Geology Reports⌕ Search

SEARCH · Geology Reports

Results for “Biological Report”

Search indexed USGS publications on groundwater, aquifers, geologic maps, mineral resources and earthquakes. Explore source records by subject and place.

Quote a phrase for an exact phrase match. Source license links do not imply unrestricted reuse.

At least 1,333 records · Page 74Linked to original sources

Chronic wasting disease—Status, science, and management support by the U.S. Geological Survey

The U.S. Geological Survey (USGS) investigates chronic wasting disease (CWD) at multiple science centers and cooperative research units across the Nation and supports the management of CWD through science-based strategies. CWD research conducted by USGS scientists has three strategies: (1) to understand the biology, ecology, and causes and distribution of CWD; (2) to assess and predict the spread and persistence of CWD in wildlife and the environment; and (3) to develop tools for early detection, diagnosis, surveillance, and control of CWD.

Open-File Report↗

Analysis of meteorological data and water chemistry of Latir Lakes, Taos County, New Mexico, 1985-88

Data were analyzed to determine the chemistry of atmospheric deposition and water of the Latir Lakes in Taos County New Mexico, from 1985 to 1988. The Latir Lakes consist of a series of nine paternoster lakes that range in altitude from 11,061 to 11,893 feet above sea level. The pH of wet precipitation generally ranged from 4.6 to 5.5 and the specific conductance of wet precipitation ranged from 1 to 18 microsiemens per centimeter at 25 degrees Celsius from December 1985 through September 1988. Snowpack chemistry data indicate a change in the specific conductance, pH, and alkalinity of the snowpack from month to month. The dominant cation in the snowpack is calcium, and the dominant anions are nitrate and sulfate. The samples having the smallest values of specific conductance generally did not contain measurable alkalinity. When the snowpack starts to melt in the spring, specific conductance of the entire snowpack decreases, consistent with the hypothesis that the initial fluid draining from the snowpack transports a large amount of dissolved material out of the snowpack. Water chemistries in the Latir Lakes are similar although specific conductance increases downstream from lake 9 to lake 1. Calcium is the dominant cation and the ions that produce alkalinity are the dominant anions. Concentrations of sodium, magnesium, chloride, and sulfate do not vary substantially from year to year or during the year in a particular lake. Alkalinity and calcium concentration, however, do vary from year to year and during the year. The pH of outflow from the Latir Lakes varies from lake to lake and from year to year. In 1986, the range in pH in the lakes was less than 1 unit in mid-June, but was greater than 2.5 units by late October. The pH generally was larger than 7.0 in all of the lakes and was as large as 9.9 in several of the lakes during the period of study. The pH of outflow water generally increases from early spring to late summer in the Latir Lakes, and snowmelt does not seem to cause the pH to decrease in the lakes. Depth profiles of selected lakes indicate that the dissolved-oxygen concentration approaches zero below the thermocline. This suggests biological oxidation of organic matter in the lower zones in these lakes. Because many organisms cannot live in water containing small dissolved-oxygen concentrations, large volumes of water in lakes 9 and 3 probably are not suitable for habitation during the summer months.

Water-Resources Investigations Report↗

Examining the mechanisms of species responses to climate change: Are there biological thresholds?

Climate-change-driven shifts in distribution and abundance have been documented in many species. However, in order to better predict species responses, managers are seeking to understand the mechanisms that are driving these changes, including any thresholds that might soon be crossed. Leveraging the research that has already been supported by the Northeast Climate Adaptation Science Center and its partners, this project used the latest modeling techniques combined with robust field data to examine the impact of specific climate variables, land use change, and species interactions on the future distribution and abundance of species of conservation concern. Moreover, this project documented biological thresholds related to climate variability and change for critical species in the Northeastern and Midwestern U.S. Specifically, our objectives were to identify the primary drivers (climate change vs. urban growth) of species distribution changes in the Northeast; examine the nature of species landscape capability change over time to identify potential thresholds; determine how changing temperatures and snowpack characteristics will drive species interactions; analyze the sensitivity of tree and bird responses to the magnitude, variability, periodicity, and seasonality of temperature and precipitation under climate change in the eastern U.S.; and identify how discrete climate triggers such as extreme events will correlate with known biological thresholds. Major outcomes included 1) refining the understanding of the mechanisms that drive projected changes in the distribution of vulnerable populations; and 2) improving how these results are conveyed to stakeholders by identifying understandable responses in the form of thresholds.

