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At least 1,315 records · Page 73Linked to original sources
USGS2021

Experimental warming differentially affects vegetative and reproductive phenology of tundra plants

Rapid climate warming is altering Arctic and alpine tundra ecosystem structure and function, including shifts in plant phenology. While the advancement of green up and flowering are well-documented, it remains unclear whether all phenophases, particularly those later in the season, will shift in unison or respond divergently to warming. Here, we present the largest synthesis to our knowledge of experimental warming effects on tundra plant phenology from the International Tundra Experiment. We examine the effect of warming on a suite of season-wide plant phenophases. Results challenge the expectation that all phenophases will advance in unison to warming. Instead, we find that experimental warming caused: (1) larger phenological shifts in reproductive versus vegetative phenophases and (2) advanced reproductive phenophases and green up but delayed leaf senescence which translated to a lengthening of the growing season by approximately 3%. Patterns were consistent across sites, plant species and over time. The advancement of reproductive seasons and lengthening of growing seasons may have significant consequences for trophic interactions and ecosystem function across the tundra.

Nature Communications↗
USGS2026

Environmental DNA pilot monitoring program for invasive species and biodiversity assessments on Santa Cruz Island: Interim report, September 2025

The U.S. Geological Survey (USGS) and Southern California Coastal Water Research Project supported Channel Islands National Park, The Nature Conservancy’s (TNC) Santa Cruz Island Preserve, and University of California San Diego (UCSD) researchers in using environmental DNA sampling to monitor for invasive Argentine ant ( Linepithema humile ) and to describe spatial biodiversity patterns in a freshwater stream on Santa Cruz Island that is colloquially known as Cañada del Puerto Creek (hydrologic unit code 12 number 180600140201). An eDNA autosampler was deployed May 27–June 02, 2025, which filtered and preserved four 2-L water samples every 12 hours (n = 48 samples). These samples were extracted by USGS and shipped to UCSD for targeted eDNA analyses of Argentine ant. Environmental DNA sampling kits were used to filter and preserve water samples at four sites along the creek spanning ~ 5 km of stream distance. Six 1-L samples were collected at each site May 27–28 and samples were analyzed for eDNA metabarcoding using a comprehensive panel, which encompasses species across the tree of life. In these samples, eDNA from 2,134 unique taxa spanning 30 taxonomic groups (e.g., amoebas, insects, plants) were found. These sampling efforts demonstrated how eDNA autonomous and manual sampling approaches can be applied by National Park Service, TNC, and partners at scale to provide otherwise difficult and expensive to acquire information about biological threats and biodiversity.

California↗
USGS1986

Water supplies in western Kentucky during 1984

An inventory was conducted between April and October 1985 of 101 major public supply systems and of self-supplied commercial and industrial water systems in a 27-county area in western Kentucky. These systems, because they withdraw at least 10,000 gal/day (gpd), are regulated by the Kentucky Natural Resources and Environmental Projection Cabinet (Division of Water) through a permitting program. The major purpose of the inventory was to evaluate the adequacy of these water systems to meet demands during times of drought. The inventory indicated that these systems withdrew 116.3 million gpd in 1984. The study showed that public facilities supplied 33.1 mil gpd to 471,500 people. Bowling Green Municipal Utilities in the Green River basin was the largest single public supplier. It supplied 5.05 million gpd to 48,000 people, and also sold over 1.7 million gpd to about 30 ,000 people through the Warren County Water System. Comparisons of ground- and surface-water use indicated the Lower Ohio River basin had the highest percentage of surface-water use at 97%, and the Mississippi River basin had the highest percentage of groundwater use at 41%. Sources of water were generally adequate throughout the study area. Sources for two industries, also in the Green River basin, are inadequate. Six systems may have potential problems with their treatment plant capacities because they are operating at > 80% of design capacity. Three of these systems are in the Green River basin, two are in the Lower Cumberland River basin, and one is in the Tennessee River basin. (Author 's abstract)

Water-Resources Investigations Report↗
USGS2007

Ground-Water Nutrient Flux to Coastal Waters and Numerical Simulation of Wastewater Injection at Kihei, Maui, Hawaii

