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Vaccination as a potential means to prevent plague in black-footed ferrets: Progress and continuing challenges

This study was conducted to further assess the feasibility of vaccinating black-footed ferrets ( Mustela nigripes ) against plague (caused by the bacterium Yersinia pestis ). On days 0 and 28, 17 postreproductive ferrets were immunized by subcutaneous injection with a recombinant fusion protein containing F1 and V antigens from Y. pestis. Another 17 animals received a placebo by the same route. Two weeks after the second immunization, mean antibody titers to Y. pestis F1 and V antigens were measured and found to be significantly higher in vaccinates than their preimmunization values (P < 0.0001) and significantly higher than the control values (P < 0.0001). Six months postimmunization, 16 vaccinates and eight controls were challenged with approximately 8,000 colony forming units of virulent plague by subcutaneous inoculation. Eleven of 16 vaccinates (69 percent) survived with no ill effects whereas all eight control animals died within 3a??6 days. Two months later, the 11 surviving vaccinates were challenged again by ingestion of a plague-infected mouse. None of the animals showed any ill effects and all survived. In contrast, seven control ferrets fed infected mice died within 2a??4 days, including one animal that did not actually ingest the mouse but was likely exposed to it. This study demonstrates that immunization of ferrets with the recombinant F1-V fusion protein can induce significant antibody responses and reduce their susceptibility to plague infection.

Scientific Investigations Report↗

Progress toward a National Water Census

Increasing demand and competition for limited regional water resources make it difficult to ensure adequate water availability for both human and ecological needs now and into the future. Recognizing the need to improve the tools and information that are available to effectively evaluate water-resource availability, the U.S. Geological Survey (USGS) identified a National Water Census (NWC) as one of its six core science directions for the decade 2007&ndash;17. In 2009, the SECURE Water Act (Public Law 111&ndash;11) authorized the USGS to develop a national water availability and use assessment program that would update the most recent national assessment of the status of water resources in the United States as well as develop the science to improve forecasts of water availability and quality for future needs. By evaluating large-scale effects of changes in land use and land cover, water use, and climate on occurrence and distribution of water, water quality, and human and aquatic-ecosystem health, the NWC will also help to inform a broader initiative by the Department of the Interior, WaterSMART (Sustain and Manage America's Resources for Tomorrow), which provides multiagency funding to pursue a sustainable water supply for the Nation as directed under the SECURE Water Act. Through the NWC, the USGS actively engages Federal, regional, and local stakeholders to identify research priorities and leverages current studies and program activities to provide information that is relevant at both the national and regional scales.

Fact Sheet↗

Passive aerobic treatment of net-alkaline, iron-laden drainage from a flooded underground anthracite mine, Pennsylvania, USA

This report evaluates the results of a continuous 4.5-day laboratory aeration experiment and the first year of passive, aerobic treatment of abandoned mine drainage (AMD) from a typical flooded underground anthracite mine in eastern Pennsylvania, USA. During 1991-2006, the AMD source, locally known as the Otto Discharge, had flows from 20 to 270 L/s (median 92 L/s) and water quality that was consistently suboxic (median 0.9 mg/L O2) and circumneutral (pH ??? 6.0; net alkalinity >10) with moderate concentrations of dissolved iron and manganese and low concentrations of dissolved aluminum (medians of 11, 2.2, and <0.2 mg/L, respectively). In 2001, the laboratory aeration experiment demonstrated rapid oxidation of ferrous iron (Fe 2+) without supplemental alkalinity; the initial Fe2+ concentration of 16.4 mg/L decreased to less than 0.5 mg/L within 24 h; pH values increased rapidly from 5.8 to 7.2, ultimately attaining a steady-state value of 7.5. The increased pH coincided with a rapid decrease in the partial pressure of carbon dioxide (PCO2) from an initial value of 10 -1.1atm to a steady-state value of 10-3.1atm. From these results, a staged aerobic treatment system was conceptualized consisting of a 2 m deep pond with innovative aeration and recirculation to promote rapid oxidation of Fe2+, two 0.3 m deep wetlands to facilitate iron solids removal, and a supplemental oxic limestone drain for dissolved manganese and trace-metal removal. The system was constructed, but without the aeration mechanism, and began operation in June 2005. During the first 12 months of operation, estimated detention times in the treatment system ranged from 9 to 38 h. However, in contrast with 80-100% removal of Fe2+ over similar elapsed times during the laboratory aeration experiment, the treatment system typically removed less than 35% of the influent Fe2+. Although concentrations of dissolved CO2 decreased progressively within the treatment system, the PCO2 values for treated effluent remained elevated (10-2.4 to 10-1.7atm). The elevated PCO 2 maintained the pH within the system at values less than 7 and hence slowed the rate of Fe2+ oxidation compared to the aeration experiment. Kinetic models of Fe2+ oxidation that consider effects of pH and dissolved O2 were incorporated in the geochemical computer program PHREEQC to evaluate the effects of detention time, pH, and other variables on Fe2+ oxidation and removal rates. These models and the laboratory aeration experiment indicate that performance of this and other aerobic wetlands for treatment of net-alkaline AMD could be improved by aggressive, continuous aeration in the initial stage to decrease PCO 2, increase pH, and accelerate Fe2+ oxidation. ?? 2007 Springer-Verlag.

