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At least 1,369 records · Page 76Linked to original sources
USGS1974

Pathophysiology of infectious hematopoietic necrosis virus disease in rainbow trout (Salmo gairdneri): early changes in blood and aspects of the immune Response after Injection of IHN Virus

Juvenile rainbow trout ( Salmo gairdneri ) were injected with infectious hematopoietic necrosis (IHN) virus and various hematological and blood chemical changes were monitored over 9 days. The packed cell volume, hemoglobin, red blood cell count, and plasma bicarbonate were significantly depressed by day 4. Plasma chloride, calcium, phosphorus, total protein, and blood cell types did not change during the 9 days. Furthermore, plasma LDH isozyme was significantly increased by the fourth day, and fish infected with infectious pancreatic necrosis virus, Vibrio anguillarum , Aeromonas salmonicida , and redmouth bacterium did not show specific LDH isozyme alterations. Acid-base alterations occurred at 10 C but not at 18 C. The acid-base imbalance and elevation of the LDH isozyme were consistently associated with the early development of the disease.The immune response after injection of IHN virus was determined and protection from disease was tested by passive immunization. Actively immunized fish developed IHN-neutralizing antibodies within 54 days after injection of virus, and the antibodies were protective when juvenile fish were passively immunized and experimentally challenged with IHN virus.

Journal of the Fisheries Research Board of Canada↗
USGS1979

Mortality of experimentally descaled smolts of coho salmon (Oncorhynchus kisutch) in fresh and salt water

Removal of slime from 25% of the body caused no deaths among smolts of coho salmon in fresh water or in seawater (28‰). Removal of slime and scales from the same percentage of body area caused no deaths in fresh water, but 75% mortality within 10 days in seawater. The 10-day median tolerance limit was 10% scale removal immediately before the smolts entered seawater. Mortality was highest when the scales were removed from the area of the rib cage. Recovery of smolts in fresh water from a loss of scales that would be lethal in seawater occurred rapidly; 90% of the fish regained tolerance to seawater within 1 day.

Transactions of the American Fisheries Society↗
USGS1985

Use of otoliths to determine age and growth of largemouth bass in Florida

The annual formation of otolith annuli was validated through age 5 for Florida largemouth bass Micropterus salmoides floridanus. Sectioned otoliths (sagittae) gave more reliable ages than whole otoliths. Beginning at age 2, at least one annulus was obscure in some whole‐otolith mounts, a problem that worsened with fish age. By age 5, over 20% of the whole otoliths gave under‐estimates of true age; otoliths producing these errors came from fish with slower than average growth rates. Sectioned otoliths gave poorer regressions (lower coefficients of determination) of otolith radius on body length than intact structures because the sectioning plane varied slightly among otoliths. Nevertheless, back calculations of fish size and growth from sectioned and correctly aged whole otoliths were equally accurate. Otolith sectioning is the procedure of choice for age‐and‐growth analysis of Florida largemouth bass. Whole otoliths, however, require much less time for analysis than sectioned ones and may be used for rapidly growing fish and fish known to be age 3 or younger.

Florida↗
USGS1990

Immunological discrimination of Atlantic striped bass stocks

Stocks of Atlantic striped bass Morone saxatilis that were assumed to be geographically isolated during spawning showed strong antigenic differences in blood serum albumin. A discriminant function was estimated from the immunologic responses of northern (Canadian and Hudson River) and southern (Chesapeake Bay and Roanoke River) stocks to two reference antisera. The function correctly classified 92% of the northern and 95% of the southern fish in the training set. Cross-validation revealed similar percentages of correct classification for fish that were of known origin but not used to estimate the discriminant function. Monte Carlo experiments were used to evaluate the ability of the discriminant function to predict the relative contribution of northern fish in samples of various size and stock composition. Averages of predicted proportions of northern fish in the samples agreed well with actual proportions. Coefficients of variation (100 × SD/mean) in the predicted proportions ranged from 1.5 to 36% for samples of 50–400 fish that contained at least 10% northern stock. In samples that contained only 2% northern stock, however, at least 1,600 fish were required to achieve similar levels of precision.