Water sampling and numerical modeling were used to estimate ground-water nutrient fluxes in the Kihei area of Maui, where growth of macroalgae (seaweed) on coral reefs raises ecologic concerns and accumulation on beaches has caused odor and removal problems. Fluxes and model results are highly approximate, first-order estimates because very few wells were sampled and there are few field data to constrain model calibration. Ground-water recharge was estimated to be 22.6 Mgal/d (million gallons per day) within a 73-square-mile area having a coastline length of 8 miles or 13 km (kilometers). Nearly all of the recharge discharges at the coast because ground-water withdrawals are small. Another 3.0 Mgal/d of tertiary-treated wastewater effluent is injected into the regional aquifer at a County treatment plant midway along the coast and about a mile from shore. The injection plume is 0.93 miles wide (1.5 km) at the shore, as estimated from a three-dimensional numerical ground-water model. Wastewater injected beneath the brackish ground-water lens rises buoyantly and spreads out at the top of the lens, diverting and mixing with ambient ground water. Ground water discharging from the core of the injection plume is less than 5 years old and is about 60 percent effluent at the shore, according to the model. Dissolved nitrogen and phosphorus concentrations in treated effluent were 7.33 and 1.72 milligrams per liter, roughly 6 and 26 times background concentrations at an upgradient well. Background nitrogen and phosphorus fluxes carried by ground water are 7.7 and 0.44 kg/d-km (kilograms per day per kilometer of coast). Injected wastewater fluxes distributed across the plume width are 55 and 13 kg/d-km nitrogen and phosphorus, roughly 7 and 30 times background flux. However, not all of the injected load reaches coastal waters because nutrients are naturally attenuated in the oxygen-depleted effluent plume. Water from a downgradient well reflects this attenuation and provides a more conservative estimate of injection flux approaching the shore: 27 and 1.5 kg/d-km nitrogen and phosphorus, roughly one-half and one-ninth the injection-source estimates, and 3.5 and 3.4 times background flux. Effluent has 8 O and 2 H stable-isotope signatures that are distinct from local ground water, as well as 15 N and 11 B signatures diagnostic of domestic waste and laundry detergents, respectively. Pharmaceuticals and organic wastewater compounds also were present in effluent and the downgradient well. These isotopes and chemicals served as wastewater tracers in Kihei ground water and may be useful tracers in nearshore marine waters and aquifers elsewhere in Hawaii.

Scientific Investigations Report↗
USGS1976

Use of an airborne Fraunhofer line discriminator for the detection of solar stimulated luminescence

Luminescence is the property of some materials to emit light when excited by external stimuli such as ultraviolet or visible light or by chemical or mechanical action. The Fraunhofer line discriminator (FLO) is an airborne electro-optical device which operates as a non-imaging radiometer and permits detection of solar stimulated luminescence several orders of magnitude below the intensity detectable with the human eye. A prototype FLO, used in 1969 to monitor the dynamic of water currents in the San Francisco area, was than 5 parts per Airborne tests o a redesigned FLO, featuring an order of magnitude improvement in sensitivity, permitted measurement of differences in the luminescence of trees containing geochemically anomalous concentrations of Colorado) and molybdenum (near Gardnerville, Nevada) trees growing in background areas nearby. In the tests near Denver, luminescence-contrast between stressed and non-stressed trees tended to be greater during periods when cloud cover was 10 percent or less; in most cases, contrast insignificant when cloud cover exceeded 10 percent. In other airborne test the FLO distinguished luminescing phosphate rock and gypsum from sands one and siltstone near Pine Mountain, California; dispersal of oil in a natural seep from uncontaminated sea water in the Santa Barbara Channel; cattle feed lot and municiple sewage effluents near Denver; and paper and phosphate processing effluents in eastern and central Florida. Procedures employing a laboratory fluorescence spectrometer permit prediction of the detectivity with an FLO prior to monitoring an airborne test. Luminescence spectra of the material are corrected for wavelength variation in spectrometer source, detector sensitivity, and solar illumination. By comparing these results with the luminescence of a rhodamine WT dye standard, the luminescence .of the material may be expressed in terms of rhodamine dye equivalency at the wavelength of several Fraunhofer lines. The FLO detectivity may be assessed at each Fraunhofer line, and the optimum line for field observation of the material may be selected. Future work will include the integration of the FLO with a line scan imaging system in order to assess the contribution of two-dimensional spatial resolution to the interpretability and usefulness of luminescence data. It should also include 1) investigation of luminescence polarization of some materials, particularly metal stressed plants, 2) an assessment of the use of pulsed lasers to stimulate phosphorescence decay time in the nanosecond and microsecond ranges; and 3) a study to determine the feasibility of conducting an FLO experiment from the Space Shuttle or other spacecraft.

Open-File Report↗
USGS2002

Reconstruction of Anacostia wetlands: success?