Mine Water and the Environment↗

The 1965 Mississippi River flood in Iowa

The great flood of 1965 on the Mississippi River, along the eastern border if the State, exceeded any flood known in 139 years. It cause damages probably in excess of ten millions of dollars in the State of Iowa. Studied now in progress will more thoroughly cover this and other phases of the flood. The underlying cause of the flood was an abnormally cold winter which prevented the melting of an excessive snow cover in the upper reaches of the basin. Heavy rains late in March followed by rapid melting triggered the runoff which caused the floods. Peak discharges experienced ranged from 276,000 cfs (cubic feet per second) at McGregor near the northern boundary of the State to 327,000 cfs at Keokuk near the southern boundary. Tributary streams in Iowa were receding as the main-stem flood peak passed their mouths. The discharge they contributed was generally insignificant except for the larger streams. Flood data compiled for the part of the River along the eastern border include flood discharges, flood elevations, and the frequency of floods of varying magnitudes. They also include the daily or more frequent stage and discharge data for both the Mississippi River and the downstream gaging stations on Iowa tributaries for the period March-May 1965. Sufficient data are presented to permit studied for preparation of plans for protective works and plans for zoning or for flood plain regulation.

Illinois, Iowa, Wisconsin↗

Major Texas floods of 1935

In localities where highly mineralized water is present in beds above and below the beds that yield the supplies of fresh water it is necessary to be able to locate leaks in wells in order to know whether the wells are being contaminated through holes in the casings or whether the fresh water supply is failing. Four general methods of detecting salt-water leaks have been used. In the pumping method, samples taken at measured time intervals while the well is being pumped show by their progressive change in salinity if salt water is being drawn in. In the velocity method, which is suitable for use only in artesian wells, a current meter lowered into the well indicates the location of possible salt water leaks by determining the levels at which there are changes in the rate of upward movement of the water. In the sampler method a container lowered into the well brings up a sample from any depth desired for analysis of its chloride content. The electric conductivity method, for which special apparatus was designed, has been used successfully in the Winter Garden area and Kleberg County, Tex., and in Sarasota County, Fla. The procedure in this method was to lower a pair of insulated electrodes into the well and measure the resistance of the water between them with the Wheatstone bridge or, in waters low in chloride, to apply a direct current of low voltage and measure the current flowing between .the electrodes by means of a milliammeter. The installments showed a marked increase in the conductivity of the water as the electrodes passed from fresh to salt water in the well, leaving no doubt as to the location of the leaks.

Water Supply Paper↗

Prediction of suspended-sediment concentrations at selected sites in the Fountain Creek watershed, Colorado, 2008-09

In 2008, the U.S. Geological Survey (USGS), in cooperation with Pikes Peak Area Council of Governments, Colorado Water Conservation Board, Colorado Springs City Engineering, and the Lower Arkansas Valley Water Conservancy District, began a small-scale pilot study to evaluate the effectiveness of the use of a computational model of streamflow and suspended-sediment transport for predicting suspended-sediment concentrations and loads in the Fountain Creek watershed in Colorado. Increased erosion and sedimentation damage have been identified by the Fountain Creek Watershed Plan as key problems within the watershed. A recommendation in the Fountain Creek Watershed plan for management of the basin is to establish measurable criteria to determine if progress in reducing erosion and sedimentation damage is being made. The major objective of this study was to test a computational method to predict local suspended-sediment loads at two sites with different geomorphic characteristics in order to evaluate the feasibility of using such an approach to predict local suspended-sediment loads throughout the entire watershed. Detailed topographic surveys, particle-size data, and suspended-sediment samples were collected at two gaged sites: Monument Creek above Woodmen Road at Colorado Springs, Colorado (USGS gage 07103970), and Sand Creek above mouth at Colorado Springs, Colorado (USGS gage 07105600). These data were used to construct three-dimensional computational models of relatively short channel reaches at each site. The streamflow component of these models predicted a spatially distributed field of water-surface elevation, water velocity, and bed shear stress for a range of stream discharges. Using the model predictions, along with measured particle sizes, the sediment-transport component of the model predicted the suspended-sediment concentration throughout the reach of interest. These computed concentrations were used with predicted flow patterns and channel morphology to determine fluxes of suspended sediment for the median particle size and for the measured range of particle sizes in the channel. Three different techniques were investigated for making the suspended-sediment predictions; these techniques have varying degrees of reliance on measured data and also have greatly differing degrees of complexity. Based on these data, the calibrated Rouse method provided the best balance between accuracy and both computational and data collection costs; the presence of substantial washload was the primary factor in eliminating the simpler and the more complex techniques. Based on this work, using the selected technique at additional sites in the watershed to determine relative loads and source areas appears plausible. However, to ensure that the methodology presented in this report yields reasonable results at other selected sites in the basin, it is necessary to collect additional verification data sets at those locations.