Transactions of the American Fisheries Society↗
USGS1997

Fish assemblages and environmental correlates in least-disturbed streams of the upper Snake River basin

Fish assemblages and environmental variables were evaluated from 37 least‐disturbed, 1st‐ through 6th‐order streams and springs in the upper Snake River basin, western USA. Data were collected as part of the efforts by the U.S. Geological Survey National Water Quality Assessment Program and the Idaho State University Stream Ecology Center to characterize aquatic biota and associated habitats in least‐disturbed coldwater streams. Geographically, the basin comprises four ecoregions. Environmental variables constituting various spatial scales, from watershed characteristics to instream habitat measures, were used to examine distribution patterns in fish assemblages. Nineteen fish species in the families Salmonidae, Cottidae, Cyprinidae, and Catostomidae were collected. Multivariate analyses showed high overlap in stream fish assemblages among the ecoregions. Major environmental factors determining species distributions in the basin were stream gradient, watershed size, conductivity, and percentage of the watershed covered by forest. Lowland streams (below 1,600 m in elevation), located mostly in the Snake River Basin/High Desert ecoregion, displayed different fish assemblages than upland streams (above 2,000 m elevation) in the Northern Rockies, Middle Rockies, and Northern Basin and Range ecoregions. For example, cottids were not found in streams above 2,000 m in elevation. In addition, distinct fish assemblages were found in tributaries upstream and downstream from the large waterfall, Shoshone Falls, on the Snake River. Fish metrics explaining most of the variation among sites included the total number of species, number of native species, number of salmonid species, percent introduced species, percent cottids, and percent salmonids. Springs also exhibited different habitat conditions and fish assemblages than streams. The data suggest that the evolutionary consequences of geographic features and fish species introductions transcend the importance of ecoregion boundaries on fish distributions in the upper Snake River basin.

Idaho, Oregon, Washington, Wyoming↗
USGS1997

Cutthroat trout avoidance of metals and conditions characteristic of a mining waste site: Coeur d'Alene River, Idaho

The South Fork basin of the Coeur d'Alene River, Idaho has been an area of heavy mining activity since the 1880s. The mining operations have resulted in elevated concentrations of metals in surface water, most notably cadmium, lead, zinc, and, to a lesser extent, copper. The metals affected surface water quality downstream in the Coeur d'Alene basin and are suspected to be one of the primary reasons for the reduction in populations of native westslope cutthroat trout Oncorhynchus clarki lewisi. The avoidance response of a surrogate species, Snake River cutthroat trout O. clarki (unnamed subspecies), was evaluated against conditions simulating those in the Coeur d'Alene River basin. Cutthroat trout avoided a metals mixture of these concentrations: Cd (0.30 ??g/L), Cu (6.0 ??g/L), Pb (0.6 ??g/L), and Zn (28 ??g/L). The avoidance response to either Cu or Zn alone was similar to the avoidance response to the mixture, suggesting that avoidance to the mixture was due to these metals. After acclimation to Zn at 55 ??g/L for 90 d, cutthroat trout detected and preferred a lower Zn concentration of 28 ??g/L. The lowest Zn concentrations avoided (28 ??g/L) were 1/6 to 1/78 the Zn concentrations measured in the South Fork and lower Coeur d'Alene River basins. Avoidance of metals-contaminated habitats by cutthroat trout may be, in part, responsible for reduced fish populations.

Transactions of the American Fisheries Society↗
USGS2000

Composition of fish communities in relation to stream acidification and habitat in the Neversink River, New York

