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USGS2015

The effects of heterospecifics and climatic conditions on incubation behavior within a mixed-species colony

Parental incubation behavior largely influences nest survival, a critical demographic process in avian population dynamics, and behaviors vary across species with different life history breeding strategies. Although research has identified nest survival advantages of mixing colonies, behavioral mechanisms that might explain these effects is largely lacking. We examined parental incubation behavior using video-monitoring techniques on Alcatraz Island, California, of black-crowned night-heron Nycticorax nycticorax (hereinafter, night-heron) in a mixed-species colony with California gulls Larus californicus and western gulls L. occidentalis . We first quantified general nesting behaviors (i.e. incubation constancy, and nest attendance), and a suite of specific nesting behaviors (i.e. inactivity, vigilance, preening, and nest maintenance) with respect to six different daily time periods. We employed linear mixed effects models to investigate environmental and temporal factors as sources of variation in incubation constancy and nest attendance using 211 nest days across three nesting seasons (2010–2012). We found incubation constancy (percent of time on the eggs) and nest attendance (percent of time at the nest) were lower for nests that were located < 3 m from one or more gull nest, which indirectly supports the predator protection hypothesis, whereby heterospecifics provide protection allowing more time for foraging and other self-maintenance activities. To our knowledge, this is the first empirical evidence of the influence of one nesting species on the incubation behavior of another. We also identified distinct differences between incubation constancy and nest attentiveness, indicating that these biparental incubating species do not share similar energetic constraints as those that are observed for uniparental species. Additionally, we found that variation in incubation behavior was a function of temperature and precipitation, where the strength of these effects was dependent on the time of day. Overall, these findings strengthen our understanding of incubation behavior and nest ecology of a colonial-nesting species.

California↗

USGS2020

High‐resolution dynamically downscaled rainfall and temperature projections for ecological life zones within Puerto Rico and for the U.S. Virgin Islands

The weather research and forecasting (WRF) model and a combination of the regional spectral model (RSM) and the Japanese Meteorological Agency Non‐Hydrostatic Model (NHM) were used to dynamically downscale selected CMIP5 global climate models to provide 2‐km projections with hourly model output for Puerto Rico and the U.S. Virgin Islands. Two 20‐year time slices were downscaled for historical (1986–2005) and future (2041–2060) periods following RCP8.5. Projected changes to mean and extreme temperature and precipitation were quantified for Holdridge life zones within Puerto Rico and for the U.S. Virgin Islands. The evaluation reveals a persistent cold bias for all islands in the U.S. Caribbean, a dry bias across Puerto Rico, and a wet bias on the windward side of mountains within the U.S. Virgin Islands. Despite these biases, model simulations show a robust drying pattern for all islands that is generally larger for Puerto Rico (25% annual rainfall reduction for some life zones) than the U.S. Virgin Islands (12% island average). The largest precipitation reductions are found during the more convectively active afternoon and evening hours. Within Puerto Rico, the model uncertainty increases for the wetter life zones, especially for precipitation. Across the life zones, both models project unprecedented maximum and minimum temperatures that may exceed 200 days annually above the historical baseline with only small changes to the frequency of extreme rainfall. By contrast, in the U.S. Virgin Islands, there is no consensus on the location of the largest drying relative to the windward and leeward side of the islands. However, the models project the largest increases in maximum temperature on the southern side of St. Croix and in higher elevations of St. Thomas and St. John.

Puerto Rico↗

USGS2001

Atmospheric regime of dust and salt through 75,000 years of Taylor Dome ice core: Refinement by measurement of major, minor, and trace metal suites