Connecticut, Delaware, Illinois, Indiana, Iowa, Ke↗

Water-quality data for Arvada Reservoir, Denver metropolitan area, Colorado

Physical, chemical, and biological water quality data were collected and compiled for five sites in Arvada Reservoir, one site in Ralston Creek, and two sites in Croke Canal, in the Denver metropolitan area, Colorado. The purpose of the data collection was to determine the water quality of Arvada Reservoir, evaluate the effect of source waters on the reservoir , and determine the trophic state of the reservoir. Data collected include reservoir profile measurements with depth and inflow measurements of water temperature, specific conductance, dissolved oxygen, and pH. Secchi disk depth measurements also are reported. In addition, water samples were analyzed periodically for concentrations of major chemical constituents, nutrients, trace elements, and selected radiochemicals; for densities and relative abundance of phytoplankton and zooplankton; and for concentrations of chlorophyll alpha. Results of algal growth potential determinations are included. This report describes sampling site locations and methods of data collection and analyses and presents qualitative and quantitative results of water quality data collected during the study. Sampling began during June 1983 and continued through September 1985. (USGS)

Open-File Report↗

Growth and survival rates of dispersing free embryos and settled larvae of pallid sturgeon (Scaphirhynchus albus) in the Missouri River, Montana and North Dakota

We released nearly 1.0 million 1-day post-hatch (dph) and 5-dph pallid sturgeon ( Scaphirhynchus albus ) free embryos in the Missouri River on 1 July 2019 and sequentially captured survivors at multiple sites through a 240-km river reach to quantify daily growth and survival rates during the early life stages. Genetic analysis was used to assign captured fish to released family lots and known ages. Growth rate was similar (0.74–0.75 mm day −1 ) between the 1- and 5-dph age groups during the 3–4-day dispersal period when water temperature averaged 16.8 °C. Daily survival rate was 0.64 during 1–4 dph for the original 1-dph age group and 0.80 during 5–7 dph for the original 5-dph age group. Total survival during free embryo dispersal (hatch to 9 dph) was estimated as 0.0437. The transition from dispersing as free embryos to settling as benthic larvae was verified for fish originally released as 5 dph. Growth of settled larvae was quantified with a Gompertz model through 75 dph (9 September; 112 mm) when water temperature was 18.8–21.0 °C in the rearing areas. Settled larvae had an estimated daily survival rate of 0.96, and estimated total survival during 9–75 dph was 0.0714. This study provides the first empirical survival estimates for pallid sturgeon early life stages in natural settings and is one of few studies reporting similar information for other sturgeon species. Applications of this work extend to pallid sturgeon restoration programs where population models are being developed to predict recruitment potential and population responses to river management alternatives.

Montana, North Dakota↗

Stratifying ocean sampling globally and with depth to account for environmental variability

With increasing depth, the ocean is less sampled for physical, chemical and biological variables. Using the Global Marine Environmental Datasets (GMED) and Ecological Marine Units (EMUs) , we show that spatial variation in environmental variables decreases with depth. This is also the case over temporal scales because seasonal change, surface weather conditions, and biological activity are highest in shallow depths. A stratified sampling approach to ocean sampling is therefore proposed whereby deeper environments, both pelagic and benthic, would be sampled with relatively lower spatial and temporal resolutions. Sampling should combine measurements of physical and chemical parameters with biological species distributions, even though species identification is difficult to automate. Species distribution data are essential to infer ecosystem structure and function from environmental data. We conclude that a globally comprehensive, stratification-based ocean sampling program would be both scientifically justifiable and cost-effective.

Scientific Reports↗

Fort Collins Science Center

The U.S. Geological Survey's Fort Collins Science Center (FORT) is one of 17 USGS biological science centers nationwide. FORT conducts research and develops technical applications to assist land managers in understanding and managing biological resources, habitats, and ecosystems. Although the majority of FORT's activities are conducted within the 15-state Central Region of the USGS, many FORT projects are national or international in scope. FORT serves all Department of the Interior land management bureaus and other natural resource agencies. In addition, FORT scientists partner with DOI and other federal entities such as CDC, DOE, EPA, NASA, NIH, and USDA to share expertise and resources. FORT also partners with several universities and works cooperatively with states and nongovernmental organizations. Products and services include reports and publications, predictive models and software, maps and GIS products, and other technical assistance in the form of meetings, workshops, training, field visits, and needs assessments.

