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At least 1,369 records · Page 76Linked to original sources

USGS2024

Trace organic contaminants in U.S. national park surface waters: Prevalence and ecological context☆

Surface water samples were collected from 264 sites across 46 U.S national parks during the period of 2009–2019. The number of sites within each park ranged from 1 to 31 and the number of samples collected within each park ranged from 1 to 201. Samples were analyzed for up to 340 trace organic contaminants (TrOCs), including pharmaceuticals, personal care products, pesticides, and various contaminants indicative of anthropogenic influence (e.g., fragrances, surfactants, flame retardants). A total of 155 TrOCs was detected in at least one sample with concentrations ranging from the reporting level of 10 ng/L (multiple contaminants) to 11,900 ng/L (p-cresol). Except for bisphenol A, DEET, theobromine, and gabapentin, TrOCs were detected in <20% of samples. Despite the relatively low detection frequencies, when TrOCs were detected, concentrations were similar to those reported from other regional or national studies. We compared detected concentrations to bioactivity concentrations and water quality benchmarks, when available, to identify occurrences of elevated concentrations and to estimate the potential for biological effects to aquatic biota. Elevated concentrations of 27 TrOCs, mostly pesticides, were detected throughout the study. To gain insight regarding potential sources, we related watershed characteristics (e.g., land cover, presence of point sources) to the number of TrOCs detected at each site. We found that the presence of wastewater treatment plants and the proportion of the watershed classified as agricultural land were the most influential variables for describing the number of pharmaceuticals and the number of pesticides present, respectively. This study represents the largest-scale study characterizing the presence and magnitude of TrOCs in U.S. national park surface waters, to date. These data provide a baseline that can be used to inform future monitoring within the parks and to assess changes in water quality.

Environmental Pollution↗

USGS2019

Weed-suppressive bacteria fail to control bromus tectorum under field conditions

The exotic winter annual grass Bromus tectorum L. (downy brome or cheatgrass) infests millions of hectares of western rangelands. Weed-suppressive bacteria (ACK55 and D7 strains of Pseudomonas fluorescens Migula 1895) have been shown to reduce B. tectorum populations in eastern Washington. Unfortunately, outside of Washington, little is known about the efficacy of these or other weed-suppressive bacteria. We used Petri-plate and plant-soil bioassays to test effects of ACK55 and D7 on B. tectorum from Montana and Wyoming. We also tested effects of ACK55 on B. tectorum at six field sites in Montana and one in Wyoming. P. fluorescens reduced B. tectorum germination and root and shoot lengths in Petri-plates but had no effect on plants during growth chamber plant-soil bioassays or field experiments. Bromus arvensis L. (field brome or Japanese brome), a species similar to B. tectorum, was prevalent at two of our sites, and ACK55 was ineffective against B. arvensis as well. Our findings contribute to a growing body of evidence that the ACK55 and D7 strains of P. fluorescens are not reliable tools for controlling B. tectorum in the Northern Great Plains, Central Rocky Mountains, and elsewhere.

Rangeland Ecology & Management↗

USGS2006

Small clusters of fast-growing trees enhance forest structure on restored bottomland sites

Despite the diversity of trees in bottomland forests, restoration on bottomland sites is often initiated by planting only a few species of slow-growing, hard mast?producing trees. Although successful at establishing trees, these young forests are slow to develop vertical structure, which is a key predictor of forest bird colonization. Furthermore, when natural seed sources are few, restored sites may be depauperate in woody species. To increase richness of woody species, maximum tree height, and total stem density, I supplemented traditional plantings on each of 40 bottomland restoration sites by planting 96 Eastern cottonwood (Populus deltoides) and American sycamore (Platanus occidentalis) in eight clusters of 12 trees. First year survival of cottonwood stem cuttings (25%) and sycamore seedlings (47%) was poor, but survival increased when afforded protection from competition with weeds. After five growing seasons, 165 of these 320 supplemental tree clusters had at least one surviving tree. Vegetation surrounding surviving clusters of supplemental trees harbored a greater number of woody species, increased stem density, and greater maximum tree height than was found on paired restoration sites without supplemental trees. These increases were primarily accounted for by the supplemental trees.