Historically, the tidal Anacostia River in Washington, D.C. had been an extensive system of freshwater tidal marshes replete with a full array of wetland vegetation dominated by wild rice. The local Nacochtank Indians had found the abundant fish and wildlife sufficient to sustain their daily lives. White man's intrusion upon the landscape gradually brought about deterioration of the natural (and associated cultural) system. Total demise followed mid-20th century dredge and fill channelization, which was conducted from the confluence of the Anacostia with the Potomac near the heart of Washington, D.C. to the terminus of the tidal regime at Bladensburg, Maryland. The National Park Service (NPS) became the manager for much of the land along the Anacostia, particularly the eastern bank. As part of its planning effort, the NPS envisioned returning portions of the Anacostia under its control to a natural system as a vignette. The concept was based on bringing back as comprehensive a collection of vegetation and wildlife as possible through the reestablishment of tidal marshes at Kenilworth and Kingman. The resultant wetlands were to be made accessible to the public both logistically and through a well designed interpretative program. In fact, this vision has been realized due to an impressive cooperative effort among a number of Federal and local agencies and organizations. In 1993, 32 acres of freshwater tidal marsh were reconstructed at Kenilworth. Based upon the 5-year monitoring program that has been in place since reconstruction, several generalizations may be made concerning the degree of success of the marsh reconstruction. Water quality in the marsh system and nearby tidal waters has not been noticeably improved. The poor quality may be clue to the overwhelmingly high loads (e.g., sediment, nutrients, etc.) brought in on the twice daily tidal cycle from the Anacostia and to the relatively small volume of water which actually interacts with the emergent marsh. Revegetation, which is a product of direct plantings (16 species comprised of 350,000 plants) and by establishment of volunteer plants, must be considered successful. Remarkably, full vegetation cover was achieved by the end of the first year (1993). Species diversity is high with 100-130 wetland species occupying portions of the wetland. Good species differentiation (incipient plant communities) can be noted at areas of sediment elevation differences. There is a good range of predominant species (five to eight) with rice cutgrass (Leersia oryzoides) initially being dominant but in later years becoming codominant. Even the native wild rice (Zizania aquatica) is making a substantive comeback. Invasive plants such as purple loosestrife (Lythrum salicaria) and phragmites (Phragmites australis) are being watched and dealt with as appropriate. There has been important habitat creation, and a resulting increase in fauna can be expected, particularly as the acreage reconstructed at Kenilworth has more than doubled with similarly reconstructed wetlands at Kingman Lake (42 acres), which were completed during the summer of 2000, just a quarter of a mile down river. One of the challenges with the Kingman marsh reconstruction has been protecting against the grazing pressure of native Canada geese (Branm canadensis). In the long run, these revived Anacostia wetlands are bound to improve local conditions and will contribute to a rejuvenated Chesapeake Bay system.

Book chapter↗
USGS2018

River flow and riparian vegetation dynamics - implications for management of the Yampa River through Dinosaur National Monument