Colorado↗

Geochemical controls on dissolved sodium in basalt aquifers of the Columbia Plateau, Washington

Miocene basaltic aquifers of the Columbia Plateau are the principal source of water for agricultural, domestic, and municipal use in Washington State. Irrigation with groundwaters with relatively high sodium concentrations has been cause for concern in recent years, because of the tendency of such waters to reduce soil permeability. Chemical reactions involving groundwater and the basalts are the primary mechanisms responsible for the input of sodium to groundwater in the plateau. This conclusion is supported by the sequence of secondary alteration products found and by progressive changes in groundwater chemistry with depth and position along regional flow paths. Upgradient and shallow groundwaters have low sodium concentrations and sodium-adsorption ratios (SAR's), and are predominantly calcium sodium bicarbonate waters. Groundwaters from deeper and downgradient locations have higher sodium concentrations and SAR 's and are predominantly sodium bicarbonate water. Volcanic glass and cryptocrystalline matrix are the major sources of groundwater sodium, and are dissolved by a combination of silicate hydrolysis and dissolution by carbonic acid. Magnesium, iron, and calcium are removed from solution by the formation of an iron magnesium smectite, calcite , and amorphous iron oxyhydroxide. The addition of sodium, silicon, and potassium by dissolution of basalt exceeds their removal by the precipitation of secondary minerals, and their concentrations increase in the initial stages of this process. In later stages, these continued increases produce a water saturated with clinoptilolite and silica phases, and these begin to precipitate. While the timing of these processes is unclear, the mineralogy of secondary alteration and estimated cooling rates of the basalt flows suggest that observed alteration products formed primarily at low temperature, under conditions similar to those existing at the present time. (USGS)

Water-Resources Investigations Report↗

Dacitic ash-flow sheet near Superior and Globe, Arizona

Remnants of a dacitic ash-flow sheet near Globe, Miama, and Superia, Arizona cover about 100 square miles; before erosion the area covered by the sheet was at least 400 square miles and perhaps as much as 1,500 square miles. Its maximum thickness is about 2,000 feet, its average thickness is about 500 feet, and its original volume was at least 40 cubic miles. It was erupted on an eroded surface with considerable relief. The main part of the deposit was thought by early workers to be a lava flow. Even after the distinctive character of welded tuffs and related rocks was discovered, the nature and origin of this deposit remained dubious because textures did not correspond to those in other welded tuff bodies. Yet a lava flow as silicic as this dacite would be viscous instead of spreading out as an extensive sheet. The purpose of this investigation has been to study the deposit, resolve the inconsistencies, and deduce its origin and history. Five stratigraphic zones are distinguished according to differences in the groundmass. From bottom to top the zones are basal tuff, vitrophyre, brown zone, gray zone, and white zone. The three upper zones are distinguished by colors on fresh surfaces, for each weathers to a similar shade of light reddish brown. Nonwelded basal tuff grades upward into the vitrophyre, which is a highly welded tuff. The brown and gray zones consist of highly welded tuff with a lithoidal groundmass. Degree of welding decreases progressively upward through the gray and the white zones, and the upper white zone is nonwelded. Textures are clearly outlined in the lower part of the brown zone, but upward they become more diffuse because of increasing devitrification. In the white zone, original textures are essentially obliterated, and the groundmass consists of spherulites and microcrystalline intergrowths. The chief groundmass minerals are cristobalite and sanidine, with lesser quartz and plagioclase. Phenocrysts comprise about 40 percent of the rock, and their relative proportions are fairly uniform. Almost three-fourths of the phenocrysts are plagioclase, one-tenth quartz, one-tenth biotite, and the remainder sanidine, magnetite, and hornblende, with accessory sphene, zircon, and appetite. Pumice fragments are nearly equidimensional near the top of the sheet, and downward they become progressively more flattened until they finally disappear. The zones and the pumice fragment flattening ration (ratio of length to height) provide means for recognizing several faults within the sheet. Twelve new chemical analyses are nearly uniform in composition. If named according to chemical composition, the rock would be a quartz latite, but when named according to phenocrysts, it is a dacite. From the field occurrence and the interpretation of relict textures, it is concluded that the deposit is an ash-flow sheet containing large amounts of welded tuff, and that it was emplaced by a type of nuee ardente instead of a lava flow or air-fall shower. The nature of zoning and trend of flattening ratios indicate a series of eruptions in rapid enough succession for the sheet to form a single cooling unit. Except in the lower part of the sheet, original textures were obscured by devitrification and crystallization during cooling. Nearly uniform mineralogy and chemistry suggest a single magnetic source. A nearly circular area, about 3? miles in diameter, of altered dacite and earlier volcanic rocks, bounded by intricately faulted and brecciated older rocks, may be the site of a caldera that represents the source of the eruptions.