Restoration Ecology↗

USGS2022

Prioritizing pharmaceutical contaminants in Great Lakes tributaries using risk-based screening techniques

In a study of 44 diverse sampling sites across 16 Great Lakes tributaries, 110 pharmaceuticals were detected of 257 monitored. The present study evaluated the ecological relevance of detected chemicals and identified heavily impacted areas to help inform resource managers and guide future investigations. Ten pharmaceuticals (caffeine, nicotine, albuterol, sulfamethoxazole, venlafaxine, acetaminophen, carbamazepine, gemfibrozil, metoprolol, and thiabendazole) were distinguished as having the greatest potential for biological effects based on comparison to screening-level benchmarks derived using information from two biological effects databases, the ECOTOX Knowledgebase and the ToxCast database. Available evidence did not suggest substantial concern for 75% of the monitored pharmaceuticals, including 147 undetected pharmaceuticals and 49 pharmaceuticals with screening-level alternative benchmarks. However, because of a lack of biological effects information, screening values were not available for 51 detected pharmaceuticals. Samples containing the greatest pharmaceutical concentrations and having the highest detection frequencies were from Lake Erie, southern Lake Michigan, and Lake Huron tributaries. Samples collected during low-flow periods had higher pharmaceutical concentrations than those collected during increased-flow periods. The wastewater-treatment plant effluent content in streams correlated positively with pharmaceutical concentrations. However, deviation from this correlation demonstrated that secondary factors, such as multiple pharmaceutical sources, were likely present at some sites. Further research could investigate high-priority pharmaceuticals as well as those for which alternative benchmarks could not be developed.

Indiana, Michigan, Minnesota, New York, Ohio, Wisc↗

USGS2023

Holocene vegetation dynamics of circum-Arctic permafrost peatlands

Vegetation shifts in circum-Arctic permafrost peatlands drive feedbacks with important consequences for peatland carbon budgets and the extent of permafrost thaw under changing climate. Recent shrub expansion across Arctic tundra environments has led to an increase in above-ground biomass, but the long-term spatiotemporal dynamics of shrub and tree growth in circum-Arctic peatlands remain unquantified. We investigate changes in peatland vegetation composition during the Holocene using previously-published plant macrofossil records from 76 sites across the circum-Arctic permafrost zone. In particular, we assess evidence for peatland shrubification at the continental scale. We identify increasing abundance of woody vegetation in circum-Arctic peatlands from ∼8000 years BP to present, coinciding with declining herbaceous vegetation and widespread Sphagnum expansion. Ecosystem shifts varied between regions and present-day permafrost zones, with late-Holocene shrubification most pronounced where permafrost coverage is presently discontinuous and sporadic. After ∼600 years BP, we find a proliferation of non-Sphagnum mosses in Fennoscandia and across the present-day continuous permafrost zone; and rapid expansion of Sphagnum in regions of discontinuous and isolated permafrost as expected following widespread fen-bog succession, which coincided with declining woody vegetation in eastern and western Canada. Since ∼200 years BP, both shrub expansion and decline were identified at different sites across the pan-Arctic, highlighting the complex ecological responses of circum-Arctic peatlands to post-industrial climate warming and permafrost degradation. Our results suggest that shrubification of circum-Arctic peatlands has primarily occurred alongside surface drying, resulting from Holocene climate shifts, autogenic peat accumulation, and permafrost aggradation. Future shrubification of circum-Arctic peatlands under 21st century climate change will likely be spatially heterogeneous, and be most prevalent where dry microforms persist.