This report addresses the relation between flow of the Yampa River and occurrence of herbaceous and woody riparian vegetation in Dinosaur National Monument (DINO) with the goal of informing management decisions related to potential future water development. The Yampa River in DINO flows through diverse valley settings, from the relatively broad restricted meanders of Deerlodge Park to narrower canyons, including debris fan-affected reaches in the upper Yampa Canyon and entrenched meanders in Harding Hole and Laddie Park. Analysis of occurrence of all plant species measured in 1470 quadrats by multiple authors over the last 24 years shows that riparian vegetation along the Yampa River is strongly related to valley setting and geomorphic surfaces, defined here as active channel, active floodplain, inactive floodplain, and upland. Principal Coordinates Ordination arrayed quadrats and species along gradients of overall cover and moisture availability, from upland and inactive floodplain quadrats and associated xeric species like western wheat grass (Pascopyrum smithii), cheatgrass (Bromus tectorum), and saltgrass (Distichlis spicata) to active channel and active floodplain quadrats supporting more mesic species including sandbar willow (Salix exigua), wild licorice (Glycyrrhiza lepidota), and cordgrass (Spartina spp.). Indicator species analysis identified plants strongly correlated with geomorphic surfaces. These species indicate state changes in geomorphic surfaces, such as the conversion of active channel to floodplain during channel narrowing. The dominant woody riparian species along the Yampa River are invasive tamarisk (Tamarix ramosissima), and native Fremont cottonwood (Populus deltoides ssp. wislizenii), box elder (Acer negundo L. var. interius), and sandbar willow (Salix exigua). These species differ in tolerance of drought, salinity, inundation, flood disturbance and shade, and in seed size, timing of seed dispersal and ability to form root sprouts. These physiological and ecological differences interact with flow variation and geomorphic setting, resulting in differential patterns of occurrence. For example, in park settings cottonwood is far more abundant than box elder, while the reverse is true in canyons. Synthesis of existing knowledge from the Yampa and Green rivers and elsewhere suggests that the following flow-vegetation relations can be used to assess effects of future flow alterations in the Yampa River. High variability in flow within and between years removes vegetation through erosion, extended inundation and desiccation, creating the broad, open surfaces in and near the channel that are characteristic of lightly regulated rivers in western North America. This flow variability provides opportunities for establishment of disturbance-dependent riparian species. Flow regulation that results in lower peak flows and higher low flows allows proliferation of woody riparian vegetation, mostly tamarisk in canyon reaches, but both tamarisk and cottonwood in parks. Denser near-channel vegetation promotes sediment deposition leading to channel narrowing. Decreasing flow variability also increases area of species associated with extremely high and low inundation durations relative to species associated with moderate inundation duration. In addition, such flow regulation decreases occurrence of species tolerant of fluvial disturbance, while increasing occurrence of species tolerant of extended inundation. Over the long term, establishment of cottonwood and tamarisk requires disturbance by large floods, which provides openings for new individuals. At the annual time scale, establishment can occur in any year or location that provides a moist, open surface free from frequent future disturbance. In canyons, where channel movement is limited, low surfaces are too frequently disturbed for long-term survival of cottonwood, and establishment requirements are generally met only in years of moderate to high peak flows. In park settings cottonwood establishment may also occur in years of low peak flows where survival is promoted by movement of the channel away from the seedling. Peak flows early in the growing season promote establishment of cottonwood and sandbar willow seedlings relative to those of tamarisk. This is because cottonwood and willow seed release occurs early in the summer, while that of tamarisk occurs later. Late season seed release of tamarisk allows it to establish lower on the floodplain than cottonwood. Because of its shade tolerance and the energy stored in its large seeds, box elder can become established beneath existing vegetation, an ability not shared by cottonwood, tamarisk or willow. Although box elder does not require flood disturbance, it does take advantage of soil moisture from floods, which allow this species to become established high above the channel. Decreases in flow peaks, volumes or base flows decrease growth and survival of cottonwood relative to drought-tolerant tamarisk. Storing water from the spring peak in a reservoir for release after the April-July cottonwood growth window may also decrease growth and survival of cottonwood relative to tamarisk. Decreases in peak flows decrease floodplain inundation, which can reduce growth of floodplain species by preventing recharge of the floodplain aquifer. Two or more years in a row with similar flows promote establishment of woody vegetation. Subsequent sediment deposition around this vegetation, especially if the vegetation is tamarisk, results in channel narrowing and simplification. Rapid declines in the descending limb of the hydrograph kill riparian woody seedlings by desiccation. Fluctuations in the descending limb can kill seedlings by desiccation and inundation. Thus rapid declines and fluctuations would be counterproductive following early-season peaks prescribed to promote cottonwood, but would be consistent with the goal of preventing tamarisk establishment following a late-season peak. The tendency of regulated flows to keep returning to a small number of fixed discharge values (such as power plant capacity or a fixed minimum flow) can cause unnaturally sharp banding of geomorphic surfaces, topography and vegetation that is not necessarily erased by large flood peaks. Changes in sediment load relative to transport capacity may promote channel change especially in alluvial settings. For example, decreases in sediment input from the Little Snake River Basin since 1960 (or earlier) could be associated with channel narrowing and temporary increases in establishment of both cottonwood and tamarisk along the Yampa River. Increases in salinity of water or soil promote tamarisk over the native woody species. Even if water salinity does not increase, floodplain soil salinity can be increased by decreasing the flushing caused by overbank flooding.