Fact Sheet↗

Predicting water quality by relating secchi-disk transparency and chlorophyll a measurements to Landsat satellite imagery for Michigan inland lakes, 2001-2006

The State of Michigan has more than 11,000 inland lakes; approximately 3,500 of these lakes are greater than 25 acres. The USGS, in cooperation with the Michigan Department of Environmental Quality (MDEQ), has been monitoring the quality of inland lakes in Michigan through the Lake Water Quality Assessment monitoring program. Approximately 100 inland lakes will be sampled per year from 2001 to 2015. Volunteers coordinated by MDEQ started sampling lakes in 1974, and continue to sample to date approximately 250 inland lakes each year through the Cooperative Lakes Monitoring Program (CLMP), Michigan’s volunteer lakes monitoring program. Despite this sampling effort, it is still impossible to physically collect the necessary water-quality measurements for all 3,500 Michigan inland lakes. Therefore, a technique was used by USGS, modeled after Olmanson and others (2001), in cooperation with MDEQ that uses satellite remote sensing to predict water quality in unsampled inland lakes greater than 25 acres. Water-quality characteristics that are associated with water clarity can be predicted for Michigan inland lakes by relating sampled measurements of secchi-disk transparency (SDT) and chlorophyll a concentrations (Chl- a ), to satellite imagery. The trophic state index (TSI) which is an indicator of the biological productivity can be calculated based on SDT measurements, Chl- a concentrations, and total phosphorus (TP) concentrations measured near the lake’s surface. Through this process, unsampled inland lakes within the fourteen Landsat satellite scenes encompassing Michigan can be translated into estimated TSI from either predicted SDT or Chl- a (fig. 1).

Michigan↗

Methods of analysis by the U.S. Geological Survey National Water Quality Laboratory-Processing, taxonomy, and quality control of benthic macroinvertebrate samples

Qualitative and quantitative methods to process benthic macroinvertebrate (BMI) samples have been developed and tested by the U.S. Geological Survey?s National Water Quality Laboratory Biological Group. The qualitative processing method is based on visually sorting a sample for up to 2 hours. Sorting focuses on attaining organisms that are likely to result in taxonomic identifications to lower taxonomic levels (for example, Genus or Species). Immature and damaged organisms are also sorted when they are likely to result in unique determinations. The sorted sample remnant is scanned briefly by a second person to determine if obvious taxa were missed. The quantitative processing method is based on a fixed-count approach that targets some minimum count, such as 100 or 300 organisms. Organisms are sorted from randomly selected 5.1- by 5.1-centimeter parts of a gridded subsampling frame. The sorted remnant from each sample is resorted by a second individual for at least 10 percent of the original sort time. A large-rare organism search is performed on the unsorted remnant to sort BMI taxa that were not likely represented in the sorted grids. After either qualitatively or quantitatively sorting the sample, BMIs are identified by using one of three different types of taxonomic assessment. The Standard Taxonomic Assessment is comparable to the U.S. Environmental Protection Agency Rapid Bioassessment Protocol III and typically provides Genus- or Species-level taxonomic resolution. The Rapid Taxonomic Assessment is comparable to the U.S. Environmental Protection Agency Rapid Bioassessment Protocol II and provides Familylevel and higher taxonomic resolution. The Custom Taxonomic Assessment provides Species-level resolution whenever possible for groups identified to higher taxonomic levels by using the Standard Taxonomic Assessment. The consistent use of standardized designations and notes facilitates the interpretation of BMI data within and among water-quality studies. Taxonomic identifications are quality assured by verifying all referenced taxa and randomly reviewing 10 percent of the taxonomic identifications performed weekly by Biological Group taxonomists. Taxonomic errors discovered during this review are corrected. BMI data are reviewed for accuracy and completeness prior to release. BMI data are released phylogenetically in spreadsheet format and unprocessed abundances are corrected for laboratory and field subsampling when necessary.

Open-File Report↗

Some limnological aspects of 20 selected lakes in Eagan and Apple Valley, Minnesota

Selected physical, chemical, and biological parameters were determined to assess the quality of 20 lakes in the cities of Eagan and Apple Valley, Minn. All the lakes are eutrophic except Holland and Fish Lakes, which are mesotrophic. Some lakes (including Fish Lake) have storm sewer inlets but are not discernibly different in quality than lakes with no such inlets.