Quaternary Science Reviews↗

USGS1986

Mid-winter food use and body weights of mallards and wood ducks in Mississippi

We obtained esophageal food samples from 311 mallards (Anas platyrhynchos) and 94 wood ducks (Aix sponsa) and body weights from 2,118 mallards and 315 wood ducks in western Mississippi during December and January 1979-83. On average, mallards ingested 3.0% animal food, principally aquatic invertebrates, and 97.0% plant food. Rice, soybeans, and seeds of 'moist soil' plants provided 41.3, 41.6, and 10-11% of the total food intake. Wood ducks ingested nearly 100% plant food, of which 23.4% was soybeans and 74.3% was acorns from Nuttall (Quercus nuttallii), water (Q. nigra), and willow oaks (Q. phellos). Mallard food use varied with water conditions; the use of rice decreased and soybeans increased during 1980-81 when cumulative November-January precipitation was < 50% of normal. Wood duck food use varied with habitat; the diet included more acorns at sites having larger acreages of intact bottomland hardwood forest. Mallard and wood duck body weights varied within and among winters. Mallard weights decreased by about 2% from December to January each year. We considered this a regulated loss, whereas we attributed increases and decreases of 4-5% in average weights during wet and dry winters to changes in feeding opportunities associated with winter precipitation. Wood duck weights followed similar trends. We concluded that continued drainage in the Mississippi Delta will adversely affect waterfowl foraging opportunities, and that research on winter feeding ecology will progress more rapidly if we develop an understanding of the foraging efficiencies associated with alternate food resources.

Mississippi↗

USGS2022

Phylogenetic risk assessment is robust for forecasting the impact of European insects on North American conifers

Some introduced species cause severe damage, although the majority have little impact. Robust predictions of which species are most likely to cause substantial impacts could focus efforts to mitigate those impacts or prevent certain invasions entirely. Introduced herbivorous insects can reduce crop yield, fundamentally alter natural and managed forest ecosystems, and are unique among invasive species in that they require certain host plants to succeed. Recent studies have demonstrated that understanding the evolutionary history of introduced herbivores and their host plants can provide robust predictions of impact. Specifically, divergence times between hosts in the native and introduced ranges of a nonnative insect can be used to predict the potential impact of the insect should it establish in a novel ecosystem. However, divergence time estimates vary among published phylogenetic datasets, making it crucial to understand if and how the choice of phylogeny affects prediction of impact. Here, we tested the robustness of impact prediction to variation in host phylogeny by using insects that feed on conifers and predicting the likelihood of high impact using four different published phylogenies. Our analyses ranked 62 insects that are not established in North America and 47 North American conifer species according to overall risk and vulnerability, respectively. We found that results were robust to the choice of phylogeny. Although published vascular plant phylogenies continue to be refined, our analysis indicates that those differences are not substantial enough to alter the predictions of invader impact. Our results can assist in focusing biosecurity programs for conifer pests and can be more generally applied to nonnative insects and their potential hosts by prioritizing surveillance for those insects most likely to be damaging invaders.

Ecological Applications↗

USGS2023

SPCIS: Standardized Plant Community with Introduced Status database

The movement of plant species across the globe exposes native communities to new species introductions. While introductions are pervasive, two aspects of variability underlie patterns and processes of biological invasions at macroecological scales. First, only a portion of introduced species become invaders capable of substantially impacting ecosystems. Second, species that do become invasive at one location may not be invasive in others; impacts depend on invader abundance and recipient species and conditions. Accounting for these phenomena is essential to accurately understand the patterns of plant invasion and explain the idiosyncratic results reflected in the literature on biological invasions. The lack of community-level richness and the abundance of data spanning broad scales and environmental conditions have until now hindered our understanding of invasions at a macroecological scale. To address this limitation, we leveraged quantitative surveys of plant communities in the USA and integrated and harmonized nine datasets into the Standardized Plant Community with Introduced Status (SPCIS) database. The database contains 14,056 unique taxa identified within 83,391 sampling units, of which 52.6% have at least one introduced species. The SPCIS database includes comparable information on plant species occurrence, abundance, and native status across the 50 U.S. States and Puerto Rico. SPCIS can be used to answer macro-scale questions about native plant communities and interactions with invasive plants. There are no copyright restrictions on the data, and we ask the users of this dataset to cite this paper, the respective paper(s) corresponding to the dataset sampling design (all references are provided in Data S1: Metadata S1: Class II-B-2), and the references described in Data S1: Metadata S1: Class III-B-4 as applicable to the dataset being utilized.

