–1987. As a consequence, the IGBST submitted a proposal to the National Park Service and received 3 years funding to repeat that work. This project began in 2007. There are 2 graduate students and several field technicians working on the program. We completed the final field season in Grand Teton National Park evaluating habitat use both temporally and spatially between grizzly and black bears ( Ursus americanus ). We continue to use GPS technology that incorporates a spread spectrum communication system. Spread spectrum allows for transfer of stored GPS locations from the collar to a remote receiving station. Results of the 2006 field season are reported here. We plan to complete the final report in late 2007. We continued to monitor the health of whitebark pine in the Greater Yellowstone Ecosystem (GYE) in cooperation with the Greater Yellowstone Whitebark Pine Monitoring Working Group. A summary of the 2006 monitoring is also presented (Appendix B). The IGBST uses counts of winter-killed ungulates to index spring carcass abundance for grizzly bears. Likewise, we use wier counts and stream surveys to index cutthroat trout abundance. We ask Dr. Steve Cherry, Department of Mathematical Sciences, Montana State University-Bozeman, to review the protocols and make recommendations for improving them. That review and recommendations are presented in Appendix C. Finally, the state of Wyoming, following recommendations from the Yellowstone Ecosystem Subcommittee and the IGBST, launched the Bear Wise Community Effort. The focus is to minimize human/bear conflicts, minimize human-caused bear mortalities associated with conflicts, and safeguard the human community. Results of these efforts are detailed in Appendix D. The annual reports of the IGBST summarize annual data collection. Because additional information can be obtained after publication, data summaries are subject to change. For that reason, data analyses and summaries presented in this report supersede all previously published data. The study area and sampling techniques are reported by Blanchard (1985), Mattson et al. (1991 a), and Haroldson et al. (1998).

Idaho, Montana, Wyoming↗
USGS2023

Evaluating brook trout egg and alevin survival at different temperatures in simulated karst environments with marl sedimentation

Brook trout ( Salvelinus fontinalis ) have been extirpated from many karst-geology streams in West Virginia; however, the causes are not fully understood. Specifically, the impact of calcareous precipitate (marl), which is common in hard-water environments, has not been evaluated as an im- pediment to juvenile survival. Accordingly, two lab-based studies were conducted to determine if brook trout egg and alevin survival is inhibited by marl. In the first study, three aeration treatments were applied to water from a limestone spring source (13–14 C; ~300 mg L–1 hardness), resulting in different pH levels and an increasing degree of marl precipitate. Treatments included raw/untreated (RU; no marl), once-aerated (OA; limited marl), and continuously aerated (CA; significant marl) water. Brook trout eggs obtained from a local hatchery were fertilized and stocked among gravel-filled trays receiving each water type. Mortality occurred faster in CA water where marl coated egg surfaces, but cumulative survival was negligible for all water types. After 53 days, no surviving alevins remained in RU or CA, and 1% survival was observed in OA water. However, extra eggs maintained in a marl-producing system at 8 C without gravel demonstrated >50% survival. A second study was carried out to investigate this discrepancy. Survival was evaluated at three temperatures with and without gravel while producing a thin coating of marl. Increased prevalence of alevin deformities and significantly lower survival were observed at 13.7 C versus 8.1 and 11.2 C, but gravel inclusion did not affect these variables. Potentially harmful effects of marl were observed; however, juvenile brook trout survival was higher during Study 2. This research suggests that brook trout reintroduction efforts in karst-geology streams should be focused on microhabitats with limited marl production and adequate water temperatures for juvenile survival.

