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At least 1,387 records · Page 77Linked to original sources
USGS2024

Development of a large-volume concentration method to recover infectious avian influenza virus from the aquatic environment

Since late 2021, outbreaks of highly pathogenic avian influenza virus have caused a record number of mortalities in wild birds, domestic poultry, and mammals in North America. Wetlands are plausible environmental reservoirs of avian influenza virus; however, the transmission and persistence of the virus in the aquatic environment are poorly understood. To explore environmental contamination with the avian influenza virus, a large-volume concentration method for detecting infectious avian influenza virus in waterbodies was developed. A variety of filtering, elution, and concentration methods were explored, in addition to testing filtering speeds using artificially amended 20 L water matrices (deionized water with sterile dust, autoclaved wetland water, and wetland water). The optimal protocol was dead-end ultrafiltration coupled with salt solution elution and centrifugation concentration. Using this method, infectious virus was recovered at 1 × 10 −1 50% egg infectious dose per milliliter (EID 50 /mL), whereas viral RNA was detected inconsistently down to 1 × 10 0 EID 50 /mL. This method will aid in furthering our understanding of the avian influenza virus in the environment and may be applicable to the environmental detection of other enveloped viruses.

Ohio↗
USGS2019

Wetland biomass and productivity in Coastal Louisiana: Base line data (1976-2015) and knowledge gaps for the development of spatially explicit models for ecosystem restoration and rehabilitation initiatives

Coastal Louisiana host 37% of the coastal wetland area in the conterminous US, including one of the deltaic coastal regions more susceptible to the synergy of human and natural impacts causing wetland loss. As a result of the construction of flood protection infrastructure, dredging of channels across wetlands for oil/gas exploration and maritime transport activities, coastal Coastal Louisiana hosts 37% of the coastal wetland area in the conterminous US, including one of the deltaic coastal regions more susceptible to the synergy of human and natural impacts causing wetland loss. As a result of the construction of flood protection infrastructure, dredging of channels across wetlands for oil/gas exploration and maritime transport activities, coastal Louisiana has lost approximately 4900 km2 of wetland area since the early 1930s. Despite the economic relevance of both wetland biomass and net primary productivity (NPP) as ecosystem services, there is a lack of vegetation simulation models to forecast the trends of those functional attributes at the landscape level as hydrological restoration projects are implemented. Here, we review the availability of peer-reviewed biomass and NPP wetland data (below and aboveground) published during the period 1976–2015 for use in the development, calibration and validation of high spatial resolution (<200 m × 200 m) vegetation process-based ecological models. We discuss and list the knowledge gaps for those species that represent vegetation community associations of ecological importance, including the long-term research issues associated to limited number of paired belowground biomass and productivity studies across hydrological basins currently undergoing different freshwater diversions management regimes and hydrological restoration priorities.

Louisiana↗
USGS2024

Spatial differences in soil nutrients along a hydrographic gradient on floodplains in Dongting Lake

The spatial heterogeneity of soil nutrients is crucial for the water bird and whole floodplain wetland ecosystem in large lakes, and it is influenced by the dramatic water level changes and sedimentation progress in West Dongting Lake (WDL). Soil samples were collected at various soil depths along the Yuan River and Li River that feed into WDL. The concentrations of soil total organic carbon (TOC), total nitrogen (TN), total phosphorus (TP), and soil grain size were tested. The stoichiometric ratios of C, N, P, and the mean value of soil grain size ( Mz ) were calculated. The differences of soil TOC, TN, TP and the stoichiometric ratio at different sites and soil depths were compared. Linear regression was used to explore the relationships of Mz and nutrient concentrations, and relationships between TOC, TN, and TP. Redundancy analysis was used to explore the relationship between soil nutrients, heavy metal concentrations, and plant community diversity. The results showed that the distributions of soil TOC, TN, and TP concentrations differed across regions in west Dongting Lake along the Yuan and Li Rivers. Total organic carbon concentration differed at different sedimentation depths. Soil grain size showed negative effect with soil TOC, TN, and TP concentrations in this region. Plant community diversity correlated positively with soil TOC and negatively with Hg. West Dongting Lake was N limited despite the high wet deposition of N. It could potentially be attributed to the insufficient presence of aerobic environments for microbes during intermittent flooding of the floodplain, coupled with feeble mineralization. This study can provide valuable insights for the conservation of water bird habitats and wetland ecosystems.