The effects of acidification in lotic systems are not well documented. Spatial and temporal variability of habitat and water quality complicate the evaluation of acidification effects in streams and rivers. The Neversink River in the Catskill Mountains of southeastern New York, the tributaries of which vary from well buffered to severely acidified, provided an opportunity to investigate the extent and magnitude of acidification effects on fish communities of headwater systems. Composition of fish communities, water quality, stream hydrology, stream habitat, and physiographic factors were characterized from 1991 to 1995 at 16 first- to fourth-order sites in the basin. Correlation and regression analyses were used to develop empirical models and to assess the relations among fish species richness, total fish density, and total fish biomass and environmental variables. Chronic and episodic acidification and elevated concentrations of inorganic monomeric aluminum were common, and fish populations were rare or absent from several sites in the upper reaches of the basin; as many as six fish species were collected from sites in the lower reaches of the basin. Species distributions and species richness were most highly related to stream pH, acid-neutralizing capacity (ANC), inorganic monomeric aluminum (Al im ), calcium (Ca) 2+ , and potassium (K) + concentrations, site elevation, watershed drainage area, and water temperature. Fish density was most highly related to stream pH, Al im , ANC, K + , Ca 2+ , and magnesium (Mg) 2+ concentrations. Fish biomass, unlike species richness and fish density, was most highly related to physical habitat characteristics, water temperature, and concentrations of Mg 2+ and silicon. Acidity characteristics were of secondary importance to fish biomass at all but the most severely acidified sites. Our results indicate that (1) the total biomass of fish communities was not seriously affected at moderately to strongly acidified sites; (2) species richness and total density of fish were adversely affected at strongly to severely acidified sites; and (3) possible changes in competitive interactions may mitigate negative effects of acidification on fish communities in parts of the Neversink River Basin.

New York↗
USGS1998

Seasonal migration and homing of channel catfish in the lower Wisconsin River, Wisconsin

A multiyear tag and recapture study was conducted to determine whether channel catfish Ictalurus punctatus were migratory and if they had strong homing tendencies. Over 10,000 channel catfish were tagged from the lower Wisconsin River and adjacent waters of the upper Mississippi River during the 3-year sampling period. Data on movements were obtained from study recaptures and through tag returns and harvest information provided by sport anglers and commercial fishers. Channel catfish occupied relatively small home ranges during summer, migrated downstream to the upper Mississippi River in autumn, then migrated back up the Wisconsin River in spring to spawn and to occupy the same summer home sites they had used in previous summers. Fish size was a factor in the degree of fidelity to summer home sites, with larger fish showing greater fidelity.

North American Journal of Fisheries Management↗
USGS2005

Examining Neosho madtom reproductive biology using ultrasound and artificial photothermal cycles

We examined whether extended laboratory simulation of natural photothermal conditions could stimulate reproduction in the Neosho madtom Noturus placidus, a federally threatened species. For 3 years, a captive population of Neosho madtoms was maintained under simulated natural conditions and monitored routinely with ultrasound for reproductive condition. Female Neosho madtoms cycled in and out of spawning condition, producing and absorbing oocytes annually. Internal measurements made by means of ultrasound indicated the summer mean oocyte size remained consistent over the years, although estimated fecundity increased with increasing fish length. In the summer of 2001, after 3 years in the simulated natural environment, 13 out of 41 fish participated in 10 spawnings. Simulation of the natural photothermal environment, coupled with within-day temperature fluctuations during the spring rise, seemed important for the spawning of captive Neosho madtoms. The use of ultrasound to assess the reproductive status in Neosho madtoms was effective and resulted in negligible stress or injury to the fish. These procedures may facilitate future culture of this species and other madtoms Noturus spp., especially when species are rare, threatened, or endangered. ?? Copyright by the American Fisheries Society 2005.

North American Journal of Aquaculture↗
USGS2006

Random versus fixed-site sampling when monitoring relative abundance of fishes in headwater streams of the upper Colorado River basin

Native fishes of the upper Colorado River basin (UCRB) have declined in distribution and abundance due to habitat degradation and interactions with normative fishes. Consequently, monitoring populations of both native and nonnative fishes is important for conservation of native species. We used data collected from Muddy Creek, Wyoming (2003-2004), to compare sample size estimates using a random and a fixed-site sampling design to monitor changes in catch per unit effort (CPUE) of native bluehead suckers Catostomus discobolus, flannelmouth suckers C. latipinnis, roundtail chub Gila robusta, and speckled dace Rhinichthys osculus, as well as nonnative creek chub Semotilus atromaculatus and white suckers C. commersonii. When one-pass backpack electrofishing was used, detection of 10% or 25% changes in CPUE (fish/100 m) at 60% statistical power required 50-1,000 randomly sampled reaches among species regardless of sampling design. However, use of a fixed-site sampling design with 25-50 reaches greatly enhanced the ability to detect changes in CPUE. The addition of seining did not appreciably reduce required effort. When detection of 25-50% changes in CPUE of native and nonnative fishes is acceptable, we recommend establishment of 25-50 fixed reaches sampled by one-pass electrofishing in Muddy Creek. Because Muddy Creek has habitat and fish assemblages characteristic of other headwater streams in the UCRB, our results are likely to apply to many other streams in the basin. ?? Copyright by the American Fisheries Society 2006.