Journal of the Southeastern Association of Fish an↗
USGS1995

The ecology of cormorants: some research needs and recommendations

Concerns about Double-crested Cormorants (Phalacrocorax auritus) have arisen because of their rapid population increase across North America and their economic impact on several aquaculture and commercial fish industries. In spite of the concern for cormorants, little published research is available that addresses either basic population biology questions or management issues. Based on a literature review, I recommend that research be conducted in four areas. First, a large-scale banding and marking program should be initiated so that population models can be used to estimate age- and sex-specific survival and fecundity (as has been done for the Shag [P. aristotelis] in Europe). By marking individual birds, survival and movement rates can be estimated between nesting colonies, which will provide information about potential source versus sink colonies. Second, studies of movements during migration and winter are required. Presently, no data are available on habitat use during migration or on the length-of-stay by individual birds. This has important implications to how cormorants interact with other fish and wildlife species over a broad range. Studies of movements during winter with radio-marked birds should indicate whether the 'problem birds' at aquaculture sites are merely a few specialists. Third, limiting factors, such as contaminants and disease, should receive further investigation, especially in light of recent concerns over the outbreak of Newcastle disease. The relationship between contaminant levels and developmental abnormalities in young cormorants in certain areas of the Great Lakes in Canada and the United States remains equivocal. Fourth, further studies are needed to document the economic impacts of cormorants on Channel Catfish (Ictalurus punctatus) and other cultured fishes and to determine ways to reduce predation by fish-eating birds. Mesocosm experiments should be conducted to evaluate how different fish extraction rates affect final productivity of fish. Controlled experiments with different exclusion and scaring devices are needed. With radio-marked birds, it should be determined what the behavioral responses are to the different scaring devises. Also, providing alternative wetland feeding sites in regions of fish farm depredation might alleviate some of the pressure on farmers. Studies with radio-marked birds could evaluate effects of manipulation of 'natural' wetlands on use by birds during the winter period. Finally, any research directed at the Double-crested Cormorant should also evaluate its interactions with other fisheating waterbirds.

Book chapter↗
USGS2012

The Colorado Plateau V: research, environmental planning, and management for collaborative conservation

Roughly centered on the Four Corners region of the southwestern United States, the Colorado Plateau covers some 130,000 square miles of sparsely vegetated plateaus, mesas, canyons, arches, and cliffs in Arizona, Utah, Colorado, and New Mexico. With elevations ranging from 3,000 to 14,000 feet, the natural systems found within the plateau are dramatically varied, from desert to alpine conditions.This volume, the fifth from the University of Arizona Press and the tenth overall, focuses on adaptation of resource management and conservation to climate change and water scarcity, protecting biodiversity through restructured energy policies, ensuring wildlife habitat connectivity across barriers, building effective conservation networks, and exploring new opportunities for education and leadership in conservation science.An informative read for people interested in the conservation and natural history of the region, the book will also serve as a valuable reference for those people engaged in the management of cultural and biological resources of the Colorado Plateau, as well as scientists interested in methods and tools for land and resource management throughout the West.

Book↗
USGS2024

Predicting the spatial distribution of wintering golden eagles to inform full annual cycle conservation in western North America

Wildlife conservation strategies focused on one season or population segment may fail to adequately protect populations, especially when a species’ habitat preferences vary among seasons, age-classes, geographic regions, or other factors. Conservation of golden eagles ( Aquila chrysaetos ) is an example of such a complex scenario, in which the distribution, habitat use, and migratory strategies of this species of conservation concern vary by age-class, reproductive status, region, and season. Nonetheless, research aimed at mapping priority use areas to inform management of golden eagles in western North America has typically focused on territory-holding adults during the breeding period, largely to the exclusion of other seasons and life-history groups. To support population-wide conservation planning across the full annual cycle for golden eagles, we developed a distribution model for individuals in a season not typically evaluated–winter–and in an area of the interior western U.S. that is a high priority for conservation of the species. We used a large GPS-telemetry dataset and library of environmental variables to develop a machine-learning model to predict spatial variation in the relative intensity of use by golden eagles during winter in Wyoming, USA, and surrounding ecoregions. Based on a rigorous series of evaluations including cross-validation, withheld and independent data, our winter-season model accurately predicted spatial variation in intensity of use by multiple age- and life-history groups of eagles not associated with nesting territories (i.e., all age classes of long-distance migrants, and resident non-adults and adult “floaters”, and movements of adult territory holders and their offspring outside their breeding territories). Important predictors in the model were wind and uplift (40.2% contribution), vegetation and landcover (27.9%), topography (14%), climate and weather (9.4%), and ecoregion (8.7%). Predicted areas of high-use winter habitat had relatively low spatial overlap with nesting habitat, suggesting a conservation strategy targeting high-use areas for one season would capture as much as half and as little as one quarter of high-use areas for the other season. The majority of predicted high-use habitat (top 10% quantile) occurred on private lands (55%); lands managed by states and the Bureau of Land Management (BLM) had a lower amount (33%), but higher concentration of high-use habitat than expected for their area (1.5–1.6x). These results will enable those involved in conservation and management of golden eagles in our study region to incorporate spatial prioritization of wintering habitat into their existing regulatory processes, land-use planning tasks, and conservation actions.