West Dongting Lake↗
USGS2019

Interactive mapping of nonindigenous species in the Laurentian Great Lakes

Nonindigenous species pose significant risks to the health and integrity of ecosystems around the world. Tracking and communicating the spread of these species has been of interest to ecologists and environmental managers for many years, particularly in the bi-national Laurentian Great Lakes of North America. In this paper, we introduce the Great Lakes Aquatic Nonindigenous Species Information System (GLANSIS) Map Explorer. The Map Explorer provides access to records of documented nonindigenous species and their spatial distributions. Users may view the distributions of well-known nonindigenous species (such as zebra mussels) as well as perform custom queries. Additional map layers allow users to compare the distribution of nonindigenous species to environmental conditions. This tool serves to communicate knowledge to diverse stakeholder groups and to enable further in-depth research on nonindigenous species.

Laurentian Great Lakes↗
USGS2025

Assessing risk for enhanced cyanobacteria, phytoplankton, and pathogens with changes in water level regime with potential application to Lake Powell and Lake Mead: A mixed methods literature review

Water levels in freshwater reservoirs worldwide are changing due to altered climate, management practices, and increasing human demand for water. In the desert southwestern USA, managers are considering significant changes to reservoir operation strategies and water management in response to consumptive use and ongoing drought. To inform reservoir management decision-making, we reviewed current peer-reviewed literature to identify the effects of decreasing or increasing water level on phytoplankton, cyanobacteria, Escherichia coli , and Naegleria spp. We identified 34 studies containing 42 individual waterbodies that investigated the effects of water level increases or decreases on phytoplankton or cyanobacteria. We found that water level decreases resulted in a higher likelihood of increased cyanobacteria, and that phytoplankton were more likely to decrease in response to water level increases. Most of the waterbodies included in the literature review were eutrophic or hypereutrophic, underscoring the need to explore the effects of water level fluctuations on oligotrophic systems. We only identified five studies on E. coli through our review, and no studies on Naegleria spp. We supplemented our review with regional white papers and case studies within the Colorado River Basin and the Rio Grande River Basin to highlight relevant research. Prior and ongoing research highlights the need to explore impacts of water level fluctuations on phytoplankton and cyanobacteria to guide future management decision-making.

Arizona, Utah, Nevada↗
USGS2021

Summary of the final report from the Ice and Climate Evolution Science Analysis group (ICE-SAG)

The Ice and Climate Evolution Science Analysis Group (ICE-SAG) was convened by the Mars Exploration Program Analysis Group (MEPAG) in fall 2018, with the aims of (1) identifying and prioritizing fundamental science questions related to the recent and ongoing evolution of Mars volatiles and climate, and (2) exploring new mission approaches that could address these high-priority science questions during the coming decade (2023–2032). In this white paper, we summarize the ICE-SAG final report via a selection of report materials and provide broad context for the content of this MEPAG-generated report (which is likely a reference mentioned within a number of other, community-based white papers).

Bulletin of the AAS↗
USGS2025

VIPER site analysis

We needed to evaluate available orbital data of NASA’s Volatiles Investigating Polar Exploration Rover (VIPER) mission area in order to derive a variety of maps to help the science team identify scientifically interesting places for the rover to visit and to provide scientific context for our mission. Some of these maps also fulfilled engineering and mission design needs to enable safe and efficient landing and roving. We incorporated data from the Lunar Reconnaissance Orbiter Camera, the Lunar Orbital Laser Altimeter, the Mini-RF instrument, the Chandrayaan-2 Orbital High Resolution Camera, the Korean Pathfinder Lunar Orbiter’s Shadowcam, the Kaguya Spectral Profiler and Multiband Imager, and the Chandrayaan-1 Moon Mineralogy Mapper. We used a variety of techniques to build these maps, including stereogrammetry, shape-from-shading, ice stability depth and surface temperature calculations, and the horizon method for solar illumination and direct-to-Earth communications maps. Altogether, these maps allowed us to survey for boulders, evaluate features in permanently shadowed regions that VIPER might explore, provide mineralogic context for what VIPER’s instruments may learn, estimate the ages and radar properties of craters in the VIPER mission area, and evaluate the potential for gravity traverses with the rover. These data and techniques provided a rich set of information from which both the VIPER science team and engineering teams were able to draw in order to plan a safe landing and to plan a VIPER surface mission that will be both scientifically valuable and robust from an operational perspective.