Measurement of absolute and relative amounts of dust and salt deposited in the polar ice record is central to several fields of study, including nutrient delivery, atmospheric deposition of trace elements, past wind strengths, dust provenance, and other aspects of climate and geochemical history. We present a method intended to give a more accurate picture than has been possible before of the total amounts and relative proportions of the dust and salt deposited by the atmosphere into polar ice. It also permits us to distinguish different compositional types of dust in the ice. The method is based on precise measurement of a suite of several metals whose proportions contrast strongly between dust and salt and vary substantially between dust types. We apply the method to a small suite of ice samples from the Taylor Dome core in coastal West Antarctica. In full glacial times, when total impurities were high and dust dominated over salt, wind strength in the West Antarctic region was apparently high, and extensive sea-ice cover prevented incorporation of salt into the atmospheric load. At the termination of the glacial period, increased salt in the dust-salt mixture indicates that sea ice diminished, but wind strength continued high, and unchanged dust composition indicates unchanged source areas. At about 10,000-11,000 y.B.P., sea-ice cover appears to have briefly returned to glacial conditions, but wind conditions remained in the milder postglacial condition. Soon after, sea ice retreated, and an abrupt change in dust composition indicates changed source materials or terranes. If extended by analysis of more samples from more sites, such information on salt and dust could provide firm constraints on past wind strengths, extent of sea-ice cover, deposition fluxes of salt and dust, and changing continental source areas of dust, for both polar regions of the Earth.

Journal of Geophysical Research D: Atmospheres↗

USGS2023

Assessment of potential recovery viability for Colorado Pikeminnow Ptychocheilus lucius in the Colorado River in Grand Canyon

Colorado Pikeminnow Ptychocheilus lucius, the Colorado River’s top native predatory fish, was historically distributed from the Gulf of California delta to the upper reaches of the Green, Colorado, and San Juan rivers in the Colorado River basin in the Southwestern US. In recent decades Colorado Pikeminnow population abundance has declined, primarily due to predation by warmwater nonnative fish and habitat modification following dam construction. Small, reproducing populations remain in the Green and upper Colorado rivers, but their current population trajectory is declining and the San Juan River population is maintained primarily through stocking. As such, establishment of an additional population could aid recovery efforts and increase the species’ resilience and population redundancy. The Colorado River in Grand Canyon once supported Colorado Pikeminnow, but until recently habitat suitability in this altered reach was considered low due to a depressed thermal regime and abundant nonnative predators. Climate change and ongoing drought has presented an opportunity to evaluate the feasibility of native fish restoration in a system where declining reservoir storage has led to warmer releases and re-emergence of riverine habitat. These changes in the physical attributes of the river have occurred in concert with a system-wide decline in nonnative predators. Conditions ten years ago were not compatible with reintroduction feasibility in Grand Canyon; however, due to rapidly changing conditions an expert Science Panel was convened to evaluate whether the physical and biological attributes of this reach could now support various life stages of Colorado Pikeminnow. Here, we report on the evaluation process and outcome from the Science Panel, which developed a science-based recommendation to the U.S. Fish and Wildlife Service on reintroduction feasibility. The Science Panel concluded that current habitat attributes in Grand Canyon could satisfy some, but perhaps not all, Colorado Pikeminnow life history requirements. This reach has the potential to support adult and sub-adult growth, foraging, migrations, and spawning, but low juvenile survival may limit recruitment. However, populations of other native species are successfully reproducing and increasing in western Grand Canyon, even in areas once considered suboptimal habitat. Should managers decide to move to the next phase of this process, actions such as experimental stocking and monitoring, telemetry studies, bioenergetics modeling, and laboratory-based research may provide additional information to further evaluate a potential reintroduction effort in this rapidly changing but highly altered system.

Arizona↗

USGS2015

Spatially explicit modeling of blackbird abundance in the Prairie Pothole Region

Knowledge of factors influencing animal abundance is important to wildlife biologists developing management plans. This is especially true for economically important species such as blackbirds (Icteridae), which cause more than $100 million in crop damages annually in the United States. Using data from the North American Breeding Bird Survey, the National Land Cover Dataset, and the National Climatic Data Center, we modeled effects of regional environmental variables on relative abundance of 3 blackbird species (red-winged blackbird, Agelaius phoeniceus ; yellow-headed blackbird, Xanthocephalus xanthocephalus ; common grackle, Quiscalus quiscula ) in the Prairie Pothole Region of the central United States. We evaluated landscape covariates at 3 logarithmically related spatial scales (1,000 ha, 10,000 ha, and 100,000 ha) and modeled weather variables at the 100,000-ha scale. We constructed models a priori using information from published habitat associations. We fit models with WinBUGS using Markov chain Monte Carlo techniques. Both landscape and weather variables contributed strongly to predicting blackbird relative abundance (95% credibility interval did not overlap 0). Variables with the strongest associations with blackbird relative abundance were the percentage of wetland area and precipitation amount from the year before bird surveys were conducted. The influence of spatial scale appeared small—models with the same variables expressed at different scales were often in the best model subset. This large-scale study elucidated regional effects of weather and landscape variables, suggesting that management strategies aimed at reducing damages caused by these species should consider the broader landscape, including weather effects, because such factors may outweigh the influence of localized conditions or site-specific management actions. The regional species distributional models we developed for blackbirds provide a tool for understanding these broader landscape effects and guiding wildlife management practices to areas that are optimally beneficial. Published 2015. This article is a U.S. Government work and is in the public domain in the USA.