Minnesota↗

1978 Water Quality Laboratory services catalog

The information in this catalog is provided to assist field personnel in the selection of determinations, the estimation of costs, the calculation of sample volume requirements, the identification of the necessary sample treatment and in the evaluation of the precision of the laboratory data. The major section of the catalog is the table of determinations which includes the cost, required sample volume, sample treatment, and precision. This table is divided into three sections: Inorganic determinations, organic determinations, and biological determinations. The "Inorganic determinations" are subdivided into major ions, major nutrients, trace constituents, physical parameters, and radiochemical measurements. The "Organic determinations" are subdivided into gross measures, pesticides, and munition products. The "Biological determinations" are subdivided into gross measures, periphyton, phytoplankton and benthic invertebrates. Regardless of the outline form attempted, exceptions and gray areas were encountered. Generally, exceptions were placed into the groups based on a sample designation. As a result, frequent use of the index may be required until users become familiar with the catalog.

Open-File Report↗

Physical, chemical, and biological data for detailed study of irrigation drainage in the Klamath Basin, California and Oregon, 1990-92

Physical, chemical, and biological data were collected between 1990 and 1992 as part of a detailed study by the U.S. Department of Interior of the effects of irrigation drainage on aquatic resources in the Klamath Basin of California and Oregon. Most of the sites for data collection were in and around the upper and lower sump of Tule Lake, in the Tule Lake National Wildlife Refuge, and along major drains in Lower Klamath National Wildlife Refuge. The physical and chemical data consist of particle-size determinations and concentrations of carbon, mercury, arsenic, chlorophenoxy acid, and organochlorine, organophosphate, and carbamate pesticides in bottom sediment; and concentrations of organophosphate, carbamate, and pyrethroid pesticides, major and trace inorganic constituents, nitrogen, phosphorus, and organic carbon in water. Continuous dissolved oxygen, pH, specific conduc- tance, and temperature data from selected sites in 1991 and 1992 are presented in graphical form to summarize the diel water-quality conditions. The biological data consists of concentrations of inorganic constituents and organochlorine pesticides in tissue, invertebrate and fish population surveys, fish health surveys, frog call surveys, egg shell thickness of avian eggs, and in situ and static toxicity bioassay data collected in 1991 and 1992 using aquatic bacteria, plants, invertebrates, fish, and bird species as test organisms.

Open-File Report↗

Endocrine active chemicals and endocrine disruption in Minnesota streams and lakes: Implications for aquatic resources, 1994-2008

The U.S. Geological Survey, in cooperation with St. Cloud State University, Minnesota Department of Health, Minnesota Pollution Control Agency, Minnesota Department of Natural Resources, Metropolitan Council Environmental Services, and the University of Minnesota, has conducted field monitoring studies and laboratory research to determine the presence of endocrine active chemicals and the incidence of endocrine disruption in Minnesota streams and lakes during 1994–2008. Endocrine active chemicals are chemicals that interfere with the natural regulation of endocrine systems, and may mimic or block the function of natural hormones in fish or other organisms. This interference commonly is referred to as endocrine disruption. Indicators of endocrine disruption in fish include vitellogenin (female egg yolk protein normally expressed in female fish) in male fish, oocytes present in male fish testes, reduced reproductive success, and changes in reproductive behavior. The results from a series of studies during 1994–2008 demonstrate that endocrine active chemicals are present in Minnesota surface waters, indicating that aquatic organism exposure is likely. Endocrine active chemicals have been identified in wastewater-treatment plant effluent and surface waters downstream from discharge of wastewater-treatment plant effluent throughout Minnesota at low concentrations. Biological indicators of endocrine disruption have been detected in wild fish throughout Minnesota at sites directly downstream from wastewater-treatment plant effluent, indicating that endocrine active chemicals in effluent contribute to endocrine disruption in fish. This finding was confirmed in a controlled study exposing fathead minnows to wastewater-treatment plant effluent at an onsite fish exposure laboratory. During this controlled study, changes in biological responses coincided with changes in wastewater-treatment plant effluent composition demonstrating that effluent effects on fish endocrine systems are temporally variable. Although chemicals contributing to endocrine disruption in fish are complex, several laboratory studies have further confirmed that certain classes of chemicals, such as hormones and alkylphenols, which are components of wastewater-treatment plant effluent, affect the endocrine systems of fish through biochemical, structural, and behavioral disruption. Although these studies indicate that wastewater-treatment plant effluent is a conduit for endocrine active chemicals to surface waters, endocrine active chemicals also were present in surface waters with no obvious wastewater-treatment plant effluent sources. Endocrine active chemicals were detected and indicators of endocrine disruption in fish were measured at numerous sites upstream from discharge of wastewater-treatment plant effluent. These observations indicate that other unidentified sources of endocrine active chemicals exist, such as runoff from land surfaces, atmospheric deposition, inputs from onsite septic systems, or other groundwater sources. Alternatively, some endocrine active chemicals may not yet have been identified or measured. The presence of biological indicators of endocrine disruption in male fish indicates that the fish are exposed to endocrine active chemicals. However indicators of endocrine disruption in male fish does not indicate an effect on fish reproduction or changes in fish populations.