Ecology↗

USGS2015

A Candidate Vegetation Index of Biological Integrity Based on Species Dominance and Habitat Fidelity

Indices of biological integrity of wetlands based on vascular plants (VIBIs) have been developed in many areas of the USA and are used in some states to make critical management decisions. An underlying concept of all VIBIs is that they respond negatively to disturbance. The Ohio VIBI (OVIBI) is calculated from 10 metrics, which are different for each wetland vegetation class. We present a candidate vegetation index of biotic integrity based on floristic quality (VIBI-FQ) that requires only two metrics to calculate an overall score regardless of vegetation class. These metrics focus equally on the critical ecosystem elements of diversity and dominance as related to a species’ degree of fidelity to habitat requirements. The indices were highly correlated but varied among vegetation classes. Both indices responded negatively with a published index of wetland disturbance in 261 Ohio wetlands. Unlike VIBI-FQ, however, errors in classifying wetland vegetation may lead to errors in calculating OVIBI scores. This is especially critical when assessing the ecological condition of rapidly developing ecosystems typically associated with wetland restoration and creation projects. Compared to OVIBI, the VIBI-FQ requires less field work, is much simpler to calculate and interpret, and can potentially be applied to all habitat types. This candidate index, which has been “standardized” across habitats, would make it easier to prioritize funding because it would score the “best” and “worst” of all habitats appropriately and allow for objective comparison across different vegetation classes.

Ecological Indicators↗

USGS2016

Mercury in western North America: A synthesis of environmental contamination, fluxes, bioaccumulation, and risk to fish and wildlife

Western North America is a region defined by extreme gradients in geomorphology and climate, which support a diverse array of ecological communities and natural resources. The region also has extreme gradients in mercury (Hg) contamination due to a broad distribution of inorganic Hg sources. These diverse Hg sources and a varied landscape create a unique and complex mosaic of ecological risk from Hg impairment associated with differential methylmercury (MeHg) production and bioaccumulation. Understanding the landscape-scale variation in the magnitude and relative importance of processes associated with Hg transport, methylation, and MeHg bioaccumulation requires a multidisciplinary synthesis that transcends small-scale variability. The Western North America Mercury Synthesis compiled, analyzed, and interpreted spatial and temporal patterns and drivers of Hg and MeHg in air, soil, vegetation, sediments, fish, and wildlife across western North America. This collaboration evaluated the potential risk from Hg to fish, and wildlife health, human exposure, and examined resource management activities that influenced the risk of Hg contamination. This paper integrates the key information presented across the individual papers that comprise the synthesis. The compiled information indicates that Hg contamination is widespread, but heterogeneous, across western North America. The storage and transport of inorganic Hg across landscape gradients are largely regulated by climate and land-cover factors such as plant productivity and precipitation. Importantly, there was a striking lack of concordance between pools and sources of inorganic Hg, and MeHg in aquatic food webs. Additionally, water management had a widespread influence on MeHg bioaccumulation in aquatic ecosystems, whereas mining impacts where relatively localized. These results highlight the decoupling of inorganic Hg sources with MeHg production and bioaccumulation. Together the findings indicate that developing efforts to control MeHg production in the West may be particularly beneficial for reducing food web exposure instead of efforts to simply control inorganic Hg sources.

Science of the Total Environment↗

USGS2002

Avian response to bottomland hardwood reforestation: The first 10 years

Bottomland hardwood forests were planted on agricultural fields in Mississippi and Louisiana predominantly using either Quercus species (oaks) or Populus deltoides (eastern cottonwood). We assessed avian colonization of these reforested sites between 2 and 10 years after planting. Rapid vertical growth of cottonwoods (circa 2–3 m/year) resulted in sites with forest structure that supported greater species richness of breeding birds, increased Shannon diversity indices, and supported greater territory densities than on sites planted with slower-growing oak species. Grassland birds ( Spiza americana [Dickcissel] and Sturnella magna [Eastern Meadowlark]) were indicative of species breeding on oak-dominated reforestation no more than 10 years old. Agelaius phoeniceus (Red-winged Blackbird) and Colinus virginianus (Northern Bobwhite) characterized cottonwood reforestation no more than 4 years old, whereas 14 species of shrub-scrub birds (e.g., Passerina cyanea [Indigo Bunting]) and early-successional forest birds (e.g., Vireo gilvus [Warbling vireo]) typified cottonwood reforestation 5 to 9 years after planting. Rates of daily nest survival did not differ between reforestation strategies. Nest parasitism increased markedly in older cottonwood stands but was overwhelmed by predation as a cause of nest failure. Based on Partners in Flight prioritization scores and territory densities, the value of cottonwood reforestation for avian conservation was significantly greater than that of oak reforestation during their first 10 years. Because of benefits conferred on breeding birds, we recommend reforestation of bottomland hardwoods should include a high proportion of fast-growing early successional species such as cottonwood.