Iowa, Minnesotta, Montana, Nebraska, North Dakota↗

USGS2011

Data logging of body temperatures provides precise information on phenology of reproductive events in a free-living arctic hibernator

Precise measures of phenology are critical to understanding how animals organize their annual cycles and how individuals and populations respond to climate-induced changes in physical and ecological stressors. We show that patterns of core body temperature ( T b ) can be used to precisely determine the timing of key seasonal events including hibernation, mating and parturition, and immergence and emergence from the hibernacula in free-living arctic ground squirrels ( Urocitellus parryii ). Using temperature loggers that recorded T b every 20 min for up to 18 months, we monitored core T b from three females that subsequently gave birth in captivity and from 66 female and 57 male ground squirrels free-living in the northern foothills of the Brooks Range Alaska. In addition, dates of emergence from hibernation were visually confirmed for four free-living male squirrels. Average T b in captive females decreased by 0.5–1.0°C during gestation and abruptly increased by 1–1.5°C on the day of parturition. In free-living females, similar shifts in T b were observed in 78% ( n = 9) of yearlings and 94% ( n = 31) of adults; females without the shift are assumed not to have given birth. Three of four ground squirrels for which dates of emergence from hibernation were visually confirmed did not exhibit obvious diurnal rhythms in T b until they first emerged onto the surface when T b patterns became diurnal. In free-living males undergoing reproductive maturation, this pre-emergence euthermic interval averaged 20.4 days ( n = 56). T b -loggers represent a cost-effective and logistically feasible method to precisely investigate the phenology of reproduction and hibernation in ground squirrels.

Journal of Comparative Physiology B: Biochemical, ↗

USGS2024

Improved efficient physics-based computational modeling of regional wave-driven coastal flooding for reef-lined coastlines

Coastal flooding affects low-lying communities worldwide and is expected to increase with climate change, especially along reef-lined coasts, where wave-driven flooding is particularly prevalent. However, current regional modeling approaches are either insufficient or too computationally expensive to accurately assess risks in these complex environments. This study introduces and validates an improved computationally efficient and physics-based approach to compute dynamic wave-driven regional flooding on reef-lined coasts. We coupled a simplified-physics flood model (SFINCS) with a one-dimensional wave transformation model (XBeach-1D). To assess the performance of the proposed approach, we compared its results with results from a fully resolving two-dimensional wave transformation model (XBeach-2D). We applied this approach for a range of storms and sea-level rise scenarios for two contrasting reef-lined coastal geomorphologies: one low relief area and one high relief area. Our findings reveal that SFINCS coupled with XBeach-1D generates flood extents comparable to those produced by XBeach-2D, with a hit rate of 92%. However, this method tends to underpredict the flood extent of weaker, high-frequency storms and overpredict stronger, low-frequency storms. Across scenarios, our approach overpredicted the mean flood water depth, with a positive bias of 7 cm and root mean square difference of 15 cm. Offering approximately 100 times greater computational efficiency than its two-dimensional XBeach counterpart, this flood modeling technique is recommended for wave-driven flood modeling in scenarios with high computational demands, such as modeling numerous scenarios or undertaking detailed regional-scale modeling.