North American Journal of Fisheries Management↗
USGS2008

Response of fish populations to natural channel design restoration in streams of the Catskill Mountains, New York

Many streams and rivers throughout North America have been extensively straightened, widened, and hardened since the middle 1800s, but related effects on aquatic ecosystems have seldom been monitored, described, or published. Beginning in the early 1990s, reach-level restoration efforts began to base projects on natural channel design (NCD) techniques and Rosgen's (1994b, 1996) river classification system in an effort to duplicate or mimic stable reference reach geomorphology. Four reaches in three streams of the Catskill Mountains, New York, were restored from 2000 to 2002 using NCD techniques to decrease bed and bank erosion rates, decrease sediment loads, and improve water quality. The effects of restoration on the health of fish assemblages were assessed through a before-after, control-impact (BACI) study design to quantify the net changes in population and community indices at treatment reaches relative to index changes at unaltered reference reaches from 1999 to 2004. After restoration, community richness and biomass at treatment reaches increased by more than one-third. Changes in fish communities were caused mainly by shifts in dominant species populations; fish community biomass and total fish abundance were generally dominated by daces or daces and sculpins before restoration and by one or more salmonid species after restoration. Density and biomass of eastern blacknose dace Rhinichthys atratulus, longnose dace R. cataractae, and slimy sculpin Cottus cognatus did not change appreciably, whereas net salmonid density and biomass increased substantially after restoration. These changes were driven primarily by large increases in populations of brown trout Salmo trutta. The findings demonstrate that the structure, function, and ultimately the health of resident fish populations and communities can be improved, at least over the short term, through NCD restoration in perturbed streams of the Catskill Mountains. ?? Copyright by the American Fisheries Society 2008.

North American Journal of Fisheries Management↗
USGS2023

Bluegill population demographics as related to abiotic and biotic factors in Florida lakes

Research on Bluegills, Lepomis macrochirus R., is abundant but typically focuses on water bodies with similar environmental conditions. We assessed Bluegill density, relative abundance (catch per unit effort [CPUE] by electrofishing), growth, and size structure in 60 lakes with wide-ranging surface areas (2–12,412 ha), trophic states (oligotrophic–hypereutrophic), and macrophyte abundances (0.3–100 percent of lake volume inhabited [PVI]) across Florida, USA. Bluegill density and CPUE increased with lake productivity and decreased with macrophyte abundance. Bluegill growth increased with lake productivity and CPUE of stock-length Florida Bass, Micropterus floridanus L., a Bluegill predator. Bluegill size structure increased with lake productivity and decreased with Bluegill density. Results indicate that Bluegill fisheries with abundant individuals of quality size (≥150 mm) require productive (>25 μg/L chlorophyll- a concentration) lakes with moderate to high macrophyte coverage (PVI 50–100), abundant stock-length Florida Bass (>40 fish/h of electrofishing), and Bluegill densities <300 fish/ha. This study provides an approach to predict Bluegill population demographics based on abiotic and biotic factors, establish fisheries management expectations, and develop regional and lake-specific management tools.