The Planetary Science Journal↗
USGS2026

Morphometric properties of the CP-21 landing site on the Moon at Mons Gruithuisen Gamma

Characterizing terrain surface properties is an essential step in assessing the feasibility of landing successfully at a location on a planetary surface. Slopes and terrain ruggedness index (TRI) values derived from high-resolution (2 m pixel −1 ) digital terrain models provided important constraints in selecting the landing site for the upcoming Payloads and Research Investigations on the Surface of the Moon program as part of the Commercial Lunar Payload Services task order CP-21 mission. The selected landing site needed to balance safety requirements with the ability to achieve the science and exploration goals of the Lunar Vulkan Imaging and Spectroscopy Explorer payload. In this study, we compare several morphometric parameters in the context of the CP-21 landing site on Mons Gruithuisen Gamma, or the Gamma dome, and quantify the information they convey about lunar surface properties to assess their utility for future landing site evaluation. TRI was found to be a useful metric for assessing landing site safety. Metrics that better decouple slope and surface roughness, the vector ruggedness measure and the standard deviation of slope, provided additional information about surface characteristics and textures such as the degree to which roughness is isotropic.

Planetary Science Journal↗
USGS2026

Thermal detectability of subsurface water ice on Mars: A comparative analysis for the Subsurface Water Ice Mapping (SWIM) Project

We have developed a new global map of shallow ground ice distribution, SWIM23, based on Mars Global Surveyor Thermal Emission Spectrometer data and made systematic comparisons between this new map and two similar, previously developed data products. We have explored the origin of differences between the three ice maps by detailing technical and procedural differences in their development, by making global pixel-by-pixel comparisons, and by carrying out a series of one-dimensional thermal simulations to explore fundamental physical limitations of thermal ice-detection techniques. These efforts and the production of a composite thermal ice-consistency map supported integration of multiple geophysical data products relevant to ice detection in the upper meter of the Martian regolith into the larger Mars Subsurface Water Ice Mapping project. Our work also highlights fundamental physical limitations to thermal ice detection as a technique, particularly the rapid fall-off in ice detection sensitivity at depths >30 cm, which produces maximum uncertainty in the presence and depth of ice within regions preferred for potential human landing sites. A future Mars orbiter mission designed to detect ice and support crewed landing site selection in the midlatitude region should give payload priority to an instrument capable of probing the 1–5 m depth range (i.e., a high-frequency radar), over a next-generation thermal spectrometer, which is unlikely to offer clarity on ice table depths or lateral continuity of the ice table in the locations of highest interest.

Planetary Science Journal↗
USGS2026

Lunar-VISE landing site selection and characterization at Mons Gruithuisen Gamma

The Lunar Vulkan Imaging and Spectroscopy Explorer (Lunar-VISE) was selected for a Commercial Lunar Payload Services (CLPS) delivery to the Gruithuisen domes region of the Moon as part of NASA’s Payloads and Research Investigation on the Surface of the Moon (PRISM) program. The Gruithuisen domes are chemically and morphologically distinct from their surroundings with a thorium-rich, silicic composition. The Lunar-VISE instrument payload is designed to investigate the compositional and thermophysical properties of dome materials in order to understand how late-stage silicic volcanism occurred on the Moon. Selection of a landing site required balancing science and exploration goals with the safety requirements for landing and rover trafficability. Science required access to boulders, potential exposures of bedrock, and if possible, rover access to the dome edge to enable observations of the surrounding maria. Safety considerations included landing hazards, maintenance of line-of-sight communications between the lander and rover, and any early morning or late afternoon shadows that would limit the mission duration. After consideration of several candidate landing sites, a 100-meter diameter landing ellipse centered on 36.45715° N, 319.20398° E, was selected near the edge of a topographic step and blocky ejecta crater (recently named Mareta) near the summit of Mons Gruithuisen Gamma. This location enables access to a field of boulders excavated by a relatively fresh impact providing a diversity of boulders for investigations, as well as views to the surrounding mare and Mons Gruithuisen Delta dome off of the dome edge via only a short rover traverse outside the landing ellipse (traverse < 100 m) while meeting safety requirements in accord with the CLPS risk posture.