Journal of Marine Science & Engineering↗

USGS2022

Breeding dynamics of gopher frog metapopulations over 10 years

Populations of amphibians that breed in isolated, ephemeral wetlands may be particularly sensitive to breeding and recruitment rates, which can be influenced by dynamic and difficult-to-predict extrinsic factors. The gopher frog Rana capito is a declining species currently proposed for listing under the U.S. Endangered Species Act, as well as one of many pond-breeding amphibians of conservation concern in the southeastern United States. To represent gopher frog breeding dynamics, we applied an occupancy modeling framework that integrated multiple data sets collected across the species' range to 1) estimate the influence of climate, habitat, and other factors on wetland-specific seasonal breeding probabilities; and 2) use those estimates to characterize seasonal, annual, and regional breeding patterns over a 10-y period. Breeding probability at a wetland was positively influenced by seasonal precipitation (Standardized Precipitation Index) and negatively influenced by fish presence. We found some evidence that the amount of suitable habitat surrounding a wetland was positively correlated with breeding probability during drought conditions. The percentage of sampled wetlands ( N = 192) predicted to have breeding varied seasonally, annually, and regionally across the study. Within-year temporal patterns of breeding differed across the range: in most locations north of Florida, peaks of breeding occurred in winter and spring months; whereas breeding was more dispersed throughout the year in Florida. Peaks of breeding across the 10-y period often occurred during or in the season following high rainfall events (e.g., hurricanes). These results have direct applications for site-level management that aims to increase successful breeding opportunities of gopher frogs and other associated pond-breeding amphibians, including monitoring protocol and intensity, removal of fish, and improving terrestrial habitat conditions surrounding wetlands (e.g., via tree or shrub removal and prescribed fire). The results also have implications for better-informed management through the closer alignment of breeding activity monitoring with predicted seasonal peaks. Furthermore, estimates of breeding frequency can be incorporated into population viability analyses to inform forthcoming assessments of extinction risk and designation of the species' conservation status by the U.S. Fish and Wildlife Service.

Alabama, Florida, Georgia, North Carolina, South C↗

USGS2016

Assessment of error rates in acoustic monitoring with the R package monitoR

Detecting population-scale reactions to climate change and land-use change may require monitoring many sites for many years, a process that is suited for an automated system. We developed and tested monitoR, an R package for long-term, multi-taxa acoustic monitoring programs. We tested monitoR with two northeastern songbird species: black-throated green warbler ( Setophaga virens ) and ovenbird ( Seiurus aurocapilla ). We compared detection results from monitoR in 52 10-minute surveys recorded at 10 sites in Vermont and New York, USA to a subset of songs identified by a human that were of a single song type and had visually identifiable spectrograms (e.g. a signal:noise ratio of at least 10 dB: 166 out of 439 total songs for black-throated green warbler, 502 out of 990 total songs for ovenbird). monitoR’s automated detection process uses a ‘score cutoff’, which is the minimum match needed for an unknown event to be considered a detection and results in a true positive, true negative, false positive or false negative detection. At the chosen score cut-offs, monitoR correctly identified presence for black-throated green warbler and ovenbird in 64% and 72% of the 52 surveys using binary point matching, respectively, and 73% and 72% of the 52 surveys using spectrogram cross-correlation, respectively. Of individual songs, 72% of black-throated green warbler songs and 62% of ovenbird songs were identified by binary point matching. Spectrogram cross-correlation identified 83% of black-throated green warbler songs and 66% of ovenbird songs. False positive rates were for song event detection.

Bioacoustics: The International Journal of Animal ↗

USGS2024

Canopy cover and microtopography control precipitation-enhanced thaw of ecosystem-protected permafrost

Northern high-latitudes are projected to get warmer and wetter, which will affect rates of permafrost thaw and mechanisms by which thaw occurs. To better understand the impact of rain, as well as other factors such as snow depth, canopy cover, and microtopography, we instrumented a degrading permafrost plateau in south-central Alaska with high-resolution soil temperature sensors. The site contains ecosystem-protected permafrost, which persists in unfavorable climates due to favorable ecologic conditions. Our study (2020–2022) captured three of the snowiest years and three of the four wettest years since the site was first studied in 2015. Average thaw rates along an across-site transect increased nine-fold from 6 ± 5 cm yr −1 (2015–2020) to 56 ± 12 cm yr −1 (2020–2022). This thaw was not uniform. Hummock locations, residing on topographic high points with relatively dense canopy, experienced only 8 ± 9 cm yr −1 of thaw, on average. Hollows, topographic low points with low canopy cover, and transition locations, which had canopy cover and elevation between hummocks and hollows, thawed 44 ± 6 cm yr −1 and 39 ± 13 cm yr −1 , respectively. Mechanisms of thaw differed between these locations. Hollows had high warm-season soil moisture, which increased thermal conductivity, and deep cold-season snow coverage, which insulated soil. Transition locations thawed primarily due to thermal energy transported through subsurface taliks during individual rain events. Most increases in depth to permafrost occurred below the ∼45 cm thickness seasonally frozen layer, and therefore, expanded existing site taliks. Results highlight the importance of canopy cover and microtopography in controlling soil thermal inputs, the ability of subsurface runoff from individual rain events to trigger warming and thaw, and the acceleration of thaw caused by consecutive wet and snowy years. As northern high-latitudes become warmer and wetter, and weather events become more extreme, the importance of these controls on soil warming and thaw is likely to increase.