Minnesota↗

Snakes in the wrong places: Gordon Rodda’s career in invasive species research

When USGS research zoologist Gordon G. Rodda was a graduate student at Cornell University studying behavioral biology of alligators —or later, completing a post-doc at the Smithsonian Institute studying the social behavior of green iguanas in Venezuela or following that, as a statistics and sociobiology instructor at the University of Tennessee—he did not foresee that his professional future was in snakes. Lots of snakes, and in places they don’t belong.

Report↗

Fish stocking in protected areas: Summary of a workshop

Native and nonnative sport fish have been introduced into the majority of historically fishless lakes in wilderness, generating conflicts between managing wilderness as natural ecosystems and providing opportunities for recreation. Managers faced with controversial and difficult decisions about how to manage wilderness lakes may not always have ready access to research relevant to these decisions. To address this problem, and to expose scientists to the concerns and constraints of managers and wilderness users, a workshop was held in October 1998 at the Flathead Lake Biological Station in Polson, Montana. Participants included 43 scientists, state and federal managers, wilderness users and advocates and students. Four subject areas were addressed: federal, state, tribal and user perspectives, community and ecosystem effects, species effects and management recommendations. Papers from the workshop are being developed for an issue of the journal Ecosystems.

Proceedings↗

The United States National Climate Assessment - Alaska Technical Regional Report

The Alaskan landscape is changing, both in terms of effects of human activities as a consequence of increased population, social and economic development and their effects on the local and broad landscape; and those effects that accompany naturally occurring hazards such as volcanic eruptions, earthquakes, and tsunamis. Some of the most prevalent changes, however, are those resulting from a changing climate, with both near term and potential upcoming effects expected to continue into the future. Alaska's average annual statewide temperatures have increased by nearly 4°F from 1949 to 2005, with significant spatial variability due to the large latitudinal and longitudinal expanse of the State. Increases in mean annual temperature have been greatest in the interior region, and smallest in the State's southwest coastal regions. In general, however, trends point toward increases in both minimum temperatures, and in fewer extreme cold days. Trends in precipitation are somewhat similar to those in temperature, but with more variability. On the whole, Alaska saw a 10-percent increase in precipitation from 1949 to 2005, with the greatest increases recorded in winter. The National Climate Assessment has designated two well-established scenarios developed by the Intergovernmental Panel on Climate Change (Nakicenovic and others, 2001) as a minimum set that technical and author teams considered as context in preparing portions of this assessment. These two scenarios are referred to as the Special Report on Emissions Scenarios A2 and B1 scenarios, which assume either a continuation of recent trends in fossil fuel use (A2) or a vigorous global effort to reduce fossil fuel use (B1). Temperature increases from 4 to 22°F are predicted (to 2070-2099) depending on which emissions scenario (A2 or B1) is used with the least warming in southeast Alaska and the greatest in the northwest. Concomitant with temperature changes, by the end of the 21st century the growing season is expected to lengthen by 15-25 days in some areas of Alaska, with much of that corresponding with earlier spring snow melt. Future projections of precipitation (30-80 years) over Alaska show an increase across the State, with the largest changes in the northwest and smallest in the southeast. Because of increasing temperatures and growing season length, however, increased precipitation may not correspond with increased water availability, due to temperature related increased evapotranspiration. The extent of snow cover in the Northern Hemisphere has decreased by about 10 percent since the late 1960s, with stronger trends noted since the late 1980s. Alaska has experienced similar trends, with a strong decrease in snow cover extent occurring in May. When averaged across the State, the disappearance of snow in the spring has occurred from 4 to 6 days earlier per decade, and snow return in fall has occurred approximately 2 days later per decade. This change appears to be driven by climate warming rather than a decrease in winter precipitation, with average winter temperatures also increasing by about 2.5°F. The extent of sea ice has been declining, as has been widely published in both