Open-File Report↗

Map showing outcrop of the coal-bearing units and land use in the Gulf Coast region

This map is a preliminary compilation of the outcrop geology of the known coal-bearing units in the Gulf Coast Coal region. The map has been compiled for use in the National Coal Resource Assessment Project currently being conducted by the U.S. Geological Survey, and will be updated as the assessment progresses. The purpose of the map is to show the distribution of coal-bearing rocks in the Gulf Coastal Plain Region and to show stratigraphic correlations, transportation network, fossil-fuel burning power plants, and federally managed lands in the region. It is hoped that this map may aid coal exploration and development in the region. Geologic contacts were digitized from paper copies of the maps listed in the reference section below. The primary source of information was the 1:500,000-scale state geology map series, but larger scale maps were use to better define certain areas, notably the Jackson-Claiborne contact in western Kentucky and Tennessee for example (Olive, 1980). Contacts along state boundaries were modified to best-fit information available from the border areas. Note that coal distribution in the mapped units is not uniform. For example, the Jackson Group contains coal in Texas, but in Mississippi is not presently known to contain significant coal deposits. The unit is widespread and in part non-marine and thus of potential future interest. In contrast, the Jackson Group is not shown in Georgia where it is mostly marine and residuum (weathered material) at the surface. Tertiary age coal has also been noted in the Vicksburg Group (Oligocene) of Louisiana and Mississippi, but is not shown on this map. Contacts with mapped surficial units are not always shown. The locations of coal mine permit boundaries are based on information available at the time of publication and were obtained from the Division of Surface Mining and Reclamation, Railroad Commission of Texas, Austin, and the Injection and Mining Division, Department of Natural Resources, Baton Rouge, Louisiana. The correlation of map units and formation names generally follow Galloway and others (1991). We have placed the Paleocene-Eocene boundary in the middle of the Calvert Bluff Formation in Texas based on unpublished pollen biostratigraphy reports (N.O. Fredericksen, unpublished data, 1993; D.J. Nichols, unpublished data, 1996).

Alabama, Arkansas, Georgia, Florida, Kansas, Kentu↗

Making connections for bird conservation: linking states, provinces & territories to important wintering and breeding grounds

To effectively conserve migratory landbirds, we need to be involved in conservation beyond our political borders. This has been a central tenet of Partners in Flight (PIF) since the initiative began in 1990 with a focus on Nearctic-Neotropical migrants. Implementation of this concept has also been fundamental to the success of the North American Waterfowl Management Plan (e.g., NAWMP 2004). Actions by individual states, provinces and territories are key to the success of PIF efforts at the continental scale, and great progress has been made in recent years though various initiatives. Currently, U.S. state Wildlife Action Plans are outlining a vast array of actions to benefit priority species. However, it is also very important to take action in regions that support these same species at the other end of their migratory movements, to ensure effective protection year-round (Rappole et al. 1983, Webster and Marra 2005, Elliott et al. 2005). For instance, conservation action is needed on the wintering grounds for many birds that breed in Canada and the U.S. but spend a large portion of their annual cycle in Mexico, the West Indies, Central and/or South America. In this document we use maps to summarize migratory connections between individual U.S. states, Canadian provinces & territories and the regions that support the same birds at the other end of migration. The maps give a general picture of where birds go, providing a starting point for targeting action. With this information in hand, decision-makers can explore partnerships and mechanism that would help further conservation action outside their bordersa?|

Partners in Flight Technical Series↗

Reconnaissance map of the Cenozoic geology in the Carlin basin area, Elko and Eureka counties, Nevada