Alaska↗

USGS2014

Standardized phenology monitoring methods to track plant and animal activity for science and resource management applications

Phenology offers critical insights into the responses of species to climate change; shifts in species’ phenologies can result in disruptions to the ecosystem processes and services upon which human livelihood depends. To better detect such shifts, scientists need long-term phenological records covering many taxa and across a broad geographic distribution. To date, phenological observation efforts across the USA have been geographically limited and have used different methods, making comparisons across sites and species difficult. To facilitate coordinated cross-site, cross-species, and geographically extensive phenological monitoring across the nation, the USA National Phenology Network has developed in situ monitoring protocols standardized across taxonomic groups and ecosystem types for terrestrial, freshwater, and marine plant and animal taxa. The protocols include elements that allow enhanced detection and description of phenological responses, including assessment of phenological “status”, or the ability to track presence–absence of a particular phenophase, as well as standards for documenting the degree to which phenological activity is expressed in terms of intensity or abundance. Data collected by this method can be integrated with historical phenology data sets, enabling the development of databases for spatial and temporal assessment of changes in status and trends of disparate organisms. To build a common, spatially, and temporally extensive multi-taxa phenological data set available for a variety of research and science applications, we encourage scientists, resources managers, and others conducting ecological monitoring or research to consider utilization of these standardized protocols for tracking the seasonal activity of plants and animals.

International Journal of Biometeorology↗

USGS2007

Spatial variability in water-balance model performance in the conterminous United States

A monthly water-balance (WB) model was tested in 44 river basins from diverse physiographic and climatic regions across the conterminous United States (U.S.). The WB model includes the concepts of climatic water supply and climatic water demand, seasonality in climatic water supply and demand, and soil-moisture storage. Exhaustive search techniques were employed to determine the optimal set of precipitation and temperature stations, and the optimal set of WB model parameters to use for each basin. It was found that the WB model worked best for basins with: (1) a mean elevation less than 450 meters or greater than 2000 meters, and/or (2) monthly runoff that is greater than 5 millimeters (mm) more than 80 percent of the time. In a separate analysis, a multiple linear regression (MLR) was computed using the adjusted R-square values obtained by comparing measured and estimated monthly runoff of the original 44 river basins as the dependent variable, and combinations of various independent variables [streamflow gauge latitude, longitude, and elevation; basin area, the long-term mean and standard deviation of annual precipitation; temperature and runoff; and low-flow statistics (i.e., the percentage of months with monthly runoff that is less than 5 mm)]. Results from the MLR study showed that the reliability of a WB model for application in a specific region can be estimated from mean basin elevation and the percentage of months with gauged runoff less than 5 mm. The MLR equations were subsequently used to estimate adjusted R-square values for 1,646 gauging stations across the conterminous U.S. Results of this study indicate that WB models can be used reliably to estimate monthly runoff in the eastern U.S., mountainous areas of the western U.S., and the Pacific Northwest. Applications of monthly WB models in the central U.S. can lead to uncertain estimates of runoff.

Conterminous United States↗

USGS2022

An integrated approach for physical, economic, and demographic evaluation of coastal flood hazard adaptation in Santa Monica Bay, California