national and scientific media outlets, and is projected to continue to decline during this century. The observed decline in annual sea ice minimum extent (September) has occurred more rapidly than was predicted by climate models and has been accompanied by decreases in ice thickness and in the presence of multi-year ice. This decrease was first documented by satellite imagery in the late 1970s for the Bering and Chukchi Seas, and is projected to continue, with the potential for the disappearance of summer sea ice by mid- to late century. A new phenomenon that was not reported in previous assessments is ocean acidification. Uptake of carbon dioxide (CO2) by oceans has a significant effect on marine biogeochemistry by reducing seawater pH. Ocean acidification is of particular concern in Alaska, because cold sea water absorbs CO2 more rapidly than warm water, and a decrease in sea ice extent has allowed increased sea surface exposure and more uptake of CO2 into these northern waters. Ocean acidification will likely affect the ability of organisms to produce and maintain shell material, such as aragonite or calcite (calcium carbonate minerals structured from carbonate ions), required by many shelled organism, from mollusks to corals to microscopic organisms at the base of the food chain. Direct biological effects in Alaska further along the food chain have yet to be studied and may vary among organisms. Some of the potentially most significant changes to Alaska that could result from a changing climate are the effects on the terrestrial cryosphere - particularly glaciers and permafrost. Alaskan glaciers are changing at a rapid rate, the primary driver appearing to be temperature. Statewide, glaciers lost 13 cubic miles of ice annually from the 1950s to the 1990s, and that rate doubled in the 2000s. However, like temperature and precipitation, glacier ice loss is not spatially uniform; most glaciers are losing mass, yet some are growing (for example Hubbard Glacier in southeast Alaska). Alaska glaciers with the most rapid loss are those terminating in sea water or lakes. With this increasing rate of melt, the contribution of surplus fresh water entering into the oceans from Alaska's glaciers, as well as those in neighboring British Columbia, Canada, is approximately 20 percent of that contributed by the Greenland Ice Sheet. Permafrost degradation (that is, the thawing of ice-rich soils) is currently (2012) impacting infrastructure and surface-water availability in areas of both discontinuous and continuous ground ice. Over most of the State, the permafrost is warming, with increasing temperatures broadly consistent with increasing air temperatures. On the Arctic coastal plain of Alaska, permafrost temperatures showed some cooling in the 1950s and 1960s but have been followed by a roughly 5°F increase since the 1980s. Many areas in the continuous permafrost zone have seen increases in temperature in the seasonally active layer and a decrease in re-freezing rates. Changes in the discontinuous permafrost zone are initially much more observable due to the resulting thermokarst terrain (land surface formed as ice rich permafrost thaws), most notable in boreal forested areas. Climate warming in Alaska has potentially broad implications for human health and food security, especially in rural areas, as well as increased risk for injury with changing winter ice conditions. Additionally, such warming poses the potential for increasing damage to existing water and sanitation facilities and challenges for development of new facilities, especially in areas underlain by permafrost. Non-infectious and infectious diseases also are becoming an increasing concern. For example, from 1999 to 2006 there was a statistically significant increase in medical claims for insectbite reactions in five of six regions of Alaska, with the largest percentage increase occurring in the most northern areas. The availability and quality of subsistence foods, normally considered to be very healthy, may change due to changing access, changing habitats, and spoilage of meat in food storage cellars. These and other trends and potential outcomes resulting from a changing climate are further described in this report. In addition, we describe new science leadership activities that have been initiated to address and provide guidance toward conducting research aimed at making available information for policy makers and land management agencies to better understand, address, and plan for changes to the local and regional environment. This report cites data in both metric and standard units due to the contributions by numerous authors and the direct reference of their data.

Alaska↗

Spatial and temporal patterns in streamflow, water chemistry, and aquatic macroinvertebrates of selected streams in Fairfax County, Virginia, 2007–18