Restoration Ecology↗

USGS2018

Interisland genetic structure of two endangered Hawaiian waterbirds: The Hawaiian Coot and Hawaiian Gallinule

Most of Hawaii's endemic avifauna are species of conservation concern. Some of Hawaii's endangered waterbirds, however, have increased in number as a result of intensive management of wetlands. To inform these conservation efforts, we examined interisland genetic structure and gene flow within 2 Hawaiian endemic waterbirds, the Hawaiian Coot ( Fulica alai ) and the Hawaiian subspecies of the Common Gallinule ( Gallinula galeata sandvicensis ), using microsatellite and mitochondrial loci. Hawaiian Coots and Hawaiian Gallinules occupy coastal wetlands and exhibit similar life history characteristics and generation times, although they may differ in dispersal propensity. Mark–resight data for Hawaiian Coot indicate interisland movements, whereas Hawaiian Gallinules are sedentary. Genetic diversity is partitioned across the landscape differently for Hawaiian Coots and Hawaiian Gallinules; patterns of variation are likely influenced by behavioral and ecological mechanisms. Hawaiian Coots exhibit low levels of structure at microsatellite loci ( F ST = 0.029) and high levels of gene flow among islands. Conversely, Hawaiian Gallinules are highly structured across marker types (microsatellite F ST = 0.205, mtDNA control region F ST = 0.370, mtDNA ND2 F ST = 0.087), with restricted recent gene flow. Patterns of gene flow have changed after the population declines in the early to mid-1900s. Gene flow estimates indicate historical dispersal from Kauai to Oahu in both species, while recent estimates show individual Hawaiian Coots dispersing from Oahu and restricted gene flow between islands for the Hawaiian Gallinule. Changes in gene flow through time suggest that patterns of dispersal may be an artifact of the availability of habitat, which may be indirectly associated with the synergistic influences of population density and wetland quality. Despite recent population size increases for both species, continued threats to Hawaiian waterbirds (i.e. nonnative mammalian predators and invasive plants, avian disease, altered hydrology, and saltwater inundation of freshwater wetlands) will likely require continued active management to maintain viable populations.

Hawaii↗

USGS2020

Bioclimatic modeling of potential vegetation types as an alternative to species distribution models for projecting plant species shifts under changing climates

Land managers need new tools for planning novel futures due to climate change. Species distribution modeling (SDM) has been used extensively to predict future distributions of species under different climates, but their map products are often too coarse for fine-scale operational use. In this study we developed a flexible, efficient, and robust method for mapping current and future distributions and abundances of vegetation species and communities at the fine spatial resolutions that are germane to land management. First, we mapped Potential Vegetation Types (PVTs) using conventional statistical modeling techniques (Random Forests) that used bioclimatic ecosystem process and climate variables as predictors. We obtained over 50% accuracy across 13 mapped PVTs for our study area. We then applied future climate projections as climate input to the Random Forest model to generate future PVT maps, and used field data describing the occurrence of tree and non-tree species in each PVT category to model and map species distribution for current and future climate. These maps were then compared to two previous SDM mapping efforts with over 80% agreement and equivalent accuracy. Because PVTs represent the biophysical potential of the landscape to support vegetation communities as opposed to the vegetation that currently exists, they can be readily linked to climate forecasts and correlated with other, climate-sensitive ecological processes significant in land management, such as fire regimes and site productivity.