The increased risk of coastal flooding associated with climate-change driven sea level rise threatens to displace communities and cause substantial damage to infrastructure. Site-specific adaptation planning is necessary to mitigate the negative impacts of flooding on coastal residents and the built environment. Cost-benefit analyses used to evaluate coastal adaption strategies have traditionally focused on economic considerations, often overlooking potential demographic impacts that can directly influence vulnerability in coastal communities. Here, we present a transferable framework that couples hydrodynamic modeling of flooding driven by sea level rise and storm scenarios with site-specific building stock and census block-level demographic data. We assess the efficacy of multiple coastal adaptation strategies at reducing flooding, economic damages, and impacts to the local population. We apply this framework to evaluate a range of engineered, nature-based, and hybrid adaptation strategies for a portion of Santa Monica Bay, California. Overall, we find that dual approaches that provide protection along beaches using dunes or seawalls and along inlets using sluice gates perform best at reducing or eliminating flooding, damages, and population impacts. Adaptation strategies that include a sluice gate and partial or no protection along the beach are effective at reducing flooding around inlets but can exacerbate flooding elsewhere, leading to unintended impacts on residents. Our results also indicate trade-offs between economic and social risk-reduction priorities. The proposed framework allows for a comprehensive evaluation of coastal protection strategies across multiple objectives. Understanding how coastal adaptation strategies affect hydrodynamic, economic, and social factors at a local scale can enable more effective and equitable planning approaches.

California↗

USGS2002

Valley floor climate observations from the McMurdo dry valleys, Antarctica, 1986-2000

Climate observations from the McMurdo dry valleys, East Antarctica are presented from a network of seven valley floor automatic meteorological stations during the period 1986 to 2000. Mean annual temperatures ranged from -14.8??C to -30.0??C, depending on the site and period of measurement. Mean annual relative humidity is generally highest near the coast. Mean annual wind speed increases with proximity to the polar plateau. Site-to-site variation in mean annual solar flux and PAR is due to exposure of each station and changes over time are likely related to changes in cloudiness. During the nonsummer months, strong katabatic winds are frequent at some sites and infrequent at others, creating large variation in mean annual temperature owing to the warming effect of the winds. Katabatic wind exposure appears to be controlled to a large degree by the presence of colder air in the region that collects at low points and keeps the warm less dense katabatic flow from the ground. The strong influence of katabatic winds makes prediction of relative mean annual temperature based on geographical position (elevation and distance from the coast) alone, not possible. During the summer months, onshore winds dominate and warm as they progress through the valleys creating a strong linear relationship (r2 = 0.992) of increasing potential temperature with distance from the coast (0.09??C km-1). In contrast to mean annual temperature, summer temperature lends itself quite well to model predictions, and is used to construct a statistical model for predicting summer dry valley temperatures at unmonitored sites. Copyright 2002 by the American Geophysical Union.

Journal of Geophysical Research D: Atmospheres↗

USGS2006

Shrinking ponds in subarctic Alaska based on 1950-2002 remotely sensed images

Over the past 50 years, Alaska has experienced a warming climate with longer growing seasons, increased potential evapotranspiration, and permafrost warming. Research from the Seward Peninsula and Kenai Peninsula has demonstrated a substantial landscape-level trend in the reduction of surface water and number of closed-basin ponds. We investigated whether this drying trend occurred at nine other regions throughout Alaska. One study region was from the Arctic Coastal Plain where depp permafrost occurs continuously across the landscape. The other eight study regions were from the boreal forest regions where discontinuous permafrost occurs. Mean annual precipitation across the study regions ranged from 100 to over 700 min yr-1. We used remotely sensed imagery from the 1950s to 2002 to inventory over 10,000 closed-basin ponds from at least three periods from this time span. We found a reduction in the area and number of shallow, closed-basin ponds for all boreal regions. In contrast, the Arctic Coastal Plain region had negligible change in the area of closed-basin ponds. Since the 1950s, surface water area of closed-basin ponds included in this analysis decreased by 31 to 4 percent, and the total number of closed-basin ponds surveyed within each study region decreased from 54 to 5 percent. There was a significant increasing trend in annual mean temperature and potential evapotranspiration since the 1950s for all study regions. There was no significant trend in annual precipitation during the same period. The regional trend of shrinking ponds may be due to increased drainage as permafrost warms, or increased evapotranspiration during a warmer and extended growing season. Copyright 2006 by the American Geophysical Union.