PLoS ONE↗
USGS2010

Extended abstracts from the Coastal Habitats in Puget Sound (CHIPS) 2006 Workshop

Puget Sound is the second largest estuary in the United States. Its unique geology, climate, and nutrient-rich waters produce and sustain biologically productive coastal habitats. These same natural characteristics also contribute to a high quality of life that has led to a significant growth in human population and associated development. This population growth, and the accompanying rural and urban development, has played a role in degrading Puget Sound ecosystems, including declines in fish and wildlife populations, water-quality issues, and loss and degradation of coastal habitats. In response to these ecosystem declines and the potential for strategic large-scale preservation and restoration, a coalition of local, State, and Federal agencies, including the private sector, Tribes, and local universities, initiated the Puget Sound Nearshore Ecosystem Restoration Project (PSNERP). The Nearshore Science Team (NST) of PSNERP, along with the U.S. Geological Survey, developed a Science Strategy and Research Plan (Gelfenbaum and others, 2006) to help guide science activities associated with nearshore ecosystem restoration. Implementation of the Research Plan includes a call for State and Federal agencies to direct scientific studies to support PSNERP information needs. In addition, the overall Science Strategy promotes greater communication with decision makers and dissemination of scientific results to the broader scientific community. On November 14–16, 2006, the U.S. Geological Survey sponsored an interdisciplinary Coastal Habitats in Puget Sound (CHIPS) Research Workshop at Fort Worden State Park, Port Townsend, Washington. The main goals of the workshop were to coordinate, integrate, and link research on the nearshore of Puget Sound. Presented research focused on three themes: (1) restoration of large river deltas; (2) recovery of the nearshore ecosystem of the Elwha River; and (3) effects of urbanization on nearshore ecosystems. The more than 35 presentations covered a wide range of ongoing inter-disciplinary research, including studies of sediment geochemistry of aquatic environments, sediment budgets, tracking fish pathways, expansion of invasive forams, beach and nearshore sedimentary environments, using influence diagrams as a decision support tool, forage fish, submarine groundwater, and much, much more. The primary focus within these themes was on developing information on the physical, chemical, and biological processes, as well as the human dimensions, associated with the restoration or rehabilitation of the nearshore environment. The workshop was an excellent opportunity for USGS scientists and collaborators who are working on Puget Sound coastal habitats to present their preliminary findings, discuss upcoming research, and to identify opportunities for interdisciplinary collaboration. A compilation of extended abstracts from workshop participants, this proceedings volume serves as a useful reference for attendees of the workshop and for those unable to attend. Taken together, the abstracts in this report provide a view of the current status of USGS multidisciplinary research on Puget Sound coastal habitats.

Open-File Report↗
USGS2004

Integrated monitoring of hydrogeomorphic, vegetative, and edaphic conditions in riparian ecosystems of Great Basin National Park, Nevada