Montana↗

USGS2018

Assessment of chronic low‐dose elemental and radiological exposures of biota at the Kanab North uranium mine site in the Grand Canyon watershed

High‐grade U ore deposits are in various stages of exploitation across the Grand Canyon watershed, yet the effects of U mining on ecological and cultural resources are largely unknown. We characterized the concentrations of Al, As, Bi, Cd, Co, Cu, Fe, Pb, Hg, Mo, Ni, Se, Ag, Tl, Th, U, and Zn, gross alpha and beta activities, and U and Th radioisotopes in soil, vegetation ( Hesperostipa comata , Artemisia tridentata, Tamarix chinensis ), and rodents ( Peromyscus maniculatus , P. boylii ) to waste material at the Kanab North mine, a mine with decades‐long surficial contamination, and compared the concentrations ( P < 0.01) to those at a premining site (Canyon Mine). Rodent tissues were also analyzed for radium‐226 and microscopic lesions. Radioactivities and some elemental concentrations (e.g., Co, Pb, U) were greater in the Kanab North mine biological samples than in Canyon Mine biota, indicating a mining‐related elemental signature. Mean rodent Ra‐226 (111 Bq/kg dry weight [dry wt]) was 3 times greater than expected, indicating radioactive disequilibrium. Multiple soil sample U concentrations exceeded a screening benchmark, growth inhibition thresholds for sensitive plants, and an EC 20 for a soil arthropod. Lesions associated with metals exposure were also observed more frequently in rodents at Kanab North than those at Canyon Mine but could not be definitively attributed to U mining. Our results indicate that Kanab North biota have taken up U mining‐related elements owing to chronic exposure to surficial contamination. However, no literature‐based effects thresholds for small rodents were exceeded, and only a few soil and vegetation thresholds for sensitive species were exceeded; therefore, adverse effects to biota from U mining‐related elements at Kanab North are unlikely despite chronic exposure.

Integrated Environmental Assessment and Management↗

USGS1981

Establishment of seeded grasslands for wildlife habitat in the prairie pothole region

Techniques are described for establishment of seeded grasslands on cultivated soils to provide wildlife habitat within the glaciated prairie pothole region in the north-central United States. Management of grassland habitats on a sound ecological basis is an important wildlife management activity in the region. The primary purpose of the guidelines in this publication is to help managers establish and maintain good stands of seeded cover for waterfowl nesting and use by other prairie wildlife. Several options are available for selecting a type of cover to be established. The following seeded grassland types are described: (1) introduced cool-season grasses and legumes; (2) tall, warm-season native grasses; and (3) mixed-grass prairie grasses. Major vegetative species recommended for (1) are tall wheatgrass (Agropyron elongatum), intermediate wheatgrass (A. intermedium), alfalfa (Medicago sativa), and sweetclover (Melilotus spp.); for (2) are big bluestem (Andropogon gerardi), indiangrass (Sorghastrum nutans), and switchgrass (Panicum virgatum); for (3) are green needlegrass (Stipa viridula), little bluestem (Andropogon scoparius), western wheatgrass (Agropyron smithii), and sideoats grama (Bouteloua curtipendula). Important factors that affect the success of establishment of seeded grasslands include site adaptability, site preparation, seedbed preparation, planting equipment and methods, rates and dates of seeding, and seed sources. A management goal for seeded grasslands intended to provide optimum habitat for dabbling duck nesting should be to maintain vigorous stands of vegetation with the tallest, most dense cover form that is possible under prevailing soil and climatic conditions. Grassland management is a never-ending job and seeded grasslands require periodic rejuvenation to maintain them in an optimum condition. Prescribed burning and planned grazing systems are acceptable methods for periodically rejuvenating seeded native grasses. Stands of introduced grasses and legumes are best maintained by mechanical tillages; reseeding is often necessary after 1 or 2 years of grain farming. The need for good management of all areas dedicated to wildlife habitat is emphasized by the rate of destruction and degradation of grassland habitats. Desirable wildlife populations can be benefited by establishment and maintenance of high-quality stands of seeded grasslands.