Planetary Science Journal↗
USGS2026

Subsurface water ice mapping on Mars: A probabilistic approach

Subsurface water ice deposits on Mars are an important resource for potential future human exploration. They are also an indicator of the planet’s past climate. However, the distribution of subsurface water ice in Mars’s midlatitudes is uncertain because spacecraft imagery cannot directly observe subsurface ice in most cases. Various spacecraft remote sensing instruments are sensitive to subsurface water ice, including thermal imaging spectrometers, radar sounders, and neutron spectrometers. Geomorphic analyses of images can also implicate subsurface ice. Building upon the data products from the Mars Subsurface Water Ice Mapping project, we provide a probabilistic framework to jointly interpret existing data and estimate the likelihood of subsurface water ice in the Martian midlatitudes between 60 ∘ S and 60 ∘ N with uncertainty. Broadly, we find that near-surface ice is likely present poleward of ∼45 ∘ in both the northern and southern hemispheres. However, closer to the equator, existing remote sensing data cannot uniquely constrain the presence of subsurface water ice. Our probabilistic results provide a framework for quantifying the abundance of ice on Mars, and our uncertainty estimates allow future analysis and exploration to target regions of high uncertainty.

Planetary Science Journal↗
USGS2017

Evaluating simplistic methods to understand current distributions and forecast distribution changes under climate change scenarios: An example with coypu ( Myocastor coypus )

Invasive species provide a unique opportunity to evaluate factors controlling biogeographic distributions; we can consider introduction success as an experiment testing suitability of environmental conditions. Predicting potential distributions of spreading species is not easy, and forecasting potential distributions with changing climate is even more difficult. Using the globally invasive coypu ( Myocastor coypus [Molina, 1782]), we evaluate and compare the utility of a simplistic ecophysiological based model and a correlative model to predict current and future distribution. The ecophysiological model was based on winter temperature relationships with nutria survival. We developed correlative statistical models using the Software for Assisted Habitat Modeling and biologically relevant climate data with a global extent. We applied the ecophysiological based model to several global circulation model ( GCM ) predictions for mid-century. We used global coypu introduction data to evaluate these models and to explore a hypothesized physiological limitation, finding general agreement with known coypu distribution locally and globally and support for an upper thermal tolerance threshold. Global circulation model based model results showed variability in coypu predicted distribution among GCMs , but had general agreement of increasing suitable area in the USA. Our methods highlighted the dynamic nature of the edges of the coypu distribution due to climate non-equilibrium, and uncertainty associated with forecasting future distributions. Areas deemed suitable habitat, especially those on the edge of the current known range, could be used for early detection of the spread of coypu populations for management purposes. Combining approaches can be beneficial to predicting potential distributions of invasive species now and in the future and in exploring hypotheses of factors controlling distributions.

NeoBiota↗
USGS2015

Combining state-and-transition simulations and species distribution models to anticipate the effects of climate change

State-and-transition simulation models (STSMs) are known for their ability to explore the combined effects of multiple disturbances, ecological dynamics, and management actions on vegetation. However, integrating the additional impacts of climate change into STSMs remains a challenge. We address this challenge by combining an STSM with species distribution modeling (SDM). SDMs estimate the probability of occurrence of a given species based on observed presence and absence locations as well as environmental and climatic covariates. Thus, in order to account for changes in habitat suitability due to climate change, we used SDM to generate continuous surfaces of species occurrence probabilities. These data were imported into ST-Sim, an STSM platform, where they dictated the probability of each cell transitioning between alternate potential vegetation types at each time step. The STSM was parameterized to capture additional processes of vegetation growth and disturbance that are relevant to a keystone species in the Greater Yellowstone Ecosystem—whitebark pine ( Pinus albicaulis ). We compared historical model runs against historical observations of whitebark pine and a key disturbance agent (mountain pine beetle, Dendroctonus ponderosae ), and then projected the simulation into the future. Using this combination of correlative and stochastic simulation models, we were able to reproduce historical observations and identify key data gaps. Results indicated that SDMs and STSMs are complementary tools, and combining them is an effective way to account for the anticipated impacts of climate change, biotic interactions, and disturbances, while also allowing for the exploration of management options.