Florida↗
USGS2012

2011 Georgiana Slough non-physical barrier performance evaluation project report

The Sacramento River and its tributaries support populations of anadromous fish species including winter-run, spring-run, fall-run, and late fall&ndash;run Chinook salmon ( Oncorhynchus tshawytscha ); and steelhead ( O. mykiss ). Several of these species are listed as threatened or endangered under the California Endangered Species Act (CESA), federal Endangered Species Act (ESA), or both. These species spawn and rear in Sacramento River tributaries; adults use the mainstem Sacramento River for primarily upstream migration and juveniles use it for downstream migration. Juvenile Chinook salmon and steelhead migrate through the lower river during winter and spring. During their downstream migration, juvenile salmonids encounter alternative pathways, such as Sutter and Steamboat Sloughs, the Sacramento&ndash;San Joaquin Delta (Delta), Delta Cross Channel (DCC), and Georgiana Slough. Likewise, sturgeon juveniles migrate downstream in the Sacramento River basin to the Delta, utilizing the distributary channels to rear within and migrate through the system. Georgiana Slough is a natural channel that allows water and fish to move into the interior Delta. Previous studies have demonstrated that juvenile Chinook salmon experience greater mortality when migrating into Georgiana Slough than those juveniles that continue to migrate downstream in the Sacramento River (Perry 2010). Movement and/or diversion of these fish into the interior and south Delta increases the likelihood of losses through predation, entrainment into non-project Delta diversions, and mortality associated with the State Water Project (SWP) and Central Valley Project (CVP) pumping facilities in the south Delta (Perry 2010; NMFS 2009). Figure ES-1 shows the migration pathways in the lower Sacramento River and Delta for outmigrating anadromous salmonids, and the location of the DCC, and the SWP and CVP pumping facilities in the south Delta. Passage of juvenile salmonids from the Sacramento River into the interior Delta through the DCC can be reduced through seasonal closure of the radial gates (February through May); however, no similar protection is available to reduce the movement of juvenile salmonids from the Sacramento River into the interior Delta through Georgiana Slough. Flows into Georgiana Slough improve water quality and flushing in the interior Delta and free access encourages use by recreational boaters. Because of these benefits, alternatives to the installation of a physical barrier (i.e. radial gates), are being investigated. Under the ESA, the National Marine Fisheries Service (NMFS) issued the 2009 Biological and Conference Opinion for the Long‐Term Operations of the Central Valley Project and State Water Project (BO) for Chinook salmon and other listed anadromous fish species (NMFS 2009). Reasonable and Prudent Alternative (RPA) Action IV.1.3 of the BO requires the California Department of Water Resources (DWR) and the U.S. Bureau of Reclamation (Reclamation) to consider engineering solutions to reduce the diversion of juvenile salmonids from the Sacramento River into the interior and south Delta. DWR implemented the 2011 Georgiana Slough NonPhysical Barrier (GSNPB) Study to test the effectiveness of using a non-physical barrier, referred to as a behavioral Bio-Acoustic Fish Fence (BAFF), that combines three stimuli to deter juvenile Chinook salmon from entering Georgiana Slough: sound, high-intensity modulated light (previously known as stroboscopic light), and a bubble curtain. This report presents the results of the experimental tests conducted in 2011.

California↗
USGS2018

Hierarchical modeling assessment of the influence of watershed stressors on fish and invertebrate species in Gulf of Mexico estuaries

The northern Gulf of Mexico (GoM) spans five U.S. states and encompasses estuaries that vary greatly in size, shape, upstream river input, eutrophication status, and biotic communities. Given the variability among these estuaries, assessing their biological condition relative to anthropogenic stressors is challenging, but important to regional fisheries management and habitat conservation initiatives. Here, a hierarchical generalized linear modeling approach was developed to predict species presence in bottom trawl samples, using data from 33 estuaries over a nineteen-year study period. This is the first GoM estuary assessment to leverage Gulf-wide trawl data to develop species-level indicators and a quantitative index of estuary disturbance. After controlling for sources of variability at the sampling event, estuary, state, and sampling program levels, our approach screened for statistically significant relationships between watershed-level anthropogenic stressors and fish and invertebrate species presence. Modeling results indicate species level indicators with sensitivities to landscape stressor gradients. The most influential stressors include total anthropogenic land use, crop land use, and the number of toxic release sites in upstream watersheds, as well as agriculture in the shoreline buffer, each of which was significantly related to between 21% and 39% of the 57 species studied. Averaging the effects of these influential stressors across species, we develop a quantitative estuary stress index that can be compared against benchmark conditions. In general, disturbance levels were greatest in estuaries west of the Mississippi delta and in highly developed estuaries in southwest Florida. Estuaries from the Florida panhandle to the eastern Mississippi delta had less anthropogenic stress.