Journal of Geophysical Research G: Biogeosciences↗

USGS2020

Effects of montane watershed development on vulnerability of domestic groundwater supply during drought

Climate change is expected to reduce recharge to montane aquifers in the western United States, but it is unclear how this will impact groundwater resources in watersheds where intensive surface-water development has disrupted the natural hydrologic regime. To better understand sources of recharge and associated vulnerabilities of groundwater supply in this setting, we made a detailed geochemical survey of domestic wells finished in fractured bedrock throughout the Yuba and Bear River watersheds (Sierra Nevada foothills, northern California)during historic drought (2015–2016). Stable isotopes of water and noble gas recharge temperatures closely tracked atmospheric lapse rates across a broad elevation gradient (100–2000 m), indicating groundwater inputs are dominated by local precipitation that rapidly recharges fractured bedrock during the winter wet-season. However, nearly one-quarter of wells had water isotopes that were fractionated by evaporation and warm recharge temperatures, indicative of mixing with dry-season recharge by surface water. Monte Carlo mixing models suggest evaporation-impacted groundwater samples are mixtures of local rain with an average of 28% ± 13% from diverted surface water that can recharge bedrock aquifers during the dry-season by either irrigation return flow or seepage from extensive distribution infrastructure. Wells that received recharge subsidies from diverted surface water had elevated levels of nitrate and coliform bacteria compared to those replenished exclusively by local precipitation, which are more vulnerable to supply shortage during drought. It is important to consider the impacts of increased surface-water development on the quantity and quality of groundwater recharge in rapidly developing montane watersheds.

California↗

USGS2023

Machine-learning model to delineate sub-surface agricultural drainage from satellite imagery

Knowing subsurface drainage (tile-drain) extent is integral to understanding how landscapes respond to precipitation events and subsequent days of drying, as well as how soil characteristics and land management influence stream response. Consequently, a time series of tile-drain extent would inform one aspect of land management that complicates our ability to explain streamflow and water-quality as a function of climate variability or conservation management. We trained a UNet machine-learning model, a convolutional neural network designed to highlight objects of interest within an image, to delineate tile-drain networks in panchromatic satellite imagery without additional data on soils, topography, or historical tile-drain extent. This was done by training the model to match the accuracy of human experts manually tracing the surface representation of tile drains in satellite imagery. Our approach began with a library of images that were used to train and quantify the accuracy of the model, with model performance tested on imagery from two areas that were not used to train the model. Satellite imagery included acquisition dates from 2008 to 2020. Training imagery was from agricultural areas within the US Great Lakes basin. Validation imagery was from the upper Maumee River, tributary to western Lake Erie, and an Indiana, Ohio-River headwater tributary. Our analysis of the satellite imagery paired with meteorological and soil data found that during spring, a combination of relatively high solar radiation, intermediate soil-water content and bare fields enabled the best model performance. Each area of interest was heavily tile-drained, where better understanding the movement of water, nutrients, and sediment from fields to downstream water bodies is key to managing harmful algal blooms and hypoxia. The trained UNet model successfully identified tile drains visible in the validation imagery with an accuracy of 93%–96% and balanced accuracy of 52%–54%, similar to performance for training data (95% and 63%, respectively). Model performance will benefit from ongoing contributions to the training library.

Indiana, Michigan, Ohio, Wisconsin↗

USGS2022

Multi-decadal simulation of marsh topography evolution under sea level rise and episodic sediment loads

Coastal marsh within Mediterranean climate zones is exposed to episodic watershed runoff and sediment loads that occur during storm events. Simulating future marsh accretion under sea level rise calls for attention to: (a) physical processes acting over the time scale of storm events and (b) biophysical processes acting over time scales longer than storm events. Using the upper Newport Bay in Southern California as a case study, we examine the influence of event-scale processes on simulated change in marsh topography by comparing: (a) a biophysical model that integrates with an annual time step and neglects event-scale processes (BP-Annual), (b) a physical model that resolves event-scale processes but neglects biophysical interactions (P-Event), and (c) a biophysical model that resolves event-scale physical processes and biophysical processes at annual and longer time scales (BP-Event). A calibrated BP-Event model shows that large (>20-year return period) episodic storm events are major drivers of marsh accretion, depositing up to 30 cm of sediment in one event. Greater deposition is predicted near fluvial sources and tidal channels and less on marshes further from fluvial sources and tidal channels. In contrast, the BP-Annual model poorly resolves spatial structure in marsh accretion as a consequence of neglecting event-scale processes. Furthermore, the P-Event model significantly overestimates marsh accretion as a consequence of neglecting marsh surface compaction driven by annual scale biophysical processes. Differences between BP-Event and BP-Annual models translate up to 20 cm per century in marsh surface elevation.

California↗