The middle Miocene Carlin sedimentary basin encompasses a large area between the Adobe Range to the east, the Piñon Range to the south, the southern Independence Mountains and Marys Mountain to the west, and Swales Mountain to the north. The town of Carlin is in the southern part of the basin. The geologic map includes detailed to more reconnaissance mapping of Cenozoic units in the main part of the basin, including different facies of the middle Miocene Humboldt Formation. The mapping was part of a broader study of the Miocene and younger paleogeographic evolution of the region. Earlier work obtained numerous 40 Ar/ 39 Ar and tephra correlation dates on sedimentary and volcanic units in the basin. The basin connected to the east into the Elko sedimentary basin and to the northwest and northeast into similar smaller basins between present-day mountain ranges. Early sediments, largely fluvial, began to accumulate in the lowlands between the surrounding ranges at about 16.5 Ma. The sediments were derived from Paleozoic sedimentary and middle Tertiary volcanic units in the nearby highlands, and flow patterns indicate a general southward flow towards present-day Pine Valley. The eruption of the Palisade Canyon–Marys Mountain rhyolite flows at the southwest end of the basin at 15.3 Ma blocked the southward flow, and a lake began to form in the basin. As the lake grew in extent, sedimentary units around the fringes of the lake included a mixture of inflowing fluvial sediments mixed with the pyroclastic-fall, ash-rich sediments deposited in the lake. The lake margin expanded, and stratigraphic sections record the progressive transition from fluvial to mixed fluvial and lacustrine, and finally to entirely lacustrine. The volcanic rock dam was breached at about 14.7 Ma, the lake drained, and fluvial sediments blanketed the entire basin for an unknown period of time after that. Sedimentation progressively buried existing highlands and bridged gaps between adjacent basins. For example, the Carlin and Elko basins connected across the southern Adobe Range. Normal faulting produced numerous, mostly north- to north-northeast-striking faults that cut the sedimentary units and surrounding highlands largely after sedimentation ceased. The largest fault formed in the eastern third of the basin and tilted all of the sedimentary units in the western two-thirds of the basin, as well as the eastern part of Marys Mountain, to the east. Some offset took place during sedimentation. Many other normal faults of smaller extent and offset cut the sedimentary units. The integration of streams draining the Elko and Carlin basins began after about 9.8 Ma. The streams, which together comprised the early stages of the Humboldt River, flowed regionally southwestward beyond the Carlin basin. As many as thirteen, downward-stepping strath terraces in the Carlin basin record the progressive downcutting into and removal of the middle Miocene sediments. Gravel deposits form a thin veneer on some of the higher terraces. Clasts in those gravel deposits, as well as the overall terrace pattern, indicate southward drainage towards the Humboldt River. The erosion gradually re-exposed the flanks of the surrounding highlands. A brief pause in downcutting allowed the formation of a small lake in the Hemphillian (late Miocene), represented by lacustrine units northwest of Carlin. The sedimentary rocks of the Carlin basin conceal a large segment of the world-class, late Eocene Carlin gold trend, which extends from the southern Independence Mountains south into the Piñon Range. Sedimentation largely buried the Gold Quarry and Mike gold deposits in the northwestern part of the basin. Later faulting and erosion re-exposed the Gold Quarry deposit, but the Mike deposit remains buried. The basin’s sedimentary units conceal potential Paleozoic host rocks, and the sedimentary facies and post-sedimentation faults shown on the map may help guide interpretations of geophysical and other exploration data in the Carlin basin. The current map publication was supported by the USGS National Cooperative Geologic Mapping Program under STATEMAP award number G19AC00383.

Nevada↗

Geologic map of the Weldona 7.5' quadrangle, Morgan County, Colorado

The Weldona 7.5′ quadrangle is located on the semiarid plains of northeastern Colorado, along the South Platte River corridor where the river has incised into Upper Cretaceous Pierre Shale. The Pierre Shale is largely covered by surficial deposits that formed from alluvial, eolian, and hillslope processes operating in concert with environmental changes from the Pleistocene to the present. The South Platte River, originating high in the Colorado Rocky Mountains, has played a major role in shaping surficial geology in the map area, which is several tens of kilometers downstream from where headwater tributaries join the river. Recurrent glaciation (and deglaciation) of basin headwaters has affected river discharge and sediment supply far downstream, influencing deposition of alluvium and river incision in the Weldona quadrangle. During the Pleistocene the course of the river within the map area shifted progressively southward as it incised, and by late middle Pleistocene the river was south of its present position, cutting and filling deep paleochannels now covered by younger alluvium. The river shifted back to the north during the late Pleistocene. Kiowa and Bijou Creeks are unglaciated tributaries originating in the Colorado Piedmont east of the Front Range that also have played a major role in shaping surficial geology of the map area. Periodically during the late Pleistocene, major flood events on these tributaries deposited large volumes of sediment at their confluences, forming a broad, low-gradient fan of sidestream alluvium that could have occasionally dammed the river for short periods of time. Eolian sand deposits of the Sterling (north of river) and Fort Morgan (south of river) dune fields cover much of the quadrangle and record past episodes of sand mobilization during times of prolonged drought. With the onset of irrigation and damming during historical times, the South Platte River has changed from a broad, shallow, and sandy braided river with highly variable seasonal discharge to a much narrower, deeper river with braided-meandering transition morphology and more uniform discharge.