Prairie pothole region↗

USGS2006

Seasonal dynamics of microbial community composition and function in oak canopy and open grassland soils

Soil microbial communities are closely associated with aboveground plant communities, with multiple potential drivers of this relationship. Plants can affect available soil carbon, temperature, and water content, which each have the potential to affect microbial community composition and function. These same variables change seasonally, and thus plant control on microbial community composition may be modulated or overshadowed by annual climatic patterns. We examined microbial community composition, C cycling processes, and environmental data in California annual grassland soils from beneath oak canopies and in open grassland areas to distinguish factors controlling microbial community composition and function seasonally and in association with the two plant overstory communities. Every 3 months for up to 2 years, we monitored microbial community composition using phospholipid fatty acid (PLFA) analysis, microbial biomass, respiration rates, microbial enzyme activities, and the activity of microbial groups using isotope labeling of PLFA biomarkers (13C-PLFA) . Distinct microbial communities were associated with oak canopy soils and open grassland soils and microbial communities displayed seasonal patterns from year to year. The effects of plant species and seasonal climate on microbial community composition were similar in magnitude. In this Mediterranean ecosystem, plant control of microbial community composition was primarily due to effects on soil water content, whereas the changes in microbial community composition seasonally appeared to be due, in large part, to soil temperature. Available soil carbon was not a significant control on microbial community composition. Microbial community composition (PLFA) and 13C-PLFA ordination values were strongly related to intra-annual variability in soil enzyme activities and soil respiration, but microbial biomass was not. In this Mediterranean climate, soil microclimate appeared to be the master variable controlling microbial community composition and function. ?? 2006 Springer Science+Business Media, Inc.

Microbial Ecology↗

USGS2016

Functional role of bacteria from invasive Phragmites australis in promotion of host growth

We hypothesize that bacterial endophytes may enhance the competitiveness and invasiveness of Phragmites australis. To evaluate this hypothesis, endophytic bacteria were isolated from P. australis. The majority of the shoot meristem isolates represent species from phyla Firmicutes, Proteobacteria, and Actinobacteria. We chose one species from each phylum to characterize further and to conduct growth promotion experiments in Phragmites. Bacteria tested include Bacillus amyloliquefaciens A9a, Achromobacter spanius B1, and Microbacterium oxydans B2. Isolates were characterized for known growth promotional traits, including indole acetic acid (IAA) production, secretion of hydrolytic enzymes, phosphate solubilization, and antibiosis activity. Potentially defensive antimicrobial lipopeptides were assayed for through application of co-culturing experiments and mass spectrometer analysis. B. amyloliquefaciens A9a and M. oxydans B2 produced IAA. B. amyloliquefaciens A9a secreted antifungal lipopeptides. Capability to promote growth of P. australis under low nitrogen conditions was evaluated in greenhouse experiments. All three isolates were found to increase the growth of P. australis under low soil nitrogen conditions and showed increased absorption of isotopic nitrogen into plants. This suggests that the Phragmites microbes we evaluated most likely promote growth of Phragmites by enhanced scavenging of nitrogenous compounds from the rhizosphere and transfer to host roots. Collectively, our results support the hypothesis that endophytic bacteria play a role in enhancing growth of P. australis in natural populations. Gaining a better understanding of the precise contributions and mechanisms of endophytes in enabling P. australis to develop high densities rapidly could lead to new symbiosis-based strategies for management and control of the host.

New Jersey↗

USGS2025

Biodiversity surveys of Wake Atoll—Featuring field guides for plants, arthropods, and herpetofauna

Introduction The U.S. Air Force (USAF) issued funds to the U.S. Geological Survey (USGS) to update the biosecurity plan, create a current (2019) flora and fauna species identification index, and do container evaluations for the presence of potential invasives. The current (2019) biosecurity protocols used for prevention were evaluated, and new biodiversity surveys were completed for terrestrial vegetation and arthropods and included the first formal reptile surveys. Results from field efforts add to existing knowledge and may identify new species arrivals to Wake. One goal of this project was to update and compile established species information for the atoll and create species identification guides for the three taxonomic groups surveyed. We made these flora and fauna species identification guides by compiling results of the recent (2019) and historical surveys. The guides can be used as resident desktop references, as a baseline for assessing future natural resource surveys, and to assist with guiding management actions. We refer herein to biosecurity and integrated pest management plan materials, which we created simultaneously to inform current (2019) biosecurity and to identify some of the top invasive species at Wake. This study was done in cooperation with the USAF, and surveys were performed for the 611th Civil Engineer Squadron Natural Resources Program, ACES PROJECT #YGFZ170002 under agreement number F2MUAA7116GW02 between the USAF and the USGS Western Ecological Research Center.

Open-File Report↗