Urbanization substantially alters the landscape in ways that can impact stream hydrology, water chemistry, and the health of aquatic communities. Stormwater best management practices (BMPs) are the primary tools used to mitigate the effects of urban stressors such as increased runoff, decreased baseflow, and increased nutrient and sediment transport. To date, Fairfax County Virginia’s stormwater management program has made substantial investments into the implementation of both structural and nonstructural BMPs aimed at restoring and protecting watersheds. The U.S. Geological Survey (USGS), in cooperation with Fairfax County, Virginia, established a long-term water-resources monitoring program to evaluate the watershed-scale effects of these investments. Monitoring began at 14 stations in 2007 and was expanded to 20 stations in 2013. This report utilized the first 10 years of data collection to (1) assess water quantity and quality, as well as ecological condition; (2) compute annual nutrient and sediment loads; and (3) evaluate trends in streamflow, water quality, and ecological condition. Efforts are underway to link the biotic and abiotic patterns described herein to watershed management practices as well as factors such as land use change, public works infrastructure, and climate. Hydrologic, chemical, and benthic macroinvertebrate community conditions in the streams monitored were similar to those observed in other studies of urban streams. Multidecadal trends in baseflow indices and runoff ratios at long-term Chesapeake Bay Non-tidal Network streamgages (CB-NTN) indicate a decrease in groundwater recharge and increase in storm runoff as a result of urbanization. Streamflow yields varied spatially with land cover, geology, and soil characteristics, whereas flashiness was positively related to impervious area. Dissolved oxygen typically was lowest in the Coastal Plain and across all Triassic Lowlands streams, and highest in the Piedmont. Dissolved oxygen concentrations generally were above Virginia’s minimum criterion of 4.0 milligrams per liter (mg/L), most violations occurred at Paul Spring Branch in the Coastal Plain during the warmest months of the year owing to increased chemical and biological oxygen demand. Typical pH values of the monitored streams centered on neutrality (pH = 7); however, diurnal fluctuations were most prevalent in the continuous pH data at Flatlick Branch (FLAT; a Triassic Lowlands station), as a result of increased photosynthesis catalyzed by phosphorus-rich geology. Specific conductance (SC) varied spatially owing to geology (highest at Triassic Lowlands stations) and anthropogenic disturbance (watersheds with high impervious land cover). Specific conductance typically was inversely related to streamflow except in winter months following deicing road salt applications, when values increased by several orders of magnitude. A significant increase in SC of about 2 percent per year was observed from the combined trend result of all monitoring stations over the 10-year period. Significant SC increases occurred at nearly all monitoring stations. Increasing trends were observed during winter and nonwinter months, which suggests that salts applied to deice roadways and other impervious surfaces are stored in the environment and released year-round. Suspended-sediment (SS) concentrations in monthly samples did not vary significantly between most stations, but typically were highest in the spring and lowest in the fall as a result of seasonal differences in streamflow and climate. Suspended-sediment yields ranged from 62 to 1,428 tons per square mile (ton/mi 2 ), with a median of 302 ton/mi 2 . Annual loads were greatest during the wettest water years (October 1-September 30; 2008, 2011, and 2014), with the greatest interannual variability occurring at Difficult Run above Fox Lake (DIFF) and South Fork Little Difficult Run (SFLIL). Suspended sediment was primarily composed of silts and clays; however, the proportion of sand in suspended sediment was related positively to streamflow. Cross-correlation analyses suggested the dominant sources of SS were streambank erosion and resuspension of in-channel material at DIFF and FLAT; whereas, upland sources and erosion of upper streambanks were more common at Dead Run (DEAD), Long Branch (LONG), and SFLIL. Median total phosphorus (TP) concentrations ranged from 0.016 to 0.077 mg/L, with a networkwide median of 0.022 mg/L, were highest in the warm season (April-September), and were composed primarily of dissolved phosphorous. Although TP concentrations were relatively low across the network, the highest concentrations were consistently at stations located in the Triassic Lowlands, owing to phosphorous-rich geology, and in the Coastal Plain, owing to the low-phosphorous sorptive capacity of those soils. A significant increase in TP concentration occurred in a few stations, but the combined trend results from all stations demonstrated a significant increase of about 4 percent per year. Networkwide increases were also observed in total dissolved phosphorus, orthophosphate, and total particulate phosphorus. The composition of TP shifted from dissolved to particulate as streamflow increased and for this reason loads primarily were composed of particulate phosphorous. Median annual TP loads were highest at FLAT and DEAD and ranged from 247 to 642 pounds per square mile (lbs/mi 2 ) networkwide. Interannual variability in phosphorous yields was apparent at most stations; the highest loading years were also the wettest years during the study period and coincident with the highest peak annual flows. Total nitrogen (TN) concentrations typically were low throughout the network with exceptions occurring at stations located in watersheds with a high density of septic infrastructure. Elevated TN concentrations also were observed in some watersheds without a high density of septic systems and may be attributable to geologic and soil properties that limit denitrification as well as other unknown anthropogenic inputs. Total nitrogen typically was dominated by nitrate during baseflows; however, the proportion of particulate nitrogen increased during stormflows. Total nitrogen yields were similar across stations, with medians ranging from about 3,600 to 6,300 lbs/mi 2 and were related to annual streamflow volume. Total nitrogen concentrations and flow-normalized concentrations decreased over the 10-year period at 7 stations, with median reductions of about 2.5 percent. Increasing trends were observed at the two stations with the highest median TN concentration (Captain Hickory Run and SFLIL, 3–5 mg/L), both watersheds contain a high density of septic infrastructure. The combined trend results from all stations revealed no trend in TN and a declining trend in nitrate of about 2 percent per year. Overall, benthic community metrics indicated that streams throughout Fairfax County were initially of poor health; however, many metrics show an improving trend (from poor to fair based on the Fairfax County Index of Biological Integrity [IBI]). Significant increasing trends in IBI occurred at the network-scale and at 4 individual stations; additionally, scores improved by at least 1 qualitative category (for example, poor to fair, fair to good) at 11 of the 14 stations between 2009 (the first year all 14 stations were sampled) and 2017. Changes in all metrics suggest that the biodiversity, function, and condition of streams in Fairfax County are improving, but some of these improvements are driven by increased diversity and percent composition of organisms that are tolerant of the urban environment.