Colorado↗

Science support for evaluating natural recovery of polychlorinated biphenyl concentrations in fish from Crab Orchard Lake, Crab Orchard National Wildlife Refuge, Illinois

Introduction Crab Orchard Lake in southern Illinois is one of the largest and most popular recreational lakes in the state. Construction of the nearly 7,000-acre reservoir in the late 1930s created employment opportunities through the Works Progress Administration, and the lake itself was intended to supply water, control flooding, and provide recreational opportunities for local communities (Stall, 1954). In 1942, the Department of War appropriated or purchased more than 20,000 acres of land around Crab Orchard Lake and constructed the Illinois Ordnance Plant, which manufactured bombs and anti-tank mines during World War II. After the war, an Act of Congress transferred the property to the U.S. Department of the Interior. Crab Orchard National Wildlife Refuge was established on August 5, 1947, for the joint purposes of wildlife conservation, agriculture, recreation, and industry. Production of explosives continued, but new industries also moved onsite. More than 200 tenants have held leases with Crab Orchard National Wildlife Refuge and have operated a variety of manufacturing plants (electrical components, plated metal parts, ink, machined parts, painted products, and boats) on-site. Soils, water, and sediments in several areas of the refuge were contaminated with hazardous substances from handling and disposal methods that are no longer acceptable environmental practice (for example, direct discharge to surface water, use of unlined landfills). Polychlorinated biphenyl (PCB) contamination at the refuge was identified in the 1970s, and a PCB-based fish-consumption advisory has been in effect since 1988 for Crab Orchard Lake. The present advisory covers common carp ( Cyprinus carpio ) and channel catfish ( Ictalurus punctatus ); see Illinois Department of Public Health (2017). Some of the most contaminated areas of the refuge were actively remediated, and natural ecosystem recovery processes are expected to further reduce residual PCB concentrations in the lake. The U.S. Fish and Wildlife Service sought technical support to understand environmental drivers of current (2017) PCB residues in fish tissue and patterns in PCB residues through time to inform the fish-consumption advisory for Crab Orchard Lake. This project is planned in two phases (Tasks 1 and 2); the first phase is included in this report. Task 1, reported here, includes a review of existing literature and a brief overview focused on environmental and biochemical/physiological processes that drive PCB residues in fish tissue. This review specifically targets processes that are relevant for freshwater lacustrine environments such as those at Crab Orchard Lake. In addition to discussions of environmental fate, metabolism, and accumulation of PCBs, this review includes a brief scientifically based explanation of approaches used to establish fish-consumption advisories. A planned second task (Task 2) will include a compilation and summary of existing data on PCB residues in fish tissue samples from Crab Orchard Lake. This summary will also place Crab Orchard Lake data in a broader geographic context through a comparison with fish data from other Midwestern lakes. When Task 1 and Task 2 are complete, resource managers will have (a) a synthesis of existing literature that characterizes the processes influencing the fate of residual PCBs remaining in systems such as Crab Orchard Lake, (b) a summary of natural PCB attenuation processes for use in risk communication with the public, and (c) a summary of existing data on PCBs in fish tissues from Crab Orchard Lake, including exploratory plots of tissue residues through time. Overall, this project will provide data to help resource managers better understand the ecological and public health consequences of residual PCBs in Crab Orchard Lake.

Illinois↗

Columbia River Estuary ecosystem classification—Concept and application

This document describes the concept, organization, and application of a hierarchical ecosystem classification that integrates saline and tidal freshwater reaches of estuaries in order to characterize the ecosystems of large flood plain rivers that are strongly influenced by riverine and estuarine hydrology. We illustrate the classification by applying it to the Columbia River estuary (Oregon-Washington, USA), a system that extends about 233 river kilometers (rkm) inland from the Pacific Ocean. More than three-quarters of this length is tidal freshwater. The Columbia River Estuary Ecosystem Classification ("Classification") is based on six hierarchical levels, progressing from the coarsest, regional scale to the finest, localized scale: (1) Ecosystem Province; (2) Ecoregion; (3) Hydrogeomorphic Reach; (4) Ecosystem Complex; (5) Geomorphic Catena; and (6) Primary Cover Class. We define and map Levels 1-3 for the entire Columbia River estuary with existing geospatial datasets, and provide examples of Levels 4-6 for one hydrogeomorphic reach. In particular, three levels of the Classification capture the scales and categories of ecosystem structure and processes that are most tractable to estuarine research, monitoring, and management. These three levels are the (1) eight hydrogeomorphic reaches that embody the formative geologic and tectonic processes that created the existing estuarine landscape and encompass the influence of the resulting physiography on interactions between fluvial and tidal hydrology and geomorphology across 230 kilometers (km) of estuary, (2) more than 15 ecosystem complexes composed of broad landforms created predominantly by geologic processes during the Holocene, and (3) more than 25 geomorphic catenae embedded within ecosystem complexes that represent distinct geomorphic landforms, structures, ecosystems, and habitats, and components of the estuarine landscape most likely to change over short time periods.