Dinosaur National Monument, Yampa River↗
USGS2000

Regional evaluation of evapotranspiration in the Everglades

Nine sites in the Florida Everglades were selected and instrumented for collection of data necessary for evapotranspiration-determination using the Bowen-ratio energy-budget method. The sites were selected to represent the sawgrass or cattail marshes, wet prairie, and open-water areas that constitute most of the natural Everglades system. At each site, measurements necessary for evapotranspiration (ET) calculation and modeling were automatically made and stored on-site at 15- or 30-minute intervals. Data collected included air temperature and humidity at two heights, wind speed and direction, incoming solar radiation, net solar radiation, water level and temperature, soil moisture content, soil temperature, soil heat flux, and rainfall. Data summarized in this report were collected from January 1996 through December 1997, and the development of site-specific and regional models of ET for this period is described. Latent heat flux is the energy flux density equivalent of the ET rate. Modified Priestley-Taylor models of latent heat flux as a function of selected independent variables were developed at each site. These models were used to fill in periods of missing latent heat flux measurement, and to develop regional models of the entire Everglades region. The regional models may be used to estimate ET in wet prairie, sawgrass or cattail marsh, and open-water portions of the natural Everglades system. The models are not applicable to forested areas or to the brackish areas adjacent to Florida Bay. Two types of regional models were developed. One type of model uses measurements of available energy at a site, together with incoming solar energy and water depth, to estimate hourly ET. This available-energy model requires site data for net radiation, water heat storage, and soil heat flux, as well as data for incoming solar radiation and water depth. The other type of model requires only incoming solar energy, air temperature, and water depth data to provide estimates of hourly ET. The second model thus uses data that are more readily available than the data required for the available-energy model. Computed ET mean annual totals for all nine sites for the 1996-97 period ranged from 42.4 inches per year at a site where the water level is below land surface for several months each year to 57.4 inches per year at an open-water site with no emergent vegetation. Although the density of photosynthetically-active plant leaves has been shown to relate directly to ET in some studies, it does not appear to relate directly to ET in the Everglades, based on comparison of annual ET data with leaf-area index, defined as the Normalized Difference Vegetation Index (NDVI), data from satellite imagery. NDVI and ET appear to be inversely related in the Everglades. The greatest ET rates occurred at open-water sites where the NDVI data indicated the lowest leaf-area index. Among the remaining vegetated sites, there is no clear relation between ET and NDVI, though the highest ET rate corresponded to the lowest NDVI and one of the lowest ET rates corresponded to the highest NDVI value. The variation in ET follows a seasonal pattern, with lowest monthly ET totals occurring in December through February, and highest ET occurring in May through August. The greatest range in monthly ET among all nine sites for the 2-year period occurred at site 3: from 1.81 inches in December 1997 to 6.84 inches in July 1996. A study to compare the Bowen-ratio/energy balance method of ET measurement with the eddy-correlation method was done at one site from June 22, 1998, through September 28, 1998. This comparison indicated that both methods gave comparable values of the Bowen ratio, but there was a considerable difference in available energy measured by the two methods. The mean of all 30-minute measured turbulent heat fluxes from the eddy-correlation apparatus for June 22 through September 29, 1998, was 137.4 watts per square meter, and the mean of the corresponding measured energy was 163.6 watts per square meter, or about 20 percent greater. The disagreement in mean energy fluxes measured by the two methods is problematical and is not fully understood. Although the difference seems to be related to friction velocity, and is practically non-existent at values of friction velocity greater than 0.3 meter per second, the "correctness" of either method cannot be determined with the data available.

Florida↗
USGS2016

The Integrated Landscape Modeling partnership - Current status and future directions

The Integrated Landscape Modeling (ILM) partnership is an effort by the U.S. Geological Survey (USGS) and U.S. Department of Agriculture (USDA) to identify, evaluate, and develop models to quantify services derived from ecosystems, with a focus on wetland ecosystems and conservation effects. The ILM partnership uses the Integrated Valuation of Ecosystem Services and Tradeoffs (InVEST) modeling platform to facilitate regional quantifications of ecosystem services under various scenarios of land-cover change that are representative of differing conservation program and practice implementation scenarios. To date, the ILM InVEST partnership has resulted in capabilities to quantify carbon stores, amphibian habitat, plant-community diversity, and pollination services. Work to include waterfowl and grassland bird habitat quality is in progress. Initial InVEST modeling has been focused on the Prairie Pothole Region (PPR) of the United States; future efforts might encompass other regions as data availability and knowledge increase as to how functions affecting ecosystem services differ among regions. The ILM partnership is also developing the capability for field-scale process-based modeling of depressional wetland ecosystems using the Agricultural Policy/Environmental Extender (APEX) model. Progress was made towards the development of techniques to use the APEX model for closed-basin depressional wetlands of the PPR, in addition to the open systems that the model was originally designed to simulate. The ILM partnership has matured to the stage where effects of conservation programs and practices on multiple ecosystem services can now be simulated in selected areas. Future work might include the continued development of modeling capabilities, as well as development and evaluation of differing conservation program and practice scenarios of interest to partner agencies including the USDA’s Farm Service Agency (FSA) and Natural Resources Conservation Service (NRCS). When combined, the ecosystem services modeling capabilities of InVEST and the process-based abilities of the APEX model should provide complementary information needed to meet USDA and the Department of the Interior information needs.