In semiarid regions such as the Great Basin, riparian areas function as oases of cooler and more stable microclimates, greater relative humidity, greater structural complexity, and a steady flow of water and nutrients relative to upland areas. These qualities make riparian areaʼs attractive not only to resident and migratory wildlife, but also to visitors in recreation areas such as Great Basin National Park in the Snake Range, east-central Nevada. To expand upon the system of ten permanent plots sampled in 1992 (Smith et al. 1994) and 2001 (Beever et al. in press ), we established a collection of 31 cross-sectional transects of 50-m width across the mainstems of Strawberry, Lehman, Baker, and Snake creeks. Our aims in this research were threefold: a) map riparian vegetative communities in greater detail than had been done by past efforts; b) provide a monitoring baseline of hydrogeomorphology; structure, composition, and function of upland- and riparianassociated vegetation; and edaphic properties potentially sensitive to management; and c) test whether instream conditions or physiographic variables predicted vegetation patterns across the four target streams. In each of the four watersheds, we performed walking transects from the lower-elevation boundary of the park along creek mainstems to a point well above the point at which vehicle access stopped. In these transects, we ranked, by cover, the riparian and upland woody species on each side of the creek, in 0.32-km segments. These walking transects also facilitated selection of a suite of cross-sectional transects that might serve as an early-warning signal of change for natural (e.g., aggradative) and anthropogenic changes (e.g., due to visitor impacts or climate change). At each cross-sectional transect, we used several methods: a) measurement of the number, approximate volume, and total length of instream logs greater than 10 cm in diameter that were within 5 m up- or downstream of the transect; b) counts of pebbles by size class, following Wolman (1954); c) line-point intercepts, which provided various measures of percent cover; d) gap-intercept transects, following Herrick et al. (in press), to measure susceptibility of uplands to erosion by wind or water; e) 1-m 2 quadrats, to obtain frequency of woody species; f) nested-frequency plots, to measure frequency of all plant species in quadrats of varying size; g) a field-based soil aggregate stability test following Herrick et al. (2001); and h) an impact penetrometer, to measure penetration resistance of soil horizons. We used species-accumulation curves to assess the ability of our methods to detect the majority of plant species at sites, using the most species-rich and species-poor sites as illustrations. We compared characteristics of hydrogeomorphic valley types (designated by Frissell and Liss 1993), vegetation types, and creeks individually and, using multivariate analyses for the first two ʻtypes,ʼ simultaneously. For the latter, using both the nested-frequency and 1-m 2 frequency data, we first used nonmetric multidimensional scaling (NMS) to assess relationships of plant communities among sites. Secondly, we used multi-response permutation procedures (MRPP) to test whether plant-community differences existed among either hydrogeomophic valley types or vegetation types. To increase the value of these comparisons for management, we used indicator species analyses to quantify the indicator value of each individual plant species for separating groups. In contrast to the more incised riparian channels of central Nevada, we observed knickzones, downcutting, and incision only rarely and usually with limited extent in the walking surveys. Downcutting occurred most frequently and extensively in Strawberry and Snake creeks, due in part to their more erodible soils. According to a hydrogeomorphologist with extensive experience in Great Basin riparian systems, the sediment-delivery and hydrologic systems appeared relatively undisturbed in most reaches, with respect to grazing animals and other types of anthropogenic alteration. Site elevation of the 31 transects ranged from 1,950-2,987 m, and stream slope (i.e., gradient) was relatively steep (mean = 9.3%, range 3-16%). Strawberry Creek averaged the lowest maximum water depth, and correspondingly had greatest width/depth ratios. Baker Creek sites averaged the smallest amount of tree-canopy gaps, whereas Snake Creek sites on average had the largest proportion of gaps in understory vegetation. Sites in terrace-bound valley types averaged the lowest slope in the channel as well as the least cover of trees, litter, and vegetation overall, whereas alluviated, boulder-bed canyon sites averaged the greatest widths of the active channel. Sites in Lehman Creek averaged nearly twice as much coarse woody debris as sites from any other creek, whereas Baker Creek sites averaged greatest tree cover (mean = 67%, range 40 – 96%) and species richness (mean = 17.3 species). Multivariate ordinations suggested that sites in leveed outwash valleys and alluvial-fan-influenced valleys had the greatest inter-site heterogeneity in plant composition, whereas sites in incised moraine-filled valleys appeared most homogeneous. Differences among homogeneity of sites within vegetation types were less pronounced, but sites dominated by either aspen and Woodsʼ rose or narrow-leaved cottonwood had the most similar plant communities among sites of the same vegetation type. A number of species were faithful indicators of various valley and vegetation types, using either set of plant-frequency data. We estimate that all 31 sites could be subsequently re-sampled in 14-18 field days by individuals possessing familiarity of the riparian flora of the southern Snake Range. As with any research, monitoring-focused investigations must balance the concerns for number of ecosystem attributes measured, extensiveness in time and space of sampling periods and locations, and the time and cost of sampling.

Nevada↗
USGS2023

Establishing big sagebrush seedlings on the Colorado Plateau

Factors such as soil type and precipitation vary across rangeland landscapes, and these factors affect restoration outcomes and ultimately mean that “one size fits all” management strategies are not effective across large, complex landscapes. Big sagebrush (Artemisia tridentata) is a foundational rangeland species that is important to wildlife habitat across the western U.S. On the Colorado Plateau, sagebrush is important browse for ungulates, such as mule deer and pronghorn, which motivates a great deal of restoration effort. However, most scientific knowledge of big sagebrush comes from the Great Basin, and we know much less about how to restore sagebrush on the Colorado Plateau, where soils and precipitation patterns are different and conditions are warmer and drier. This fact sheet describes research about establishing and restoring sagebrush seedlings on the Colorado Plateau.

Utah↗