Columbia River Estuary↗

Progress on geoenvironmental models for selected mineral deposit types

Since the beginning of economic geology as a subdiscipline of the geological sciences, economic geologists have tended to classify mineral deposits on the basis of geological, mineralogical, and geochemical criteria, in efforts to systematize our understanding of mineral deposits as an aid to exploration. These efforts have led to classifications based on commodity, geologic setting (Cox and Singer, 1986), inferred temperatures and pressures of ore formation (Lindgren, 1933), and genetic setting (Park and MacDiarmid, 1975; Jensen and Bateman, 1979). None of these classification schemes is mutually exclusive; instead, there is considerable overlap among all of these classifications. A natural outcome of efforts to classify mineral deposits is the development of &ldquo;mineral deposit models.&rdquo; A mineral deposit model is a systematically arranged body of information that describes some or all of the essential characteristics of a selected group of mineral deposits; it presents a concept within which essential attributes may be distinguished and from which extraneous, coincidental features may be recognized and excluded (Barton, 1993). Barton (1993) noted that the grouping of deposits on the basis of common characteristics forms the basis for a classification, but the specification of the characteristics required for belonging to the group is the basis for a model. Models range from purely descriptive to genetic. A genetic model is superior to a descriptive model because it provides a basis to distinguish essential from extraneous attributes, and it has flexibility to accommodate variability in sources, processes, and local controls. In general, a descriptive model is a necessary prerequisite to a genetic model.

Open-File Report↗

The Steens Mountain (Oregon) geomagnetic polarity transition, 2. Field intensity variations and discussion of reversal models

We carried out an extensive paleointensity study of the 15.5±0.3 m.y. Miocene reversed‐to‐normal polarity transition recorded in lava flows from Steens Mountain (south central Oregon). One hundred eighty‐five samples from the collection whose paleodirectional study is reported by Mankinen et al. (this issue) were chosen for paleointensity investigations because of their low viscosity index, high Curie point and reversibility, or near reversibility, of the strong field magnetization curve versus temperature. Application of the Thellier stepwise double heating method was very successful, yielding 157 usable paleointensity estimates corresponding to 73 distinct lava flows. After grouping successive lava flows that did not differ significantly in direction and intensity, we obtained 51 distinguishable, complete field vectors of which 10 are reversed, 28 are transitional, and 13 are normal. The record is complex, quite unlike that predicted by simple flooding or standing nondipole field models. It begins with an estimated several thousand years of reversed polarity with an average intensity of 31.5±8.5 μT, about one third lower than the expected Miocene intensity. This difference is interpreted as a long‐term reduction of the dipole moment prior to the reversal. When site directions and intensities are considered, truly transitional directions and intensities appear almost at the same time at the beginning of the transition, and they disappear simultaneously at the end of the reversal. Large deviations in declination occur during this approximately 4500±1000 year transition period that are compatible with roughly similar average magnitudes of zonal and nonzonal field components at the site. The transitional intensity is generally low, with an average of 10.9±4.9 μT for directions more than 45° away from the dipole field and a minimum of about 5 μT. The root‐mean‐square of the three field components X , Y , and Z are of the same order of magnitude for the transitional field and the historical nondipole field at the site latitude. However, a field intensity increase to pretransitional values occurs when the field temporarily reaches normal directions, which suggests that dipolar structure could have been briefly regenerated during the transition in an aborted attempt to reestablish a stationary field. Changes in the field vector are progressive but jerky, with at least two, and possibly three, large swings at astonishingly high rates. Each of those transitional geomagnetic impulses occurs when the field intensity is low (less than 10 μT) and is followed by an interval of directional stasis during which the magnitude of the field increases greatly. For the best documented geomagnetic impulse the rapid directional change corresponds to a vectorial intensity change of 6700±2700 nT yr −1 , which is about 15–50 times larger than the maximum rate of change of the nondipole field observed during the last centuries. The occurrence of geomagnetic impulses seems to support reversal models assuming an increase in the level of turbulence within the liquid core during transitions. The record closes with an estimated several thousand years of normal polarity with an average intensity of 46.7±20.1 μT, agreeing with the expected Miocene value. However, the occurrence of rather large and apparently rapid intensity fluctuations accompanied by little change in direction suggests that the newly reestablished dipole was still somewhat unstable.