Iowa, Minnesota, Nebraska, North Dakota, South Dak↗
USGS2018

Conserving all the pollinators: Variation in probability of pollen transport among insect taxa

As concern about declining pollinator populations mounts, it is important to understand the range of insect taxa that provide pollination services. We use pollen transport information acquired over three years in two habitats at Badlands National Park, South Dakota, USA, to compare probabilities of pollen transport among insect taxa and between sexes of bees. Sampling was conducted on 1-ha plots, eight in sparse vegetation (May–October samples; N = 74 surveys) and 12 in wheatgrass prairie vegetation (June–July samples; N = 87 surveys). Insects contacting reproductive parts of flowers were netted, placed individually into tubes charged with ethyl acetate, then transferred to individual labeled glassine envelopes for transport to the lab. Pollen was removed from insect bodies with fuchsin jelly cubes which were then mounted on microscope slides for identification. The probability of taxa transporting only conspecific pollen (with respect to the plant species upon which it was collected), mixed pollen, only non-conspecific, or no pollen was estimated with multinomial logistic regression. Bees were the most commonly captured flower visitor and carried by far the most pollen (females >10× as much as males), but they were most likely to carry mixed pollen loads. Flies, beetles, and wasps were also common flower visitors and beetles were most likely to carry only conspecific pollen. Ants and diurnal lepidopterans were unlikely to carry any pollen. Bees, beetles, flies, and wasps varied in the timing and habitat in which they were most likely to transport pollen, suggesting that all played a role in providing robust pollination services.

South Dakota↗
USGS2012

Female Agassiz’s desert tortoise activity at a wind energy facility in southern California: The influence of an El Niño event

We compared spring-summer activity of adult female Agassiz’s Desert Tortoises ( Gopherus agassizii ) among three consecutive years (1997, 1998, and 1999) that differed dramatically in winter rainfall and annual plant production at a wind energy facility in the Sonoran Desert of southern California. Winter rainfall was approximately 71%, 190%, and 17% of the long-term average (October-March = 114 mm) for this area in water years (WY) 1997, 1998, and 1999, respectively. The substantial precipitation caused by an El Niño Southern Oscillation (ENSO) event in WY 1998 produced a generous annual food plant supply (138.2 g dry biomass/ m 2 ) in the spring. Primary production of winter annuals during below average rainfall years (WY 1997 and WY 1999) was reduced to 98.3 and 0.2 g/m 2 , respectively. Mean rates of movement and mean body condition indices (mass/length) did not differ significantly among the years. The drought year following ENSO (WY 1999) was statistically similar to ENSO in every other measured value, while WY 1997 (end of a two year drought) was statistically different from ENSO using activity area, minimum number of burrows used, and percentage of non-movements. Our data suggest that female G. agassizii activity can be influenced by environmental conditions in previous years.

California↗
USGS2016

Population-specific life histories contribute to metapopulation viability

Restoration efforts can be improved by understanding how variations in life-history traits occur within populations of the same species living in different environments. This can be done by first understanding the demographic responses of natural occurring populations. Population viability analysis continues to be useful to species management and conservation with sensitivity analysis aiding in the understanding of population dynamics. In this study, using life-table response experiments and elasticity analyses, we investigated how population-specific life-history demographic responses contributed to the metapopulation viability of the Federally threatened Pitcher's thistle ( Cirsium pitcheri ). Specifically, we tested the following hypotheses: (1) Subpopulations occupying different environments within a metapopulation have independent demographic responses and (2) advancing succession results in a shift from a demographic response focused on growth and fecundity to one dominated by stasis. Our results showed that reintroductions had a positive contribution to the metapopulation growth rate as compared to native populations which had a negative contribution. We found no difference in succession on the contribution to metapopulation viability. In addition, we identified distinct population-specific contributions to metapopulation viability and were able to associate specific life-history demographic responses. For example, the positive impact of Miller High Dunes population on the metapopulation growth rate resulted from high growth contributions, whereas increased time of plant in stasis for the State Park Big Blowout population resulted in negative contributions. A greater understanding of how separate populations respond in their corresponding environment may ultimately lead to more effective management strategies aimed at reducing extinction risk. We propose the continued use of sensitivity analyses to evaluate population-specific demographic influences on metapopulation viability. In understanding the underlying causes of the projected extinction probabilities of each population and identifying broad-scale contributions of different populations to the metapopulation, the process of pinpointing target populations is simplified. More detailed analyses can then be applied to the target populations to increase population viability and consequently metapopulation viability. Based on our research, we suggest that the best approach to improve the overall metapopulation viability is to manage the contributions to population growth for each population separately.