AIMS Environmental Science↗
USGS2014

Reservoir controls on the occurrence and production of gas hydrates in nature

Gas hydrates in both arctic permafrost regions and deep marine settings can occur at high concentrations in sand-dominated reservoirs, which have been the focus of gas hydrate exploration and production studies in northern Alaska and Canada, and offshore in the Gulf of Mexico, off the southeastern coast of Japan, in the Ulleung Basin off the east coast of the Korean Peninsula, and along the eastern margin of India. Production testing and modeling has shown that concentrated gas hydrate occurrences in sand reservoirs are conducive to existing well-based production technologies. The resource potential of gas hydrate accumulations in sand-dominated reservoirs have been assessed for several polar terrestrial basins. In 1995, the U.S. Geological Survey (USGS) assigned an in-place resource of 16.7 trillion cubic meters of gas for hydrates in sand-dominated reservoirs on the Alaska North Slope. In a more recent assessment, the USGS indicated that there are about 2.42 trillion cubic meters of technically recoverable gas resources within concentrated, sand-dominated, gas hydrate accumulations in northern Alaska. Estimates of the amount of in-place gas in the sand dominated gas hydrate accumulations of the Mackenzie Delta Beaufort Sea region of the Canadian arctic range from 1.0 to 10 trillion cubic meters of gas. Another prospective gas hydrate resources are those of moderate-to-high concentrations within sandstone reservoirs in marine environments. In 2008, the Bureau of Ocean Energy Management estimated that the Gulf of Mexico contains about 190 trillion cubic meters of gas in highly concentrated hydrate accumulations within sand reservoirs. In 2008, the Japan Oil, Gas and Metals National Corporation reported on a resource assessment of gas hydrates in which they estimated that the volume of gas within the hydrates of the eastern Nankai Trough at about 1.1 trillion cubic meters, with about half concentrated in sand reservoirs. Because conventional production technologies favor sand-dominated gas hydrate reservoirs, sand reservoirs are considered to be the most viable economic target for gas hydrate production and will be the prime focus of most future gas hydrate exploration and development projects.

Book↗
USGS2022

Potential for critical mineral deposits in Maine, USA

An analysis of the potential for deposits of critical minerals and elements in Maine presented here includes data and discussions for antimony, beryllium, cesium, chromium, cobalt, graphite, lithium, manganese, niobium, platinum group elements, rhenium, rare earth elements, tin, tantalum, tellurium, titanium, uranium, vanadium, tungsten, and zirconium. Deposits are divided into two groups based on geological settings and common ore-deposit terminology. One group consists of known deposits (sediment-hosted manganese, volcanogenic massive sulphide, porphyry copper-molybdenum, mafic- and ultramafic-hosted nickel-copper [-cobalt-platinum group elements], pegmatitic lithium-cesium-tantalum) that are in most cases relatively large, well-documented, and have been explored extensively in the past. The second, and much larger group of different minerals and elements, comprises small deposits, prospects, and occurrences that are minimally explored or unexplored. The qualitative assessment used in this study relies on three key criteria: (1) the presence of known deposits, prospects, or mineral occurrences; (2) favourable geologic settings for having certain deposit types based on current ore deposit models; and (3) geochemical anomalies in rocks or stream sediments, including panned concentrates. Among 20 different deposit types considered herein, a high resource potential is assigned only to three: (1) sediment-hosted manganese, (2) mafic- and ultramafic-hosted nickel-copper(-cobalt-platinum group elements), and (3) pegmatitic lithium-cesium-tantalum. Moderate potential is assigned to 11 other deposit types, including: (1) porphyry copper-molybdenum (-rhenium, selenium, tellurium, bismuth, platinum group elements); (2) chromium in ophiolites; (3) platinum group elements in ophiolitic ultramafic rocks; (4) granite-hosted uranium-thorium; (5) tin in granitic plutons and veins; (6) niobium, tantalum, and rare earth elements in alkaline intrusions; (7) tungsten and bismuth in polymetallic veins; (8) vanadium in black shales; (9) antimony in orogenic veins and replacements; (10) tellurium in epithermal deposits; and (11) uranium in peat.