Journal of Geophysical Research B: Solid Earth↗

The Mid-Cretaceous Frontier Formation near the Moxa Arch, southwestern Wyoming

The Frontier Formation in the Green River Basin of Wyoming, Utah, and Colorado, consists of sandstone, siltstone, and shale, and minor conglomerate, coal, and bentonite. These strata were deposited in several marine and nonmarine environments during early Late Cretaceous time. At north-trending outcrops along the eastern edge of the overthrust belt, the Frontier is of Cenomanian, Turonian, and early Coniacian age, and commonly is about 610 m (2,000 ft) thick. The formation in that area conformably overlies the Lower Cretaceous Aspen Shale and is divided into the following members, in ascending order: Chalk Creek, Coalville, Allen Hollow, Oyster Ridge Sandstone, and Dry Hollow. In west-trending outcrops on the northern flank of the Uinta Mountains in Utah, the Frontier is middle and late Turonian, and is about 60 m (200 ft) thick. These strata disconformably overlie the Lower Cretaceous Mowry Shale. In boreholes on the Moxa arch, the upper part of the Frontier is of middle Turonian to early Coniacian age and unconformably overlies the lower part of the formation, which is early Cenomanian at the south end and probably Cenomanian to early Turonian at the north end. The Frontier on the arch thickens northward from less than 100 m (328 ft) to more than 300 m (984 ft) and conformably overlies the Mowry. The marine and nonmarine Frontier near the Uinta Mountains, marine and mnmarine beds in the upper part of the formation on the Moxa arch and the largely nonmarine Dry Hollow Member at the top of the Frontier in the overthrust belt are similar in age. Older strata in the formation, which are represented by the disconformable basal contact of the Frontier near the Uinta Mountains, thicken northward along the Moxa arch and westward between the arch and the overthrust belt. The large changes in thickness of the Frontier in the Green River Basin were caused mainly by differential uplift and truncation of the lower part of the formation during the early to middle Turonian and by the shoreward addition of progressively younger sandstone units at the top of the formation during the late Turonian and early Coniacian. The sandstone in cores of the Frontier, from boreholes on the Moxa arch and the northern plunge of the Rock Springs uplift, consists of very fine grained and fine-grained litharenites and sublitharenites that were deposited in deltaic and shallow-water marine environments. These rocks consist mainly of quartz, chert, rock fragments, mixed-layer illite-smectite, mica-illite, and chlorite. Samples of the sandstone have porosities of 4.7 to 23.0 percent and permeabilities of 0.14 to 6.80 millidarcies, and seem to represent poor to fair reservoir beds for oil and gas. The shale in cores of the Frontier Formation and the overlying basal Hilliard Shale, from the Moxa arch, Rock Springs uplift, and overthrust belt, was deposited in deltaic and offshore-marine environments. Samples of the shale are composed largely of quartz, micaillite, mixed-layer illite-smectite, kaolin, and chlorite. They also contain from 0.27 to 4.42 percent organic carbon, in humic and sapropelic organic matter. Most of the sampled shale units are thermally mature, in terms of oil generation, and a few probably are source rocks for oil and gas.

Professional Paper↗

Mineral Deposit Data for Epigenetic Base- and Precious-metal and Uranium-thorium Deposits in South-central and Southwestern Montana and Southern and Central Idaho

Metal deposits spatially associated with the Cretaceous Boulder and Idaho batholiths of southwestern Montana and southern and central Idaho have been exploited since the early 1860s. Au was first discovered in placer deposits; exploitation of vein deposits in bedrock soon followed. In 1865, high-grade Ag vein deposits were discovered and remained economically important until the 1890s. Early high-grade deposits of Au, Ag and Pb were found in the weathered portions of the veins systems. As mining progressed to deeper levels, Ag and Pb grades diminished. Exploration for and development of these vein deposits in this area have continued until the present. A majority of these base- and precious-metal vein deposits are classified as polymetallic veins (PMV) and polymetallic carbonate-replacement (PMR) deposits in this compilation. Porphyry Cu and Mo, epithermal (Au, Ag, Hg and Sb), base- and precious-metal and W skarn, W vein, and U and Th vein deposits are also common in this area. The world-class Butte Cu porphyry and the Butte high-sulfidation Cu vein deposits are in this study area. PMV and PMR deposits are the most numerous in the region and constitute about 85% of the deposit records compiled. Several types of syngenetic/diagenetic sulfide mineral deposits in rocks of the Belt Supergroup or their equivalents are common in the region and they have been the source of a substantial metal production over the last century. These syngenetic deposits and their metamorphosed/structurally remobilized equivalents were not included in this database; therefore, deposits in the Idaho portion of the Coeur d'Alene district and the Idaho Cobalt belt, for example, have not been included because many of them are believed to be of this type.

Open-File Report↗