Ecosphere↗
USGS2023

Ammonia and aquatic ecosystems – A review of global sources, biogeochemical cycling, and effects on fish

The purpose of this review is to better understand the full life cycle and influence of ammonia from an aquatic biology perspective. While ammonia has toxic properties in water and air, it also plays a central role in the biogeochemical nitrogen (N) cycle and regulates mechanisms of normal and abnormal fish physiology. Additionally, as the second most synthesized chemical on Earth, ammonia contributes economic value to many sectors, particularly fertilizers, energy storage, explosives, refrigerants, and plastics. But, with so many uses, industrial N 2 -fixation effectively doubles natural reactive N concentrations in the environment. The consequence is global, with excess fixed nitrogen driving degradation of soils, water, and air; intensifying eutrophication, biodiversity loss, and climate change; and creating health risks for humans, wildlife, and fisheries. Thus, the need for ammonia research in aquatic systems is growing. In response, we prepared this review to better understand the complexities and connectedness of environmental ammonia. Even the term “ammonia” has multiple meanings. So, we have clarified the nomenclature, identified units of measurement, and summarized methods to measure ammonia in water. We then discuss ammonia in the context of the N-cycle, review its role in fish physiology and mechanisms of toxicity, and integrate the effects of human N-fixation, which continuously expands ammonia's sources and uses. Ammonia is being developed as a carbon-free energy carrier with potential to increase reactive nitrogen in the environment. With this in mind, we review the global impacts of excess reactive nitrogen and consider the current monitoring and regulatory frameworks for ammonia. The presented synthesis illustrates the complex and interactive dynamics of ammonia as a plant nutrient, energy molecule, feedstock, waste product, contaminant, N-cycle participant, regulator of animal physiology, toxicant, and agent of environmental change. Few molecules are as influential as ammonia in the management and resilience of Earth's resources.

Science of the Total Environment↗
USGS2004

Water-quality data from 2002 to 2003 and analysis of data gaps for development of total maximum daily loads in the Lower Klamath River Basin, California

The U.S. Geological Survey (USGS) collected water-quality data during 2002 and 2003 in the Lower Klamath River Basin, in northern California, to support studies of river conditions as they pertain to the viability of Chinook and Coho salmon and endangered suckers. To address the data needs of the North Coast Regional Water Quality Control Board for the development of Total Maximum Daily Loads (TMDLs), water temperature, dissolved oxygen, specific conductance, and pH were continuously monitored at sites on the Klamath, Trinity, Shasta, and Lost Rivers. Water-quality samples were collected and analyzed for selected nutrients, organic carbon, chlorophyll-a, pheophytin-a, and trace elements. Sediment oxygen demand was measured on the Shasta River. Results of analysis of the data collected were used to identify locations in the Lower Klamath River Basin and periods of time during 2002 and 2003 when river conditions were more likely to be detrimental to salmonid or sucker health because of occasional high water temperatures, low dissolved oxygen, and conditions that supported abundant populations of algae and aquatic plants. The results were also used to assess gaps in data by furthering the development of the conceptual model of water flow and quality in the Lower Klamath River Basin using available data and the current understanding of processes that affect water quality and by assessing needs for the develoment of mathematical models of the system. The most notable gap in information for the study area is in sufficient knowledge about the occurrence and productivity of algal communities. Other gaps in data include vertical water-quality profiles for the reservoirs in the study area, and in an adequate understanding of the chemical oxygen demands and the sediment oxygen demands in the rivers and of the influence of riparian shading on the rivers. Several mathematical models are discussed in this report for use in characterizing the river systems in the study area; also discussed are the specific data needed for the models, and the spatial and temporal data available as boundary conditions. The models will be useful for the future development of TMDLs for temperature, nutrients, and dissolved oxygen and for assessing the role of natural and anthropogenic sources of heat, oxygen-producing and -consuming substances, and nutrients in the Klamath, Shasta, and Lost Rivers.

Scientific Investigations Report↗
USGS2012

Microbial colonization and controls in dryland systems

Drylands constitute the most extensive terrestrial biome, covering more than one-third of the Earth's continental surface. In these environments, stress limits animal and plant life, so life forms that can survive desiccation and then resume growth following subsequent wetting assume the foremost role in ecosystem processes. In this Review, we describe how these organisms assemble in unique soil- and rock-surface communities to form a thin veneer of mostly microbial biomass across hot and cold deserts. These communities mediate inputs and outputs of gases, nutrients and water from desert surfaces, as well as regulating weathering, soil stability, and hydrological and nutrient cycles. The magnitude of regional and global desert-related environmental impacts is affected by these surface communities; here, we also discuss the challenges for incorporating the consideration of these communities and their effects into the management of dryland resources.