Virginia↗

2011 Georgiana Slough non-physical barrier performance evaluation project report

The Sacramento River and its tributaries support populations of anadromous fish species including winter-run, spring-run, fall-run, and late fall–run Chinook salmon ( Oncorhynchus tshawytscha ); and steelhead ( O. mykiss ). Several of these species are listed as threatened or endangered under the California Endangered Species Act (CESA), federal Endangered Species Act (ESA), or both. These species spawn and rear in Sacramento River tributaries; adults use the mainstem Sacramento River for primarily upstream migration and juveniles use it for downstream migration. Juvenile Chinook salmon and steelhead migrate through the lower river during winter and spring. During their downstream migration, juvenile salmonids encounter alternative pathways, such as Sutter and Steamboat Sloughs, the Sacramento–San Joaquin Delta (Delta), Delta Cross Channel (DCC), and Georgiana Slough. Likewise, sturgeon juveniles migrate downstream in the Sacramento River basin to the Delta, utilizing the distributary channels to rear within and migrate through the system. Georgiana Slough is a natural channel that allows water and fish to move into the interior Delta. Previous studies have demonstrated that juvenile Chinook salmon experience greater mortality when migrating into Georgiana Slough than those juveniles that continue to migrate downstream in the Sacramento River (Perry 2010). Movement and/or diversion of these fish into the interior and south Delta increases the likelihood of losses through predation, entrainment into non-project Delta diversions, and mortality associated with the State Water Project (SWP) and Central Valley Project (CVP) pumping facilities in the south Delta (Perry 2010; NMFS 2009). Figure ES-1 shows the migration pathways in the lower Sacramento River and Delta for outmigrating anadromous salmonids, and the location of the DCC, and the SWP and CVP pumping facilities in the south Delta. Passage of juvenile salmonids from the Sacramento River into the interior Delta through the DCC can be reduced through seasonal closure of the radial gates (February through May); however, no similar protection is available to reduce the movement of juvenile salmonids from the Sacramento River into the interior Delta through Georgiana Slough. Flows into Georgiana Slough improve water quality and flushing in the interior Delta and free access encourages use by recreational boaters. Because of these benefits, alternatives to the installation of a physical barrier (i.e. radial gates), are being investigated. Under the ESA, the National Marine Fisheries Service (NMFS) issued the 2009 Biological and Conference Opinion for the Long‐Term Operations of the Central Valley Project and State Water Project (BO) for Chinook salmon and other listed anadromous fish species (NMFS 2009). Reasonable and Prudent Alternative (RPA) Action IV.1.3 of the BO requires the California Department of Water Resources (DWR) and the U.S. Bureau of Reclamation (Reclamation) to consider engineering solutions to reduce the diversion of juvenile salmonids from the Sacramento River into the interior and south Delta. DWR implemented the 2011 Georgiana Slough NonPhysical Barrier (GSNPB) Study to test the effectiveness of using a non-physical barrier, referred to as a behavioral Bio-Acoustic Fish Fence (BAFF), that combines three stimuli to deter juvenile Chinook salmon from entering Georgiana Slough: sound, high-intensity modulated light (previously known as stroboscopic light), and a bubble curtain. This report presents the results of the experimental tests conducted in 2011.

California↗