Maine↗
USGS2012

Candidate cave entrances on Mars

This paper presents newly discovered candidate cave entrances into Martian near-surface lava tubes, volcano-tectonic fracture systems, and pit craters and describes their characteristics and exploration possibilities. These candidates are all collapse features that occur either intermittently along laterally continuous trench-like depressions or in the floors of sheer-walled atypical pit craters. As viewed from orbit, locations of most candidates are visibly consistent with known terrestrial features such as tube-fed lava flows, volcano-tectonic fractures, and pit craters, each of which forms by mechanisms that can produce caves. Although we cannot determine subsurface extents of the Martian features discussed here, some may continue unimpeded for many kilometers if terrestrial examples are indeed analogous. The features presented here were identified in images acquired by the Mars Odyssey's Thermal Emission Imaging System visible-wavelength camera, and by the Mars Reconnaissance Orbiter's Context Camera. Select candidates have since been targeted by the High-Resolution Imaging Science Experiment. Martian caves are promising potential sites for future human habitation and astrobiology investigations; understanding their characteristics is critical for long-term mission planning and for developing the necessary exploration technologies.

Journal of Cave and Karst Studies↗
USGS2026

Is "weediness" and "invasiveness" of weeds a function of the plant microbiome?

Over the past several decades, the extent to which microbes enhance plant development and health has become clearer; however, this has not been explored in terms of the aggressiveness and hardiness of weedy plants. In this review, we explore the hypothesis that many features of weeds and invasive plants are related to the activities of plant microbiomes. Microbes contribute to weed growth, fecundity, and fitness. They also play roles in soils, and in plants as endophytes, where they modulate plant development and protect the host from pathogens, insects, animals, and abiotic stresses. In addition, the adaptability and hardiness of weeds partly stem from the effects of endophytes on plant gene expression and genetic diversity. Weed control often involves multiple applications of herbicides or other treatments that can be costly and destructive. Weed and invasive plant control for agriculture and environment goes beyond monetary costs to negative impacts on people, animals and environment. However, with a more complete knowledge of the roles played by microbes, their symbiotic interactions may be altered to diminish aggressive traits less expensively and with fewer non target effects on environmental, human and animal health.

Grass Research↗
USGS2017

Reconstruction of spatio-temporal temperature from sparse historical records using robust probabilistic principal component regression

Scientific records of temperature and precipitation have been kept for several hundred years, but for many areas, only a shorter record exists. To understand climate change, there is a need for rigorous statistical reconstructions of the paleoclimate using proxy data. Paleoclimate proxy data are often sparse, noisy, indirect measurements of the climate process of interest, making each proxy uniquely challenging to model statistically. We reconstruct spatially explicit temperature surfaces from sparse and noisy measurements recorded at historical United States military forts and other observer stations from 1820 to 1894. One common method for reconstructing the paleoclimate from proxy data is principal component regression (PCR). With PCR, one learns a statistical relationship between the paleoclimate proxy data and a set of climate observations that are used as patterns for potential reconstruction scenarios. We explore PCR in a Bayesian hierarchical framework, extending classical PCR in a variety of ways. First, we model the latent principal components probabilistically, accounting for measurement error in the observational data. Next, we extend our method to better accommodate outliers that occur in the proxy data. Finally, we explore alternatives to the truncation of lower-order principal components using different regularization techniques. One fundamental challenge in paleoclimate reconstruction efforts is the lack of out-of-sample data for predictive validation. Cross-validation is of potential value, but is computationally expensive and potentially sensitive to outliers in sparse data scenarios. To overcome the limitations that a lack of out-of-sample records presents, we test our methods using a simulation study, applying proper scoring rules including a computationally efficient approximation to leave-one-out cross-validation using the log score to validate model performance. The result of our analysis is a spatially explicit reconstruction of spatio-temporal temperature from a very sparse historical record.

Advances in Statistical Climatology, Meteorology a↗