Nature Reviews Microbiology↗
USGS2020

Toward improving pollinator habitat: Reconstructing prairies with high forb diversity

Reconstructed prairies can provide habitat for pollinating insects, an important ecosystem service. To optimize reconstructions for pollinators, goals may include enhancing flowering plant cover and richness and increasing bloom availability early and late in the growing season. Resistance to invasive exotic species must also be a goal in any reconstruction, but it is unclear how increasing forb richness and dominance may affect susceptibility to invasion. We compared planted forb richness and cover, cover of planted grasses, and persistence of exotic species 10 y post-planting of reconstructions with 58 species (extra-high richness), 34 species (high), 20 species (medium), and 10 species (low) planted at the same time in the same fields, and using the same methods and overall seeding rate at Neal Smith National Wildlife Refuge in Iowa, USA. Planted forb richness and cover were higher and planted warm-season, but not cool-season, grass cover was lower in the extra-high richness plots. Mean Coefficient of Conservatism was higher and there was less cover of exotic forbs in the extra-high richness plots. Cover of exotic cool-season grasses was greater in the extra-high richness plots than in the lower-richness plots and this trend was still increasing at the last sample date. Our results are encouraging in that we increased cover of pollinator-friendly habitat, but invasive grasses are a concern as they may reduce forb cover and opportunities for ground-nesting bees in the long term.

Iowa↗
USGS2012

Genetic and environmental influences on cold hardiness of native and introduced riparian trees

To explore latitudinal genetic variation in cold hardiness and leaf phenology, we planted a common garden of paired collections of native and introduced riparian trees sampled along a latitudinal gradient. The garden in Fort Collins, Colorado (latitude 40.6°N), included 681 native plains cottonwood (Populus deltoides subsp. monilifera) and introduced saltcedar (Tamarix ramosissima, T. chinensis, and hybrids) collected from 15 sites from 29.2 to 47.6°N in the central United States. In the common garden, both species showed latitudinal variation in fall, but not spring, leaf phenology. This suggests that latitudinal gradient field observations in fall phenology are a result, at least in part, of the inherited variation in the critical photoperiod. Conversely, the latitudinal gradient field observations in spring phenology are largely a plastic response to the temperature gradient. Populations from higher latitudes exhibited earlier bud set and leaf senescence. Cold hardiness varied latitudinally in both fall and spring for both species. Although cottonwood was hardier than saltcedar in midwinter, the reverse was true in late fall and early spring. The latitudinal variation in fall phenology and cold hardiness of saltcedar appears to have developed as a result of multiple introductions of genetically distinct populations, hybridization, and natural selection in the 150 years since introduction.

Conference Paper↗
USGS2018

Quantifying effects of deer browsing on vegetation establishment, growth and development in large-extent overwash fans

Hurricane Sandy provided a unique opportunity to better understand the potential effects of white-tailed deer ( Odocoileus virginianus borealis ) on recovering vegetation in areas overwashed by Hurricane Sandy in the Otis Pike Fire Island High Dune Wilderness Area. White-tailed deer are the dominant herbivore on Fire Island and they are known to decrease plant diversity, limit reproduction and growth of some plant species, and facilitate growth and expansion of non-native species through selective browsing. Deer also negatively affect the federally-threatened seabeach amaranth plants along the island’s beaches. Deer impacts to forest understory and regeneration have been documented in Fire Island’s Sunken Forest for decades, though their impacts to recovering dune vegetation are less understood and could restrict the resilience and recovery of primary dunes. Through use of several vegetation assessment methods, including point intercept and paired permanent exclosures, and deer monitoring with trail cameras, we documented high variability in among-overwash species richness, vegetation cover, and local deer abundance. We observed 29 vegetation species among overwash fans between 2015 and 2016. Greater vegetation cover was observed in northern (i.e., inland) areas of all overwash fans, and greater cover and species richness were documented in fenced permanent plots than in control plots. The greatest effect of deer browsing to recovering dune vegetation was in total vegetation cover, which was significantly greater in fenced permanent plots. Any amaranth plants left open (i.e., un-exclosed) were often heavily browsed and experienced early onset mortality without reproducing. Since Hurricane Sandy, total vegetation cover in overwash fans has significantly increased each year, despite deer activity and a regional drought in 2016. While deer graze and browse vegetation in overwash fans, deer and humans trample vegetation in some overwash fans and separating effects of each is not possible from exclusion studies alone. Two overwash fans have been consistently impacted by coastal disturbances since Hurricane Sandy, further complicating their recoveries. Monitoring of dune vegetation should continue as communities transition from predominantly grasses to shrubs and forbs to assess effects of deer as palatability of vegetation improves.

New York↗