Gulf of Mexico↗
USGS2010

The bioeconomic impact of different management regulations on the Chesapeake Bay blue crab fishery

The harvest of blue crabs Callinectes sapidus in Chesapeake Bay declined 46% between 1993 and 2001 and remained low through 2008. Because the total market value of this fishery has declined by an average of US $ 3.3 million per year since 1993, the commercial fishery has been challenged to maintain profitability. We developed a bioeconomic simulation model of the Chesapeake Bay blue crab fishery to aid managers in determining which regulations will maximize revenues while ensuring a sustainable harvest. We compared 15 different management scenarios, including those implemented by Maryland and Virginia between 2007 and 2009, that sought to reduce female crab harvest and nine others that used seasonal closures, different size regulations, or the elimination of fishing for specific market categories. Six scenarios produced the highest revenues: the 2008 and 2009 Maryland regulations, spring and fall closures for female blue crabs, and 152- and 165-mm maximum size limits for females. Our most important finding was that for each state the 2008 and 2009 scenarios that implemented early closures of the female crab fishery produced higher revenues than the 2007 scenario, in which no early female closures were implemented. We conclude that the use of maximum size limits for female crabs would not be feasible despite their potentially high revenue, given the likelihood that the soft-shell and peeler fisheries cannot be expanded beyond their current capacity and the potentially high mortality rate for culled individuals that are the incorrect size. Our model results support the current use of seasonal closures for females, which permit relatively high exploitation of males and soft-shell and peeler blue crabs (which have high prices) while keeping the female crab harvest sustainable. Further, our bioeconomic model allows for the inclusion of an economic viewpoint along with biological data when target reference points are set by managers.

Chesapeake Bay↗
USGS2016

Prey size and availability limits maximum size of rainbow trout in a large tailwater: insights from a drift-foraging bioenergetics model

The cold and clear water conditions present below many large dams create ideal conditions for the development of economically important salmonid fisheries. Many of these tailwater fisheries have experienced declines in the abundance and condition of large trout species, yet the causes of these declines remain uncertain. Here, we develop, assess, and apply a drift-foraging bioenergetics model to identify the factors limiting rainbow trout (Oncorhynchus mykiss) growth in a large tailwater. We explored the relative importance of temperature, prey quantity, and prey size by constructing scenarios where these variables, both singly and in combination, were altered. Predicted growth matched empirical mass-at-age estimates, particularly for younger ages, demonstrating that the model accurately describes how current temperature and prey conditions interact to determine rainbow trout growth. Modeling scenarios that artificially inflated prey size and abundance demonstrate that rainbow trout growth is limited by the scarcity of large prey items and overall prey availability. For example, shifting 10% of the prey biomass to the 13 mm (large) length class, without increasing overall prey biomass, increased lifetime maximum mass of rainbow trout by 88%. Additionally, warmer temperatures resulted in lower predicted growth at current and lower levels of prey availability; however, growth was similar across all temperatures at higher levels of prey availability. Climate change will likely alter flow and temperature regimes in large rivers with corresponding changes to invertebrate prey resources used by fish. Broader application of drift-foraging bioenergetics models to build a mechanistic understanding of how changes to habitat conditions and prey resources affect growth of salmonids will benefit management of tailwater fisheries.

Arizona↗
USGS2015

Dealing with largemouth bass virus: benefits of multisector collaboration

Largemouth bass virus (LMBV), a recently identified pathogen, affected largemouth bass (Micropterus salmoides) in the southeastern United States beginning in the 1990s. Concern about the impacts of this little-known pathogen on largemouth bass populations, effects on fisheries management, and the need to provide anglers and the media with consistent and accurate information prompted a private organization (Bass Anglers Sportsman Society) to invite managers and researchers from state and federal agencies and universities to a series of five annual public workshops beginning in 2000. These workshops provided a mechanism to share information, identify and prioritize action items, and develop consensus information and outreach materials that could be provided to bass anglers and the media. Regionalizing the LMBV issue and collaboration among researchers, managers, and a fishing organization may also have allayed angler and media concerns. The process embodied in these workshops is offered as a successful example of multi-agency, multi-sector collaboration to facilitate information acquisition and guide action to address a regional fisheries management issue.

Conference Paper↗